Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:36:44 (2408167): wrapper (7.7.26015): starting
06:36:44 (2408167): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 06:36:44] Arguments: --nthreads 4
[2024-05-18 06:36:44] Threads: 4
[2024-05-18 06:36:44] Checking for CVMFS
[2024-05-18 06:36:44] No cvmfs_config command found, will try listing directly
[2024-05-18 06:36:44] CVMFS is ok
[2024-05-18 06:36:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 06:36:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 06:36:44] Further information can be found at the LHC@home message board.
[2024-05-18 06:36:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 06:36:44] Checking for apptainer binary...
[2024-05-18 06:36:44] which: no apptainer in ((null))
[2024-05-18 06:36:44] apptainer is not installed, using version from CVMFS
[2024-05-18 06:36:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 06:36:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2024-05-18 06:36:45] apptainer works
[2024-05-18 06:36:45] Set ATHENA_PROC_NUMBER=4
[2024-05-18 06:36:45] Set ATHENA_CORE_NUMBER=4
[2024-05-18 06:36:45] Starting ATLAS job with PandaID=6207158004
[2024-05-18 06:36:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 09:22:29]  *** The last 200 lines of the pilot log: ***
[2024-05-18 09:22:29] 2024-05-18 07:22:14,776 | INFO     | intersect: -53643412143.982666
[2024-05-18 09:22:29] 2024-05-18 07:22:14,776 | INFO     | chi2: 3.705305495405333
[2024-05-18 09:22:29] 2024-05-18 07:22:14,777 | INFO     | model: linear, x: [1716007038.0, 1716007099.0, 1716007160.0, 1716007221.0, 1716007282.0, 1716007343.0, 1716007404.0, 1716007465.0, 1716007526.0, 1716007587.0, 1716
[2024-05-18 09:22:29] 2024-05-18 07:22:14,777 | INFO     | sum of square deviations: 1199940638.0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,777 | INFO     | sum of deviations: 40068423583.0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,777 | INFO     | mean x: 1716011796.0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,777 | INFO     | mean y: 2318432.108280255
[2024-05-18 09:22:29] 2024-05-18 07:22:14,777 | INFO     | -- intersect: -57298755752.82367
[2024-05-18 09:22:29] 2024-05-18 07:22:14,777 | INFO     | intersect: -57298755752.82367
[2024-05-18 09:22:29] 2024-05-18 07:22:14,778 | INFO     | chi2: 3.7109474874791744
[2024-05-18 09:22:29] 2024-05-18 07:22:14,778 | INFO     | current chi2=3.7109474874791744 (change=-0.15226793258579444 %)
[2024-05-18 09:22:29] 2024-05-18 07:22:14,778 | INFO     | right removable region: 156
[2024-05-18 09:22:29] 2024-05-18 07:22:14,778 | INFO     | model: linear, x: [1716007343.0, 1716007404.0, 1716007465.0, 1716007526.0, 1716007587.0, 1716007648.0, 1716007709.0, 1716007770.0, 1716007831.0, 1716007892.0, 1716
[2024-05-18 09:22:29] 2024-05-18 07:22:14,778 | INFO     | sum of square deviations: 1199940638.0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,779 | INFO     | sum of deviations: 6375535963.000002
[2024-05-18 09:22:29] 2024-05-18 07:22:14,779 | INFO     | mean x: 1716012101.0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,779 | INFO     | mean y: 2364598.6050955416
[2024-05-18 09:22:29] 2024-05-18 07:22:14,779 | INFO     | -- intersect: -9115167149.551844
[2024-05-18 09:22:29] 2024-05-18 07:22:14,779 | INFO     | intersect: -9115167149.551844
[2024-05-18 09:22:29] 2024-05-18 07:22:14,779 | INFO     | chi2: 1.4046313607078447
[2024-05-18 09:22:29] 2024-05-18 07:22:14,779 | INFO     | current chi2=1.4046313607078447 (change=62.09134813716113 %)
[2024-05-18 09:22:29] 2024-05-18 07:22:14,779 | INFO     | model: linear, x: [1716007648.0, 1716007709.0, 1716007770.0, 1716007831.0, 1716007892.0, 1716007953.0, 1716008014.0, 1716008075.0, 1716008136.0, 1716008197.0, 1716
