Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
21:01:40 (217083): wrapper (7.7.26015): starting
21:01:40 (217083): wrapper: running run_atlas (--nthreads 12)
[2024-05-16 21:01:40] Arguments: --nthreads 12
[2024-05-16 21:01:40] Threads: 12
[2024-05-16 21:01:40] Checking for CVMFS
[2024-05-16 21:01:40] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 21:01:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 21:01:40] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 21:01:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 21:01:41] 2.9.2.0 165920 182863 126664 132824 1 60 23010986 45568001 4436 130560 0 620624748 99.780 414659756 14127 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-16 21:01:41] CVMFS is ok
[2024-05-16 21:01:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 21:01:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 21:01:41] Further information can be found at the LHC@home message board.
[2024-05-16 21:01:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 21:01:41] Checking for apptainer binary...
[2024-05-16 21:01:41] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 21:01:41] Running /usr/bin/apptainer --version
[2024-05-16 21:01:41] apptainer version 1.1.8-1.el7
[2024-05-16 21:01:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 21:01:41] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0038.triumf.lcg
[2024-05-16 21:01:41] apptainer works
[2024-05-16 21:01:42] Set ATHENA_PROC_NUMBER=12
[2024-05-16 21:01:42] Set ATHENA_CORE_NUMBER=12
[2024-05-16 21:01:42] Starting ATLAS job with PandaID=6207171454
[2024-05-16 21:01:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 23:28:16]  *** The last 200 lines of the pilot log: ***
[2024-05-16 23:28:16] 2024-05-17 06:28:01,498 | INFO     | -- intersect: -103123025146.41992
[2024-05-16 23:28:16] 2024-05-17 06:28:01,499 | INFO     | intersect: -103123025146.41992
[2024-05-16 23:28:16] 2024-05-17 06:28:01,499 | INFO     | chi2: 2.118845674814046
[2024-05-16 23:28:16] 2024-05-17 06:28:01,499 | INFO     | current chi2=2.118845674814046 (change=54.50831543219606 %)
[2024-05-16 23:28:16] 2024-05-17 06:28:01,499 | INFO     | model: linear, x: [1715919169.0, 1715919230.0, 1715919291.0, 1715919352.0, 1715919413.0, 1715919474.0, 1715919535.0, 1715919596.0, 1715919657.0, 1715919718.0, 1715
[2024-05-16 23:28:16] 2024-05-17 06:28:01,500 | INFO     | sum of square deviations: 729472282.0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,500 | INFO     | sum of deviations: 19113129390.000015
[2024-05-16 23:28:16] 2024-05-17 06:28:01,501 | INFO     | mean x: 1715923195.0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,501 | INFO     | mean y: 2713922.6917293235
[2024-05-16 23:28:16] 2024-05-17 06:28:01,501 | INFO     | -- intersect: -44956721629.017456
[2024-05-16 23:28:16] 2024-05-17 06:28:01,501 | INFO     | intersect: -44956721629.017456
[2024-05-16 23:28:16] 2024-05-17 06:28:01,501 | INFO     | chi2: 0.6962054291713308
[2024-05-16 23:28:16] 2024-05-17 06:28:01,501 | INFO     | current chi2=0.6962054291713308 (change=67.14223043957973 %)
[2024-05-16 23:28:16] 2024-05-17 06:28:01,502 | INFO     | model: linear, x: [1715919474.0, 1715919535.0, 1715919596.0, 1715919657.0, 1715919718.0, 1715919779.0, 1715919840.0, 1715919901.0, 1715919962.0, 1715920023.0, 1715
[2024-05-16 23:28:16] 2024-05-17 06:28:01,502 | INFO     | sum of square deviations: 650252192.0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,503 | INFO     | sum of deviations: 1999398128.5
[2024-05-16 23:28:16] 2024-05-17 06:28:01,503 | INFO     | mean x: 1715923347.5
[2024-05-16 23:28:16] 2024-05-17 06:28:01,503 | INFO     | mean y: 2746478.9296875
[2024-05-16 23:28:16] 2024-05-17 06:28:01,503 | INFO     | -- intersect: -5273381724.634993
[2024-05-16 23:28:16] 2024-05-17 06:28:01,503 | INFO     | intersect: -5273381724.634993
