Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
20:04:52 (243386): wrapper (7.7.26015): starting
20:04:52 (243386): wrapper: running run_atlas (--nthreads 12)
[2024-05-16 20:04:52] Arguments: --nthreads 12
[2024-05-16 20:04:52] Threads: 12
[2024-05-16 20:04:52] Checking for CVMFS
[2024-05-16 20:04:52] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 20:04:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 20:04:52] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 20:04:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 20:04:53] 2.9.2.0 165920 182806 130028 132822 2 320 22911031 45568000 4436 130560 0 620540034 99.780 414620343 14126 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-16 20:04:53] CVMFS is ok
[2024-05-16 20:04:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 20:04:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 20:04:53] Further information can be found at the LHC@home message board.
[2024-05-16 20:04:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 20:04:53] Checking for apptainer binary...
[2024-05-16 20:04:53] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 20:04:53] Running /usr/bin/apptainer --version
[2024-05-16 20:04:53] apptainer version 1.1.8-1.el7
[2024-05-16 20:04:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 20:04:53] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0038.triumf.lcg
[2024-05-16 20:04:53] apptainer works
[2024-05-16 20:04:53] Set ATHENA_PROC_NUMBER=12
[2024-05-16 20:04:53] Set ATHENA_CORE_NUMBER=12
[2024-05-16 20:04:54] Starting ATLAS job with PandaID=6207159438
[2024-05-16 20:04:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 21:01:35]  *** The last 200 lines of the pilot log: ***
[2024-05-16 21:01:35]  guid=536627aa-0450-40f3-ae58-a15f3bca619b
[2024-05-16 21:01:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-16 21:01:35]  is_tar=False
[2024-05-16 21:01:35]  lfn=log.38776125._012414.job.log.tgz.1
[2024-05-16 21:01:35]  mtime=0
[2024-05-16 21:01:35]  protocol_id=None
[2024-05-16 21:01:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-16 21:01:35]  replicas=None
[2024-05-16 21:01:35]  scope=mc23_13p6TeV
[2024-05-16 21:01:35]  status=None
[2024-05-16 21:01:35]  status_code=0
[2024-05-16 21:01:35]  storage_token=
[2024-05-16 21:01:35]  surl=/home/boinc/slots/0/PanDA_Pilot-6207159438/log.38776125._012414.job.log.tgz.1
[2024-05-16 21:01:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/ea/log.38776125._012414.job.log.tgz.1
[2024-05-16 21:01:35]  workdir=None
[2024-05-16 21:01:35] ]
[2024-05-16 21:01:35] 2024-05-17 04:01:08,562 | INFO     | transferring file log.38776125._012414.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6207159438/log.38776125._012414.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-16 21:01:35] 2024-05-17 04:01:08,562 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6207159438/log.38776125._012414.job.log.tgz.1 /home/boinc/slots/0/log.38776125._012414.job.log.t
[2024-05-16 21:01:35] 2024-05-17 04:01:08,618 | INFO     | adding to output.list: log.38776125._012414.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/ea/log.38776125._012414.job.log.tg
[2024-05-16 21:01:35] 2024-05-17 04:01:08,618 | INFO     | summary of transferred files:
[2024-05-16 21:01:35] 2024-05-17 04:01:08,618 | INFO     |  -- lfn=log.38776125._012414.job.log.tgz.1, status_code=0, status=transferred
[2024-05-16 21:01:35] 2024-05-17 04:01:08,618 | INFO     | stage-out finished correctly
[2024-05-16 21:01:35] 2024-05-17 04:01:09,604 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-16 21:01:35] 2024-05-17 04:01:10,364 | INFO     | monitor loop #267: job 0:6207159438 is in state 'finished'
[2024-05-16 21:01:35] 2024-05-17 04:01:10,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 21:01:35] 2024-05-17 04:01:11,992 | INFO     | job 6207159438 has state=finished
[2024-05-16 21:01:35] 2024-05-17 04:01:11,993 | INFO     | preparing for final server update for job 6207159438 in state='finished'
