Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:14:11 (1435499): wrapper (7.7.26015): starting
17:14:11 (1435499): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 17:14:11] Arguments: --nthreads 4
[2024-05-18 17:14:11] Threads: 4
[2024-05-18 17:14:11] Checking for CVMFS
[2024-05-18 17:14:11] No cvmfs_config command found, will try listing directly
[2024-05-18 17:14:11] CVMFS is ok
[2024-05-18 17:14:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 17:14:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 17:14:11] Further information can be found at the LHC@home message board.
[2024-05-18 17:14:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 17:14:11] Checking for apptainer binary...
[2024-05-18 17:14:11] which: no apptainer in ((null))
[2024-05-18 17:14:11] apptainer is not installed, using version from CVMFS
[2024-05-18 17:14:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 17:14:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-05-18 17:14:12] apptainer works
[2024-05-18 17:14:12] Set ATHENA_PROC_NUMBER=4
[2024-05-18 17:14:12] Set ATHENA_CORE_NUMBER=4
[2024-05-18 17:14:12] Starting ATLAS job with PandaID=6207276963
[2024-05-18 17:14:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 19:30:50]  *** The last 200 lines of the pilot log: ***
[2024-05-18 19:30:50] 2024-05-18 17:30:28,575 | INFO     | sum of deviations: 32193759824.500004
[2024-05-18 19:30:50] 2024-05-18 17:30:28,575 | INFO     | mean x: 1716049345.5
[2024-05-18 19:30:50] 2024-05-18 17:30:28,575 | INFO     | mean y: 2279718.425373134
[2024-05-18 19:30:50] 2024-05-18 17:30:28,576 | INFO     | -- intersect: -74049046331.51025
[2024-05-18 19:30:50] 2024-05-18 17:30:28,576 | INFO     | intersect: -74049046331.51025
[2024-05-18 19:30:50] 2024-05-18 17:30:28,576 | INFO     | chi2: 4.4733339603561415
[2024-05-18 19:30:50] 2024-05-18 17:30:28,576 | INFO     | model: linear, x: [1716045289.0, 1716045350.0, 1716045411.0, 1716045472.0, 1716045533.0, 1716045594.0, 1716045655.0, 1716045716.0, 1716045777.0, 1716045838.0, 1716
[2024-05-18 19:30:50] 2024-05-18 17:30:28,576 | INFO     | sum of square deviations: 665612480.0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,576 | INFO     | sum of deviations: 39273333784.000015
[2024-05-18 19:30:50] 2024-05-18 17:30:28,576 | INFO     | mean x: 1716049193.0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,576 | INFO     | mean y: 2292659.8759689922
[2024-05-18 19:30:50] 2024-05-18 17:30:28,576 | INFO     | -- intersect: -101250275120.18257
[2024-05-18 19:30:50] 2024-05-18 17:30:28,577 | INFO     | intersect: -101250275120.18257
[2024-05-18 19:30:50] 2024-05-18 17:30:28,577 | INFO     | chi2: 3.716080379802229
[2024-05-18 19:30:50] 2024-05-18 17:30:28,577 | INFO     | current chi2=3.716080379802229 (change=16.928170068787445 %)
[2024-05-18 19:30:50] 2024-05-18 17:30:28,577 | INFO     | right removable region: 128
[2024-05-18 19:30:50] 2024-05-18 17:30:28,577 | INFO     | model: linear, x: [1716045594.0, 1716045655.0, 1716045716.0, 1716045777.0, 1716045838.0, 1716045899.0, 1716045960.0, 1716046021.0, 1716046082.0, 1716046143.0, 1716
[2024-05-18 19:30:50] 2024-05-18 17:30:28,577 | INFO     | sum of square deviations: 665612480.0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,577 | INFO     | sum of deviations: 4130185132.9999933
[2024-05-18 19:30:50] 2024-05-18 17:30:28,577 | INFO     | mean x: 1716049498.0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,578 | INFO     | mean y: 2332651.3410852714
[2024-05-18 19:30:50] 2024-05-18 17:30:28,578 | INFO     | -- intersect: -10645908385.443113
[2024-05-18 19:30:50] 2024-05-18 17:30:28,578 | INFO     | intersect: -10645908385.443113
[2024-05-18 19:30:50] 2024-05-18 17:30:28,578 | INFO     | chi2: 2.2465880937904665
[2024-05-18 19:30:50] 2024-05-18 17:30:28,578 | INFO     | current chi2=2.2465880937904665 (change=49.77821656732273 %)
