Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:01:42 (3632716): wrapper (7.7.26015): starting
11:01:42 (3632716): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 11:01:42] Arguments: --nthreads 4
[2024-05-19 11:01:42] Threads: 4
[2024-05-19 11:01:42] Checking for CVMFS
[2024-05-19 11:01:42] No cvmfs_config command found, will try listing directly
[2024-05-19 11:01:42] CVMFS is ok
[2024-05-19 11:01:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 11:01:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 11:01:42] Further information can be found at the LHC@home message board.
[2024-05-19 11:01:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 11:01:42] Checking for apptainer binary...
[2024-05-19 11:01:42] which: no apptainer in ((null))
[2024-05-19 11:01:42] apptainer is not installed, using version from CVMFS
[2024-05-19 11:01:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 11:01:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-05-19 11:01:43] apptainer works
[2024-05-19 11:01:43] Set ATHENA_PROC_NUMBER=4
[2024-05-19 11:01:43] Set ATHENA_CORE_NUMBER=4
[2024-05-19 11:01:43] Starting ATLAS job with PandaID=6207219887
[2024-05-19 11:01:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 15:05:03]  *** The last 200 lines of the pilot log: ***
[2024-05-19 15:05:03] 2024-05-19 13:04:42,855 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 15:05:03] 2024-05-19 13:04:42,855 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 15:05:03] 2024-05-19 13:04:42,858 | INFO     | fitting pss+swap vs Time
[2024-05-19 15:05:03] 2024-05-19 13:04:42,859 | INFO     | model: linear, x: [1716109332.0, 1716109393.0, 1716109454.0, 1716109515.0, 1716109576.0, 1716109637.0, 1716109698.0, 1716109759.0, 1716109820.0, 1716109881.0, 1716
[2024-05-19 15:05:03] 2024-05-19 13:04:42,859 | INFO     | sum of square deviations: 4233158440.0
[2024-05-19 15:05:03] 2024-05-19 13:04:42,860 | INFO     | sum of deviations: 94417413572.0
[2024-05-19 15:05:03] 2024-05-19 13:04:42,860 | INFO     | mean x: 1716116591.0
[2024-05-19 15:05:03] 2024-05-19 13:04:42,860 | INFO     | mean y: 2279788.1631799163
[2024-05-19 15:05:03] 2024-05-19 13:04:42,860 | INFO     | -- intersect: -38274409404.27295
[2024-05-19 15:05:03] 2024-05-19 13:04:42,860 | INFO     | intersect: -38274409404.27295
[2024-05-19 15:05:03] 2024-05-19 13:04:42,860 | INFO     | chi2: 4.575670529559183
[2024-05-19 15:05:03] 2024-05-19 13:04:42,861 | INFO     | model: linear, x: [1716109332.0, 1716109393.0, 1716109454.0, 1716109515.0, 1716109576.0, 1716109637.0, 1716109698.0, 1716109759.0, 1716109820.0, 1716109881.0, 1716
[2024-05-19 15:05:03] 2024-05-19 13:04:42,861 | INFO     | sum of square deviations: 3972995422.5
[2024-05-19 15:05:03] 2024-05-19 13:04:42,862 | INFO     | sum of deviations: 106670554149.0
[2024-05-19 15:05:03] 2024-05-19 13:04:42,862 | INFO     | mean x: 1716116438.5
[2024-05-19 15:05:03] 2024-05-19 13:04:42,862 | INFO     | mean y: 2286823.205128205
[2024-05-19 15:05:03] 2024-05-19 13:04:42,862 | INFO     | -- intersect: -46073550677.713425
[2024-05-19 15:05:03] 2024-05-19 13:04:42,862 | INFO     | intersect: -46073550677.713425
[2024-05-19 15:05:03] 2024-05-19 13:04:42,862 | INFO     | chi2: 3.8267273616930013
[2024-05-19 15:05:03] 2024-05-19 13:04:42,862 | INFO     | current chi2=3.8267273616930013 (change=16.367943518396945 %)
[2024-05-19 15:05:03] 2024-05-19 13:04:42,862 | INFO     | right removable region: 233
[2024-05-19 15:05:03] 2024-05-19 13:04:42,863 | INFO     | model: linear, x: [1716109637.0, 1716109698.0, 1716109759.0, 1716109820.0, 1716109881.0, 1716109942.0, 1716110003.0, 1716110064.0, 1716110125.0, 1716110186.0, 1716
[2024-05-19 15:05:03] 2024-05-19 13:04:42,863 | INFO     | sum of square deviations: 3972995422.5