[2024-05-16 21:01:35] 2024-05-17 04:01:11,994 | INFO     | this job has now completed (state=finished)
[2024-05-16 21:01:35] 2024-05-17 04:01:11,994 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-16 21:01:35] 2024-05-17 04:01:11,994 | INFO     | job 6207159438 has finished - writing final server update
[2024-05-16 21:01:35] 2024-05-17 04:01:11,994 | INFO     | total number of processed events: 400 (read)
[2024-05-16 21:01:35] 2024-05-17 04:01:12,001 | INFO     | executing command: lscpu
[2024-05-16 21:01:35] 2024-05-17 04:01:12,088 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-16 21:01:35] 2024-05-17 04:01:12,089 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-16 21:01:35] 2024-05-17 04:01:12,185 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-16 21:01:35] 2024-05-17 04:01:12,867 | INFO     | monitor loop #268: job 0:6207159438 is in state 'finished'
[2024-05-16 21:01:35] 2024-05-17 04:01:12,869 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 21:01:35] 2024-05-17 04:01:15,371 | INFO     | monitor loop #269: job 0:6207159438 is in state 'finished'
[2024-05-16 21:01:35] 2024-05-17 04:01:15,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 21:01:35] 2024-05-17 04:01:17,874 | INFO     | monitor loop #270: job 0:6207159438 is in state 'finished'
[2024-05-16 21:01:35] 2024-05-17 04:01:17,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 21:01:35] 2024-05-17 04:01:20,311 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-16 21:01:35] 2024-05-17 04:01:20,312 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6207159438/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 21:01:35] 2024-05-17 04:01:20,313 | INFO     | extracted standard info from prmon json
[2024-05-16 21:01:35] 2024-05-17 04:01:20,313 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 21:01:35] 2024-05-17 04:01:20,313 | WARNING  | GPU info not found in prmon json
[2024-05-16 21:01:35] 2024-05-17 04:01:20,313 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 21:01:35] 2024-05-17 04:01:20,313 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 21:01:35] 2024-05-17 04:01:20,314 | INFO     | fitting pss+swap vs Time
[2024-05-16 21:01:35] 2024-05-17 04:01:20,314 | INFO     | model: linear, x: [1715915456.0, 1715915517.0, 1715915578.0, 1715915639.0, 1715915700.0, 1715915761.0, 1715915822.0, 1715915883.0, 1715915944.0, 1715916005.0, 1715
[2024-05-16 21:01:35] 2024-05-17 04:01:20,314 | INFO     | sum of square deviations: 34277852.0
[2024-05-16 21:01:35] 2024-05-17 04:01:20,315 | INFO     | sum of deviations: 16806445713.5
[2024-05-16 21:01:35] 2024-05-17 04:01:20,315 | INFO     | mean x: 1715916889.5
[2024-05-16 21:01:35] 2024-05-17 04:01:20,315 | INFO     | mean y: 2510649.1875
[2024-05-16 21:01:35] 2024-05-17 04:01:20,315 | INFO     | -- intersect: -841312285046.2816
[2024-05-16 21:01:35] 2024-05-17 04:01:20,315 | INFO     | intersect: -841312285046.2816
[2024-05-16 21:01:35] 2024-05-17 04:01:20,315 | INFO     | chi2: 1.8354344736245396
[2024-05-16 21:01:35] 2024-05-17 04:01:20,315 | INFO     | -- intersect: -841312285046.2816
[2024-05-16 21:01:35] 2024-05-17 04:01:20,315 | INFO     | current memory leak: 490.30 B/s (using 48 data points, chi2=1.84)
[2024-05-16 21:01:35] 2024-05-17 04:01:20,315 | INFO     | ..............................
[2024-05-16 21:01:35] 2024-05-17 04:01:20,316 | INFO     | . Timing measurements:
[2024-05-16 21:01:35] 2024-05-17 04:01:20,316 | INFO     | . get job = 0 s
[2024-05-16 21:01:35] 2024-05-17 04:01:20,316 | INFO     | . initial setup = 2 s
[2024-05-16 21:01:35] 2024-05-17 04:01:20,316 | INFO     | . payload setup = 9 s
[2024-05-16 21:01:35] 2024-05-17 04:01:20,316 | INFO     | . stage-in = 0 s
[2024-05-16 21:01:35] 2024-05-17 04:01:20,316 | INFO     | . payload execution = 3322 s
[2024-05-16 21:01:35] 2024-05-17 04:01:20,316 | INFO     | . stage-out = 0 s
[2024-05-16 21:01:35] 2024-05-17 04:01:20,316 | INFO     | . log creation = 0 s
[2024-05-16 21:01:35] 2024-05-17 04:01:20,316 | INFO     | ..............................
