Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
01:52:00 (103947): wrapper (7.7.26015): starting
01:52:00 (103947): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 01:52:00] Arguments: --nthreads 12
[2024-05-17 01:52:00] Threads: 12
[2024-05-17 01:52:00] Checking for CVMFS
[2024-05-17 01:52:00] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 01:52:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 01:52:00] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 01:52:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 01:52:00] 2.9.2.0 165920 183153 125216 132831 3 60 23098959 45568000 4016 130560 0 620926409 99.780 414667260 14127 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-17 01:52:00] CVMFS is ok
[2024-05-17 01:52:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 01:52:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 01:52:00] Further information can be found at the LHC@home message board.
[2024-05-17 01:52:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 01:52:00] Checking for apptainer binary...
[2024-05-17 01:52:00] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 01:52:00] Running /usr/bin/apptainer --version
[2024-05-17 01:52:00] apptainer version 1.1.8-1.el7
[2024-05-17 01:52:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 01:52:01] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0038.triumf.lcg
[2024-05-17 01:52:01] apptainer works
[2024-05-17 01:52:01] Set ATHENA_PROC_NUMBER=12
[2024-05-17 01:52:01] Set ATHENA_CORE_NUMBER=12
[2024-05-17 01:52:01] Starting ATLAS job with PandaID=6207333059
[2024-05-17 01:52:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 02:42:03]  *** The last 200 lines of the pilot log: ***
[2024-05-17 02:42:03]  ddmendpoint=NDGF-T1_DATADISK
[2024-05-17 02:42:03]  direct_access_lan=False
[2024-05-17 02:42:03]  direct_access_wan=False
[2024-05-17 02:42:03]  domain=
[2024-05-17 02:42:03]  filesize=330312
[2024-05-17 02:42:03]  filetype=log
[2024-05-17 02:42:03]  guid=51768a09-00e0-421f-ad16-c9532d672998
[2024-05-17 02:42:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 02:42:03]  is_tar=False
[2024-05-17 02:42:03]  lfn=log.38776104._009597.job.log.tgz.1
[2024-05-17 02:42:03]  mtime=0
[2024-05-17 02:42:03]  protocol_id=None
[2024-05-17 02:42:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 02:42:03]  replicas=None
[2024-05-17 02:42:03]  scope=mc23_13p6TeV
[2024-05-17 02:42:03]  status=None
[2024-05-17 02:42:03]  status_code=0
[2024-05-17 02:42:03]  storage_token=
[2024-05-17 02:42:03]  surl=/home/boinc/slots/0/PanDA_Pilot-6207333059/log.38776104._009597.job.log.tgz.1
[2024-05-17 02:42:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/84/log.38776104._009597.job.log.tgz.1
[2024-05-17 02:42:03]  workdir=None
[2024-05-17 02:42:03] ]
[2024-05-17 02:42:03] 2024-05-17 09:41:36,284 | INFO     | transferring file log.38776104._009597.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6207333059/log.38776104._009597.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 02:42:03] 2024-05-17 09:41:36,285 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6207333059/log.38776104._009597.job.log.tgz.1 /home/boinc/slots/0/log.38776104._009597.job.log.t
[2024-05-17 02:42:03] 2024-05-17 09:41:36,344 | INFO     | adding to output.list: log.38776104._009597.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/84/log.38776104._009597.job.log.tg
[2024-05-17 02:42:03] 2024-05-17 09:41:36,345 | INFO     | summary of transferred files:
[2024-05-17 02:42:03] 2024-05-17 09:41:36,346 | INFO     |  -- lfn=log.38776104._009597.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 02:42:03] 2024-05-17 09:41:36,346 | INFO     | stage-out finished correctly