[2024-05-19 15:05:03] 2024-05-19 13:04:42,864 | INFO     | sum of deviations: 40345610602.5
[2024-05-19 15:05:03] 2024-05-19 13:04:42,864 | INFO     | mean x: 1716116743.5
[2024-05-19 15:05:03] 2024-05-19 13:04:42,864 | INFO     | mean y: 2311403.5
[2024-05-19 15:05:03] 2024-05-19 13:04:42,864 | INFO     | -- intersect: -17424785916.968
[2024-05-19 15:05:03] 2024-05-19 13:04:42,864 | INFO     | intersect: -17424785916.968
[2024-05-19 15:05:03] 2024-05-19 13:04:42,864 | INFO     | chi2: 2.2060070617872913
[2024-05-19 15:05:03] 2024-05-19 13:04:42,864 | INFO     | current chi2=2.2060070617872913 (change=51.78833249605022 %)
[2024-05-19 15:05:03] 2024-05-19 13:04:42,865 | INFO     | model: linear, x: [1716109942.0, 1716110003.0, 1716110064.0, 1716110125.0, 1716110186.0, 1716110247.0, 1716110308.0, 1716110369.0, 1716110430.0, 1716110491.0, 1716
[2024-05-19 15:05:03] 2024-05-19 13:04:42,865 | INFO     | sum of square deviations: 3723716330.0
[2024-05-19 15:05:03] 2024-05-19 13:04:42,866 | INFO     | sum of deviations: -2623617503.000002
[2024-05-19 15:05:03] 2024-05-19 13:04:42,866 | INFO     | mean x: 1716116896.0
[2024-05-19 15:05:03] 2024-05-19 13:04:42,866 | INFO     | mean y: 2337692.209606987
[2024-05-19 15:05:03] 2024-05-19 13:04:42,866 | INFO     | -- intersect: 1211461569.1456444
[2024-05-19 15:05:03] 2024-05-19 13:04:42,866 | INFO     | intersect: 1211461569.1456444
[2024-05-19 15:05:03] 2024-05-19 13:04:42,866 | INFO     | chi2: 0.8450530666103898
[2024-05-19 15:05:03] 2024-05-19 13:04:42,866 | INFO     | current chi2=0.8450530666103898 (change=61.69309331558832 %)
[2024-05-19 15:05:03] 2024-05-19 13:04:42,866 | INFO     | model: linear, x: [1716110247.0, 1716110308.0, 1716110369.0, 1716110430.0, 1716110491.0, 1716110552.0, 1716110613.0, 1716110674.0, 1716110735.0, 1716110796.0, 1716
[2024-05-19 15:05:03] 2024-05-19 13:04:42,867 | INFO     | sum of square deviations: 3485088600.0
[2024-05-19 15:05:03] 2024-05-19 13:04:42,867 | INFO     | sum of deviations: -10074041603.0
[2024-05-19 15:05:03] 2024-05-19 13:04:42,868 | INFO     | mean x: 1716117048.5
[2024-05-19 15:05:03] 2024-05-19 13:04:42,868 | INFO     | mean y: 2342411.3928571427
[2024-05-19 15:05:03] 2024-05-19 13:04:42,868 | INFO     | -- intersect: 4962972262.297241
[2024-05-19 15:05:03] 2024-05-19 13:04:42,868 | INFO     | intersect: 4962972262.297241
[2024-05-19 15:05:03] 2024-05-19 13:04:42,868 | INFO     | chi2: 0.7817959964020109
[2024-05-19 15:05:03] 2024-05-19 13:04:42,868 | INFO     | current chi2=0.7817959964020109 (change=7.485573712206106 %)
[2024-05-19 15:05:03] 2024-05-19 13:04:42,868 | INFO     | left removable region: 30
[2024-05-19 15:05:03] 2024-05-19 13:04:42,868 | INFO     | model: linear, x: [1716111162.0, 1716111223.0, 1716111284.0, 1716111345.0, 1716111406.0, 1716111467.0, 1716111528.0, 1716111589.0, 1716111650.0, 1716111711.0, 1716
[2024-05-19 15:05:03] 2024-05-19 13:04:42,868 | INFO     | sum of square deviations: 2593916542.0
[2024-05-19 15:05:03] 2024-05-19 13:04:42,869 | INFO     | sum of deviations: 1759836640.9999998
[2024-05-19 15:05:03] 2024-05-19 13:04:42,869 | INFO     | mean x: 1716117323.0
[2024-05-19 15:05:03] 2024-05-19 13:04:42,869 | INFO     | mean y: 2352525.5862068967
[2024-05-19 15:05:03] 2024-05-19 13:04:42,869 | INFO     | -- intersect: -1161943278.218506
[2024-05-19 15:05:03] 2024-05-19 13:04:42,870 | INFO     | intersect: -1161943278.218506
[2024-05-19 15:05:03] 2024-05-19 13:04:42,870 | INFO     | chi2: 0.0016177936677949027
[2024-05-19 15:05:03] 2024-05-19 13:04:42,870 | INFO     | -- intersect: -1161943278.218506
[2024-05-19 15:05:03] 2024-05-19 13:04:42,870 | INFO     | current memory leak: 0.68 B/s (using 203 data points, chi2=0.00)
[2024-05-19 15:05:03] 2024-05-19 13:04:42,870 | INFO     | ..............................
