Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:12:02 (17994): wrapper (7.7.26015): starting
04:12:02 (17994): wrapper: running run_atlas (--nthreads 8)
[2024-05-16 04:12:02] Arguments: --nthreads 8
[2024-05-16 04:12:02] Threads: 8
[2024-05-16 04:12:02] Checking for CVMFS
[2024-05-16 04:12:03] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 04:12:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 04:12:03] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 04:12:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 04:12:04] 2.11.2.0 52735 1266 87988 132791 2 207 15118012 18432001 19562 130560 0 9088079 98.604 24197523 53457 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-05-16 04:12:04] CVMFS is ok
[2024-05-16 04:12:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 04:12:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 04:12:04] Further information can be found at the LHC@home message board.
[2024-05-16 04:12:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 04:12:04] Checking for apptainer binary...
[2024-05-16 04:12:04] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 04:12:04] Running /usr/bin/apptainer --version
[2024-05-16 04:12:04] apptainer version 1.3.0-1.el7
[2024-05-16 04:12:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 04:12:08] c-212-5.aglt2.org
[2024-05-16 04:12:08] apptainer works
[2024-05-16 04:12:08] Set ATHENA_PROC_NUMBER=8
[2024-05-16 04:12:08] Set ATHENA_CORE_NUMBER=8
[2024-05-16 04:12:08] Starting ATLAS job with PandaID=6207150938
[2024-05-16 04:12:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 08:04:44]  *** The last 200 lines of the pilot log: ***
[2024-05-16 08:04:44] 2024-05-16 12:03:37,775 | INFO     | job 6207150938 has state=finished
[2024-05-16 08:04:44] 2024-05-16 12:03:37,775 | INFO     | preparing for final server update for job 6207150938 in state='finished'
[2024-05-16 08:04:44] 2024-05-16 12:03:37,776 | INFO     | this job has now completed (state=finished)
[2024-05-16 08:04:44] 2024-05-16 12:03:37,776 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-16 08:04:44] 2024-05-16 12:03:37,776 | INFO     | job 6207150938 has finished - writing final server update
[2024-05-16 08:04:44] 2024-05-16 12:03:37,776 | INFO     | total number of processed events: 400 (read)
[2024-05-16 08:04:44] 2024-05-16 12:03:37,799 | INFO     | executing command: lscpu
[2024-05-16 08:04:44] 2024-05-16 12:03:38,034 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-16 08:04:44] 2024-05-16 12:03:38,035 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-16 08:04:44] 2024-05-16 12:03:38,346 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-16 08:04:44] 2024-05-16 12:04:16,866 | INFO     | 13870s have passed since pilot start
[2024-05-16 08:04:44] 2024-05-16 12:04:19,756 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-16 08:04:44] 2024-05-16 12:04:19,756 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6207150938/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 08:04:44] 2024-05-16 12:04:19,757 | INFO     | extracted standard info from prmon json
[2024-05-16 08:04:44] 2024-05-16 12:04:19,758 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 08:04:44] 2024-05-16 12:04:19,758 | WARNING  | GPU info not found in prmon json
[2024-05-16 08:04:44] 2024-05-16 12:04:19,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 08:04:44] 2024-05-16 12:04:19,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 08:04:44] 2024-05-16 12:04:19,762 | INFO     | fitting pss+swap vs Time
[2024-05-16 08:04:44] 2024-05-16 12:04:19,762 | INFO     | model: linear, x: [1715847312.0, 1715847373.0, 1715847434.0, 1715847495.0, 1715847556.0, 1715847617.0, 1715847678.0, 1715847739.0, 1715847800.0, 1715847861.0, 1715
[2024-05-16 08:04:44] 2024-05-16 12:04:19,763 | INFO     | sum of square deviations: 3531970767.840007