[2024-05-18 09:22:29] 2024-05-18 07:22:14,779 | INFO     | sum of square deviations: 1088905998.0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,780 | INFO     | sum of deviations: -19726049368.499996
[2024-05-18 09:22:29] 2024-05-18 07:22:14,780 | INFO     | mean x: 1716012253.5
[2024-05-18 09:22:29] 2024-05-18 07:22:14,780 | INFO     | mean y: 2400453.4671052634
[2024-05-18 09:22:29] 2024-05-18 07:22:14,780 | INFO     | -- intersect: 31088777506.825874
[2024-05-18 09:22:29] 2024-05-18 07:22:14,780 | INFO     | intersect: 31088777506.825874
[2024-05-18 09:22:29] 2024-05-18 07:22:14,780 | INFO     | chi2: 0.20556415949728404
[2024-05-18 09:22:29] 2024-05-18 07:22:14,780 | INFO     | current chi2=0.20556415949728404 (change=85.36525915285752 %)
[2024-05-18 09:22:29] 2024-05-18 07:22:14,781 | INFO     | model: linear, x: [1716007953.0, 1716008014.0, 1716008075.0, 1716008136.0, 1716008197.0, 1716008258.0, 1716008319.0, 1716008380.0, 1716008441.0, 1716008502.0, 1716
[2024-05-18 09:22:29] 2024-05-18 07:22:14,781 | INFO     | sum of square deviations: 984941258.0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,781 | INFO     | sum of deviations: -20413965492.000004
[2024-05-18 09:22:29] 2024-05-18 07:22:14,781 | INFO     | mean x: 1716012406.0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,781 | INFO     | mean y: 2401331.993197279
[2024-05-18 09:22:29] 2024-05-18 07:22:14,781 | INFO     | -- intersect: 35568601605.764145
[2024-05-18 09:22:29] 2024-05-18 07:22:14,781 | INFO     | intersect: 35568601605.764145
[2024-05-18 09:22:29] 2024-05-18 07:22:14,781 | INFO     | chi2: 0.1537142221778092
[2024-05-18 09:22:29] 2024-05-18 07:22:14,782 | INFO     | current chi2=0.1537142221778092 (change=25.223238061671882 %)
[2024-05-18 09:22:29] 2024-05-18 07:22:14,782 | INFO     | model: linear, x: [1716008258.0, 1716008319.0, 1716008380.0, 1716008441.0, 1716008502.0, 1716008563.0, 1716008624.0, 1716008685.0, 1716008746.0, 1716008807.0, 1716
[2024-05-18 09:22:29] 2024-05-18 07:22:14,782 | INFO     | sum of square deviations: 887813855.5
[2024-05-18 09:22:29] 2024-05-18 07:22:14,782 | INFO     | sum of deviations: -15991279899.499998
[2024-05-18 09:22:29] 2024-05-18 07:22:14,782 | INFO     | mean x: 1716012558.5
[2024-05-18 09:22:29] 2024-05-18 07:22:14,782 | INFO     | mean y: 2394382.415492958
[2024-05-18 09:22:29] 2024-05-18 07:22:14,782 | INFO     | -- intersect: 30911167616.84111
[2024-05-18 09:22:29] 2024-05-18 07:22:14,783 | INFO     | intersect: 30911167616.84111
[2024-05-18 09:22:29] 2024-05-18 07:22:14,783 | INFO     | chi2: 0.1436323802560757
[2024-05-18 09:22:29] 2024-05-18 07:22:14,783 | INFO     | current chi2=0.1436323802560757 (change=6.558821805097069 %)
[2024-05-18 09:22:29] 2024-05-18 07:22:14,783 | INFO     | left removable region: 40
[2024-05-18 09:22:29] 2024-05-18 07:22:14,783 | INFO     | model: linear, x: [1716009478.0, 1716009539.0, 1716009600.0, 1716009661.0, 1716009722.0, 1716009783.0, 1716009844.0, 1716009905.0, 1716009966.0, 1716010027.0, 1716
[2024-05-18 09:22:29] 2024-05-18 07:22:14,783 | INFO     | sum of square deviations: 483971865.0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,783 | INFO     | sum of deviations: 1515242379.0000002
[2024-05-18 09:22:29] 2024-05-18 07:22:14,783 | INFO     | mean x: 1716012985.5
[2024-05-18 09:22:29] 2024-05-18 07:22:14,784 | INFO     | mean y: 2361677.275862069
[2024-05-18 09:22:29] 2024-05-18 07:22:14,784 | INFO     | -- intersect: -5370214264.806872
[2024-05-18 09:22:29] 2024-05-18 07:22:14,784 | INFO     | intersect: -5370214264.806872
[2024-05-18 09:22:29] 2024-05-18 07:22:14,784 | INFO     | chi2: 0.00039278681384445326
[2024-05-18 09:22:29] 2024-05-18 07:22:14,784 | INFO     | -- intersect: -5370214264.806872
[2024-05-18 09:22:29] 2024-05-18 07:22:14,784 | INFO     | current memory leak: 3.13 B/s (using 116 data points, chi2=0.00)
[2024-05-18 09:22:29] 2024-05-18 07:22:14,785 | INFO     | ..............................