[2024-05-19 15:05:03] 2024-05-19 13:04:42,870 | INFO     | . Timing measurements:
[2024-05-19 15:05:03] 2024-05-19 13:04:42,870 | INFO     | . get job = 0 s
[2024-05-19 15:05:03] 2024-05-19 13:04:42,871 | INFO     | . initial setup = 1 s
[2024-05-19 15:05:03] 2024-05-19 13:04:42,871 | INFO     | . payload setup = 3 s
[2024-05-19 15:05:03] 2024-05-19 13:04:42,871 | INFO     | . stage-in = 0 s
[2024-05-19 15:05:03] 2024-05-19 13:04:42,871 | INFO     | . payload execution = 14543 s
[2024-05-19 15:05:03] 2024-05-19 13:04:42,871 | INFO     | . stage-out = 0 s
[2024-05-19 15:05:03] 2024-05-19 13:04:42,871 | INFO     | . log creation = 0 s
[2024-05-19 15:05:03] 2024-05-19 13:04:42,871 | INFO     | ..............................
[2024-05-19 15:05:03] 2024-05-19 13:04:43,109 | INFO     | 
[2024-05-19 15:05:03] 2024-05-19 13:04:43,109 | INFO     | job summary report
[2024-05-19 15:05:03] 2024-05-19 13:04:43,109 | INFO     | --------------------------------------------------
[2024-05-19 15:05:03] 2024-05-19 13:04:43,109 | INFO     | PanDA job id: 6207219887
[2024-05-19 15:05:03] 2024-05-19 13:04:43,109 | INFO     | task id: 38776125
[2024-05-19 15:05:03] 2024-05-19 13:04:43,109 | INFO     | errors: (none)
[2024-05-19 15:05:03] 2024-05-19 13:04:43,109 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 15:05:03] 2024-05-19 13:04:43,109 | INFO     | pilot state: finished 
[2024-05-19 15:05:03] 2024-05-19 13:04:43,109 | INFO     | transexitcode: 0
[2024-05-19 15:05:03] 2024-05-19 13:04:43,109 | INFO     | exeerrorcode: 0
[2024-05-19 15:05:03] 2024-05-19 13:04:43,109 | INFO     | exeerrordiag: 
[2024-05-19 15:05:03] 2024-05-19 13:04:43,112 | INFO     | exitcode: 0
[2024-05-19 15:05:03] 2024-05-19 13:04:43,112 | INFO     | exitmsg: OK
[2024-05-19 15:05:03] 2024-05-19 13:04:43,112 | INFO     | cpuconsumptiontime: 55380 s
[2024-05-19 15:05:03] 2024-05-19 13:04:43,112 | INFO     | nevents: 400
[2024-05-19 15:05:03] 2024-05-19 13:04:43,112 | INFO     | neventsw: 0
[2024-05-19 15:05:03] 2024-05-19 13:04:43,112 | INFO     | pid: 3644508
[2024-05-19 15:05:03] 2024-05-19 13:04:43,113 | INFO     | pgrp: 3644508
[2024-05-19 15:05:03] 2024-05-19 13:04:43,113 | INFO     | corecount: 4
[2024-05-19 15:05:03] 2024-05-19 13:04:43,113 | INFO     | event service: False
[2024-05-19 15:05:03] 2024-05-19 13:04:43,113 | INFO     | sizes: {0: 2392256, 3: 2392462, 11: 2392490, 14550: 2423333, 14551: 2423332, 14552: 2432370, 14554: 2432554, 14558: 2432724}
[2024-05-19 15:05:03] 2024-05-19 13:04:43,113 | INFO     | --------------------------------------------------
[2024-05-19 15:05:03] 2024-05-19 13:04:43,113 | INFO     | 
[2024-05-19 15:05:03] 2024-05-19 13:04:43,113 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2024-05-19 15:05:03] 2024-05-19 13:04:43,132 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,132 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,132 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,132 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,133 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,133 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,135 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 15:05:03] 2024-05-19 13:04:43,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,135 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 15:05:03] 2024-05-19 13:04:43,135 | INFO     | job 6207219887 has completed (purged errors)
[2024-05-19 15:05:03] 2024-05-19 13:04:43,136 | INFO     | overall cleanup function is called
[2024-05-19 15:05:03] 2024-05-19 13:04:44,144 | INFO     | --- collectZombieJob: --- 10, [3644508]
[2024-05-19 15:05:03] 2024-05-19 13:04:44,144 | INFO     | zombie collector waiting for pid 3644508