[2024-05-18 19:30:50] 2024-05-18 17:30:28,578 | INFO     | model: linear, x: [1716045899.0, 1716045960.0, 1716046021.0, 1716046082.0, 1716046143.0, 1716046204.0, 1716046265.0, 1716046326.0, 1716046387.0, 1716046448.0, 1716
[2024-05-18 19:30:50] 2024-05-18 17:30:28,578 | INFO     | sum of square deviations: 591173875.0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,578 | INFO     | sum of deviations: -18484802001.0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,578 | INFO     | mean x: 1716049650.5
[2024-05-18 19:30:50] 2024-05-18 17:30:28,578 | INFO     | mean y: 2379039.1774193547
[2024-05-18 19:30:50] 2024-05-18 17:30:28,579 | INFO     | -- intersect: 53659753552.51794
[2024-05-18 19:30:50] 2024-05-18 17:30:28,579 | INFO     | intersect: 53659753552.51794
[2024-05-18 19:30:50] 2024-05-18 17:30:28,579 | INFO     | chi2: 0.903446982384918
[2024-05-18 19:30:50] 2024-05-18 17:30:28,579 | INFO     | current chi2=0.903446982384918 (change=59.785819889189696 %)
[2024-05-18 19:30:50] 2024-05-18 17:30:28,579 | INFO     | model: linear, x: [1716046204.0, 1716046265.0, 1716046326.0, 1716046387.0, 1716046448.0, 1716046509.0, 1716046570.0, 1716046631.0, 1716046692.0, 1716046753.0, 1716
[2024-05-18 19:30:50] 2024-05-18 17:30:28,579 | INFO     | sum of square deviations: 522502820.0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,579 | INFO     | sum of deviations: -20075186254.0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,579 | INFO     | mean x: 1716049803.0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,579 | INFO     | mean y: 2382425.529411765
[2024-05-18 19:30:50] 2024-05-18 17:30:28,580 | INFO     | -- intersect: 65935078092.82745
[2024-05-18 19:30:50] 2024-05-18 17:30:28,580 | INFO     | intersect: 65935078092.82745
[2024-05-18 19:30:50] 2024-05-18 17:30:28,580 | INFO     | chi2: 0.8533566187884862
[2024-05-18 19:30:50] 2024-05-18 17:30:28,580 | INFO     | current chi2=0.8533566187884862 (change=5.544361160430615 %)
[2024-05-18 19:30:50] 2024-05-18 17:30:28,580 | INFO     | left removable region: 30
[2024-05-18 19:30:50] 2024-05-18 17:30:28,580 | INFO     | model: linear, x: [1716047119.0, 1716047180.0, 1716047241.0, 1716047302.0, 1716047363.0, 1716047424.0, 1716047485.0, 1716047546.0, 1716047607.0, 1716047668.0, 1716
[2024-05-18 19:30:50] 2024-05-18 17:30:28,580 | INFO     | sum of square deviations: 291817564.5
[2024-05-18 19:30:50] 2024-05-18 17:30:28,580 | INFO     | sum of deviations: -4717062991.5
[2024-05-18 19:30:50] 2024-05-18 17:30:28,580 | INFO     | mean x: 1716050077.5
[2024-05-18 19:30:50] 2024-05-18 17:30:28,580 | INFO     | mean y: 2380336.5
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | -- intersect: 27741342266.38053
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | intersect: 27741342266.38053
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | chi2: 0.015473363965784094
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | -- intersect: 27741342266.38053
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | current memory leak: -16.16 B/s (using 98 data points, chi2=0.02)
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | ..............................
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | . Timing measurements:
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | . get job = 0 s
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | . initial setup = 1 s
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | . payload setup = 6 s
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | . stage-in = 0 s
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | . payload execution = 8135 s
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | . stage-out = 0 s
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | . log creation = 0 s
[2024-05-18 19:30:50] 2024-05-18 17:30:28,581 | INFO     | ..............................
