Name yvINDmhvkR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmeEKKDmez410n_0
Workunit 223045184
Created 16 May 2024, 7:42:18 UTC
Sent 16 May 2024, 15:01:20 UTC
Report deadline 24 May 2024, 15:01:20 UTC
Received 17 May 2024, 1:16:04 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10821009
Run time 2 hours 23 min 44 sec
CPU time 5 hours 58 min 6 sec
Validate state Valid
Credit 1,298.37
Device peak FLOPS 47.94 GFLOPS
Application version ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas)
x86_64-pc-linux-gnu
Peak working set size 3.76 GB
Peak swap size 5.31 GB
Peak disk usage 2.38 GB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-16 23:51:53 (195710): Detected: vboxwrapper 26206
2024-05-16 23:51:53 (195710): Detected: BOINC client v7.24.1
2024-05-16 23:51:53 (195710): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-05-16 23:51:53 (195710): Successfully copied 'init_data.xml' to the shared directory.
2024-05-16 23:51:53 (195710): Create VM. (boinc_52554fe1c2acc1fe, slot#0)
2024-05-16 23:51:53 (195710): Setting Memory Size for VM. (4600MB)
2024-05-16 23:51:53 (195710): Setting CPU Count for VM. (6)
2024-05-16 23:51:53 (195710): Setting Chipset Options for VM.
2024-05-16 23:51:53 (195710): Setting Graphics Controller Options for VM.
2024-05-16 23:51:53 (195710): Setting Boot Options for VM.
2024-05-16 23:51:53 (195710): Setting Network Configuration for NAT.
2024-05-16 23:51:54 (195710): Enabling VM Network Access.
2024-05-16 23:51:54 (195710): Disabling USB Support for VM.
2024-05-16 23:51:54 (195710): Disabling COM Port Support for VM.
2024-05-16 23:51:54 (195710): Disabling LPT Port Support for VM.
2024-05-16 23:51:54 (195710): Disabling Audio Support for VM.
2024-05-16 23:51:54 (195710): Disabling Clipboard Support for VM.
2024-05-16 23:51:54 (195710): Disabling Drag and Drop Support for VM.
2024-05-16 23:51:54 (195710): Adding storage controller(s) to VM.
2024-05-16 23:51:54 (195710): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-16 23:51:55 (195710): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-16 23:51:55 (195710): forwarding host port 36571 to guest port 80
2024-05-16 23:51:55 (195710): Enabling remote desktop for VM.
2024-05-16 23:51:55 (195710): Required extension pack not installed, remote desktop not enabled.
2024-05-16 23:51:55 (195710): Enabling shared directory for VM.
2024-05-16 23:51:55 (195710): Starting VM using VBoxManage interface. (boinc_52554fe1c2acc1fe, slot#0)
2024-05-16 23:51:56 (195710): Successfully started VM. (PID = '195964')
2024-05-16 23:51:56 (195710): Reporting VM Process ID to BOINC.
2024-05-16 23:51:56 (195710): Guest Log: BIOS: VirtualBox 7.0.18
2024-05-16 23:51:56 (195710): Guest Log: CPUID EDX: 0x178bfbff
2024-05-16 23:51:56 (195710): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-16 23:51:56 (195710): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-16 23:51:56 (195710): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-16 23:51:56 (195710): Detected: Web Application Enabled (http://localhost:36571)
2024-05-16 23:51:56 (195710): Preference change detected
2024-05-16 23:51:56 (195710): Setting CPU throttle for VM. (50%)
2024-05-16 23:51:56 (195710): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-16 23:51:58 (195710): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-16 23:51:58 (195710): Guest Log: BIOS: Booting from Hard Disk...