[2024-05-16 08:04:44] 2024-05-16 12:04:19,764 | INFO     | sum of deviations: 357378350836.1333
[2024-05-16 08:04:44] 2024-05-16 12:04:19,764 | INFO     | mean x: 1715854144.0266666
[2024-05-16 08:04:44] 2024-05-16 12:04:19,764 | INFO     | mean y: 2238217.311111111
[2024-05-16 08:04:44] 2024-05-16 12:04:19,764 | INFO     | -- intersect: -173614466046.24265
[2024-05-16 08:04:44] 2024-05-16 12:04:19,764 | INFO     | intersect: -173614466046.24265
[2024-05-16 08:04:44] 2024-05-16 12:04:19,765 | INFO     | chi2: 13.472162567732612
[2024-05-16 08:04:44] 2024-05-16 12:04:19,765 | INFO     | model: linear, x: [1715847312.0, 1715847373.0, 1715847434.0, 1715847495.0, 1715847556.0, 1715847617.0, 1715847678.0, 1715847739.0, 1715847800.0, 1715847861.0, 1715
[2024-05-16 08:04:44] 2024-05-16 12:04:19,765 | INFO     | sum of square deviations: 3301698512.8363748
[2024-05-16 08:04:44] 2024-05-16 12:04:19,766 | INFO     | sum of deviations: 362515572115.2545
[2024-05-16 08:04:44] 2024-05-16 12:04:19,766 | INFO     | mean x: 1715853991.5272727
[2024-05-16 08:04:44] 2024-05-16 12:04:19,766 | INFO     | mean y: 2241437.290909091
[2024-05-16 08:04:44] 2024-05-16 12:04:19,766 | INFO     | -- intersect: -188392849448.94305
[2024-05-16 08:04:44] 2024-05-16 12:04:19,766 | INFO     | intersect: -188392849448.94305
[2024-05-16 08:04:44] 2024-05-16 12:04:19,767 | INFO     | chi2: 12.443020012567105
[2024-05-16 08:04:44] 2024-05-16 12:04:19,767 | INFO     | current chi2=12.443020012567105 (change=7.639030111100515 %)
[2024-05-16 08:04:44] 2024-05-16 12:04:19,767 | INFO     | right removable region: 219
[2024-05-16 08:04:44] 2024-05-16 12:04:19,767 | INFO     | model: linear, x: [1715847617.0, 1715847678.0, 1715847739.0, 1715847800.0, 1715847861.0, 1715847922.0, 1715847983.0, 1715848044.0, 1715848105.0, 1715848166.0, 1715
[2024-05-16 08:04:44] 2024-05-16 12:04:19,780 | INFO     | sum of square deviations: 3301694852.8363748
[2024-05-16 08:04:44] 2024-05-16 12:04:19,781 | INFO     | sum of deviations: 298542912244.30884
[2024-05-16 08:04:44] 2024-05-16 12:04:19,781 | INFO     | mean x: 1715854296.5272727
[2024-05-16 08:04:44] 2024-05-16 12:04:19,781 | INFO     | mean y: 2277102.2818181817
[2024-05-16 08:04:44] 2024-05-16 12:04:19,781 | INFO     | -- intersect: -155147172348.5358
[2024-05-16 08:04:44] 2024-05-16 12:04:19,782 | INFO     | intersect: -155147172348.5358
[2024-05-16 08:04:44] 2024-05-16 12:04:19,782 | INFO     | chi2: 10.704069498118173
[2024-05-16 08:04:44] 2024-05-16 12:04:19,782 | INFO     | current chi2=10.704069498118173 (change=20.546761187727515 %)
[2024-05-16 08:04:44] 2024-05-16 12:04:19,782 | INFO     | left removable region: 10
[2024-05-16 08:04:44] 2024-05-16 12:04:19,782 | INFO     | model: linear, x: [1715847922.0, 1715847983.0, 1715848044.0, 1715848105.0, 1715848166.0, 1715848227.0, 1715848288.0, 1715848349.0, 1715848410.0, 1715848471.0, 1715
[2024-05-16 08:04:44] 2024-05-16 12:04:19,782 | INFO     | sum of square deviations: 2830784063.827756
[2024-05-16 08:04:44] 2024-05-16 12:04:19,783 | INFO     | sum of deviations: 257469354851.60773
[2024-05-16 08:04:44] 2024-05-16 12:04:19,784 | INFO     | mean x: 1715854266.0287082
[2024-05-16 08:04:44] 2024-05-16 12:04:19,784 | INFO     | mean y: 2313523.7320574163
[2024-05-16 08:04:44] 2024-05-16 12:04:19,784 | INFO     | -- intersect: -156060417130.62253
[2024-05-16 08:04:44] 2024-05-16 12:04:19,784 | INFO     | intersect: -156060417130.62253
[2024-05-16 08:04:44] 2024-05-16 12:04:19,784 | INFO     | chi2: 8.350406283439433
[2024-05-16 08:04:44] 2024-05-16 12:04:19,784 | INFO     | -- intersect: -156060417130.62253
[2024-05-16 08:04:44] 2024-05-16 12:04:19,784 | INFO     | current memory leak: 90.95 B/s (using 209 data points, chi2=8.35)
[2024-05-16 08:04:44] 2024-05-16 12:04:19,785 | INFO     | ..............................