[2024-05-17 02:42:03] 2024-05-17 09:41:37,122 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 02:42:03] 2024-05-17 09:41:39,606 | INFO     | job 6207333059 has state=finished
[2024-05-17 02:42:03] 2024-05-17 09:41:39,607 | INFO     | preparing for final server update for job 6207333059 in state='finished'
[2024-05-17 02:42:03] 2024-05-17 09:41:39,607 | INFO     | this job has now completed (state=finished)
[2024-05-17 02:42:03] 2024-05-17 09:41:39,608 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 02:42:03] 2024-05-17 09:41:39,608 | INFO     | job 6207333059 has finished - writing final server update
[2024-05-17 02:42:03] 2024-05-17 09:41:39,608 | INFO     | total number of processed events: 400 (read)
[2024-05-17 02:42:03] 2024-05-17 09:41:39,615 | INFO     | executing command: lscpu
[2024-05-17 02:42:03] 2024-05-17 09:41:39,672 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 02:42:03] 2024-05-17 09:41:39,673 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 02:42:03] 2024-05-17 09:41:39,762 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 02:42:03] 2024-05-17 09:41:48,134 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 02:42:03] 2024-05-17 09:41:48,136 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6207333059/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 02:42:03] 2024-05-17 09:41:48,144 | INFO     | extracted standard info from prmon json
[2024-05-17 02:42:03] 2024-05-17 09:41:48,144 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 02:42:03] 2024-05-17 09:41:48,144 | WARNING  | GPU info not found in prmon json
[2024-05-17 02:42:03] 2024-05-17 09:41:48,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 02:42:03] 2024-05-17 09:41:48,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 02:42:03] 2024-05-17 09:41:48,148 | INFO     | fitting pss+swap vs Time
[2024-05-17 02:42:03] 2024-05-17 09:41:48,149 | INFO     | model: linear, x: [1715936286.0, 1715936347.0, 1715936408.0, 1715936469.0, 1715936530.0, 1715936591.0, 1715936652.0, 1715936713.0, 1715936774.0, 1715936835.0, 1715
[2024-05-17 02:42:03] 2024-05-17 09:41:48,149 | INFO     | sum of square deviations: 21358540.0
[2024-05-17 02:42:03] 2024-05-17 09:41:48,149 | INFO     | sum of deviations: 12917168094.000002
[2024-05-17 02:42:03] 2024-05-17 09:41:48,150 | INFO     | mean x: 1715937506.0
[2024-05-17 02:42:03] 2024-05-17 09:41:48,150 | INFO     | mean y: 2417027.536585366
[2024-05-17 02:42:03] 2024-05-17 09:41:48,150 | INFO     | -- intersect: -1037758272785.5844
[2024-05-17 02:42:03] 2024-05-17 09:41:48,150 | INFO     | intersect: -1037758272785.5844
[2024-05-17 02:42:03] 2024-05-17 09:41:48,151 | INFO     | chi2: 1.4416806965434878
[2024-05-17 02:42:03] 2024-05-17 09:41:48,151 | INFO     | -- intersect: -1037758272785.5844
[2024-05-17 02:42:03] 2024-05-17 09:41:48,151 | INFO     | current memory leak: 604.78 B/s (using 41 data points, chi2=1.44)
[2024-05-17 02:42:03] 2024-05-17 09:41:48,152 | INFO     | ..............................
[2024-05-17 02:42:03] 2024-05-17 09:41:48,153 | INFO     | . Timing measurements:
[2024-05-17 02:42:03] 2024-05-17 09:41:48,153 | INFO     | . get job = 0 s
[2024-05-17 02:42:03] 2024-05-17 09:41:48,153 | INFO     | . initial setup = 2 s
[2024-05-17 02:42:03] 2024-05-17 09:41:48,153 | INFO     | . payload setup = 10 s
[2024-05-17 02:42:03] 2024-05-17 09:41:48,153 | INFO     | . stage-in = 0 s
[2024-05-17 02:42:03] 2024-05-17 09:41:48,153 | INFO     | . payload execution = 2922 s
[2024-05-17 02:42:03] 2024-05-17 09:41:48,154 | INFO     | . stage-out = 0 s
[2024-05-17 02:42:03] 2024-05-17 09:41:48,154 | INFO     | . log creation = 0 s
[2024-05-17 02:42:03] 2024-05-17 09:41:48,154 | INFO     | ..............................