[2024-05-16 23:28:16] 2024-05-17 06:28:01,504 | INFO     | chi2: 0.04213992496380475
[2024-05-16 23:28:16] 2024-05-17 06:28:01,504 | INFO     | current chi2=0.04213992496380475 (change=93.9471996054437 %)
[2024-05-16 23:28:16] 2024-05-17 06:28:01,504 | INFO     | model: linear, x: [1715919779.0, 1715919840.0, 1715919901.0, 1715919962.0, 1715920023.0, 1715920084.0, 1715920145.0, 1715920206.0, 1715920267.0, 1715920328.0, 1715
[2024-05-16 23:28:16] 2024-05-17 06:28:01,504 | INFO     | sum of square deviations: 576985702.0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,505 | INFO     | sum of deviations: -1932199217.0000002
[2024-05-16 23:28:16] 2024-05-17 06:28:01,505 | INFO     | mean x: 1715923500.0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,505 | INFO     | mean y: 2754571.4959349595
[2024-05-16 23:28:16] 2024-05-17 06:28:01,505 | INFO     | -- intersect: 5749007956.353468
[2024-05-16 23:28:16] 2024-05-17 06:28:01,505 | INFO     | intersect: 5749007956.353468
[2024-05-16 23:28:16] 2024-05-17 06:28:01,506 | INFO     | chi2: 0.005700985795888241
[2024-05-16 23:28:16] 2024-05-17 06:28:01,506 | INFO     | current chi2=0.005700985795888241 (change=86.47129580609128 %)
[2024-05-16 23:28:16] 2024-05-17 06:28:01,506 | INFO     | model: linear, x: [1715920084.0, 1715920145.0, 1715920206.0, 1715920267.0, 1715920328.0, 1715920389.0, 1715920450.0, 1715920511.0, 1715920572.0, 1715920633.0, 1715
[2024-05-16 23:28:16] 2024-05-17 06:28:01,506 | INFO     | sum of square deviations: 509440249.5
[2024-05-16 23:28:16] 2024-05-17 06:28:01,507 | INFO     | sum of deviations: -2768867317.499999
[2024-05-16 23:28:16] 2024-05-17 06:28:01,507 | INFO     | mean x: 1715923652.5
[2024-05-16 23:28:16] 2024-05-17 06:28:01,507 | INFO     | mean y: 2756455.3305084747
[2024-05-16 23:28:16] 2024-05-17 06:28:01,507 | INFO     | -- intersect: 9329002124.76004
[2024-05-16 23:28:16] 2024-05-17 06:28:01,507 | INFO     | intersect: 9329002124.76004
[2024-05-16 23:28:16] 2024-05-17 06:28:01,508 | INFO     | chi2: 0.003187188757854908
[2024-05-16 23:28:16] 2024-05-17 06:28:01,508 | INFO     | current chi2=0.003187188757854908 (change=44.094076498951736 %)
[2024-05-16 23:28:16] 2024-05-17 06:28:01,508 | INFO     | model: linear, x: [1715920389.0, 1715920450.0, 1715920511.0, 1715920572.0, 1715920633.0, 1715920694.0, 1715920755.0, 1715920816.0, 1715920877.0, 1715920938.0, 1715
[2024-05-16 23:28:16] 2024-05-17 06:28:01,508 | INFO     | sum of square deviations: 447383272.0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,509 | INFO     | sum of deviations: -2844635631.000001
[2024-05-16 23:28:16] 2024-05-17 06:28:01,509 | INFO     | mean x: 1715923805.0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,509 | INFO     | mean y: 2756632.592920354
[2024-05-16 23:28:16] 2024-05-17 06:28:01,509 | INFO     | -- intersect: 10913262906.023943
[2024-05-16 23:28:16] 2024-05-17 06:28:01,509 | INFO     | intersect: 10913262906.023943
[2024-05-16 23:28:16] 2024-05-17 06:28:01,510 | INFO     | chi2: 0.0026938349378854056
[2024-05-16 23:28:16] 2024-05-17 06:28:01,510 | INFO     | current chi2=0.0026938349378854056 (change=15.479278368864072 %)
[2024-05-16 23:28:16] 2024-05-17 06:28:01,510 | INFO     | left removable region: 60
[2024-05-16 23:28:16] 2024-05-17 06:28:01,510 | INFO     | model: linear, x: [1715922219.0, 1715922280.0, 1715922341.0, 1715922402.0, 1715922463.0, 1715922524.0, 1715922585.0, 1715922646.0, 1715922707.0, 1715922768.0, 1715
[2024-05-16 23:28:16] 2024-05-17 06:28:01,510 | INFO     | sum of square deviations: 141539398.0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,511 | INFO     | sum of deviations: -1131269277.9999998
[2024-05-16 23:28:16] 2024-05-17 06:28:01,511 | INFO     | mean x: 1715924537.0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,511 | INFO     | mean y: 2750617.051948052