[2024-05-16 21:01:35] 2024-05-17 04:01:20,374 | INFO     | 
[2024-05-16 21:01:35] 2024-05-17 04:01:20,374 | INFO     | job summary report
[2024-05-16 21:01:35] 2024-05-17 04:01:20,374 | INFO     | --------------------------------------------------
[2024-05-16 21:01:35] 2024-05-17 04:01:20,374 | INFO     | PanDA job id: 6207159438
[2024-05-16 21:01:35] 2024-05-17 04:01:20,374 | INFO     | task id: 38776125
[2024-05-16 21:01:35] 2024-05-17 04:01:20,374 | INFO     | errors: (none)
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | pilot state: finished 
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | transexitcode: 0
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | exeerrorcode: 0
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | exeerrordiag: 
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | exitcode: 0
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | exitmsg: OK
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | cpuconsumptiontime: 28800 s
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | nevents: 400
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | neventsw: 0
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | pid: 272469
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | pgrp: 272469
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | corecount: 12
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | event service: False
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | sizes: {0: 2392191, 9: 2392397, 11: 2392425, 3336: 2417863, 3337: 2426817, 3338: 2426873, 3349: 2427171}
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | --------------------------------------------------
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | 
[2024-05-16 21:01:35] 2024-05-17 04:01:20,375 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-16 21:01:35] 2024-05-17 04:01:20,423 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,423 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,423 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,425 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 21:01:35] 2024-05-17 04:01:20,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,425 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 21:01:35] 2024-05-17 04:01:20,425 | INFO     | job 6207159438 has completed (purged errors)
[2024-05-16 21:01:35] 2024-05-17 04:01:20,425 | INFO     | overall cleanup function is called
[2024-05-16 21:01:35] 2024-05-17 04:01:21,433 | INFO     | --- collectZombieJob: --- 10, [272469]
[2024-05-16 21:01:35] 2024-05-17 04:01:21,433 | INFO     | zombie collector waiting for pid 272469
[2024-05-16 21:01:35] 2024-05-17 04:01:21,434 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 21:01:35] 2024-05-17 04:01:22,434 | INFO     | collected zombie processes
[2024-05-16 21:01:35] 2024-05-17 04:01:22,435 | INFO     | will now attempt to kill all subprocesses of pid=272469
[2024-05-16 21:01:35] 2024-05-17 04:01:22,571 | INFO     | process IDs to be killed: [272469] (in reverse order)
[2024-05-16 21:01:35] 2024-05-17 04:01:22,731 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 21:01:35] 2024-05-17 04:01:22,731 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 21:01:35] 2024-05-17 04:01:22,740 | INFO     | did not find any defunct processes belonging to 272469
[2024-05-16 21:01:35] 2024-05-17 04:01:22,747 | INFO     | did not find any defunct processes belonging to 272469
[2024-05-16 21:01:35] 2024-05-17 04:01:22,747 | INFO     | ready for new job
[2024-05-16 21:01:35] 2024-05-17 04:01:22,747 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 21:01:35] 2024-05-17 04:01:22,749 | INFO     | *************************************
[2024-05-16 21:01:35] 2024-05-17 04:01:22,749 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 21:01:35] 2024-05-17 04:01:22,750 | INFO     | *************************************
[2024-05-16 21:01:35] 2024-05-17 04:01:22,750 | INFO     | 
[2024-05-16 21:01:35] 2024-05-17 04:01:22,754 | INFO     | architecture information:
[2024-05-16 21:01:35] 2024-05-17 04:01:22,754 | INFO     | executing command: cat /etc/os-release
[2024-05-16 21:01:35] 2024-05-17 04:01:22,796 | INFO     | cat /etc/os-release:
[2024-05-16 21:01:35] NAME="CentOS Linux"
[2024-05-16 21:01:35] VERSION="7 (Core)"
[2024-05-16 21:01:35] ID="centos"
[2024-05-16 21:01:35] ID_LIKE="rhel fedora"
[2024-05-16 21:01:35] VERSION_ID="7"
[2024-05-16 21:01:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 21:01:35] ANSI_COLOR="0;31"
[2024-05-16 21:01:35] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 21:01:35] HOME_URL="https://www.centos.org/"