[2024-05-18 19:30:50] 2024-05-18 17:30:28,645 | INFO     | 
[2024-05-18 19:30:50] 2024-05-18 17:30:28,645 | INFO     | job summary report
[2024-05-18 19:30:50] 2024-05-18 17:30:28,645 | INFO     | --------------------------------------------------
[2024-05-18 19:30:50] 2024-05-18 17:30:28,645 | INFO     | PanDA job id: 6207276963
[2024-05-18 19:30:50] 2024-05-18 17:30:28,645 | INFO     | task id: 38776125
[2024-05-18 19:30:50] 2024-05-18 17:30:28,645 | INFO     | errors: (none)
[2024-05-18 19:30:50] 2024-05-18 17:30:28,645 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | pilot state: finished 
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | transexitcode: 0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | exeerrorcode: 0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | exeerrordiag: 
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | exitcode: 0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | exitmsg: OK
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | cpuconsumptiontime: 29989 s
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | nevents: 400
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | neventsw: 0
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | pid: 1448455
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | pgrp: 1448455
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | corecount: 4
[2024-05-18 19:30:50] 2024-05-18 17:30:28,646 | INFO     | event service: False
[2024-05-18 19:30:50] 2024-05-18 17:30:28,647 | INFO     | sizes: {0: 2392140, 1: 2392282, 4: 2392488, 11: 2392516, 8145: 2420273, 8146: 2429441, 8151: 2429555}
[2024-05-18 19:30:50] 2024-05-18 17:30:28,647 | INFO     | --------------------------------------------------
[2024-05-18 19:30:50] 2024-05-18 17:30:28,647 | INFO     | 
[2024-05-18 19:30:50] 2024-05-18 17:30:28,647 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/1
[2024-05-18 19:30:50] 2024-05-18 17:30:28,670 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,670 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,671 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,671 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,671 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,672 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 19:30:50] 2024-05-18 17:30:28,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,672 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 19:30:50] 2024-05-18 17:30:28,672 | INFO     | job 6207276963 has completed (purged errors)
[2024-05-18 19:30:50] 2024-05-18 17:30:28,672 | INFO     | overall cleanup function is called
[2024-05-18 19:30:50] 2024-05-18 17:30:29,261 | WARNING  | process 1448455 is no longer using CPU - aborting
[2024-05-18 19:30:50] 2024-05-18 17:30:29,261 | INFO     | aborting job monitoring since job object (job id=6207276963) has expired
[2024-05-18 19:30:50] 2024-05-18 17:30:29,679 | INFO     | --- collectZombieJob: --- 10, [1448455]
[2024-05-18 19:30:50] 2024-05-18 17:30:29,680 | INFO     | zombie collector waiting for pid 1448455
[2024-05-18 19:30:50] 2024-05-18 17:30:29,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 19:30:50] 2024-05-18 17:30:30,684 | INFO     | collected zombie processes
[2024-05-18 19:30:50] 2024-05-18 17:30:30,685 | INFO     | will now attempt to kill all subprocesses of pid=1448455
[2024-05-18 19:30:50] 2024-05-18 17:30:30,891 | INFO     | process IDs to be killed: [1448455] (in reverse order)
[2024-05-18 19:30:50] 2024-05-18 17:30:31,034 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 19:30:50] 2024-05-18 17:30:31,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 19:30:50] 2024-05-18 17:30:31,046 | INFO     | did not find any defunct processes belonging to 1448455
[2024-05-18 19:30:50] 2024-05-18 17:30:31,055 | INFO     | did not find any defunct processes belonging to 1448455
[2024-05-18 19:30:50] 2024-05-18 17:30:31,056 | INFO     | ready for new job
[2024-05-18 19:30:50] 2024-05-18 17:30:31,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 19:30:50] 2024-05-18 17:30:31,057 | INFO     | *************************************
[2024-05-18 19:30:50] 2024-05-18 17:30:31,057 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 19:30:50] 2024-05-18 17:30:31,057 | INFO     | *************************************
[2024-05-18 19:30:50] 2024-05-18 17:30:31,057 | INFO     | 
[2024-05-18 19:30:50] 2024-05-18 17:30:31,062 | INFO     | architecture information:
[2024-05-18 19:30:50] 2024-05-18 17:30:31,062 | INFO     | executing command: cat /etc/os-release
[2024-05-18 19:30:50] 2024-05-18 17:30:31,082 | INFO     | cat /etc/os-release:
[2024-05-18 19:30:50] NAME="CentOS Linux"
[2024-05-18 19:30:50] VERSION="7 (Core)"
[2024-05-18 19:30:50] ID="centos"
[2024-05-18 19:30:50] ID_LIKE="rhel fedora"
[2024-05-18 19:30:50] VERSION_ID="7"