[2024-05-18 09:22:29] 2024-05-18 07:22:14,785 | INFO     | . Timing measurements:
[2024-05-18 09:22:29] 2024-05-18 07:22:14,785 | INFO     | . get job = 0 s
[2024-05-18 09:22:29] 2024-05-18 07:22:14,785 | INFO     | . initial setup = 1 s
[2024-05-18 09:22:29] 2024-05-18 07:22:14,785 | INFO     | . payload setup = 5 s
[2024-05-18 09:22:29] 2024-05-18 07:22:14,785 | INFO     | . stage-in = 0 s
[2024-05-18 09:22:29] 2024-05-18 07:22:14,785 | INFO     | . payload execution = 9885 s
[2024-05-18 09:22:29] 2024-05-18 07:22:14,785 | INFO     | . stage-out = 0 s
[2024-05-18 09:22:29] 2024-05-18 07:22:14,785 | INFO     | . log creation = 0 s
[2024-05-18 09:22:29] 2024-05-18 07:22:14,785 | INFO     | ..............................
[2024-05-18 09:22:29] 2024-05-18 07:22:14,843 | INFO     | 
[2024-05-18 09:22:29] 2024-05-18 07:22:14,843 | INFO     | job summary report
[2024-05-18 09:22:29] 2024-05-18 07:22:14,843 | INFO     | --------------------------------------------------
[2024-05-18 09:22:29] 2024-05-18 07:22:14,843 | INFO     | PanDA job id: 6207158004
[2024-05-18 09:22:29] 2024-05-18 07:22:14,843 | INFO     | task id: 38776125
[2024-05-18 09:22:29] 2024-05-18 07:22:14,843 | INFO     | errors: (none)
[2024-05-18 09:22:29] 2024-05-18 07:22:14,844 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 09:22:29] 2024-05-18 07:22:14,844 | INFO     | pilot state: finished 
[2024-05-18 09:22:29] 2024-05-18 07:22:14,844 | INFO     | transexitcode: 0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,844 | INFO     | exeerrorcode: 0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,844 | INFO     | exeerrordiag: 
[2024-05-18 09:22:29] 2024-05-18 07:22:14,844 | INFO     | exitcode: 0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,844 | INFO     | exitmsg: OK
[2024-05-18 09:22:29] 2024-05-18 07:22:14,844 | INFO     | cpuconsumptiontime: 36542 s
[2024-05-18 09:22:29] 2024-05-18 07:22:14,844 | INFO     | nevents: 400
[2024-05-18 09:22:29] 2024-05-18 07:22:14,845 | INFO     | neventsw: 0
[2024-05-18 09:22:29] 2024-05-18 07:22:14,845 | INFO     | pid: 2419219
[2024-05-18 09:22:29] 2024-05-18 07:22:14,845 | INFO     | pgrp: 2419219
[2024-05-18 09:22:29] 2024-05-18 07:22:14,845 | INFO     | corecount: 4
[2024-05-18 09:22:29] 2024-05-18 07:22:14,845 | INFO     | event service: False
[2024-05-18 09:22:29] 2024-05-18 07:22:14,845 | INFO     | sizes: {0: 2392256, 4: 2392462, 11: 2392490, 9893: 2421104, 9895: 2430086, 9898: 2430142, 9905: 2430440}
[2024-05-18 09:22:29] 2024-05-18 07:22:14,845 | INFO     | --------------------------------------------------
[2024-05-18 09:22:29] 2024-05-18 07:22:14,845 | INFO     | 
[2024-05-18 09:22:29] 2024-05-18 07:22:14,846 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/1
[2024-05-18 09:22:29] 2024-05-18 07:22:14,869 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,869 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,869 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,869 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,869 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,870 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,871 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 09:22:29] 2024-05-18 07:22:14,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,871 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 09:22:29] 2024-05-18 07:22:14,871 | INFO     | job 6207158004 has completed (purged errors)
[2024-05-18 09:22:29] 2024-05-18 07:22:14,872 | INFO     | overall cleanup function is called
[2024-05-18 09:22:29] 2024-05-18 07:22:15,880 | INFO     | --- collectZombieJob: --- 10, [2419219]
[2024-05-18 09:22:29] 2024-05-18 07:22:15,880 | INFO     | zombie collector waiting for pid 2419219
