Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:13:50 (3047530): wrapper (7.7.26015): starting
00:13:50 (3047530): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 00:13:50] Arguments: --nthreads 12
[2024-05-18 00:13:50] Threads: 12
[2024-05-18 00:13:50] Checking for CVMFS
[2024-05-18 00:13:50] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 00:13:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 00:13:50] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 00:13:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 00:13:50] 2.11.3.0 11199 12265 104728 132856 1 56 43038673 46080001 867 130560 0 15251802 99.951 1927063 35667 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2024-05-18 00:13:50] CVMFS is ok
[2024-05-18 00:13:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 00:13:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 00:13:50] Further information can be found at the LHC@home message board.
[2024-05-18 00:13:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 00:13:50] Checking for apptainer binary...
[2024-05-18 00:13:50] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 00:13:50] Running /usr/bin/apptainer --version
[2024-05-18 00:13:50] apptainer version 1.3.1-1.el7
[2024-05-18 00:13:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 00:13:50] minis01.farm.particle.cz
[2024-05-18 00:13:50] apptainer works
[2024-05-18 00:13:50] Set ATHENA_PROC_NUMBER=12
[2024-05-18 00:13:50] Set ATHENA_CORE_NUMBER=12
[2024-05-18 00:13:50] Starting ATLAS job with PandaID=6207307511
[2024-05-18 00:13:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 01:26:09]  *** The last 200 lines of the pilot log: ***
[2024-05-18 01:26:09]  filetype=log
[2024-05-18 01:26:09]  guid=8401d24e-ac0e-49f8-b5f4-6a68de7c6e87
[2024-05-18 01:26:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 01:26:09]  is_tar=False
[2024-05-18 01:26:09]  lfn=log.38776125._013511.job.log.tgz.1
[2024-05-18 01:26:09]  mtime=0
[2024-05-18 01:26:09]  protocol_id=None
[2024-05-18 01:26:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 01:26:09]  replicas=None
[2024-05-18 01:26:09]  scope=mc23_13p6TeV
[2024-05-18 01:26:09]  status=None
[2024-05-18 01:26:09]  status_code=0
[2024-05-18 01:26:09]  storage_token=
[2024-05-18 01:26:09]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6207307511/log.38776125._013511.job.log.tgz.1
[2024-05-18 01:26:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/4b/log.38776125._013511.job.log.tgz.1
[2024-05-18 01:26:09]  workdir=None
[2024-05-18 01:26:09] ]
[2024-05-18 01:26:09] 2024-05-17 23:25:41,071 | INFO     | transferring file log.38776125._013511.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6207307511/log.38776125._013511.job.log.tgz.1 to /scratch/.boinc/slot
[2024-05-18 01:26:09] 2024-05-17 23:25:41,071 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6207307511/log.38776125._013511.job.log.tgz.1 /scratch/.boinc/slots/1/log.38776125._013511.j
[2024-05-18 01:26:09] 2024-05-17 23:25:41,096 | INFO     | adding to output.list: log.38776125._013511.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/4b/log.38776125._013511.job.log.tg
[2024-05-18 01:26:09] 2024-05-17 23:25:41,096 | INFO     | summary of transferred files:
[2024-05-18 01:26:09] 2024-05-17 23:25:41,096 | INFO     |  -- lfn=log.38776125._013511.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 01:26:09] 2024-05-17 23:25:41,096 | INFO     | stage-out finished correctly
[2024-05-18 01:26:09] 2024-05-17 23:25:42,241 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 01:26:09] 2024-05-17 23:25:43,376 | WARNING  | process 3058708 is no longer using CPU - aborting
