Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:52:11 (1005889): wrapper (7.7.26015): starting
01:52:11 (1005889): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 01:52:11] Arguments: --nthreads 4
[2024-05-19 01:52:11] Threads: 4
[2024-05-19 01:52:11] Checking for CVMFS
[2024-05-19 01:52:11] No cvmfs_config command found, will try listing directly
[2024-05-19 01:52:11] CVMFS is ok
[2024-05-19 01:52:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 01:52:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 01:52:11] Further information can be found at the LHC@home message board.
[2024-05-19 01:52:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 01:52:11] Checking for apptainer binary...
[2024-05-19 01:52:11] which: no apptainer in ((null))
[2024-05-19 01:52:11] apptainer is not installed, using version from CVMFS
[2024-05-19 01:52:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 01:52:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-19 01:52:11] apptainer works
[2024-05-19 01:52:11] Set ATHENA_PROC_NUMBER=4
[2024-05-19 01:52:11] Set ATHENA_CORE_NUMBER=4
[2024-05-19 01:52:11] Starting ATLAS job with PandaID=6207134484
[2024-05-19 01:52:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 03:51:54]  *** The last 200 lines of the pilot log: ***
[2024-05-19 03:51:54] 2024-05-19 01:51:33,487 | INFO     | current chi2=0.005648380787342503 (change=85.57278194199681 %)
[2024-05-19 03:51:54] 2024-05-19 01:51:33,487 | INFO     | model: linear, x: [1716077586.0, 1716077647.0, 1716077708.0, 1716077769.0, 1716077830.0, 1716077891.0, 1716077952.0, 1716078013.0, 1716078074.0, 1716078135.0, 1716
[2024-05-19 03:51:54] 2024-05-19 01:51:33,487 | INFO     | sum of square deviations: 282974608.0
[2024-05-19 03:51:54] 2024-05-19 01:51:33,487 | INFO     | sum of deviations: -45460493.99999995
[2024-05-19 03:51:54] 2024-05-19 01:51:33,487 | INFO     | mean x: 1716080514.0
[2024-05-19 03:51:54] 2024-05-19 01:51:33,487 | INFO     | mean y: 2355603.587628866
[2024-05-19 03:51:54] 2024-05-19 01:51:33,487 | INFO     | -- intersect: 278047717.66669077
[2024-05-19 03:51:54] 2024-05-19 01:51:33,487 | INFO     | intersect: 278047717.66669077
[2024-05-19 03:51:54] 2024-05-19 01:51:33,487 | INFO     | chi2: 0.00335899357240985
[2024-05-19 03:51:54] 2024-05-19 01:51:33,487 | INFO     | current chi2=0.00335899357240985 (change=40.5317435407853 %)
[2024-05-19 03:51:54] 2024-05-19 01:51:33,487 | INFO     | model: linear, x: [1716077891.0, 1716077952.0, 1716078013.0, 1716078074.0, 1716078135.0, 1716078196.0, 1716078257.0, 1716078318.0, 1716078379.0, 1716078440.0, 1716
[2024-05-19 03:51:54] 2024-05-19 01:51:33,488 | INFO     | sum of square deviations: 241429643.0
[2024-05-19 03:51:54] 2024-05-19 01:51:33,488 | INFO     | sum of deviations: 453386648.0
[2024-05-19 03:51:54] 2024-05-19 01:51:33,488 | INFO     | mean x: 1716080666.5
[2024-05-19 03:51:54] 2024-05-19 01:51:33,488 | INFO     | mean y: 2353834.7391304346
[2024-05-19 03:51:54] 2024-05-19 01:51:33,488 | INFO     | -- intersect: -3220316138.2353187
[2024-05-19 03:51:54] 2024-05-19 01:51:33,488 | INFO     | intersect: -3220316138.2353187
[2024-05-19 03:51:54] 2024-05-19 01:51:33,488 | INFO     | chi2: 0.00018157790087398165
[2024-05-19 03:51:54] 2024-05-19 01:51:33,488 | INFO     | current chi2=0.00018157790087398165 (change=94.59427662007367 %)
[2024-05-19 03:51:54] 2024-05-19 01:51:33,488 | INFO     | model: linear, x: [1716078196.0, 1716078257.0, 1716078318.0, 1716078379.0, 1716078440.0, 1716078501.0, 1716078562.0, 1716078623.0, 1716078684.0, 1716078745.0, 1716
[2024-05-19 03:51:54] 2024-05-19 01:51:33,488 | INFO     | sum of square deviations: 204163828.0
[2024-05-19 03:51:54] 2024-05-19 01:51:33,488 | INFO     | sum of deviations: 235341355.00000006
[2024-05-19 03:51:54] 2024-05-19 01:51:33,488 | INFO     | mean x: 1716080819.0
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | mean y: 2354720.8620689656
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | -- intersect: -1975786016.3549562
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | intersect: -1975786016.3549562