[2024-05-16 23:28:16] 2024-05-17 06:28:01,511 | INFO     | -- intersect: 13717467081.187778
[2024-05-16 23:28:16] 2024-05-17 06:28:01,511 | INFO     | intersect: 13717467081.187778
[2024-05-16 23:28:16] 2024-05-17 06:28:01,511 | INFO     | chi2: 0.0018969618252330923
[2024-05-16 23:28:16] 2024-05-17 06:28:01,512 | INFO     | -- intersect: 13717467081.187778
[2024-05-16 23:28:16] 2024-05-17 06:28:01,512 | INFO     | current memory leak: -7.99 B/s (using 77 data points, chi2=0.00)
[2024-05-16 23:28:16] 2024-05-17 06:28:01,512 | INFO     | ..............................
[2024-05-16 23:28:16] 2024-05-17 06:28:01,512 | INFO     | . Timing measurements:
[2024-05-16 23:28:16] 2024-05-17 06:28:01,513 | INFO     | . get job = 0 s
[2024-05-16 23:28:16] 2024-05-17 06:28:01,513 | INFO     | . initial setup = 2 s
[2024-05-16 23:28:16] 2024-05-17 06:28:01,513 | INFO     | . payload setup = 9 s
[2024-05-16 23:28:16] 2024-05-17 06:28:01,513 | INFO     | . stage-in = 0 s
[2024-05-16 23:28:16] 2024-05-17 06:28:01,513 | INFO     | . payload execution = 8713 s
[2024-05-16 23:28:16] 2024-05-17 06:28:01,513 | INFO     | . stage-out = 1 s
[2024-05-16 23:28:16] 2024-05-17 06:28:01,513 | INFO     | . log creation = 0 s
[2024-05-16 23:28:16] 2024-05-17 06:28:01,513 | INFO     | ..............................
[2024-05-16 23:28:16] 2024-05-17 06:28:01,713 | INFO     | 
[2024-05-16 23:28:16] 2024-05-17 06:28:01,713 | INFO     | job summary report
[2024-05-16 23:28:16] 2024-05-17 06:28:01,713 | INFO     | --------------------------------------------------
[2024-05-16 23:28:16] 2024-05-17 06:28:01,713 | INFO     | PanDA job id: 6207171454
[2024-05-16 23:28:16] 2024-05-17 06:28:01,713 | INFO     | task id: 38921013
[2024-05-16 23:28:16] 2024-05-17 06:28:01,713 | INFO     | errors: (none)
[2024-05-16 23:28:16] 2024-05-17 06:28:01,714 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 23:28:16] 2024-05-17 06:28:01,714 | INFO     | pilot state: finished 
[2024-05-16 23:28:16] 2024-05-17 06:28:01,714 | INFO     | transexitcode: 0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,714 | INFO     | exeerrorcode: 0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,714 | INFO     | exeerrordiag: 
[2024-05-16 23:28:16] 2024-05-17 06:28:01,714 | INFO     | exitcode: 0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,714 | INFO     | exitmsg: OK
[2024-05-16 23:28:16] 2024-05-17 06:28:01,714 | INFO     | cpuconsumptiontime: 90691 s
[2024-05-16 23:28:16] 2024-05-17 06:28:01,714 | INFO     | nevents: 400
[2024-05-16 23:28:16] 2024-05-17 06:28:01,715 | INFO     | neventsw: 0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,715 | INFO     | pid: 248565
[2024-05-16 23:28:16] 2024-05-17 06:28:01,715 | INFO     | pgrp: 248565
[2024-05-16 23:28:16] 2024-05-17 06:28:01,715 | INFO     | corecount: 12
[2024-05-16 23:28:16] 2024-05-17 06:28:01,715 | INFO     | event service: False
[2024-05-16 23:28:16] 2024-05-17 06:28:01,715 | INFO     | sizes: {0: 2392158, 8: 2392364, 11: 2392392, 8727: 2420410, 8728: 2429364, 8730: 2429420, 8742: 2429718}
[2024-05-16 23:28:16] 2024-05-17 06:28:01,715 | INFO     | --------------------------------------------------
[2024-05-16 23:28:16] 2024-05-17 06:28:01,715 | INFO     | 
[2024-05-16 23:28:16] 2024-05-17 06:28:01,716 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-16 23:28:16] 2024-05-17 06:28:01,771 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,772 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,772 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,772 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,774 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 23:28:16] 2024-05-17 06:28:01,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,774 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 23:28:16] 2024-05-17 06:28:01,774 | INFO     | job 6207171454 has completed (purged errors)