[2024-05-18 01:26:09] 2024-05-17 23:25:43,376 | INFO     | will not send any job update
[2024-05-18 01:26:09] 2024-05-17 23:25:44,707 | INFO     | job 6207307511 has state=finished
[2024-05-18 01:26:09] 2024-05-17 23:25:44,707 | INFO     | preparing for final server update for job 6207307511 in state='finished'
[2024-05-18 01:26:09] 2024-05-17 23:25:45,296 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-05-18 01:26:09] 2024-05-17 23:25:45,297 | INFO     | this job has now completed (state=finished)
[2024-05-18 01:26:09] 2024-05-17 23:25:45,297 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 01:26:09] 2024-05-17 23:25:45,297 | INFO     | job 6207307511 has finished - writing final server update
[2024-05-18 01:26:09] 2024-05-17 23:25:45,298 | INFO     | total number of processed events: 400 (read)
[2024-05-18 01:26:09] 2024-05-17 23:25:45,302 | INFO     | executing command: lscpu
[2024-05-18 01:26:09] 2024-05-17 23:25:45,332 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-05-18 01:26:09] 2024-05-17 23:25:45,333 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 01:26:09] 2024-05-17 23:25:45,381 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 01:26:09] 2024-05-17 23:25:45,879 | INFO     | monitor loop #340: job 0:6207307511 is in state 'finished'
[2024-05-18 01:26:09] 2024-05-17 23:25:45,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 01:26:09] 2024-05-17 23:25:48,383 | INFO     | monitor loop #341: job 0:6207307511 is in state 'finished'
[2024-05-18 01:26:09] 2024-05-17 23:25:48,383 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 01:26:09] 2024-05-17 23:25:50,494 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-18 01:26:09] 2024-05-17 23:25:50,495 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6207307511/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 01:26:09] 2024-05-17 23:25:50,496 | INFO     | extracted standard info from prmon json
[2024-05-18 01:26:09] 2024-05-17 23:25:50,496 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 01:26:09] 2024-05-17 23:25:50,497 | WARNING  | GPU info not found in prmon json
[2024-05-18 01:26:09] 2024-05-17 23:25:50,497 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 01:26:09] 2024-05-17 23:25:50,497 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 01:26:09] 2024-05-17 23:25:50,500 | INFO     | fitting pss+swap vs Time
[2024-05-18 01:26:09] 2024-05-17 23:25:50,500 | INFO     | model: linear, x: [1715984378.0, 1715984439.0, 1715984500.0, 1715984561.0, 1715984622.0, 1715984683.0, 1715984744.0, 1715984805.0, 1715984866.0, 1715984927.0, 1715
[2024-05-18 01:26:09] 2024-05-17 23:25:50,501 | INFO     | sum of square deviations: 77515872.0
[2024-05-18 01:26:09] 2024-05-17 23:25:50,501 | INFO     | sum of deviations: 13934423003.999998
[2024-05-18 01:26:09] 2024-05-17 23:25:50,501 | INFO     | mean x: 1715986269.0
[2024-05-18 01:26:09] 2024-05-17 23:25:50,501 | INFO     | mean y: 2676613.0634920634
[2024-05-18 01:26:09] 2024-05-17 23:25:50,502 | INFO     | -- intersect: -308466775182.58594
[2024-05-18 01:26:09] 2024-05-17 23:25:50,502 | INFO     | intersect: -308466775182.58594
[2024-05-18 01:26:09] 2024-05-17 23:25:50,502 | INFO     | chi2: 1.8809637269739827
[2024-05-18 01:26:09] 2024-05-17 23:25:50,502 | INFO     | -- intersect: -308466775182.58594
[2024-05-18 01:26:09] 2024-05-17 23:25:50,502 | INFO     | current memory leak: 179.76 B/s (using 63 data points, chi2=1.88)
[2024-05-18 01:26:09] 2024-05-17 23:25:50,503 | INFO     | ..............................