[2024-05-17 02:42:03] 2024-05-17 09:41:48,250 | INFO     | 
[2024-05-17 02:42:03] 2024-05-17 09:41:48,255 | WARNING  | process 133112 is no longer using CPU - aborting
[2024-05-17 02:42:03] 2024-05-17 09:41:48,255 | INFO     | job summary report
[2024-05-17 02:42:03] 2024-05-17 09:41:48,255 | INFO     | aborting job monitoring since job object (job id=6207333059) has expired
[2024-05-17 02:42:03] 2024-05-17 09:41:48,256 | INFO     | --------------------------------------------------
[2024-05-17 02:42:03] 2024-05-17 09:41:48,256 | INFO     | PanDA job id: 6207333059
[2024-05-17 02:42:03] 2024-05-17 09:41:48,256 | INFO     | task id: 38776104
[2024-05-17 02:42:03] 2024-05-17 09:41:48,256 | INFO     | errors: (none)
[2024-05-17 02:42:03] 2024-05-17 09:41:48,256 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 02:42:03] 2024-05-17 09:41:48,257 | INFO     | pilot state: finished 
[2024-05-17 02:42:03] 2024-05-17 09:41:48,257 | INFO     | transexitcode: 0
[2024-05-17 02:42:03] 2024-05-17 09:41:48,257 | INFO     | exeerrorcode: 0
[2024-05-17 02:42:03] 2024-05-17 09:41:48,257 | INFO     | exeerrordiag: 
[2024-05-17 02:42:03] 2024-05-17 09:41:48,257 | INFO     | exitcode: 0
[2024-05-17 02:42:03] 2024-05-17 09:41:48,257 | INFO     | exitmsg: OK
[2024-05-17 02:42:03] 2024-05-17 09:41:48,257 | INFO     | cpuconsumptiontime: 23946 s
[2024-05-17 02:42:03] 2024-05-17 09:41:48,257 | INFO     | nevents: 400
[2024-05-17 02:42:03] 2024-05-17 09:41:48,257 | INFO     | neventsw: 0
[2024-05-17 02:42:03] 2024-05-17 09:41:48,258 | INFO     | pid: 133112
[2024-05-17 02:42:03] 2024-05-17 09:41:48,258 | INFO     | pgrp: 133112
[2024-05-17 02:42:03] 2024-05-17 09:41:48,258 | INFO     | corecount: 12
[2024-05-17 02:42:03] 2024-05-17 09:41:48,258 | INFO     | event service: False
[2024-05-17 02:42:03] 2024-05-17 09:41:48,258 | INFO     | sizes: {0: 2392186, 1: 2392186, 9: 2392420, 11: 2392448, 2936: 2417788, 2937: 2426742, 2938: 2426926, 2949: 2427096}
[2024-05-17 02:42:03] 2024-05-17 09:41:48,258 | INFO     | --------------------------------------------------
[2024-05-17 02:42:03] 2024-05-17 09:41:48,258 | INFO     | 
[2024-05-17 02:42:03] 2024-05-17 09:41:48,258 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 02:42:03] 2024-05-17 09:41:48,309 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,310 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,310 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,310 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,310 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,310 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,312 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 02:42:03] 2024-05-17 09:41:48,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,312 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 02:42:03] 2024-05-17 09:41:48,312 | INFO     | job 6207333059 has completed (purged errors)
[2024-05-17 02:42:03] 2024-05-17 09:41:48,313 | INFO     | overall cleanup function is called
[2024-05-17 02:42:03] 2024-05-17 09:41:49,323 | INFO     | --- collectZombieJob: --- 10, [133112]
[2024-05-17 02:42:03] 2024-05-17 09:41:49,323 | INFO     | zombie collector waiting for pid 133112
[2024-05-17 02:42:03] 2024-05-17 09:41:49,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 02:42:03] 2024-05-17 09:41:50,330 | INFO     | collected zombie processes
[2024-05-17 02:42:03] 2024-05-17 09:41:50,330 | INFO     | will now attempt to kill all subprocesses of pid=133112
[2024-05-17 02:42:03] 2024-05-17 09:41:50,477 | INFO     | process IDs to be killed: [133112] (in reverse order)