[2024-05-16 08:04:44] 2024-05-16 12:04:19,785 | INFO     | . Timing measurements:
[2024-05-16 08:04:44] 2024-05-16 12:04:19,785 | INFO     | . get job = 0 s
[2024-05-16 08:04:44] 2024-05-16 12:04:19,785 | INFO     | . initial setup = 3 s
[2024-05-16 08:04:44] 2024-05-16 12:04:19,785 | INFO     | . payload setup = 28 s
[2024-05-16 08:04:44] 2024-05-16 12:04:19,785 | INFO     | . stage-in = 0 s
[2024-05-16 08:04:44] 2024-05-16 12:04:19,786 | INFO     | . payload execution = 13733 s
[2024-05-16 08:04:44] 2024-05-16 12:04:19,786 | INFO     | . stage-out = 2 s
[2024-05-16 08:04:44] 2024-05-16 12:04:19,786 | INFO     | . log creation = 0 s
[2024-05-16 08:04:44] 2024-05-16 12:04:19,786 | INFO     | ..............................
[2024-05-16 08:04:44] 2024-05-16 12:04:19,873 | INFO     | 
[2024-05-16 08:04:44] 2024-05-16 12:04:19,873 | INFO     | job summary report
[2024-05-16 08:04:44] 2024-05-16 12:04:19,873 | INFO     | --------------------------------------------------
[2024-05-16 08:04:44] 2024-05-16 12:04:19,873 | INFO     | PanDA job id: 6207150938
[2024-05-16 08:04:44] 2024-05-16 12:04:19,873 | INFO     | task id: 38776104
[2024-05-16 08:04:44] 2024-05-16 12:04:19,873 | INFO     | errors: (none)
[2024-05-16 08:04:44] 2024-05-16 12:04:19,873 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | pilot state: finished 
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | transexitcode: 0
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | exeerrorcode: 0
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | exeerrordiag: 
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | exitcode: 0
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | exitmsg: OK
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | cpuconsumptiontime: 37528 s
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | nevents: 400
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | neventsw: 0
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | pid: 64350
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | pgrp: 64350
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | corecount: 8
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | event service: False
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | sizes: {0: 2392201, 11: 2392201, 22: 2392229, 25: 2392463, 32: 2392491, 13766: 2422530, 13769: 2431546, 13812: 2431660}
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | --------------------------------------------------
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | 
[2024-05-16 08:04:44] 2024-05-16 12:04:19,874 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-05-16 08:04:44] 2024-05-16 12:04:20,318 | WARNING  | process 64350 is no longer using CPU - aborting
[2024-05-16 08:04:44] 2024-05-16 12:04:20,322 | INFO     | aborting job monitoring since job object (job id=6207150938) has expired
[2024-05-16 08:04:44] 2024-05-16 12:04:20,394 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,395 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,395 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,395 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,395 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,396 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 08:04:44] 2024-05-16 12:04:20,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,396 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 08:04:44] 2024-05-16 12:04:20,396 | INFO     | job 6207150938 has completed (purged errors)
[2024-05-16 08:04:44] 2024-05-16 12:04:20,396 | INFO     | overall cleanup function is called
[2024-05-16 08:04:44] 2024-05-16 12:04:21,404 | INFO     | --- collectZombieJob: --- 10, [64350]
[2024-05-16 08:04:44] 2024-05-16 12:04:21,404 | INFO     | zombie collector waiting for pid 64350
[2024-05-16 08:04:44] 2024-05-16 12:04:21,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 08:04:44] 2024-05-16 12:04:22,410 | INFO     | collected zombie processes
[2024-05-16 08:04:44] 2024-05-16 12:04:22,410 | INFO     | will now attempt to kill all subprocesses of pid=64350
[2024-05-16 08:04:44] 2024-05-16 12:04:22,957 | INFO     | process IDs to be killed: [64350] (in reverse order)
[2024-05-16 08:04:44] 2024-05-16 12:04:23,154 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 08:04:44] 2024-05-16 12:04:23,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 08:04:44] 2024-05-16 12:04:23,165 | INFO     | did not find any defunct processes belonging to 64350
[2024-05-16 08:04:44] 2024-05-16 12:04:23,176 | INFO     | did not find any defunct processes belonging to 64350
[2024-05-16 08:04:44] 2024-05-16 12:04:23,176 | INFO     | ready for new job
[2024-05-16 08:04:44] 2024-05-16 12:04:23,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 08:04:44] 2024-05-16 12:04:23,178 | INFO     | *************************************
[2024-05-16 08:04:44] 2024-05-16 12:04:23,179 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 08:04:44] 2024-05-16 12:04:23,179 | INFO     | *************************************