[2024-05-18 01:26:09] 2024-05-17 23:25:50,503 | INFO     | . Timing measurements:
[2024-05-18 01:26:09] 2024-05-17 23:25:50,503 | INFO     | . get job = 0 s
[2024-05-18 01:26:09] 2024-05-17 23:25:50,503 | INFO     | . initial setup = 1 s
[2024-05-18 01:26:09] 2024-05-17 23:25:50,504 | INFO     | . payload setup = 7 s
[2024-05-18 01:26:09] 2024-05-17 23:25:50,504 | INFO     | . stage-in = 0 s
[2024-05-18 01:26:09] 2024-05-17 23:25:50,504 | INFO     | . payload execution = 4269 s
[2024-05-18 01:26:09] 2024-05-17 23:25:50,504 | INFO     | . stage-out = 0 s
[2024-05-18 01:26:09] 2024-05-17 23:25:50,504 | INFO     | . log creation = 0 s
[2024-05-18 01:26:09] 2024-05-17 23:25:50,504 | INFO     | ..............................
[2024-05-18 01:26:09] 2024-05-17 23:25:50,754 | INFO     | 
[2024-05-18 01:26:09] 2024-05-17 23:25:50,754 | INFO     | job summary report
[2024-05-18 01:26:09] 2024-05-17 23:25:50,754 | INFO     | --------------------------------------------------
[2024-05-18 01:26:09] 2024-05-17 23:25:50,754 | INFO     | PanDA job id: 6207307511
[2024-05-18 01:26:09] 2024-05-17 23:25:50,755 | INFO     | task id: 38776125
[2024-05-18 01:26:09] 2024-05-17 23:25:50,755 | INFO     | errors: (none)
[2024-05-18 01:26:09] 2024-05-17 23:25:50,755 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 01:26:09] 2024-05-17 23:25:50,755 | INFO     | pilot state: finished 
[2024-05-18 01:26:09] 2024-05-17 23:25:50,755 | INFO     | transexitcode: 0
[2024-05-18 01:26:09] 2024-05-17 23:25:50,755 | INFO     | exeerrorcode: 0
[2024-05-18 01:26:09] 2024-05-17 23:25:50,755 | INFO     | exeerrordiag: 
[2024-05-18 01:26:09] 2024-05-17 23:25:50,756 | INFO     | exitcode: 0
[2024-05-18 01:26:09] 2024-05-17 23:25:50,756 | INFO     | exitmsg: OK
[2024-05-18 01:26:09] 2024-05-17 23:25:50,756 | INFO     | cpuconsumptiontime: 41597 s
[2024-05-18 01:26:09] 2024-05-17 23:25:50,756 | INFO     | nevents: 400
[2024-05-18 01:26:09] 2024-05-17 23:25:50,756 | INFO     | neventsw: 0
[2024-05-18 01:26:09] 2024-05-17 23:25:50,756 | INFO     | pid: 3058708
[2024-05-18 01:26:09] 2024-05-17 23:25:50,756 | INFO     | pgrp: 3058708
[2024-05-18 01:26:09] 2024-05-17 23:25:50,757 | INFO     | corecount: 12
[2024-05-18 01:26:09] 2024-05-17 23:25:50,757 | INFO     | event service: False
[2024-05-18 01:26:09] 2024-05-17 23:25:50,757 | INFO     | sizes: {0: 2392195, 6: 2392401, 11: 2392429, 4280: 2418458, 4281: 2427420, 4283: 2427476, 4291: 2427774}
[2024-05-18 01:26:09] 2024-05-17 23:25:50,757 | INFO     | --------------------------------------------------
[2024-05-18 01:26:09] 2024-05-17 23:25:50,757 | INFO     | 
[2024-05-18 01:26:09] 2024-05-17 23:25:50,757 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2024-05-18 01:26:09] 2024-05-17 23:25:50,780 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,781 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,781 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,781 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,781 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,781 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,782 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,782 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,782 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,782 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,782 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,783 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,783 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,783 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,783 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,783 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 01:26:09] 2024-05-17 23:25:50,783 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,784 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 01:26:09] 2024-05-17 23:25:50,784 | INFO     | job 6207307511 has completed (purged errors)