[2024-05-18 09:22:29] 2024-05-18 07:22:15,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 09:22:29] 2024-05-18 07:22:16,886 | INFO     | collected zombie processes
[2024-05-18 09:22:29] 2024-05-18 07:22:16,886 | INFO     | will now attempt to kill all subprocesses of pid=2419219
[2024-05-18 09:22:29] 2024-05-18 07:22:16,973 | INFO     | process IDs to be killed: [2419219] (in reverse order)
[2024-05-18 09:22:29] 2024-05-18 07:22:17,054 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 09:22:29] 2024-05-18 07:22:17,055 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 09:22:29] 2024-05-18 07:22:17,062 | INFO     | did not find any defunct processes belonging to 2419219
[2024-05-18 09:22:29] 2024-05-18 07:22:17,069 | INFO     | did not find any defunct processes belonging to 2419219
[2024-05-18 09:22:29] 2024-05-18 07:22:17,070 | INFO     | ready for new job
[2024-05-18 09:22:29] 2024-05-18 07:22:17,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 09:22:29] 2024-05-18 07:22:17,073 | INFO     | *************************************
[2024-05-18 09:22:29] 2024-05-18 07:22:17,074 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 09:22:29] 2024-05-18 07:22:17,074 | INFO     | *************************************
[2024-05-18 09:22:29] 2024-05-18 07:22:17,074 | INFO     | 
[2024-05-18 09:22:29] 2024-05-18 07:22:17,077 | INFO     | architecture information:
[2024-05-18 09:22:29] 2024-05-18 07:22:17,077 | INFO     | executing command: cat /etc/os-release
[2024-05-18 09:22:29] 2024-05-18 07:22:17,090 | INFO     | cat /etc/os-release:
[2024-05-18 09:22:29] NAME="CentOS Linux"
[2024-05-18 09:22:29] VERSION="7 (Core)"
[2024-05-18 09:22:29] ID="centos"
[2024-05-18 09:22:29] ID_LIKE="rhel fedora"
[2024-05-18 09:22:29] VERSION_ID="7"
[2024-05-18 09:22:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 09:22:29] ANSI_COLOR="0;31"
[2024-05-18 09:22:29] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 09:22:29] HOME_URL="https://www.centos.org/"
[2024-05-18 09:22:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 09:22:29] 
[2024-05-18 09:22:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 09:22:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 09:22:29] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 09:22:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 09:22:29] 
[2024-05-18 09:22:29] 2024-05-18 07:22:17,091 | INFO     | *************************************
[2024-05-18 09:22:29] 2024-05-18 07:22:17,594 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/1
[2024-05-18 09:22:29] 2024-05-18 07:22:17,615 | INFO     | sufficient remaining disk space (1614850031616 B)
[2024-05-18 09:22:29] 2024-05-18 07:22:17,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 09:22:29] 2024-05-18 07:22:17,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 09:22:29] 2024-05-18 07:22:17,616 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 09:22:29] 2024-05-18 07:22:17,617 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 09:22:29] 2024-05-18 07:22:17,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 09:22:29] 2024-05-18 07:22:17,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 09:22:29] 2024-05-18 07:22:17,809 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 09:22:29] 2024-05-18 07:22:17,898 | INFO     | all payload control threads have been joined
[2024-05-18 09:22:29] 2024-05-18 07:22:17,948 | INFO     | all data control threads have been joined
[2024-05-18 09:22:29] 2024-05-18 07:22:17,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 09:22:29] 2024-05-18 07:22:17,955 | INFO     | aborting loop