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | chi2: 3.9837261247483734e-05
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | current chi2=3.9837261247483734e-05 (change=78.06051228936086 %)
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | model: linear, x: [1716078501.0, 1716078562.0, 1716078623.0, 1716078684.0, 1716078745.0, 1716078806.0, 1716078867.0, 1716078928.0, 1716078989.0, 1716079050.0, 1716
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | sum of square deviations: 170944600.5
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | sum of deviations: 125530741.0
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | mean x: 1716080971.5
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | mean y: 2355225.43902439
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | -- intersect: -1257824478.033943
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | intersect: -1257824478.033943
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | chi2: 6.5367362487048955e-06
[2024-05-19 03:51:54] 2024-05-19 01:51:33,489 | INFO     | current chi2=6.5367362487048955e-06 (change=83.5914015070055 %)
[2024-05-19 03:51:54] 2024-05-19 01:51:33,490 | INFO     | model: linear, x: [1716078806.0, 1716078867.0, 1716078928.0, 1716078989.0, 1716079050.0, 1716079111.0, 1716079172.0, 1716079233.0, 1716079294.0, 1716079355.0, 1716
[2024-05-19 03:51:54] 2024-05-19 01:51:33,490 | INFO     | sum of square deviations: 141539398.0
[2024-05-19 03:51:54] 2024-05-19 01:51:33,490 | INFO     | sum of deviations: 99421216.00000004
[2024-05-19 03:51:54] 2024-05-19 01:51:33,490 | INFO     | mean x: 1716081124.0
[2024-05-19 03:51:54] 2024-05-19 01:51:33,490 | INFO     | mean y: 2355357.987012987
[2024-05-19 03:51:54] 2024-05-19 01:51:33,490 | INFO     | -- intersect: -1203067828.161672
[2024-05-19 03:51:54] 2024-05-19 01:51:33,490 | INFO     | intersect: -1203067828.161672
[2024-05-19 03:51:54] 2024-05-19 01:51:33,490 | INFO     | chi2: 4.052698850649411e-06
[2024-05-19 03:51:54] 2024-05-19 01:51:33,490 | INFO     | current chi2=4.052698850649411e-06 (change=38.00118749701183 %)
[2024-05-19 03:51:54] 2024-05-19 01:51:33,490 | INFO     | left removable region not found
[2024-05-19 03:51:54] 2024-05-19 01:51:33,490 | INFO     | model: linear, x: [1716076366.0, 1716076427.0, 1716076488.0, 1716076549.0, 1716076610.0, 1716076671.0, 1716076732.0, 1716076793.0, 1716076854.0, 1716076915.0, 1716
[2024-05-19 03:51:54] 2024-05-19 01:51:33,490 | INFO     | sum of square deviations: 424045160.0
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | sum of deviations: 44197514315.0
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | mean x: 1716079721.0
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | mean y: 2227311.4774774774
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | -- intersect: -178861877715.87082
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | intersect: -178861877715.87082
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | chi2: 3.8593501619679635
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | -- intersect: -178861877715.87082
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | current memory leak: 104.23 B/s (using 111 data points, chi2=3.86)
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | ..............................
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | . Timing measurements:
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | . get job = 0 s
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | . initial setup = 1 s
[2024-05-19 03:51:54] 2024-05-19 01:51:33,491 | INFO     | . payload setup = 5 s
[2024-05-19 03:51:54] 2024-05-19 01:51:33,492 | INFO     | . stage-in = 0 s
[2024-05-19 03:51:54] 2024-05-19 01:51:33,492 | INFO     | . payload execution = 7123 s
[2024-05-19 03:51:54] 2024-05-19 01:51:33,492 | INFO     | . stage-out = 0 s
[2024-05-19 03:51:54] 2024-05-19 01:51:33,492 | INFO     | . log creation = 0 s
[2024-05-19 03:51:54] 2024-05-19 01:51:33,492 | INFO     | ..............................