[2024-05-19 15:05:03] 2024-05-19 13:04:44,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 15:05:03] 2024-05-19 13:04:45,150 | INFO     | collected zombie processes
[2024-05-19 15:05:03] 2024-05-19 13:04:45,150 | INFO     | will now attempt to kill all subprocesses of pid=3644508
[2024-05-19 15:05:03] 2024-05-19 13:04:45,265 | INFO     | process IDs to be killed: [3644508] (in reverse order)
[2024-05-19 15:05:03] 2024-05-19 13:04:45,329 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 15:05:03] 2024-05-19 13:04:45,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 15:05:03] 2024-05-19 13:04:45,334 | INFO     | did not find any defunct processes belonging to 3644508
[2024-05-19 15:05:03] 2024-05-19 13:04:45,338 | INFO     | did not find any defunct processes belonging to 3644508
[2024-05-19 15:05:03] 2024-05-19 13:04:45,338 | INFO     | ready for new job
[2024-05-19 15:05:03] 2024-05-19 13:04:45,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 15:05:03] 2024-05-19 13:04:45,341 | INFO     | *************************************
[2024-05-19 15:05:03] 2024-05-19 13:04:45,341 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 15:05:03] 2024-05-19 13:04:45,341 | INFO     | *************************************
[2024-05-19 15:05:03] 2024-05-19 13:04:45,341 | INFO     | 
[2024-05-19 15:05:03] 2024-05-19 13:04:45,343 | INFO     | architecture information:
[2024-05-19 15:05:03] 2024-05-19 13:04:45,343 | INFO     | executing command: cat /etc/os-release
[2024-05-19 15:05:03] 2024-05-19 13:04:45,353 | INFO     | cat /etc/os-release:
[2024-05-19 15:05:03] NAME="CentOS Linux"
[2024-05-19 15:05:03] VERSION="7 (Core)"
[2024-05-19 15:05:03] ID="centos"
[2024-05-19 15:05:03] ID_LIKE="rhel fedora"
[2024-05-19 15:05:03] VERSION_ID="7"
[2024-05-19 15:05:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 15:05:03] ANSI_COLOR="0;31"
[2024-05-19 15:05:03] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 15:05:03] HOME_URL="https://www.centos.org/"
[2024-05-19 15:05:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 15:05:03] 
[2024-05-19 15:05:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 15:05:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 15:05:03] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 15:05:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 15:05:03] 
[2024-05-19 15:05:03] 2024-05-19 13:04:45,354 | INFO     | *************************************
[2024-05-19 15:05:03] 2024-05-19 13:04:45,856 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2024-05-19 15:05:03] 2024-05-19 13:04:45,872 | INFO     | sufficient remaining disk space (1616755294208 B)
[2024-05-19 15:05:03] 2024-05-19 13:04:45,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 15:05:03] 2024-05-19 13:04:45,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 15:05:03] 2024-05-19 13:04:45,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 15:05:03] 2024-05-19 13:04:45,873 | INFO     | aborting loop
[2024-05-19 15:05:03] 2024-05-19 13:04:46,060 | INFO     | all data control threads have been joined
[2024-05-19 15:05:03] 2024-05-19 13:04:46,335 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 15:05:03] 2024-05-19 13:04:46,335 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 15:05:03] 2024-05-19 13:04:46,336 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 15:05:03] 2024-05-19 13:04:46,490 | INFO     | all job control threads have been joined
[2024-05-19 15:05:03] 2024-05-19 13:04:46,773 | INFO     | all payload control threads have been joined