[2024-05-17 02:42:03] 2024-05-17 09:41:50,630 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 02:42:03] 2024-05-17 09:41:50,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 02:42:03] 2024-05-17 09:41:50,638 | INFO     | did not find any defunct processes belonging to 133112
[2024-05-17 02:42:03] 2024-05-17 09:41:50,645 | INFO     | did not find any defunct processes belonging to 133112
[2024-05-17 02:42:03] 2024-05-17 09:41:50,645 | INFO     | ready for new job
[2024-05-17 02:42:03] 2024-05-17 09:41:50,645 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 02:42:03] 2024-05-17 09:41:50,647 | INFO     | *************************************
[2024-05-17 02:42:03] 2024-05-17 09:41:50,647 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 02:42:03] 2024-05-17 09:41:50,647 | INFO     | *************************************
[2024-05-17 02:42:03] 2024-05-17 09:41:50,647 | INFO     | 
[2024-05-17 02:42:03] 2024-05-17 09:41:50,651 | INFO     | architecture information:
[2024-05-17 02:42:03] 2024-05-17 09:41:50,652 | INFO     | executing command: cat /etc/os-release
[2024-05-17 02:42:03] 2024-05-17 09:41:50,688 | INFO     | cat /etc/os-release:
[2024-05-17 02:42:03] NAME="CentOS Linux"
[2024-05-17 02:42:03] VERSION="7 (Core)"
[2024-05-17 02:42:03] ID="centos"
[2024-05-17 02:42:03] ID_LIKE="rhel fedora"
[2024-05-17 02:42:03] VERSION_ID="7"
[2024-05-17 02:42:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 02:42:03] ANSI_COLOR="0;31"
[2024-05-17 02:42:03] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 02:42:03] HOME_URL="https://www.centos.org/"
[2024-05-17 02:42:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 02:42:03] 
[2024-05-17 02:42:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 02:42:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 02:42:03] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 02:42:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 02:42:03] 
[2024-05-17 02:42:03] 2024-05-17 09:41:50,689 | INFO     | *************************************
[2024-05-17 02:42:03] 2024-05-17 09:41:51,193 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 02:42:03] 2024-05-17 09:41:51,241 | INFO     | sufficient remaining disk space (2128527491072 B)
[2024-05-17 02:42:03] 2024-05-17 09:41:51,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 02:42:03] 2024-05-17 09:41:51,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 02:42:03] 2024-05-17 09:41:51,242 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 02:42:03] 2024-05-17 09:41:51,243 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 02:42:03] 2024-05-17 09:41:51,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 02:42:03] 2024-05-17 09:41:51,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 02:42:03] 2024-05-17 09:41:51,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 02:42:03] 2024-05-17 09:41:51,765 | INFO     | aborting loop
[2024-05-17 02:42:03] 2024-05-17 09:41:51,781 | INFO     | all data control threads have been joined
[2024-05-17 02:42:03] 2024-05-17 09:41:51,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 02:42:03] 2024-05-17 09:41:52,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 02:42:03] 2024-05-17 09:41:52,248 | INFO     | [job] retrieve thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:52,450 | INFO     | [payload] validate_post thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:52,492 | INFO     | all payload control threads have been joined