[2024-05-18 09:22:29] 2024-05-18 07:22:18,546 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 09:22:29] 2024-05-18 07:22:18,621 | INFO     | [job] retrieve thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:18,763 | INFO     | all job control threads have been joined
[2024-05-18 09:22:29] 2024-05-18 07:22:18,769 | INFO     | [job] validate thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:18,774 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:18,903 | INFO     | [payload] control thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:18,927 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:18,953 | INFO     | [data] control thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:18,960 | INFO     | [job] job monitor thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:19,178 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:19,667 | INFO     | [data] copytool_in thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:19,671 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:19,769 | INFO     | [job] control thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:19,814 | INFO     | [data] copytool_out thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:19,845 | INFO     | [payload] validate_post thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:19,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 09:22:29] 2024-05-18 07:22:20,140 | INFO     | [payload] failed_post thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:20,853 | INFO     | [job] queue monitor thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:22,552 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 09:22:29] 2024-05-18 07:22:23,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47549086811200)>', '<ExcThread(monitor, started 47549394212608)>']
[2024-05-18 09:22:29] 2024-05-18 07:22:24,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 09:22:29] 2024-05-18 07:22:24,649 | INFO     | [monitor] control thread has ended
[2024-05-18 09:22:29] 2024-05-18 07:22:28,689 | INFO     | all workflow threads have been joined
[2024-05-18 09:22:29] 2024-05-18 07:22:28,689 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 09:22:29] 2024-05-18 07:22:28,690 | INFO     | traces error code: 0
[2024-05-18 09:22:29] 2024-05-18 07:22:28,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 09:22:29] 2024-05-18 07:22:28,777 [wrapper] ==== pilot stdout END ====
[2024-05-18 09:22:29] 2024-05-18 07:22:28,780 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 09:22:29] 2024-05-18 07:22:28,783 [wrapper] pilotpid: 2412398
[2024-05-18 09:22:29] 2024-05-18 07:22:28,786 [wrapper] Pilot exit status: 0
[2024-05-18 09:22:29] 2024-05-18 07:22:28,796 [wrapper] pandaids: 6207158004
[2024-05-18 09:22:29] 2024-05-18 07:22:28,853 [wrapper] cleanup: SIGTERM to supervisor_pilot 2553854 2412399
[2024-05-18 09:22:29] 2024-05-18 07:22:28,857 [wrapper] Test setup, not cleaning
[2024-05-18 09:22:29] 2024-05-18 07:22:28,859 [wrapper] ==== wrapper stdout END ====
[2024-05-18 09:22:29] 2024-05-18 07:22:28,863 [wrapper] ==== wrapper stderr END ====
[2024-05-18 09:22:29] 2024-05-18 07:22:28,869 [wrapper] apfmon messages muted
[2024-05-18 09:22:29]  *** Error codes and diagnostics ***
[2024-05-18 09:22:29]     "exeErrorCode": 0,
[2024-05-18 09:22:29]     "exeErrorDiag": "",
[2024-05-18 09:22:29]     "pilotErrorCode": 0,
[2024-05-18 09:22:29]     "pilotErrorDiag": "",
[2024-05-18 09:22:29]  *** Listing of results directory ***
[2024-05-18 09:22:29] total 819724
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc    467845 May 16 05:11 pilot3.tar.gz
[2024-05-18 09:22:29] -rwx------ 1 boinc boinc     32251 May 16 05:26 runpilot2-wrapper.sh
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc      5633 May 16 05:26 queuedata.json