[2024-05-18 01:26:09] 2024-05-17 23:25:50,784 | INFO     | overall cleanup function is called
[2024-05-18 01:26:09] 2024-05-17 23:25:51,793 | INFO     | --- collectZombieJob: --- 10, [3058708]
[2024-05-18 01:26:09] 2024-05-17 23:25:51,793 | INFO     | zombie collector waiting for pid 3058708
[2024-05-18 01:26:09] 2024-05-17 23:25:51,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 01:26:09] 2024-05-17 23:25:52,798 | INFO     | collected zombie processes
[2024-05-18 01:26:09] 2024-05-17 23:25:52,799 | INFO     | will now attempt to kill all subprocesses of pid=3058708
[2024-05-18 01:26:09] 2024-05-17 23:25:52,913 | INFO     | process IDs to be killed: [3058708] (in reverse order)
[2024-05-18 01:26:09] 2024-05-17 23:25:52,980 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 01:26:09] 2024-05-17 23:25:52,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 01:26:09] 2024-05-17 23:25:52,984 | INFO     | did not find any defunct processes belonging to 3058708
[2024-05-18 01:26:09] 2024-05-17 23:25:52,988 | INFO     | did not find any defunct processes belonging to 3058708
[2024-05-18 01:26:09] 2024-05-17 23:25:52,988 | INFO     | ready for new job
[2024-05-18 01:26:09] 2024-05-17 23:25:52,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 01:26:09] 2024-05-17 23:25:52,989 | INFO     | *************************************
[2024-05-18 01:26:09] 2024-05-17 23:25:52,989 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 01:26:09] 2024-05-17 23:25:52,989 | INFO     | *************************************
[2024-05-18 01:26:09] 2024-05-17 23:25:52,989 | INFO     | 
[2024-05-18 01:26:09] 2024-05-17 23:25:52,990 | INFO     | architecture information:
[2024-05-18 01:26:09] 2024-05-17 23:25:52,991 | INFO     | executing command: cat /etc/os-release
[2024-05-18 01:26:09] 2024-05-17 23:25:53,009 | INFO     | cat /etc/os-release:
[2024-05-18 01:26:09] NAME="CentOS Linux"
[2024-05-18 01:26:09] VERSION="7 (Core)"
[2024-05-18 01:26:09] ID="centos"
[2024-05-18 01:26:09] ID_LIKE="rhel fedora"
[2024-05-18 01:26:09] VERSION_ID="7"
[2024-05-18 01:26:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 01:26:09] ANSI_COLOR="0;31"
[2024-05-18 01:26:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 01:26:09] HOME_URL="https://www.centos.org/"
[2024-05-18 01:26:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 01:26:09] 
[2024-05-18 01:26:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 01:26:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 01:26:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 01:26:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 01:26:09] 
[2024-05-18 01:26:09] 2024-05-17 23:25:53,009 | INFO     | *************************************
[2024-05-18 01:26:09] 2024-05-17 23:25:53,512 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2024-05-18 01:26:09] 2024-05-17 23:25:53,535 | INFO     | sufficient remaining disk space (709202280448 B)
[2024-05-18 01:26:09] 2024-05-17 23:25:53,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 01:26:09] 2024-05-17 23:25:53,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 01:26:09] 2024-05-17 23:25:53,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 01:26:09] 2024-05-17 23:25:54,015 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 01:26:09] 2024-05-17 23:25:54,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 01:26:09] 2024-05-17 23:25:54,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 01:26:09] 2024-05-17 23:25:54,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 01:26:09] 2024-05-17 23:25:54,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 01:26:09] 2024-05-17 23:25:54,399 | INFO     | aborting loop
[2024-05-18 01:26:09] 2024-05-17 23:25:54,502 | INFO     | all data control threads have been joined