[2024-05-16 08:04:44] 2024-05-16 12:04:23,179 | INFO     | 
[2024-05-16 08:04:44] 2024-05-16 12:04:23,183 | INFO     | architecture information:
[2024-05-16 08:04:44] 2024-05-16 12:04:23,183 | INFO     | executing command: cat /etc/os-release
[2024-05-16 08:04:44] 2024-05-16 12:04:23,209 | INFO     | cat /etc/os-release:
[2024-05-16 08:04:44] NAME="CentOS Linux"
[2024-05-16 08:04:44] VERSION="7 (Core)"
[2024-05-16 08:04:44] ID="centos"
[2024-05-16 08:04:44] ID_LIKE="rhel fedora"
[2024-05-16 08:04:44] VERSION_ID="7"
[2024-05-16 08:04:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 08:04:44] ANSI_COLOR="0;31"
[2024-05-16 08:04:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 08:04:44] HOME_URL="https://www.centos.org/"
[2024-05-16 08:04:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 08:04:44] 
[2024-05-16 08:04:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 08:04:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 08:04:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 08:04:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 08:04:44] 
[2024-05-16 08:04:44] 2024-05-16 12:04:23,210 | INFO     | *************************************
[2024-05-16 08:04:44] 2024-05-16 12:04:23,715 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-05-16 08:04:44] 2024-05-16 12:04:23,825 | INFO     | sufficient remaining disk space (102245597184 B)
[2024-05-16 08:04:44] 2024-05-16 12:04:23,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 08:04:44] 2024-05-16 12:04:23,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 08:04:44] 2024-05-16 12:04:23,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 08:04:44] 2024-05-16 12:04:23,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 08:04:44] 2024-05-16 12:04:23,832 | INFO     | aborting loop
[2024-05-16 08:04:44] 2024-05-16 12:04:23,893 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 08:04:44] 2024-05-16 12:04:23,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 08:04:44] 2024-05-16 12:04:23,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 08:04:44] 2024-05-16 12:04:24,534 | INFO     | all payload control threads have been joined
[2024-05-16 08:04:44] 2024-05-16 12:04:24,693 | INFO     | all job control threads have been joined
[2024-05-16 08:04:44] 2024-05-16 12:04:24,700 | INFO     | all data control threads have been joined
[2024-05-16 08:04:44] 2024-05-16 12:04:24,831 | INFO     | [job] retrieve thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:24,838 | INFO     | [job] job monitor thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:24,841 | INFO     | [payload] validate_post thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:24,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 08:04:44] 2024-05-16 12:04:24,984 | INFO     | [data] copytool_in thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:25,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 08:04:44] 2024-05-16 12:04:25,500 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:25,540 | INFO     | [payload] control thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:25,699 | INFO     | [job] control thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:25,706 | INFO     | [data] control thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:25,900 | INFO     | [job] queue monitor thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:25,944 | INFO     | [job] validate thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:25,963 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:26,031 | INFO     | [payload] failed_post thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:26,056 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:27,091 | INFO     | [data] copytool_out thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:27,836 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:34,232 | INFO     | job.realtimelogging is not enabled
[2024-05-16 08:04:44] 2024-05-16 12:04:35,238 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 08:04:44] 2024-05-16 12:04:37,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639868340032)>', '<ExcThread(monitor, started 140639308084992)>']
[2024-05-16 08:04:44] 2024-05-16 12:04:37,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 08:04:44] 2024-05-16 12:04:37,976 | INFO     | [monitor] control thread has ended
[2024-05-16 08:04:44] 2024-05-16 12:04:42,279 | INFO     | all workflow threads have been joined
[2024-05-16 08:04:44] 2024-05-16 12:04:42,279 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 08:04:44] 2024-05-16 12:04:42,280 | INFO     | traces error code: 0
[2024-05-16 08:04:44] 2024-05-16 12:04:42,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 08:04:44] 2024-05-16 12:04:42,395 [wrapper] ==== pilot stdout END ====
[2024-05-16 08:04:44] 2024-05-16 12:04:42,434 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 08:04:44] 2024-05-16 12:04:42,566 [wrapper] pilotpid: 44667
[2024-05-16 08:04:44] 2024-05-16 12:04:42,602 [wrapper] Pilot exit status: 0
[2024-05-16 08:04:44] 2024-05-16 12:04:42,638 [wrapper] pandaids: 6207150938