[2024-05-19 03:51:54] 2024-05-19 01:51:33,699 | WARNING  | process 1017969 is no longer using CPU - aborting
[2024-05-19 03:51:54] 2024-05-19 01:51:33,700 | INFO     | aborting job monitoring since job object (job id=6207134484) has expired
[2024-05-19 03:51:54] 2024-05-19 01:51:34,016 | INFO     | 
[2024-05-19 03:51:54] 2024-05-19 01:51:34,016 | INFO     | job summary report
[2024-05-19 03:51:54] 2024-05-19 01:51:34,016 | INFO     | --------------------------------------------------
[2024-05-19 03:51:54] 2024-05-19 01:51:34,016 | INFO     | PanDA job id: 6207134484
[2024-05-19 03:51:54] 2024-05-19 01:51:34,016 | INFO     | task id: 38776125
[2024-05-19 03:51:54] 2024-05-19 01:51:34,016 | INFO     | errors: (none)
[2024-05-19 03:51:54] 2024-05-19 01:51:34,016 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 03:51:54] 2024-05-19 01:51:34,016 | INFO     | pilot state: finished 
[2024-05-19 03:51:54] 2024-05-19 01:51:34,016 | INFO     | transexitcode: 0
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | exeerrorcode: 0
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | exeerrordiag: 
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | exitcode: 0
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | exitmsg: OK
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | cpuconsumptiontime: 25971 s
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | nevents: 400
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | neventsw: 0
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | pid: 1017969
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | pgrp: 1017969
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | corecount: 4
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | event service: False
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | sizes: {0: 2392140, 4: 2392460, 11: 2392488, 7132: 2419760, 7133: 2428799, 7134: 2428799, 7138: 2429097}
[2024-05-19 03:51:54] 2024-05-19 01:51:34,017 | INFO     | --------------------------------------------------
[2024-05-19 03:51:54] 2024-05-19 01:51:34,018 | INFO     | 
[2024-05-19 03:51:54] 2024-05-19 01:51:34,018 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2024-05-19 03:51:54] 2024-05-19 01:51:34,038 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,038 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,038 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,038 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | job 6207134484 has completed (purged errors)
[2024-05-19 03:51:54] 2024-05-19 01:51:34,039 | INFO     | overall cleanup function is called
[2024-05-19 03:51:54] 2024-05-19 01:51:35,046 | INFO     | --- collectZombieJob: --- 10, [1017969]
[2024-05-19 03:51:54] 2024-05-19 01:51:35,046 | INFO     | zombie collector waiting for pid 1017969
[2024-05-19 03:51:54] 2024-05-19 01:51:35,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 03:51:54] 2024-05-19 01:51:36,051 | INFO     | collected zombie processes
[2024-05-19 03:51:54] 2024-05-19 01:51:36,051 | INFO     | will now attempt to kill all subprocesses of pid=1017969
[2024-05-19 03:51:54] 2024-05-19 01:51:36,222 | INFO     | process IDs to be killed: [1017969] (in reverse order)
[2024-05-19 03:51:54] 2024-05-19 01:51:36,333 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 03:51:54] 2024-05-19 01:51:36,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 03:51:54] 2024-05-19 01:51:36,354 | INFO     | did not find any defunct processes belonging to 1017969
[2024-05-19 03:51:54] 2024-05-19 01:51:36,371 | INFO     | did not find any defunct processes belonging to 1017969
[2024-05-19 03:51:54] 2024-05-19 01:51:36,371 | INFO     | ready for new job
[2024-05-19 03:51:54] 2024-05-19 01:51:36,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 03:51:54] 2024-05-19 01:51:36,373 | INFO     | *************************************
[2024-05-19 03:51:54] 2024-05-19 01:51:36,373 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 03:51:54] 2024-05-19 01:51:36,374 | INFO     | *************************************
[2024-05-19 03:51:54] 2024-05-19 01:51:36,374 | INFO     | 
[2024-05-19 03:51:54] 2024-05-19 01:51:36,383 | INFO     | architecture information:
[2024-05-19 03:51:54] 2024-05-19 01:51:36,383 | INFO     | executing command: cat /etc/os-release
[2024-05-19 03:51:54] 2024-05-19 01:51:36,397 | INFO     | cat /etc/os-release:
[2024-05-19 03:51:54] NAME="CentOS Linux"
[2024-05-19 03:51:54] VERSION="7 (Core)"
[2024-05-19 03:51:54] ID="centos"
[2024-05-19 03:51:54] ID_LIKE="rhel fedora"
[2024-05-19 03:51:54] VERSION_ID="7"
[2024-05-19 03:51:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 03:51:54] ANSI_COLOR="0;31"