[2024-05-17 02:42:03] 2024-05-17 09:41:52,611 | INFO     | [payload] failed_post thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:52,771 | INFO     | [job] job monitor thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:52,789 | INFO     | [data] control thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:52,882 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:52,910 | INFO     | all job control threads have been joined
[2024-05-17 02:42:03] 2024-05-17 09:41:53,259 | INFO     | [job] validate thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:53,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 02:42:03] 2024-05-17 09:41:53,321 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:53,371 | INFO     | [data] copytool_in thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:53,423 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:53,498 | INFO     | [payload] control thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:53,613 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:53,916 | INFO     | [job] control thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:53,970 | INFO     | [data] copytool_out thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:54,274 | INFO     | [job] queue monitor thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:56,231 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 02:42:03] 2024-05-17 09:41:57,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140694883374912)>', '<ExcThread(monitor, started 140694328960768)>']
[2024-05-17 02:42:03] 2024-05-17 09:41:57,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 02:42:03] 2024-05-17 09:41:57,274 | INFO     | [monitor] control thread has ended
[2024-05-17 02:42:03] 2024-05-17 09:42:02,139 | INFO     | all workflow threads have been joined
[2024-05-17 02:42:03] 2024-05-17 09:42:02,140 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 02:42:03] 2024-05-17 09:42:02,140 | INFO     | traces error code: 0
[2024-05-17 02:42:03] 2024-05-17 09:42:02,141 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 02:42:03] 2024-05-17 09:42:02,243 [wrapper] ==== pilot stdout END ====
[2024-05-17 02:42:03] 2024-05-17 09:42:02,257 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 02:42:03] 2024-05-17 09:42:02,268 [wrapper] pilotpid: 114356
[2024-05-17 02:42:03] 2024-05-17 09:42:02,279 [wrapper] Pilot exit status: 0
[2024-05-17 02:42:03] 2024-05-17 09:42:02,305 [wrapper] pandaids: 6207333059
[2024-05-17 02:42:03] 2024-05-17 09:42:02,354 [wrapper] cleanup: SIGTERM to supervisor_pilot  50872 114357
[2024-05-17 02:42:03] 2024-05-17 09:42:02,367 [wrapper] Test setup, not cleaning
[2024-05-17 02:42:03] 2024-05-17 09:42:02,379 [wrapper] ==== wrapper stdout END ====
[2024-05-17 02:42:03] 2024-05-17 09:42:02,386 [wrapper] ==== wrapper stderr END ====
[2024-05-17 02:42:03] 2024-05-17 09:42:02,413 [wrapper] apfmon messages muted
[2024-05-17 02:42:03]  *** Error codes and diagnostics ***
[2024-05-17 02:42:03]     "exeErrorCode": 0,
[2024-05-17 02:42:03]     "exeErrorDiag": "",
[2024-05-17 02:42:03]     "pilotErrorCode": 0,
[2024-05-17 02:42:03]     "pilotErrorDiag": "",
[2024-05-17 02:42:03]  *** Listing of results directory ***
[2024-05-17 02:42:03] total 816712
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc    467845 May 16 03:30 pilot3.tar.gz
[2024-05-17 02:42:03] -rwx------ 1 boinc boinc     32251 May 16 03:43 runpilot2-wrapper.sh
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc      5633 May 16 03:43 queuedata.json
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc       100 May 17 01:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 02:42:03] -rwxr-xr-x 1 boinc boinc      7986 May 17 01:51 run_atlas