2024-05-16 23:52:01 (195710): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-16 23:52:01 (195710): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-16 23:52:01 (195710): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-16 23:52:09 (195710): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-16 23:52:09 (195710): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-16 23:52:14 (195710): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-16 23:52:14 (195710): Guest Log: 00:00:00.000081 main     Log opened 2024-05-16T21:52:12.172533000Z
2024-05-16 23:52:14 (195710): Guest Log: 00:00:00.000142 main     OS Product: Linux
2024-05-16 23:52:14 (195710): Guest Log: 00:00:00.000154 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-16 23:52:14 (195710): Guest Log: 00:00:00.000172 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-16 23:52:14 (195710): Guest Log: 00:00:00.000181 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-16 23:52:14 (195710): Guest Log: 00:00:00.000181 main     Process ID: 1327
2024-05-16 23:52:14 (195710): Guest Log: 00:00:00.000181 main     Package type: LINUX_64BITS_GENERIC
2024-05-16 23:52:14 (195710): Guest Log: 00:00:00.000747 main     5.2.32 r132073 started. Verbose level = 0
2024-05-16 23:52:14 (195710): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-16 23:52:14 (195710): Guest Log: [INFO] Mounting shared directory
2024-05-16 23:52:14 (195710): Guest Log: [INFO] Checking for init_data.xml
2024-05-16 23:52:16 (195710): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-16 23:52:16 (195710): Guest Log: [INFO] Detected branch: prod
2024-05-16 23:52:16 (195710): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-16 23:52:16 (195710): Guest Log: Copying input files
2024-05-16 23:52:18 (195710): Guest Log: Copied input files into RunAtlas.
2024-05-16 23:52:18 (195710): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-16 23:52:18 (195710): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-16 23:52:18 (195710): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-16 23:52:18 (195710): Guest Log: Further information can be found at the LHC@home message board.
2024-05-16 23:52:25 (195710): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-16 23:52:26 (195710): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-16 23:52:26 (195710): Guest Log: 2.6.3.0 1605 0 32212 132815 4 1 3116989 4096000 0 65024 0 0 n/a 1 2 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-05-16 23:52:26 (195710): Guest Log: copied the webapp to /var/www
2024-05-16 23:52:26 (195710): Guest Log: ATHENA_PROC_NUMBER=6
2024-05-16 23:52:26 (195710): Guest Log: ATHENA_CORE_NUMBER=6
2024-05-16 23:52:26 (195710): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-16 23:52:26 (195710): Guest Log:  *** Starting ATLAS job. (PandaID=6207276800 taskID=38776125) ***
2024-05-17 01:30:57 (195710): Status Report: Elapsed Time: '6000.000000'
2024-05-17 01:30:57 (195710): Status Report: CPU Time: '14163.380000'
2024-05-17 02:15:33 (195710): Guest Log:  *** Job finished ***
2024-05-17 02:15:33 (195710): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:19,641 | INFO     | [data] queue_monitor thread has finished
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:23,073 | INFO     | job.realtimelogging is not enabled
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:24,075 | INFO     | [payload] run_realtimelog thread has finished
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:26,100 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140250437748544)>', '<ExcThread(monitor, started 140249741129472)>']
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:26,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:26,192 | INFO     | [monitor] control thread has ended
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,106 | INFO     | all workflow threads have been joined
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,106 | INFO     | end of generic workflow (traces error code: 0)
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,106 | INFO     | traces error code: 0
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,140 [wrapper] ==== pilot stdout END ====
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,143 [wrapper] ==== wrapper stdout RESUME ====
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,145 [wrapper] pilotpid: 6505
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,148 [wrapper] Pilot exit status: 0
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,258 [wrapper] pandaids: 6207276800
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,274 [wrapper] cleanup: SIGTERM to supervisor_pilot  6464 6506
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,277 [wrapper] Test setup, not cleaning
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,280 [wrapper] ==== wrapper stdout END ====
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,282 [wrapper] ==== wrapper stderr END ====