[2024-05-16 23:28:16] 2024-05-17 06:28:01,775 | INFO     | overall cleanup function is called
[2024-05-16 23:28:16] 2024-05-17 06:28:02,784 | INFO     | --- collectZombieJob: --- 10, [248565]
[2024-05-16 23:28:16] 2024-05-17 06:28:02,785 | INFO     | zombie collector waiting for pid 248565
[2024-05-16 23:28:16] 2024-05-17 06:28:02,785 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 23:28:16] 2024-05-17 06:28:03,791 | INFO     | collected zombie processes
[2024-05-16 23:28:16] 2024-05-17 06:28:03,791 | INFO     | will now attempt to kill all subprocesses of pid=248565
[2024-05-16 23:28:16] 2024-05-17 06:28:03,943 | INFO     | process IDs to be killed: [248565] (in reverse order)
[2024-05-16 23:28:16] 2024-05-17 06:28:04,089 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 23:28:16] 2024-05-17 06:28:04,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 23:28:16] 2024-05-17 06:28:04,098 | INFO     | did not find any defunct processes belonging to 248565
[2024-05-16 23:28:16] 2024-05-17 06:28:04,105 | INFO     | did not find any defunct processes belonging to 248565
[2024-05-16 23:28:16] 2024-05-17 06:28:04,105 | INFO     | ready for new job
[2024-05-16 23:28:16] 2024-05-17 06:28:04,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 23:28:16] 2024-05-17 06:28:04,107 | INFO     | *************************************
[2024-05-16 23:28:16] 2024-05-17 06:28:04,108 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 23:28:16] 2024-05-17 06:28:04,108 | INFO     | *************************************
[2024-05-16 23:28:16] 2024-05-17 06:28:04,108 | INFO     | 
[2024-05-16 23:28:16] 2024-05-17 06:28:04,112 | INFO     | architecture information:
[2024-05-16 23:28:16] 2024-05-17 06:28:04,113 | INFO     | executing command: cat /etc/os-release
[2024-05-16 23:28:16] 2024-05-17 06:28:04,155 | INFO     | cat /etc/os-release:
[2024-05-16 23:28:16] NAME="CentOS Linux"
[2024-05-16 23:28:16] VERSION="7 (Core)"
[2024-05-16 23:28:16] ID="centos"
[2024-05-16 23:28:16] ID_LIKE="rhel fedora"
[2024-05-16 23:28:16] VERSION_ID="7"
[2024-05-16 23:28:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 23:28:16] ANSI_COLOR="0;31"
[2024-05-16 23:28:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 23:28:16] HOME_URL="https://www.centos.org/"
[2024-05-16 23:28:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 23:28:16] 
[2024-05-16 23:28:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 23:28:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 23:28:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 23:28:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 23:28:16] 
[2024-05-16 23:28:16] 2024-05-17 06:28:04,156 | INFO     | *************************************
[2024-05-16 23:28:16] 2024-05-17 06:28:04,659 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-16 23:28:16] 2024-05-17 06:28:04,702 | INFO     | sufficient remaining disk space (2128996204544 B)
[2024-05-16 23:28:16] 2024-05-17 06:28:04,703 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 23:28:16] 2024-05-17 06:28:04,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 23:28:16] 2024-05-17 06:28:04,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 23:28:16] 2024-05-17 06:28:05,270 | INFO     | all data control threads have been joined
[2024-05-16 23:28:16] 2024-05-17 06:28:05,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 23:28:16] 2024-05-17 06:28:05,426 | INFO     | aborting loop