[2024-05-18 19:30:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 19:30:50] ANSI_COLOR="0;31"
[2024-05-18 19:30:50] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 19:30:50] HOME_URL="https://www.centos.org/"
[2024-05-18 19:30:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 19:30:50] 
[2024-05-18 19:30:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 19:30:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 19:30:50] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 19:30:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 19:30:50] 
[2024-05-18 19:30:50] 2024-05-18 17:30:31,082 | INFO     | *************************************
[2024-05-18 19:30:50] 2024-05-18 17:30:31,584 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/1
[2024-05-18 19:30:50] 2024-05-18 17:30:31,610 | INFO     | sufficient remaining disk space (2989740785664 B)
[2024-05-18 19:30:50] 2024-05-18 17:30:31,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 19:30:50] 2024-05-18 17:30:31,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 19:30:50] 2024-05-18 17:30:31,611 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 19:30:50] 2024-05-18 17:30:31,612 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 19:30:50] 2024-05-18 17:30:31,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 19:30:50] 2024-05-18 17:30:31,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 19:30:50] 2024-05-18 17:30:31,662 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 19:30:50] 2024-05-18 17:30:31,700 | INFO     | all payload control threads have been joined
[2024-05-18 19:30:50] 2024-05-18 17:30:31,763 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 19:30:50] 2024-05-18 17:30:31,764 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 19:30:50] 2024-05-18 17:30:31,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 19:30:50] 2024-05-18 17:30:31,764 | INFO     | will abort loop
[2024-05-18 19:30:50] 2024-05-18 17:30:31,982 | INFO     | all data control threads have been joined
[2024-05-18 19:30:50] 2024-05-18 17:30:32,071 | INFO     | all job control threads have been joined
[2024-05-18 19:30:50] 2024-05-18 17:30:32,616 | INFO     | [job] retrieve thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:32,705 | INFO     | [payload] control thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:32,758 | INFO     | [payload] failed_post thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:32,769 | INFO     | [job] job monitor thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:32,789 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:32,956 | INFO     | [data] copytool_in thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:32,987 | INFO     | [data] control thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:33,077 | INFO     | [job] control thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:33,126 | INFO     | [job] validate thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:33,338 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:33,483 | INFO     | [payload] validate_post thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:33,594 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:33,655 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 19:30:50] 2024-05-18 17:30:33,668 | INFO     | [data] copytool_out thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:34,660 | INFO     | [job] queue monitor thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:34,910 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 19:30:50] 2024-05-18 17:30:38,915 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:42,127 | INFO     | job.realtimelogging is not enabled
[2024-05-18 19:30:50] 2024-05-18 17:30:43,133 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 19:30:50] 2024-05-18 17:30:44,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47287218156608)>', '<ExcThread(monitor, started 47287866767104)>']
[2024-05-18 19:30:50] 2024-05-18 17:30:45,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 19:30:50] 2024-05-18 17:30:45,681 | INFO     | [monitor] control thread has ended
[2024-05-18 19:30:50] 2024-05-18 17:30:49,757 | INFO     | all workflow threads have been joined
[2024-05-18 19:30:50] 2024-05-18 17:30:49,757 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 19:30:50] 2024-05-18 17:30:49,758 | INFO     | traces error code: 0
[2024-05-18 19:30:50] 2024-05-18 17:30:49,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 19:30:50] 2024-05-18 17:30:49,825 [wrapper] ==== pilot stdout END ====
[2024-05-18 19:30:50] 2024-05-18 17:30:49,827 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 19:30:50] 2024-05-18 17:30:49,829 [wrapper] pilotpid: 1440479
[2024-05-18 19:30:50] 2024-05-18 17:30:49,830 [wrapper] Pilot exit status: 0