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc       105 May 17 01:51 job.xml
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc      6627 May 17 01:52 init_data.xml
[2024-05-17 02:42:03] -rw-r--r-- 2 boinc boinc 601275885 May 17 01:52 EVNT.38776100._000024.pool.root.1
[2024-05-17 02:42:03] -rw-r--r-- 2 boinc boinc     17537 May 17 01:52 start_atlas.sh
[2024-05-17 02:42:03] drwxrwx--x 2 boinc boinc      4096 May 17 01:52 shared
[2024-05-17 02:42:03] -rw-r--r-- 2 boinc boinc    479998 May 17 01:52 input.tar.gz
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc         0 May 17 01:52 boinc_lockfile
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc      2634 May 17 01:52 pandaJob.out
[2024-05-17 02:42:03] -rw------- 1 boinc boinc       424 May 17 01:52 setup.sh.local
[2024-05-17 02:42:03] -rw------- 1 boinc boinc   1019364 May 17 01:52 agis_schedconf.cvmfs.json
[2024-05-17 02:42:03] -rw------- 1 boinc boinc         0 May 17 01:52 agis_ddmendpoints.agis.ALL.json
[2024-05-17 02:42:03] -rw------- 1 boinc boinc   1324701 May 17 01:52 cric_ddmendpoints.json
[2024-05-17 02:42:03] drwx------ 4 boinc boinc      4096 May 17 01:52 pilot3
[2024-05-17 02:42:03] -rw------- 1 boinc boinc 230212604 May 17 02:41 HITS.38776104._009597.pool.root.1
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc       530 May 17 02:41 boinc_task_state.xml
[2024-05-17 02:42:03] -rw------- 1 boinc boinc        95 May 17 02:41 pilot_heartbeat.json
[2024-05-17 02:42:03] -rw------- 1 boinc boinc      1042 May 17 02:41 memory_monitor_summary.json
[2024-05-17 02:42:03] -rw------- 1 boinc boinc    330312 May 17 02:41 log.38776104._009597.job.log.tgz.1
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc        27 May 17 02:41 wrapper_checkpoint.txt
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc      8192 May 17 02:41 boinc_mmap_file
[2024-05-17 02:42:03] -rw------- 1 boinc boinc      7748 May 17 02:41 heartbeat.json
[2024-05-17 02:42:03] -rw------- 1 boinc boinc      4333 May 17 02:42 pilotlog.txt
[2024-05-17 02:42:03] -rw------- 1 boinc boinc    313462 May 17 02:42 log.38776104._009597.job.log.1
[2024-05-17 02:42:03] -rw------- 1 boinc boinc       357 May 17 02:42 output.list
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc       620 May 17 02:42 runtime_log
[2024-05-17 02:42:03] -rw------- 1 boinc boinc    665600 May 17 02:42 result.tar.gz
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc     11286 May 17 02:42 runtime_log.err
[2024-05-17 02:42:03] -rw------- 1 boinc boinc       655 May 17 02:42 DmXLDmClnR5nsSi4apGgGQJmABFKDmABFKDm4ySLDm3WPKDmXZWOpm.diag
[2024-05-17 02:42:03] -rw-r--r-- 1 boinc boinc     21323 May 17 02:42 stderr.txt
[2024-05-17 02:42:03] HITS file was successfully produced:
[2024-05-17 02:42:03] -rw------- 1 boinc boinc 230212604 May 17 02:41 shared/HITS.pool.root.1
[2024-05-17 02:42:03]  *** Contents of shared directory: ***
[2024-05-17 02:42:03] total 813156
[2024-05-17 02:42:03] -rw-r--r-- 2 boinc boinc 601275885 May 17 01:52 ATLAS.root_0
[2024-05-17 02:42:03] -rw-r--r-- 2 boinc boinc     17537 May 17 01:52 start_atlas.sh
[2024-05-17 02:42:03] -rw-r--r-- 2 boinc boinc    479998 May 17 01:52 input.tar.gz
[2024-05-17 02:42:03] -rw------- 1 boinc boinc 230212604 May 17 02:41 HITS.pool.root.1
[2024-05-17 02:42:03] -rw------- 1 boinc boinc    665600 May 17 02:42 result.tar.gz
02:42:05 (103947): run_atlas exited; CPU time 23844.996157
02:42:05 (103947): called boinc_finish(0)

</stderr_txt>
]]>

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