[2024-05-16 23:28:16] 2024-05-17 06:28:05,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 23:28:16] 2024-05-17 06:28:05,558 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 23:28:16] 2024-05-17 06:28:05,559 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 23:28:16] 2024-05-17 06:28:05,559 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 23:28:16] 2024-05-17 06:28:05,709 | INFO     | [job] retrieve thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:05,887 | INFO     | all payload control threads have been joined
[2024-05-16 23:28:16] 2024-05-17 06:28:06,096 | INFO     | all job control threads have been joined
[2024-05-16 23:28:16] 2024-05-17 06:28:06,276 | INFO     | [data] control thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:06,317 | INFO     | [job] validate thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:06,318 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:06,434 | INFO     | [job] job monitor thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:06,470 | INFO     | [payload] validate_post thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:06,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 23:28:16] 2024-05-17 06:28:06,665 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:06,683 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:06,727 | INFO     | [payload] failed_post thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:06,869 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:06,893 | INFO     | [payload] control thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:07,019 | INFO     | [data] copytool_in thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:07,099 | INFO     | [job] control thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:07,553 | INFO     | [data] copytool_out thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:07,616 | INFO     | [job] queue monitor thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:08,710 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 23:28:16] 2024-05-17 06:28:10,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826728933184)>', '<ExcThread(monitor, started 139825940260608)>']
[2024-05-16 23:28:16] 2024-05-17 06:28:10,585 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 23:28:16] 2024-05-17 06:28:10,585 | INFO     | [monitor] control thread has ended
[2024-05-16 23:28:16] 2024-05-17 06:28:15,186 | INFO     | all workflow threads have been joined
[2024-05-16 23:28:16] 2024-05-17 06:28:15,186 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 23:28:16] 2024-05-17 06:28:15,187 | INFO     | traces error code: 0
[2024-05-16 23:28:16] 2024-05-17 06:28:15,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 23:28:16] 2024-05-17 06:28:15,292 [wrapper] ==== pilot stdout END ====
[2024-05-16 23:28:16] 2024-05-17 06:28:15,306 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 23:28:16] 2024-05-17 06:28:15,320 [wrapper] pilotpid: 228546
[2024-05-16 23:28:16] 2024-05-17 06:28:15,332 [wrapper] Pilot exit status: 0
[2024-05-16 23:28:16] 2024-05-17 06:28:15,371 [wrapper] pandaids: 6207171454
[2024-05-16 23:28:16] 2024-05-17 06:28:15,446 [wrapper] cleanup: SIGTERM to supervisor_pilot 268306 228547
[2024-05-16 23:28:16] 2024-05-17 06:28:15,459 [wrapper] Test setup, not cleaning
[2024-05-16 23:28:16] 2024-05-17 06:28:15,471 [wrapper] ==== wrapper stdout END ====
[2024-05-16 23:28:16] 2024-05-17 06:28:15,482 [wrapper] ==== wrapper stderr END ====
[2024-05-16 23:28:16] 2024-05-17 06:28:15,503 [wrapper] apfmon messages muted
[2024-05-16 23:28:16]  *** Error codes and diagnostics ***
[2024-05-16 23:28:16]     "exeErrorCode": 0,
[2024-05-16 23:28:16]     "exeErrorDiag": "",
[2024-05-16 23:28:16]     "pilotErrorCode": 0,
[2024-05-16 23:28:16]     "pilotErrorDiag": "",
[2024-05-16 23:28:16]  *** Listing of results directory ***
[2024-05-16 23:28:16] total 861576
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc      5633 May 15 21:52 queuedata.json
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc    467845 May 15 21:56 pilot3.tar.gz
[2024-05-16 23:28:16] -rwx------ 1 boinc boinc     32251 May 15 21:58 runpilot2-wrapper.sh
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc       100 May 16 21:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 23:28:16] -rwxr-xr-x 1 boinc boinc      7986 May 16 21:01 run_atlas
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc       105 May 16 21:01 job.xml
[2024-05-16 23:28:16] -rw-r--r-- 2 boinc boinc 539763719 May 16 21:01 EVNT.38776210._000046.pool.root.1
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc      6627 May 16 21:01 init_data.xml
[2024-05-16 23:28:16] -rw-r--r-- 2 boinc boinc     17537 May 16 21:01 start_atlas.sh
[2024-05-16 23:28:16] drwxrwx--x 2 boinc boinc      4096 May 16 21:01 shared
[2024-05-16 23:28:16] -rw-r--r-- 2 boinc boinc    480000 May 16 21:01 input.tar.gz
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc         0 May 16 21:01 boinc_lockfile
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc      2643 May 16 21:01 pandaJob.out
[2024-05-16 23:28:16] -rw------- 1 boinc boinc       424 May 16 21:01 setup.sh.local
[2024-05-16 23:28:16] -rw------- 1 boinc boinc   1019372 May 16 21:01 agis_schedconf.cvmfs.json
[2024-05-16 23:28:16] -rw------- 1 boinc boinc         0 May 16 21:01 agis_ddmendpoints.agis.ALL.json
[2024-05-16 23:28:16] -rw------- 1 boinc boinc   1324701 May 16 21:01 cric_ddmendpoints.json
[2024-05-16 23:28:16] drwx------ 4 boinc boinc      4096 May 16 21:02 pilot3
[2024-05-16 23:28:16] -rw------- 1 boinc boinc 336349107 May 16 23:27 HITS.38921013._001024.pool.root.1
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc       530 May 16 23:27 boinc_task_state.xml
[2024-05-16 23:28:16] -rw------- 1 boinc boinc        95 May 16 23:27 pilot_heartbeat.json
[2024-05-16 23:28:16] -rw------- 1 boinc boinc      1049 May 16 23:27 memory_monitor_summary.json
[2024-05-16 23:28:16] -rw------- 1 boinc boinc    423855 May 16 23:27 log.38921013._001024.job.log.tgz.1
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc      8192 May 16 23:27 boinc_mmap_file
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc        27 May 16 23:27 wrapper_checkpoint.txt
[2024-05-16 23:28:16] -rw------- 1 boinc boinc      7764 May 16 23:28 heartbeat.json
[2024-05-16 23:28:16] -rw------- 1 boinc boinc      4210 May 16 23:28 pilotlog.txt
[2024-05-16 23:28:16] -rw------- 1 boinc boinc    878559 May 16 23:28 log.38921013._001024.job.log.1
[2024-05-16 23:28:16] -rw------- 1 boinc boinc       357 May 16 23:28 output.list
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc       620 May 16 23:28 runtime_log
[2024-05-16 23:28:16] -rw------- 1 boinc boinc   1320960 May 16 23:28 result.tar.gz
[2024-05-16 23:28:16] -rw------- 1 boinc boinc       658 May 16 23:28 ueULDmJNiR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmC9JKDmSnNern.diag
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc     11286 May 16 23:28 runtime_log.err
[2024-05-16 23:28:16] -rw-r--r-- 1 boinc boinc     21857 May 16 23:28 stderr.txt
[2024-05-16 23:28:16] HITS file was successfully produced:
[2024-05-16 23:28:16] -rw------- 1 boinc boinc 336349107 May 16 23:27 shared/HITS.pool.root.1
[2024-05-16 23:28:16]  *** Contents of shared directory: ***
[2024-05-16 23:28:16] total 857376
[2024-05-16 23:28:16] -rw-r--r-- 2 boinc boinc 539763719 May 16 21:01 ATLAS.root_0
[2024-05-16 23:28:16] -rw-r--r-- 2 boinc boinc     17537 May 16 21:01 start_atlas.sh
[2024-05-16 23:28:16] -rw-r--r-- 2 boinc boinc    480000 May 16 21:01 input.tar.gz
[2024-05-16 23:28:16] -rw------- 1 boinc boinc 336349107 May 16 23:27 HITS.pool.root.1
[2024-05-16 23:28:16] -rw------- 1 boinc boinc   1320960 May 16 23:28 result.tar.gz
23:28:18 (217083): run_atlas exited; CPU time 90418.622301
23:28:18 (217083): called boinc_finish(0)

</stderr_txt>
]]>

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