[2024-05-19 03:51:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 03:51:54] HOME_URL="https://www.centos.org/"
[2024-05-19 03:51:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 03:51:54] 
[2024-05-19 03:51:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 03:51:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 03:51:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 03:51:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 03:51:54] 
[2024-05-19 03:51:54] 2024-05-19 01:51:36,397 | INFO     | *************************************
[2024-05-19 03:51:54] 2024-05-19 01:51:36,900 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2024-05-19 03:51:54] 2024-05-19 01:51:36,923 | INFO     | sufficient remaining disk space (2963134218240 B)
[2024-05-19 03:51:54] 2024-05-19 01:51:36,924 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 03:51:54] 2024-05-19 01:51:36,924 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 03:51:54] 2024-05-19 01:51:37,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 03:51:54] 2024-05-19 01:51:37,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 03:51:54] 2024-05-19 01:51:37,208 | INFO     | aborting loop
[2024-05-19 03:51:54] 2024-05-19 01:51:37,674 | INFO     | all payload control threads have been joined
[2024-05-19 03:51:54] 2024-05-19 01:51:37,855 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 03:51:54] 2024-05-19 01:51:37,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 03:51:54] 2024-05-19 01:51:37,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 03:51:54] 2024-05-19 01:51:37,864 | INFO     | all job control threads have been joined
[2024-05-19 03:51:54] 2024-05-19 01:51:37,930 | INFO     | [job] retrieve thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:37,976 | INFO     | all data control threads have been joined
[2024-05-19 03:51:54] 2024-05-19 01:51:38,053 | INFO     | [job] validate thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:38,195 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:38,213 | INFO     | [job] job monitor thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:38,425 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:38,430 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:38,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 03:51:54] 2024-05-19 01:51:38,624 | INFO     | [payload] failed_post thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:38,680 | INFO     | [payload] control thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:38,869 | INFO     | [job] control thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:38,981 | INFO     | [data] control thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:39,137 | INFO     | [payload] validate_post thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:39,138 | INFO     | [data] copytool_out thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:39,391 | INFO     | [data] copytool_in thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:39,561 | INFO     | [job] queue monitor thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:40,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 03:51:54] 2024-05-19 01:51:44,010 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:46,991 | INFO     | job.realtimelogging is not enabled
[2024-05-19 03:51:54] 2024-05-19 01:51:47,997 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 03:51:54] 2024-05-19 01:51:48,325 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47990211621952)>', '<ExcThread(monitor, started 47990380771072)>']
[2024-05-19 03:51:54] 2024-05-19 01:51:48,911 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 03:51:54] 2024-05-19 01:51:48,911 | INFO     | [monitor] control thread has ended
[2024-05-19 03:51:54] 2024-05-19 01:51:53,335 | INFO     | all workflow threads have been joined
[2024-05-19 03:51:54] 2024-05-19 01:51:53,335 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 03:51:54] 2024-05-19 01:51:53,336 | INFO     | traces error code: 0
[2024-05-19 03:51:54] 2024-05-19 01:51:53,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 03:51:54] 2024-05-19 01:51:53,414 [wrapper] ==== pilot stdout END ====
[2024-05-19 03:51:54] 2024-05-19 01:51:53,417 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 03:51:54] 2024-05-19 01:51:53,418 [wrapper] pilotpid: 1010453
[2024-05-19 03:51:54] 2024-05-19 01:51:53,420 [wrapper] Pilot exit status: 0
[2024-05-19 03:51:54] 2024-05-19 01:51:53,429 [wrapper] pandaids: 6207134484
[2024-05-19 03:51:54] 2024-05-19 01:51:53,510 [wrapper] cleanup: SIGTERM to supervisor_pilot 1354607 1010454
[2024-05-19 03:51:54] 2024-05-19 01:51:53,512 [wrapper] Test setup, not cleaning