[2024-05-18 01:26:09] 2024-05-17 23:25:54,541 | INFO     | [job] retrieve thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:54,642 | INFO     | all job control threads have been joined
[2024-05-18 01:26:09] 2024-05-17 23:25:54,690 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:54,812 | INFO     | all payload control threads have been joined
[2024-05-18 01:26:09] 2024-05-17 23:25:54,835 | INFO     | [data] copytool_in thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:54,953 | INFO     | [job] validate thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:55,214 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:55,385 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:55,405 | INFO     | [job] job monitor thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:55,508 | INFO     | [data] control thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:55,647 | INFO     | [job] control thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:55,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 01:26:09] 2024-05-17 23:25:55,710 | INFO     | [payload] validate_post thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:55,818 | INFO     | [payload] control thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:55,915 | INFO     | [payload] failed_post thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:56,187 | INFO     | [data] copytool_out thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:56,659 | INFO     | [job] queue monitor thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:25:57,543 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:26:03,619 | INFO     | job.realtimelogging is not enabled
[2024-05-18 01:26:09] 2024-05-17 23:26:04,624 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 01:26:09] 2024-05-17 23:26:04,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467453019968)>', '<ExcThread(monitor, started 140466905413376)>']
[2024-05-18 01:26:09] 2024-05-17 23:26:05,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 01:26:09] 2024-05-17 23:26:05,072 | INFO     | [monitor] control thread has ended
[2024-05-18 01:26:09] 2024-05-17 23:26:09,732 | INFO     | all workflow threads have been joined
[2024-05-18 01:26:09] 2024-05-17 23:26:09,732 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 01:26:09] 2024-05-17 23:26:09,733 | INFO     | traces error code: 0
[2024-05-18 01:26:09] 2024-05-17 23:26:09,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 01:26:09] 2024-05-17 23:26:09,814 [wrapper] ==== pilot stdout END ====
[2024-05-18 01:26:09] 2024-05-17 23:26:09,818 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 01:26:09] 2024-05-17 23:26:09,821 [wrapper] pilotpid: 3051926
[2024-05-18 01:26:09] 2024-05-17 23:26:09,824 [wrapper] Pilot exit status: 0
[2024-05-18 01:26:09] 2024-05-17 23:26:09,837 [wrapper] pandaids: 6207307511
[2024-05-18 01:26:09] 2024-05-17 23:26:09,874 [wrapper] cleanup: SIGTERM to supervisor_pilot 3108702 3051927
[2024-05-18 01:26:09] 2024-05-17 23:26:09,878 [wrapper] Test setup, not cleaning
[2024-05-18 01:26:09] 2024-05-17 23:26:09,881 [wrapper] ==== wrapper stdout END ====
[2024-05-18 01:26:09] 2024-05-17 23:26:09,885 [wrapper] ==== wrapper stderr END ====
[2024-05-18 01:26:09] 2024-05-17 23:26:09,891 [wrapper] apfmon messages muted
[2024-05-18 01:26:09]  *** Error codes and diagnostics ***
[2024-05-18 01:26:09]     "exeErrorCode": 0,
[2024-05-18 01:26:09]     "exeErrorDiag": "",
[2024-05-18 01:26:09]     "pilotErrorCode": 0,
[2024-05-18 01:26:09]     "pilotErrorDiag": "",
[2024-05-18 01:26:09]  *** Listing of results directory ***
[2024-05-18 01:26:10] total 827816
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc    467845 May 16 09:45 pilot3.tar.gz
[2024-05-18 01:26:10] -rwx------ 1 boinc boinc     32251 May 16 10:16 runpilot2-wrapper.sh