[2024-05-16 21:01:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 21:01:35] 
[2024-05-16 21:01:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 21:01:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 21:01:35] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 21:01:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 21:01:35] 
[2024-05-16 21:01:35] 2024-05-17 04:01:22,797 | INFO     | *************************************
[2024-05-16 21:01:35] 2024-05-17 04:01:23,298 | INFO     | 3373s have passed since pilot start
[2024-05-16 21:01:35] 2024-05-17 04:01:23,301 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-16 21:01:35] 2024-05-17 04:01:23,341 | INFO     | sufficient remaining disk space (2127279685632 B)
[2024-05-16 21:01:35] 2024-05-17 04:01:23,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 21:01:35] 2024-05-17 04:01:23,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 21:01:35] 2024-05-17 04:01:23,362 | INFO     | all job control threads have been joined
[2024-05-16 21:01:35] 2024-05-17 04:01:23,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 21:01:35] 2024-05-17 04:01:23,889 | INFO     | aborting loop
[2024-05-16 21:01:35] 2024-05-17 04:01:23,956 | INFO     | all data control threads have been joined
[2024-05-16 21:01:35] 2024-05-17 04:01:24,186 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 21:01:35] 2024-05-17 04:01:24,303 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 21:01:35] 2024-05-17 04:01:24,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 21:01:35] 2024-05-17 04:01:24,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 21:01:35] 2024-05-17 04:01:24,348 | INFO     | [job] retrieve thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:24,368 | INFO     | [job] control thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:24,469 | INFO     | all payload control threads have been joined
[2024-05-16 21:01:35] 2024-05-17 04:01:24,487 | INFO     | [payload] validate_post thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:24,675 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:24,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 21:01:35] 2024-05-17 04:01:24,863 | INFO     | [data] copytool_in thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:24,895 | INFO     | [job] job monitor thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:24,904 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:24,906 | INFO     | [job] validate thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:24,962 | INFO     | [data] control thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:25,060 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:25,172 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:25,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 21:01:35] 2024-05-17 04:01:25,475 | INFO     | [payload] control thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:25,519 | INFO     | [payload] failed_post thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:26,192 | INFO     | [data] copytool_out thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:26,390 | INFO     | [job] queue monitor thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:28,717 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 21:01:35] 2024-05-17 04:01:29,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139740382943040)>', '<ExcThread(monitor, started 139739965413120)>']
[2024-05-16 21:01:35] 2024-05-17 04:01:29,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 21:01:35] 2024-05-17 04:01:29,331 | INFO     | [monitor] control thread has ended
[2024-05-16 21:01:35] 2024-05-17 04:01:34,192 | INFO     | all workflow threads have been joined
[2024-05-16 21:01:35] 2024-05-17 04:01:34,193 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 21:01:35] 2024-05-17 04:01:34,193 | INFO     | traces error code: 0
[2024-05-16 21:01:35] 2024-05-17 04:01:34,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 21:01:35] 2024-05-17 04:01:34,297 [wrapper] ==== pilot stdout END ====
[2024-05-16 21:01:35] 2024-05-17 04:01:34,308 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 21:01:35] 2024-05-17 04:01:34,318 [wrapper] pilotpid: 253983
[2024-05-16 21:01:35] 2024-05-17 04:01:34,327 [wrapper] Pilot exit status: 0
[2024-05-16 21:01:35] 2024-05-17 04:01:34,367 [wrapper] pandaids: 6207159438
[2024-05-16 21:01:35] 2024-05-17 04:01:34,444 [wrapper] cleanup: SIGTERM to supervisor_pilot 162420 253985
[2024-05-16 21:01:35] 2024-05-17 04:01:34,457 [wrapper] Test setup, not cleaning