2024-05-17 02:15:33 (195710): Guest Log: 2024-05-17 00:15:31,287 [wrapper] apfmon messages muted
2024-05-17 02:15:33 (195710): Guest Log:  *** Error codes and diagnostics ***
2024-05-17 02:15:33 (195710): Guest Log:     "exeErrorCode": 0,
2024-05-17 02:15:33 (195710): Guest Log:     "exeErrorDiag": "",
2024-05-17 02:15:33 (195710): Guest Log:     "pilotErrorCode": 0,
2024-05-17 02:15:33 (195710): Guest Log:     "pilotErrorDiag": "",
2024-05-17 02:15:33 (195710): Guest Log:  *** Listing of results directory ***
2024-05-17 02:15:33 (195710): Guest Log: total 244464
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 atlas atlas    467845 May 16 07:27 pilot3.tar.gz
2024-05-17 02:15:33 (195710): Guest Log: -rwx------. 1 atlas atlas     32251 May 16 07:42 runpilot2-wrapper.sh
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 16 07:42 queuedata.json
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 atlas atlas    480016 May 16 21:52 input.tar.gz
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 atlas atlas     17537 May 16 21:52 start_atlas.sh
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 atlas atlas      6865 May 16 21:52 init_data.xml
2024-05-17 02:15:33 (195710): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 16 21:52 EVNT.38776119._000297.pool.root.1 -> /data/./ATLAS.root_0
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 atlas atlas      2633 May 16 21:52 pandaJob.out
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas       424 May 16 21:52 setup.sh.local
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas   1019286 May 16 21:53 agis_schedconf.cvmfs.json
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas         0 May 16 21:53 agis_ddmendpoints.agis.ALL.json
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas   1324701 May 16 21:53 cric_ddmendpoints.json
2024-05-17 02:15:33 (195710): Guest Log: drwx------. 4 atlas atlas      4096 May 16 21:53 pilot3
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas        95 May 17 00:14 pilot_heartbeat.json
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas 245326582 May 17 00:14 HITS.38776125._013317.pool.root.1
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas      1029 May 17 00:14 memory_monitor_summary.json
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas    276451 May 17 00:15 log.38776125._013317.job.log.tgz.1
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas      7739 May 17 00:15 heartbeat.json
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas      4343 May 17 00:15 pilotlog.txt
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas    495895 May 17 00:15 log.38776125._013317.job.log.1
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas       357 May 17 00:15 output.list
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 17 00:15 runtime_log
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas    788480 May 17 00:15 result.tar.gz
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas       660 May 17 00:15 yvINDmhvkR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmeEKKDmez410n.diag
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 atlas atlas     10984 May 17 00:15 runtime_log.err
2024-05-17 02:15:33 (195710): Guest Log: Looking for outputfile HITS.38776125._013317.pool.root.1
2024-05-17 02:15:33 (195710): Guest Log: HITS file was successfully produced
2024-05-17 02:15:33 (195710): Guest Log: -rw-------. 1 atlas atlas 245326582 May 17 00:14 /home/atlas/RunAtlas/HITS.38776125._013317.pool.root.1
2024-05-17 02:15:33 (195710): Guest Log: Successfully finished the ATLAS job!
2024-05-17 02:15:33 (195710): Guest Log: Copying the results back to the shared directory!
2024-05-17 02:15:33 (195710): Guest Log:  *** Contents of shared directory: ***
2024-05-17 02:15:33 (195710): Guest Log: total 585528
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 root root 598273926 May 16 21:51 ATLAS.root_0
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 root root      6865 May 16 21:51 init_data.xml
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 root root    480016 May 16 21:51 input.tar.gz
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 root root    788480 May 17  2024 result.tar.gz
2024-05-17 02:15:33 (195710): Guest Log: -rw-r--r--. 1 root root     17537 May 16 21:51 start_atlas.sh
2024-05-17 02:15:33 (195710): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-17 02:15:33 (195710): VM Completion File Detected.
2024-05-17 02:15:33 (195710): Powering off VM.
2024-05-17 02:15:33 (195710): Successfully stopped VM.
2024-05-17 02:15:33 (195710): Deregistering VM. (boinc_52554fe1c2acc1fe, slot#0)
2024-05-17 02:15:33 (195710): Removing network bandwidth throttle group from VM.
2024-05-17 02:15:33 (195710): Removing VM from VirtualBox.
02:15:38 (195710): called boinc_finish(0)

</stderr_txt>
]]>


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