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc      5633 May 16 10:16 queuedata.json
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc       100 May 18 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 01:26:10] -rwxr-xr-x 1 boinc boinc      7986 May 18 00:13 run_atlas
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc       105 May 18 00:13 job.xml
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc      6528 May 18 00:13 init_data.xml
[2024-05-18 01:26:10] -rw-r--r-- 2 boinc boinc 601267775 May 18 00:13 EVNT.38776119._000363.pool.root.1
[2024-05-18 01:26:10] -rw-r--r-- 2 boinc boinc     17537 May 18 00:13 start_atlas.sh
[2024-05-18 01:26:10] drwxrwx--x 2 boinc boinc      4096 May 18 00:13 shared
[2024-05-18 01:26:10] -rw-r--r-- 2 boinc boinc    480010 May 18 00:13 input.tar.gz
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc         0 May 18 00:13 boinc_lockfile
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc      2633 May 18 00:13 pandaJob.out
[2024-05-18 01:26:10] -rw------- 1 boinc boinc       424 May 18 00:13 setup.sh.local
[2024-05-18 01:26:10] -rw------- 1 boinc boinc   1019089 May 18 00:14 agis_schedconf.cvmfs.json
[2024-05-18 01:26:10] -rw------- 1 boinc boinc         0 May 18 00:14 agis_ddmendpoints.agis.ALL.json
[2024-05-18 01:26:10] -rw------- 1 boinc boinc   1324701 May 18 00:14 cric_ddmendpoints.json
[2024-05-18 01:26:10] drwx------ 4 boinc boinc      4096 May 18 00:14 pilot3
[2024-05-18 01:26:10] -rw------- 1 boinc boinc 241266620 May 18 01:25 HITS.38776125._013511.pool.root.1
[2024-05-18 01:26:10] -rw------- 1 boinc boinc        95 May 18 01:25 pilot_heartbeat.json
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc       530 May 18 01:25 boinc_task_state.xml
[2024-05-18 01:26:10] -rw------- 1 boinc boinc      1033 May 18 01:25 memory_monitor_summary.json
[2024-05-18 01:26:10] -rw------- 1 boinc boinc    366225 May 18 01:25 log.38776125._013511.job.log.tgz.1
[2024-05-18 01:26:10] -rw------- 1 boinc boinc      7715 May 18 01:25 heartbeat.json
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc        27 May 18 01:25 wrapper_checkpoint.txt
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc      8192 May 18 01:25 boinc_mmap_file
[2024-05-18 01:26:10] -rw------- 1 boinc boinc      4285 May 18 01:26 pilotlog.txt
[2024-05-18 01:26:10] -rw------- 1 boinc boinc    439754 May 18 01:26 log.38776125._013511.job.log.1
[2024-05-18 01:26:10] -rw------- 1 boinc boinc       357 May 18 01:26 output.list
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc       620 May 18 01:26 runtime_log
[2024-05-18 01:26:10] -rw------- 1 boinc boinc    829440 May 18 01:26 result.tar.gz
[2024-05-18 01:26:10] -rw------- 1 boinc boinc       659 May 18 01:26 TLHNDmxSlR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmAGKKDmd7e67m.diag
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc     11064 May 18 01:26 runtime_log.err
[2024-05-18 01:26:10] -rw-r--r-- 1 boinc boinc     21360 May 18 01:26 stderr.txt
[2024-05-18 01:26:10] HITS file was successfully produced:
[2024-05-18 01:26:10] -rw------- 1 boinc boinc 241266620 May 18 01:25 shared/HITS.pool.root.1
[2024-05-18 01:26:10]  *** Contents of shared directory: ***
[2024-05-18 01:26:10] total 824100
[2024-05-18 01:26:10] -rw-r--r-- 2 boinc boinc 601267775 May 18 00:13 ATLAS.root_0
[2024-05-18 01:26:10] -rw-r--r-- 2 boinc boinc     17537 May 18 00:13 start_atlas.sh
[2024-05-18 01:26:10] -rw-r--r-- 2 boinc boinc    480010 May 18 00:13 input.tar.gz
[2024-05-18 01:26:10] -rw------- 1 boinc boinc 241266620 May 18 01:25 HITS.pool.root.1
[2024-05-18 01:26:10] -rw------- 1 boinc boinc    829440 May 18 01:26 result.tar.gz
01:26:11 (3047530): run_atlas exited; CPU time 41298.926744
01:26:11 (3047530): called boinc_finish(0)

</stderr_txt>
]]>

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