[2024-05-16 08:04:44] 2024-05-16 12:04:42,894 [wrapper] cleanup: SIGTERM to supervisor_pilot 95037 44668
[2024-05-16 08:04:44] 2024-05-16 12:04:42,909 [wrapper] Test setup, not cleaning
[2024-05-16 08:04:44] 2024-05-16 12:04:42,924 [wrapper] ==== wrapper stdout END ====
[2024-05-16 08:04:44] 2024-05-16 12:04:42,953 [wrapper] ==== wrapper stderr END ====
[2024-05-16 08:04:44] 2024-05-16 12:04:43,050 [wrapper] apfmon messages muted
[2024-05-16 08:04:44]  *** Error codes and diagnostics ***
[2024-05-16 08:04:44]     "exeErrorCode": 0,
[2024-05-16 08:04:44]     "exeErrorDiag": "",
[2024-05-16 08:04:44]     "pilotErrorCode": 0,
[2024-05-16 08:04:44]     "pilotErrorDiag": "",
[2024-05-16 08:04:44]  *** Listing of results directory ***
[2024-05-16 08:04:44] total 818624
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas      5633 May 15 23:11 queuedata.json
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas    467845 May 15 23:11 pilot3.tar.gz
[2024-05-16 08:04:44] -rwx------ 1 boincer umatlas     32251 May 15 23:15 runpilot2-wrapper.sh
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas       100 May 16 04:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 08:04:44] -rwxr-xr-x 1 boincer umatlas      7986 May 16 04:11 run_atlas
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas       105 May 16 04:11 job.xml
[2024-05-16 08:04:44] -rw-r--r-- 2 boincer umatlas 598584993 May 16 04:12 EVNT.38776100._000379.pool.root.1
[2024-05-16 08:04:44] -rw-r--r-- 2 boincer umatlas     17537 May 16 04:12 start_atlas.sh
[2024-05-16 08:04:44] drwxrwx--x 2 boincer umatlas      4096 May 16 04:12 shared
[2024-05-16 08:04:44] -rw-r--r-- 2 boincer umatlas    480006 May 16 04:12 input.tar.gz
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas         0 May 16 04:12 boinc_lockfile
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas      2640 May 16 04:12 pandaJob.out
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas       467 May 16 04:12 setup.sh.local
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas   1010273 May 16 04:13 agis_schedconf.cvmfs.json
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas   1324701 May 16 04:13 cric_ddmendpoints.json
[2024-05-16 08:04:44] drwx------ 4 boincer umatlas      4096 May 16 04:13 pilot3
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas 232815074 May 16 08:02 HITS.38776104._009482.pool.root.1
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas       531 May 16 08:02 boinc_task_state.xml
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas      1091 May 16 08:03 memory_monitor_summary.json
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas         0 May 16 08:03 agis_ddmendpoints.agis.ALL.json
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas    412478 May 16 08:03 log.38776104._009482.job.log.tgz.1
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas      6388 May 16 08:03 init_data.xml
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas        95 May 16 08:04 pilot_heartbeat.json
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas      7766 May 16 08:04 heartbeat.json
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas      4284 May 16 08:04 pilotlog.txt
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas        28 May 16 08:04 wrapper_checkpoint.txt
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas      8192 May 16 08:04 boinc_mmap_file
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas   1262696 May 16 08:04 log.38776104._009482.job.log.1
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas       357 May 16 08:04 output.list
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas       620 May 16 08:04 runtime_log
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas   1689600 May 16 08:04 result.tar.gz
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas     11400 May 16 08:04 runtime_log.err
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas       650 May 16 08:04 LvvKDm8lgR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzAPKDmUo3Stm.diag
[2024-05-16 08:04:44] -rw-r--r-- 1 boincer umatlas     21729 May 16 08:04 stderr.txt
[2024-05-16 08:04:44] HITS file was successfully produced:
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas 232815074 May 16 08:02 shared/HITS.pool.root.1
[2024-05-16 08:04:44]  *** Contents of shared directory: ***
[2024-05-16 08:04:44] total 814068
[2024-05-16 08:04:44] -rw-r--r-- 2 boincer umatlas 598584993 May 16 04:12 ATLAS.root_0
[2024-05-16 08:04:44] -rw-r--r-- 2 boincer umatlas     17537 May 16 04:12 start_atlas.sh
[2024-05-16 08:04:44] -rw-r--r-- 2 boincer umatlas    480006 May 16 04:12 input.tar.gz
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas 232815074 May 16 08:02 HITS.pool.root.1
[2024-05-16 08:04:44] -rw------- 1 boincer umatlas   1689600 May 16 08:04 result.tar.gz
08:04:45 (17994): run_atlas exited; CPU time 36427.582481
08:04:45 (17994): called boinc_finish(0)

</stderr_txt>
]]>

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