[2024-05-19 15:05:03] 2024-05-19 13:04:46,875 | INFO     | [job] job monitor thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:46,878 | INFO     | [job] retrieve thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:47,065 | INFO     | [data] control thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:47,095 | INFO     | [job] validate thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:47,170 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 15:05:03] 2024-05-19 13:04:47,433 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:47,496 | INFO     | [job] control thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:47,550 | INFO     | [payload] failed_post thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:47,597 | INFO     | [data] copytool_in thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:47,597 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:47,778 | INFO     | [payload] control thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:47,939 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 15:05:03] 2024-05-19 13:04:48,006 | INFO     | [payload] validate_post thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:48,248 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:48,945 | INFO     | [job] queue monitor thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:49,175 | INFO     | [data] copytool_out thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:49,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 15:05:03] 2024-05-19 13:04:53,262 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:56,351 | INFO     | job.realtimelogging is not enabled
[2024-05-19 15:05:03] 2024-05-19 13:04:57,356 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 15:05:03] 2024-05-19 13:04:58,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47403963397184)>', '<ExcThread(monitor, started 47404140951296)>']
[2024-05-19 15:05:03] 2024-05-19 13:04:58,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 15:05:03] 2024-05-19 13:04:58,388 | INFO     | [monitor] control thread has ended
[2024-05-19 15:05:03] 2024-05-19 13:05:03,131 | INFO     | all workflow threads have been joined
[2024-05-19 15:05:03] 2024-05-19 13:05:03,131 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 15:05:03] 2024-05-19 13:05:03,131 | INFO     | traces error code: 0
[2024-05-19 15:05:03] 2024-05-19 13:05:03,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 15:05:03] 2024-05-19 13:05:03,205 [wrapper] ==== pilot stdout END ====
[2024-05-19 15:05:03] 2024-05-19 13:05:03,207 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 15:05:03] 2024-05-19 13:05:03,212 [wrapper] pilotpid: 3636974
[2024-05-19 15:05:03] 2024-05-19 13:05:03,215 [wrapper] Pilot exit status: 0
[2024-05-19 15:05:03] 2024-05-19 13:05:03,223 [wrapper] pandaids: 6207219887
[2024-05-19 15:05:03] 2024-05-19 13:05:03,280 [wrapper] cleanup: SIGTERM to supervisor_pilot 4008890 3636975
[2024-05-19 15:05:03] 2024-05-19 13:05:03,282 [wrapper] Test setup, not cleaning
[2024-05-19 15:05:03] 2024-05-19 13:05:03,284 [wrapper] ==== wrapper stdout END ====
[2024-05-19 15:05:03] 2024-05-19 13:05:03,287 [wrapper] ==== wrapper stderr END ====
[2024-05-19 15:05:03] 2024-05-19 13:05:03,298 [wrapper] apfmon messages muted
[2024-05-19 15:05:03]  *** Error codes and diagnostics ***
[2024-05-19 15:05:03]     "exeErrorCode": 0,
[2024-05-19 15:05:03]     "exeErrorDiag": "",
[2024-05-19 15:05:03]     "pilotErrorCode": 0,
[2024-05-19 15:05:03]     "pilotErrorDiag": "",
[2024-05-19 15:05:03]  *** Listing of results directory ***
[2024-05-19 15:05:03] total 838092
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc    467845 May 16 07:41 pilot3.tar.gz
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc      5633 May 16 07:43 queuedata.json
[2024-05-19 15:05:03] -rwx------ 1 boinc boinc     32251 May 16 07:43 runpilot2-wrapper.sh