[2024-05-16 21:01:35] 2024-05-17 04:01:34,466 [wrapper] ==== wrapper stdout END ====
[2024-05-16 21:01:35] 2024-05-17 04:01:34,472 [wrapper] ==== wrapper stderr END ====
[2024-05-16 21:01:35] 2024-05-17 04:01:34,484 [wrapper] apfmon messages muted
[2024-05-16 21:01:35]  *** Error codes and diagnostics ***
[2024-05-16 21:01:35]     "exeErrorCode": 0,
[2024-05-16 21:01:35]     "exeErrorDiag": "",
[2024-05-16 21:01:35]     "pilotErrorCode": 0,
[2024-05-16 21:01:35]     "pilotErrorDiag": "",
[2024-05-16 21:01:35]  *** Listing of results directory ***
[2024-05-16 21:01:35] total 837392
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc    467845 May 15 20:11 pilot3.tar.gz
[2024-05-16 21:01:35] -rwx------ 1 boinc boinc     32251 May 15 20:29 runpilot2-wrapper.sh
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc      5633 May 15 20:29 queuedata.json
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc       100 May 16 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 21:01:35] -rwxr-xr-x 1 boinc boinc      7986 May 16 20:04 run_atlas
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc       105 May 16 20:04 job.xml
[2024-05-16 21:01:35] -rw-r--r-- 2 boinc boinc 603553490 May 16 20:04 EVNT.38776119._000251.pool.root.1
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc      6627 May 16 20:04 init_data.xml
[2024-05-16 21:01:35] -rw-r--r-- 2 boinc boinc     17537 May 16 20:04 start_atlas.sh
[2024-05-16 21:01:35] drwxrwx--x 2 boinc boinc      4096 May 16 20:04 shared
[2024-05-16 21:01:35] -rw-r--r-- 2 boinc boinc    480015 May 16 20:04 input.tar.gz
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc         0 May 16 20:04 boinc_lockfile
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc      2633 May 16 20:04 pandaJob.out
[2024-05-16 21:01:35] -rw------- 1 boinc boinc       424 May 16 20:04 setup.sh.local
[2024-05-16 21:01:35] -rw------- 1 boinc boinc   1019310 May 16 20:05 agis_schedconf.cvmfs.json
[2024-05-16 21:01:35] -rw------- 1 boinc boinc         0 May 16 20:05 agis_ddmendpoints.agis.ALL.json
[2024-05-16 21:01:35] -rw------- 1 boinc boinc   1324701 May 16 20:05 cric_ddmendpoints.json
[2024-05-16 21:01:35] drwx------ 4 boinc boinc      4096 May 16 20:05 pilot3
[2024-05-16 21:01:35] -rw------- 1 boinc boinc 249013841 May 16 21:00 HITS.38776125._012414.pool.root.1
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc       531 May 16 21:00 boinc_task_state.xml
[2024-05-16 21:01:35] -rw------- 1 boinc boinc      1042 May 16 21:01 memory_monitor_summary.json
[2024-05-16 21:01:35] -rw------- 1 boinc boinc    347337 May 16 21:01 log.38776125._012414.job.log.tgz.1
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc      8192 May 16 21:01 boinc_mmap_file
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc        27 May 16 21:01 wrapper_checkpoint.txt
[2024-05-16 21:01:35] -rw------- 1 boinc boinc        95 May 16 21:01 pilot_heartbeat.json
[2024-05-16 21:01:35] -rw------- 1 boinc boinc      7755 May 16 21:01 heartbeat.json
[2024-05-16 21:01:35] -rw------- 1 boinc boinc      4283 May 16 21:01 pilotlog.txt
[2024-05-16 21:01:35] -rw------- 1 boinc boinc    348030 May 16 21:01 log.38776125._012414.job.log.1
[2024-05-16 21:01:35] -rw------- 1 boinc boinc       357 May 16 21:01 output.list
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc       620 May 16 21:01 runtime_log
[2024-05-16 21:01:35] -rw------- 1 boinc boinc    716800 May 16 21:01 result.tar.gz
[2024-05-16 21:01:35] -rw------- 1 boinc boinc       655 May 16 21:01 tqvMDm8ygR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmtBPKDm1o1JIn.diag
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc     11286 May 16 21:01 runtime_log.err
[2024-05-16 21:01:35] -rw-r--r-- 1 boinc boinc     21784 May 16 21:01 stderr.txt
[2024-05-16 21:01:35] HITS file was successfully produced:
[2024-05-16 21:01:35] -rw------- 1 boinc boinc 249013841 May 16 21:00 shared/HITS.pool.root.1
[2024-05-16 21:01:35]  *** Contents of shared directory: ***
[2024-05-16 21:01:35] total 833788
[2024-05-16 21:01:35] -rw-r--r-- 2 boinc boinc 603553490 May 16 20:04 ATLAS.root_0
[2024-05-16 21:01:35] -rw-r--r-- 2 boinc boinc     17537 May 16 20:04 start_atlas.sh
[2024-05-16 21:01:35] -rw-r--r-- 2 boinc boinc    480015 May 16 20:04 input.tar.gz
[2024-05-16 21:01:35] -rw------- 1 boinc boinc 249013841 May 16 21:00 HITS.pool.root.1
[2024-05-16 21:01:35] -rw------- 1 boinc boinc    716800 May 16 21:01 result.tar.gz
21:01:36 (243386): run_atlas exited; CPU time 28705.364269
21:01:36 (243386): called boinc_finish(0)

</stderr_txt>
]]>

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