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc       100 May 18 06:36 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 09:22:29] -rwxr-xr-x 1 boinc boinc      7986 May 18 06:36 run_atlas
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc       105 May 18 06:36 job.xml
[2024-05-18 09:22:29] -rw-r--r-- 2 boinc boinc 597817294 May 18 06:36 EVNT.38776119._000194.pool.root.1
[2024-05-18 09:22:29] -rw-r--r-- 2 boinc boinc     17537 May 18 06:36 start_atlas.sh
[2024-05-18 09:22:29] drwxrwx--x 2 boinc boinc      4096 May 18 06:36 shared
[2024-05-18 09:22:29] -rw-r--r-- 2 boinc boinc    480010 May 18 06:36 input.tar.gz
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc      6456 May 18 06:36 init_data.xml
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc         0 May 18 06:36 boinc_lockfile
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc      2634 May 18 06:36 pandaJob.out
[2024-05-18 09:22:29] -rw------- 1 boinc boinc       424 May 18 06:36 setup.sh.local
[2024-05-18 09:22:29] -rw------- 1 boinc boinc   1019065 May 18 06:36 agis_schedconf.cvmfs.json
[2024-05-18 09:22:29] -rw------- 1 boinc boinc         0 May 18 06:36 agis_ddmendpoints.agis.ALL.json
[2024-05-18 09:22:29] -rw------- 1 boinc boinc   1324701 May 18 06:36 cric_ddmendpoints.json
[2024-05-18 09:22:29] drwx------ 4 boinc boinc      4096 May 18 06:36 pilot3
[2024-05-18 09:22:29] -rw------- 1 boinc boinc        95 May 18 09:21 pilot_heartbeat.json
[2024-05-18 09:22:29] -rw------- 1 boinc boinc 235322803 May 18 09:21 HITS.38776125._012376.pool.root.1
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc       530 May 18 09:21 boinc_task_state.xml
[2024-05-18 09:22:29] -rw------- 1 boinc boinc      1051 May 18 09:21 memory_monitor_summary.json
[2024-05-18 09:22:29] -rw------- 1 boinc boinc    309463 May 18 09:22 log.38776125._012376.job.log.tgz.1
[2024-05-18 09:22:29] -rw------- 1 boinc boinc      7770 May 18 09:22 heartbeat.json
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc      8192 May 18 09:22 boinc_mmap_file
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc        27 May 18 09:22 wrapper_checkpoint.txt
[2024-05-18 09:22:29] -rw------- 1 boinc boinc      4345 May 18 09:22 pilotlog.txt
[2024-05-18 09:22:29] -rw------- 1 boinc boinc   1050419 May 18 09:22 log.38776125._012376.job.log.1
[2024-05-18 09:22:29] -rw------- 1 boinc boinc       357 May 18 09:22 output.list
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc       620 May 18 09:22 runtime_log
[2024-05-18 09:22:29] -rw------- 1 boinc boinc   1382400 May 18 09:22 result.tar.gz
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc     11409 May 18 09:22 runtime_log.err
[2024-05-18 09:22:29] -rw------- 1 boinc boinc       656 May 18 09:22 KscNDmBwgR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmcBPKDmmVC2To.diag
[2024-05-18 09:22:29] -rw-r--r-- 1 boinc boinc     21347 May 18 09:22 stderr.txt
[2024-05-18 09:22:29] HITS file was successfully produced:
[2024-05-18 09:22:29] -rw------- 1 boinc boinc 235322803 May 18 09:21 shared/HITS.pool.root.1
[2024-05-18 09:22:29]  *** Contents of shared directory: ***
[2024-05-18 09:22:29] total 815468
[2024-05-18 09:22:29] -rw-r--r-- 2 boinc boinc 597817294 May 18 06:36 ATLAS.root_0
[2024-05-18 09:22:29] -rw-r--r-- 2 boinc boinc     17537 May 18 06:36 start_atlas.sh
[2024-05-18 09:22:29] -rw-r--r-- 2 boinc boinc    480010 May 18 06:36 input.tar.gz
[2024-05-18 09:22:29] -rw------- 1 boinc boinc 235322803 May 18 09:21 HITS.pool.root.1
[2024-05-18 09:22:29] -rw------- 1 boinc boinc   1382400 May 18 09:22 result.tar.gz
09:22:31 (2408167): run_atlas exited; CPU time 36182.510715
09:22:31 (2408167): called boinc_finish(0)

</stderr_txt>
]]>

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