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc       100 May 19 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 15:05:03] -rwxr-xr-x 1 boinc boinc      7986 May 19 11:01 run_atlas
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc       105 May 19 11:01 job.xml
[2024-05-19 15:05:03] -rw-r--r-- 2 boinc boinc 600720310 May 19 11:01 EVNT.38776119._000292.pool.root.1
[2024-05-19 15:05:03] -rw-r--r-- 2 boinc boinc     17537 May 19 11:01 start_atlas.sh
[2024-05-19 15:05:03] drwxrwx--x 2 boinc boinc      4096 May 19 11:01 shared
[2024-05-19 15:05:03] -rw-r--r-- 2 boinc boinc    480011 May 19 11:01 input.tar.gz
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc      6457 May 19 11:01 init_data.xml
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc         0 May 19 11:01 boinc_lockfile
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc      2634 May 19 11:01 pandaJob.out
[2024-05-19 15:05:03] -rw------- 1 boinc boinc       424 May 19 11:01 setup.sh.local
[2024-05-19 15:05:03] -rw------- 1 boinc boinc   1014045 May 19 11:01 agis_schedconf.cvmfs.json
[2024-05-19 15:05:03] -rw------- 1 boinc boinc   1324701 May 19 11:01 cric_ddmendpoints.json
[2024-05-19 15:05:03] drwx------ 4 boinc boinc      4096 May 19 11:01 pilot3
[2024-05-19 15:05:03] -rw------- 1 boinc boinc 250042999 May 19 15:04 HITS.38776125._012521.pool.root.1
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc       532 May 19 15:04 boinc_task_state.xml
[2024-05-19 15:05:03] -rw------- 1 boinc boinc        95 May 19 15:04 pilot_heartbeat.json
[2024-05-19 15:05:03] -rw------- 1 boinc boinc      1064 May 19 15:04 memory_monitor_summary.json
[2024-05-19 15:05:03] -rw------- 1 boinc boinc         0 May 19 15:04 agis_ddmendpoints.agis.ALL.json
[2024-05-19 15:05:03] -rw------- 1 boinc boinc    342586 May 19 15:04 log.38776125._012521.job.log.tgz.1
[2024-05-19 15:05:03] -rw------- 1 boinc boinc      7770 May 19 15:04 heartbeat.json
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc        28 May 19 15:04 wrapper_checkpoint.txt
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc      8192 May 19 15:04 boinc_mmap_file
[2024-05-19 15:05:03] -rw------- 1 boinc boinc      4294 May 19 15:05 pilotlog.txt
[2024-05-19 15:05:03] -rw------- 1 boinc boinc   1612977 May 19 15:05 log.38776125._012521.job.log.1
[2024-05-19 15:05:03] -rw------- 1 boinc boinc       357 May 19 15:05 output.list
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc       620 May 19 15:05 runtime_log
[2024-05-19 15:05:03] -rw------- 1 boinc boinc   1976320 May 19 15:05 result.tar.gz
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc     11410 May 19 15:05 runtime_log.err
[2024-05-19 15:05:03] -rw------- 1 boinc boinc       658 May 19 15:05 IYBODmH5iR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmFKPKDmP0Ytcm.diag
[2024-05-19 15:05:03] -rw-r--r-- 1 boinc boinc     21282 May 19 15:05 stderr.txt
[2024-05-19 15:05:03] HITS file was successfully produced:
[2024-05-19 15:05:03] -rw------- 1 boinc boinc 250042999 May 19 15:04 shared/HITS.pool.root.1
[2024-05-19 15:05:03]  *** Contents of shared directory: ***
[2024-05-19 15:05:03] total 833260
[2024-05-19 15:05:03] -rw-r--r-- 2 boinc boinc 600720310 May 19 11:01 ATLAS.root_0
[2024-05-19 15:05:03] -rw-r--r-- 2 boinc boinc     17537 May 19 11:01 start_atlas.sh
[2024-05-19 15:05:03] -rw-r--r-- 2 boinc boinc    480011 May 19 11:01 input.tar.gz
[2024-05-19 15:05:03] -rw------- 1 boinc boinc 250042999 May 19 15:04 HITS.pool.root.1
[2024-05-19 15:05:03] -rw------- 1 boinc boinc   1976320 May 19 15:05 result.tar.gz
15:05:05 (3632716): run_atlas exited; CPU time 55109.309398
15:05:05 (3632716): called boinc_finish(0)

</stderr_txt>
]]>

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