[2024-05-19 03:51:54] 2024-05-19 01:51:53,514 [wrapper] ==== wrapper stdout END ====
[2024-05-19 03:51:54] 2024-05-19 01:51:53,517 [wrapper] ==== wrapper stderr END ====
[2024-05-19 03:51:54] 2024-05-19 01:51:53,521 [wrapper] apfmon messages muted
[2024-05-19 03:51:54]  *** Error codes and diagnostics ***
[2024-05-19 03:51:54]     "exeErrorCode": 0,
[2024-05-19 03:51:54]     "exeErrorDiag": "",
[2024-05-19 03:51:54]     "pilotErrorCode": 0,
[2024-05-19 03:51:54]     "pilotErrorDiag": "",
[2024-05-19 03:51:54]  *** Listing of results directory ***
[2024-05-19 03:51:54] total 826828
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc    467845 May 16 04:45 pilot3.tar.gz
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc      5633 May 16 04:53 queuedata.json
[2024-05-19 03:51:54] -rwx------ 1 boinc boinc     32251 May 16 04:53 runpilot2-wrapper.sh
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc       100 May 19 01:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 03:51:54] -rwxr-xr-x 1 boinc boinc      7986 May 19 01:52 run_atlas
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc       105 May 19 01:52 job.xml
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc      6646 May 19 01:52 init_data.xml
[2024-05-19 03:51:54] -rw-r--r-- 2 boinc boinc 598644960 May 19 01:52 EVNT.38776119._000290.pool.root.1
[2024-05-19 03:51:54] -rw-r--r-- 2 boinc boinc     17537 May 19 01:52 start_atlas.sh
[2024-05-19 03:51:54] drwxrwx--x 2 boinc boinc      4096 May 19 01:52 shared
[2024-05-19 03:51:54] -rw-r--r-- 2 boinc boinc    480016 May 19 01:52 input.tar.gz
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc         0 May 19 01:52 boinc_lockfile
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc      2632 May 19 01:52 pandaJob.out
[2024-05-19 03:51:54] -rw------- 1 boinc boinc       424 May 19 01:52 setup.sh.local
[2024-05-19 03:51:54] -rw------- 1 boinc boinc   1013712 May 19 01:52 agis_schedconf.cvmfs.json
[2024-05-19 03:51:54] -rw------- 1 boinc boinc         0 May 19 01:52 agis_ddmendpoints.agis.ALL.json
[2024-05-19 03:51:54] -rw------- 1 boinc boinc   1324701 May 19 01:52 cric_ddmendpoints.json
[2024-05-19 03:51:54] drwx------ 4 boinc boinc      4096 May 19 01:52 pilot3
[2024-05-19 03:51:54] -rw------- 1 boinc boinc        95 May 19 03:50 pilot_heartbeat.json
[2024-05-19 03:51:54] -rw------- 1 boinc boinc 242502358 May 19 03:51 HITS.38776125._012236.pool.root.1
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc       530 May 19 03:51 boinc_task_state.xml
[2024-05-19 03:51:54] -rw------- 1 boinc boinc      1042 May 19 03:51 memory_monitor_summary.json
[2024-05-19 03:51:54] -rw------- 1 boinc boinc    255381 May 19 03:51 log.38776125._012236.job.log.tgz.1
[2024-05-19 03:51:54] -rw------- 1 boinc boinc      7720 May 19 03:51 heartbeat.json
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc      8192 May 19 03:51 boinc_mmap_file
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc        27 May 19 03:51 wrapper_checkpoint.txt
[2024-05-19 03:51:54] -rw------- 1 boinc boinc      4295 May 19 03:51 pilotlog.txt
[2024-05-19 03:51:54] -rw------- 1 boinc boinc    742665 May 19 03:51 log.38776125._012236.job.log.1
[2024-05-19 03:51:54] -rw------- 1 boinc boinc       357 May 19 03:51 output.list
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc       620 May 19 03:51 runtime_log
[2024-05-19 03:51:54] -rw------- 1 boinc boinc   1013760 May 19 03:51 result.tar.gz
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc     11428 May 19 03:51 runtime_log.err
[2024-05-19 03:51:54] -rw------- 1 boinc boinc       656 May 19 03:51 LFyLDmKQgR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmv4JKDmmL8znm.diag
[2024-05-19 03:51:54] -rw-r--r-- 1 boinc boinc     21420 May 19 03:51 stderr.txt
[2024-05-19 03:51:54] HITS file was successfully produced:
[2024-05-19 03:51:54] -rw------- 1 boinc boinc 242502358 May 19 03:51 shared/HITS.pool.root.1
[2024-05-19 03:51:54]  *** Contents of shared directory: ***
[2024-05-19 03:51:54] total 822928
[2024-05-19 03:51:54] -rw-r--r-- 2 boinc boinc 598644960 May 19 01:52 ATLAS.root_0
[2024-05-19 03:51:54] -rw-r--r-- 2 boinc boinc     17537 May 19 01:52 start_atlas.sh
[2024-05-19 03:51:54] -rw-r--r-- 2 boinc boinc    480016 May 19 01:52 input.tar.gz
[2024-05-19 03:51:54] -rw------- 1 boinc boinc 242502358 May 19 03:51 HITS.pool.root.1
[2024-05-19 03:51:54] -rw------- 1 boinc boinc   1013760 May 19 03:51 result.tar.gz
03:51:55 (1005889): run_atlas exited; CPU time 25508.979215
03:51:55 (1005889): called boinc_finish(0)

</stderr_txt>
]]>

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