[2024-05-18 19:30:50] 2024-05-18 17:30:49,839 [wrapper] pandaids: 6207276963
[2024-05-18 19:30:50] 2024-05-18 17:30:49,926 [wrapper] cleanup: SIGTERM to supervisor_pilot 2055172 1440480
[2024-05-18 19:30:50] 2024-05-18 17:30:49,929 [wrapper] Test setup, not cleaning
[2024-05-18 19:30:50] 2024-05-18 17:30:49,931 [wrapper] ==== wrapper stdout END ====
[2024-05-18 19:30:50] 2024-05-18 17:30:49,932 [wrapper] ==== wrapper stderr END ====
[2024-05-18 19:30:50] 2024-05-18 17:30:49,938 [wrapper] apfmon messages muted
[2024-05-18 19:30:50]  *** Error codes and diagnostics ***
[2024-05-18 19:30:50]     "exeErrorCode": 0,
[2024-05-18 19:30:50]     "exeErrorDiag": "",
[2024-05-18 19:30:50]     "pilotErrorCode": 0,
[2024-05-18 19:30:50]     "pilotErrorDiag": "",
[2024-05-18 19:30:50]  *** Listing of results directory ***
[2024-05-18 19:30:50] total 832280
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc    467845 May 16 09:45 pilot3.tar.gz
[2024-05-18 19:30:50] -rwx------ 1 boinc boinc     32251 May 16 10:09 runpilot2-wrapper.sh
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc      5633 May 16 10:09 queuedata.json
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc       100 May 18 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 19:30:50] -rwxr-xr-x 1 boinc boinc      7986 May 18 16:36 run_atlas
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc       105 May 18 16:36 job.xml
[2024-05-18 19:30:50] -rw-r--r-- 2 boinc boinc 600322537 May 18 17:14 EVNT.38776119._000337.pool.root.1
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc      6646 May 18 17:14 init_data.xml
[2024-05-18 19:30:50] drwxrwx--x 2 boinc boinc      4096 May 18 17:14 shared
[2024-05-18 19:30:50] -rw-r--r-- 2 boinc boinc    480010 May 18 17:14 input.tar.gz
[2024-05-18 19:30:50] -rw-r--r-- 2 boinc boinc     17537 May 18 17:14 start_atlas.sh
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc         0 May 18 17:14 boinc_lockfile
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc      2632 May 18 17:14 pandaJob.out
[2024-05-18 19:30:50] -rw------- 1 boinc boinc       424 May 18 17:14 setup.sh.local
[2024-05-18 19:30:50] -rw------- 1 boinc boinc   1019426 May 18 17:14 agis_schedconf.cvmfs.json
[2024-05-18 19:30:50] -rw------- 1 boinc boinc         0 May 18 17:14 agis_ddmendpoints.agis.ALL.json
[2024-05-18 19:30:50] -rw------- 1 boinc boinc   1324701 May 18 17:14 cric_ddmendpoints.json
[2024-05-18 19:30:50] drwx------ 4 boinc boinc      4096 May 18 17:14 pilot3
[2024-05-18 19:30:50] -rw------- 1 boinc boinc        95 May 18 19:29 pilot_heartbeat.json
[2024-05-18 19:30:50] -rw------- 1 boinc boinc 246179239 May 18 19:29 HITS.38776125._013474.pool.root.1
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc       531 May 18 19:30 boinc_task_state.xml
[2024-05-18 19:30:50] -rw------- 1 boinc boinc      1043 May 18 19:30 memory_monitor_summary.json
[2024-05-18 19:30:50] -rw------- 1 boinc boinc    267287 May 18 19:30 log.38776125._013474.job.log.tgz.1
[2024-05-18 19:30:50] -rw------- 1 boinc boinc      7720 May 18 19:30 heartbeat.json
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc      8192 May 18 19:30 boinc_mmap_file
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc        27 May 18 19:30 wrapper_checkpoint.txt
[2024-05-18 19:30:50] -rw------- 1 boinc boinc      4604 May 18 19:30 pilotlog.txt
[2024-05-18 19:30:50] -rw------- 1 boinc boinc    841922 May 18 19:30 log.38776125._013474.job.log.1
[2024-05-18 19:30:50] -rw------- 1 boinc boinc       357 May 18 19:30 output.list
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc       620 May 18 19:30 runtime_log
[2024-05-18 19:30:50] -rw------- 1 boinc boinc   1126400 May 18 19:30 result.tar.gz
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc     11428 May 18 19:30 runtime_log.err
[2024-05-18 19:30:50] -rw------- 1 boinc boinc       657 May 18 19:30 pWMMDmuLlR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmgFKKDmlUBu7m.diag
[2024-05-18 19:30:50] -rw-r--r-- 1 boinc boinc     21270 May 18 19:30 stderr.txt
[2024-05-18 19:30:50] HITS file was successfully produced:
[2024-05-18 19:30:50] -rw------- 1 boinc boinc 246179239 May 18 19:29 shared/HITS.pool.root.1
[2024-05-18 19:30:50]  *** Contents of shared directory: ***
[2024-05-18 19:30:50] total 828268
[2024-05-18 19:30:50] -rw-r--r-- 2 boinc boinc 600322537 May 18 17:14 ATLAS.root_0
[2024-05-18 19:30:50] -rw-r--r-- 2 boinc boinc    480010 May 18 17:14 input.tar.gz
[2024-05-18 19:30:50] -rw-r--r-- 2 boinc boinc     17537 May 18 17:14 start_atlas.sh
[2024-05-18 19:30:50] -rw------- 1 boinc boinc 246179239 May 18 19:29 HITS.pool.root.1
[2024-05-18 19:30:50] -rw------- 1 boinc boinc   1126400 May 18 19:30 result.tar.gz
19:30:51 (1435499): run_atlas exited; CPU time 29785.352334
19:30:51 (1435499): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN