Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-17 13:30:49 (22140): Detected: vboxwrapper 26206
2024-05-17 13:30:49 (22140): Detected: BOINC client v7.20.2
2024-05-17 13:30:49 (22140): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2024-05-17 13:30:50 (22140): Successfully copied 'init_data.xml' to the shared directory.
2024-05-17 13:30:50 (22140): Create VM. (boinc_52a8b28353313a75, slot#4)
2024-05-17 13:30:51 (22140): Setting Memory Size for VM. (4400MB)
2024-05-17 13:30:52 (22140): Setting CPU Count for VM. (4)
2024-05-17 13:30:53 (22140): Setting Chipset Options for VM.
2024-05-17 13:30:53 (22140): Setting Graphics Controller Options for VM.
2024-05-17 13:30:54 (22140): Setting Boot Options for VM.
2024-05-17 13:30:54 (22140): Setting Network Configuration for NAT.
2024-05-17 13:30:55 (22140): Enabling VM Network Access.
2024-05-17 13:30:56 (22140): Disabling USB Support for VM.
2024-05-17 13:30:56 (22140): Disabling COM Port Support for VM.
2024-05-17 13:30:57 (22140): Disabling LPT Port Support for VM.
2024-05-17 13:30:57 (22140): Disabling Audio Support for VM.
2024-05-17 13:30:58 (22140): Disabling Clipboard Support for VM.
2024-05-17 13:30:58 (22140): Disabling Drag and Drop Support for VM.
2024-05-17 13:30:59 (22140): Adding storage controller(s) to VM.
2024-05-17 13:30:59 (22140): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-17 13:31:04 (22140): Adding VirtualBox Guest Additions to VM.
2024-05-17 13:31:04 (22140): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-17 13:31:05 (22140): forwarding host port 60069 to guest port 80
2024-05-17 13:31:06 (22140): Enabling remote desktop for VM.
2024-05-17 13:31:07 (22140): Enabling shared directory for VM.
2024-05-17 13:31:08 (22140): Starting VM using VBoxManage interface. (boinc_52a8b28353313a75, slot#4)
2024-05-17 13:31:15 (22140): Successfully started VM. (PID = '21292')
2024-05-17 13:31:15 (22140): Reporting VM Process ID to BOINC.
2024-05-17 13:31:15 (22140): Guest Log: BIOS: VirtualBox 7.0.14
2024-05-17 13:31:15 (22140): Guest Log: CPUID EDX: 0x178bfbff
2024-05-17 13:31:15 (22140): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-17 13:31:15 (22140): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-17 13:31:15 (22140): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-17 13:31:15 (22140): Detected: Web Application Enabled (http://localhost:60069)
2024-05-17 13:31:15 (22140): Detected: Remote Desktop Enabled (localhost:60107)
2024-05-17 13:31:15 (22140): Preference change detected
2024-05-17 13:31:15 (22140): Setting CPU throttle for VM. (100%)
2024-05-17 13:31:16 (22140): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-17 13:31:17 (22140): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-17 13:31:17 (22140): Guest Log: BIOS: Booting from Hard Disk...
2024-05-17 13:31:21 (22140): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-17 13:31:21 (22140): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-17 13:31:21 (22140): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-17 13:31:39 (22140): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-17 13:31:39 (22140): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-17 13:32:47 (22140): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-17 13:32:47 (22140): Guest Log: 00:00:00.000190 main     Log opened 2024-05-17T13:32:45.452378000Z
2024-05-17 13:32:47 (22140): Guest Log: 00:00:00.000310 main     OS Product: Linux
2024-05-17 13:32:47 (22140): Guest Log: 00:00:00.000341 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-17 13:32:47 (22140): Guest Log: 00:00:00.000365 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-17 13:32:47 (22140): Guest Log: 00:00:00.000390 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-17 13:32:47 (22140): Guest Log: 00:00:00.000391 main     Process ID: 1334
2024-05-17 13:32:47 (22140): Guest Log: 00:00:00.000392 main     Package type: LINUX_64BITS_GENERIC
2024-05-17 13:32:47 (22140): Guest Log: 00:00:00.002642 main     5.2.32 r132073 started. Verbose level = 0
2024-05-17 13:32:48 (22140): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-17 13:32:48 (22140): Guest Log: [INFO] Mounting shared directory
2024-05-17 13:32:48 (22140): Guest Log: [INFO] Checking for init_data.xml
2024-05-17 13:32:55 (22140): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-17 13:32:55 (22140): Guest Log: [INFO] Detected branch: prod
2024-05-17 13:32:55 (22140): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-17 13:32:55 (22140): Guest Log: Copying input files
2024-05-17 13:32:58 (22140): Guest Log: 00:00:10.006120 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 088 724 000ns (GuestNow=1 715 949 177 369 273 000 ns GuestLast=1 715 952 765 457 997 000 ns fSetTimeLastLoop=true )
2024-05-17 13:33:11 (22140): Guest Log: Copied input files into RunAtlas.
2024-05-17 13:33:11 (22140): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.130:3128 - will set in /etc/cvmfs/default.local
2024-05-17 13:33:37 (22140): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-17 13:33:38 (22140): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-17 13:33:38 (22140): Guest Log: 2.6.3.0 1610 0 29616 132841 3 1 3116989 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.130:3128 1
2024-05-17 13:33:46 (22140): Guest Log: copied the webapp to /var/www
2024-05-17 13:33:46 (22140): Guest Log: ATHENA_PROC_NUMBER=4
2024-05-17 13:33:46 (22140): Guest Log: ATHENA_CORE_NUMBER=4
2024-05-17 13:33:46 (22140): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-17 13:33:46 (22140): Guest Log:  *** Starting ATLAS job. (PandaID=6207169993 taskID=38921013) ***
2024-05-17 15:11:29 (22140): Status Report: Elapsed Time: '6000.000000'
2024-05-17 15:11:29 (22140): Status Report: CPU Time: '19006.890625'
2024-05-17 16:51:47 (22140): Status Report: Elapsed Time: '12000.000000'
2024-05-17 16:51:47 (22140): Status Report: CPU Time: '42093.953125'
2024-05-17 18:31:56 (22140): Status Report: Elapsed Time: '18000.000000'
2024-05-17 18:31:56 (22140): Status Report: CPU Time: '65107.562500'
2024-05-17 20:12:16 (22140): Status Report: Elapsed Time: '24000.000000'
2024-05-17 20:12:16 (22140): Status Report: CPU Time: '81424.421875'
2024-05-17 21:52:30 (22140): Status Report: Elapsed Time: '30000.000000'
2024-05-17 21:52:30 (22140): Status Report: CPU Time: '100264.312500'
2024-05-17 23:32:50 (22140): Status Report: Elapsed Time: '36000.000000'
2024-05-17 23:32:50 (22140): Status Report: CPU Time: '114102.234375'
2024-05-18 01:13:12 (22140): Status Report: Elapsed Time: '42000.000000'
2024-05-18 01:13:12 (22140): Status Report: CPU Time: '128109.453125'
2024-05-18 02:53:26 (22140): Status Report: Elapsed Time: '48000.000000'
2024-05-18 02:53:26 (22140): Status Report: CPU Time: '145105.484375'
2024-05-18 04:33:45 (22140): Status Report: Elapsed Time: '54000.000000'
2024-05-18 04:33:45 (22140): Status Report: CPU Time: '157831.734375'
2024-05-18 06:14:02 (22140): Status Report: Elapsed Time: '60000.000000'
2024-05-18 06:14:02 (22140): Status Report: CPU Time: '179669.750000'
2024-05-18 06:43:32 (22140): Guest Log:  *** Job finished ***
2024-05-18 06:43:32 (22140): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:17,766 | INFO     | [data] queue_monitor thread has finished
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:21,450 | INFO     | job.realtimelogging is not enabled
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:22,529 | INFO     | [payload] run_realtimelog thread has finished
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:24,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789472732992)>', '<ExcThread(monitor, started 139788367689472)>']
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:25,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:25,718 | INFO     | [monitor] control thread has ended
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:29,954 | INFO     | all workflow threads have been joined
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:29,955 | INFO     | end of generic workflow (traces error code: 0)
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:29,955 | INFO     | traces error code: 0
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:29,955 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:30,087 [wrapper] ==== pilot stdout END ====
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:30,094 [wrapper] ==== wrapper stdout RESUME ====
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:30,102 [wrapper] pilotpid: 6498
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:30,109 [wrapper] Pilot exit status: 0
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:30,176 [wrapper] pandaids: 6207169993
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:30,223 [wrapper] cleanup: SIGTERM to supervisor_pilot 22380 6499
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:30,233 [wrapper] Test setup, not cleaning
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:30,243 [wrapper] ==== wrapper stdout END ====
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:30,254 [wrapper] ==== wrapper stderr END ====
2024-05-18 06:43:32 (22140): Guest Log: 2024-05-18 05:43:30,274 [wrapper] apfmon messages muted
2024-05-18 06:43:32 (22140): Guest Log:  *** Error codes and diagnostics ***
2024-05-18 06:43:32 (22140): Guest Log:     "exeErrorCode": 0,
2024-05-18 06:43:32 (22140): Guest Log:     "exeErrorDiag": "",
2024-05-18 06:43:32 (22140): Guest Log:     "pilotErrorCode": 0,
2024-05-18 06:43:32 (22140): Guest Log:     "pilotErrorDiag": "",
2024-05-18 06:43:32 (22140): Guest Log:  *** Listing of results directory ***
2024-05-18 06:43:32 (22140): Guest Log: total 354696
2024-05-18 06:43:32 (22140): Guest Log: -rw-r--r--. 1 atlas atlas    467845 May 16 03:11 pilot3.tar.gz
2024-05-18 06:43:32 (22140): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 16 03:46 queuedata.json
2024-05-18 06:43:32 (22140): Guest Log: -rwx------. 1 atlas atlas     32251 May 16 03:48 runpilot2-wrapper.sh
2024-05-18 06:43:32 (22140): Guest Log: -rwxr-xr-x. 1 atlas atlas      8986 May 17 12:32 init_data.xml
2024-05-18 06:43:32 (22140): Guest Log: -rwxr-xr-x. 1 atlas atlas    480004 May 17 12:32 input.tar.gz
2024-05-18 06:43:32 (22140): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 May 17 12:32 start_atlas.sh
2024-05-18 06:43:32 (22140): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 17 12:33 EVNT.38776210._000026.pool.root.1 -> /data/./ATLAS.root_0
2024-05-18 06:43:32 (22140): Guest Log: -rw-r--r--. 1 atlas atlas      2642 May 17 12:33 pandaJob.out
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas       460 May 17 12:33 setup.sh.local
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas   1019370 May 17 12:34 agis_schedconf.cvmfs.json
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas   1324701 May 17 12:34 cric_ddmendpoints.json
2024-05-18 06:43:32 (22140): Guest Log: drwx------. 4 atlas atlas      4096 May 17 12:34 pilot3
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas 345170552 May 18 05:41 HITS.38921013._000548.pool.root.1
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas        95 May 18 05:42 pilot_heartbeat.json
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas      1032 May 18 05:42 memory_monitor_summary.json
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas         0 May 18 05:42 agis_ddmendpoints.agis.ALL.json
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas    785789 May 18 05:42 log.38921013._000548.job.log.tgz.1
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas      7737 May 18 05:43 heartbeat.json
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas      4343 May 18 05:43 pilotlog.txt
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas   6500754 May 18 05:43 log.38921013._000548.job.log.1
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas       357 May 18 05:43 output.list
2024-05-18 06:43:32 (22140): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 18 05:43 runtime_log
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas   7301120 May 18 05:43 result.tar.gz
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas       647 May 18 05:43 yNDLDmFHhR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmTDPKDmO65vom.diag
2024-05-18 06:43:32 (22140): Guest Log: -rw-r--r--. 1 atlas atlas     11282 May 18 05:43 runtime_log.err
2024-05-18 06:43:32 (22140): Guest Log: Looking for outputfile HITS.38921013._000548.pool.root.1
2024-05-18 06:43:32 (22140): Guest Log: HITS file was successfully produced
2024-05-18 06:43:32 (22140): Guest Log: -rw-------. 1 atlas atlas 345170552 May 18 05:41 /home/atlas/RunAtlas/HITS.38921013._000548.pool.root.1
2024-05-18 06:43:34 (22140): Guest Log: Successfully finished the ATLAS job!
2024-05-18 06:43:34 (22140): Guest Log: Copying the results back to the shared directory!
2024-05-18 06:43:34 (22140): Guest Log:  *** Contents of shared directory: ***
2024-05-18 06:43:35 (22140): Guest Log: total 875024
2024-05-18 06:43:35 (22140): Guest Log: -rwxrwxrwx. 1 root root 543030116 May 17 12:30 ATLAS.root_0
2024-05-18 06:43:35 (22140): Guest Log: -rwxrwxrwx. 1 root root 345170552 May 18 05:43 HITS.pool.root.1
2024-05-18 06:43:35 (22140): Guest Log: -rwxrwxrwx. 1 root root      8986 May 17 12:30 init_data.xml
2024-05-18 06:43:35 (22140): Guest Log: -rwxrwxrwx. 1 root root    480004 May 16 10:36 input.tar.gz
2024-05-18 06:43:35 (22140): Guest Log: -rwxrwxrwx. 1 root root   7301120 May 18 05:43 result.tar.gz
2024-05-18 06:43:35 (22140): Guest Log: -rwxrwxrwx. 1 root root     17537 May 16 10:36 start_atlas.sh
2024-05-18 06:43:35 (22140): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-18 06:43:35 (22140): VM Completion File Detected.
2024-05-18 06:43:35 (22140): Powering off VM.
2024-05-18 06:43:36 (22140): Successfully stopped VM.
2024-05-18 06:43:36 (22140): Deregistering VM. (boinc_52a8b28353313a75, slot#4)
2024-05-18 06:43:36 (22140): Removing network bandwidth throttle group from VM.
2024-05-18 06:43:37 (22140): Removing VM from VirtualBox.
06:43:42 (22140): called boinc_finish(0)

</stderr_txt>
]]>

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