Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:18:12 (3838189): wrapper (7.7.26015): starting
07:18:12 (3838189): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 07:18:12] Arguments: --nthreads 4
[2024-05-18 07:18:12] Threads: 4
[2024-05-18 07:18:12] Checking for CVMFS
[2024-05-18 07:18:12] No cvmfs_config command found, will try listing directly
[2024-05-18 07:18:12] CVMFS is ok
[2024-05-18 07:18:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 07:18:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 07:18:12] Further information can be found at the LHC@home message board.
[2024-05-18 07:18:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 07:18:12] Checking for apptainer binary...
[2024-05-18 07:18:12] which: no apptainer in ((null))
[2024-05-18 07:18:12] apptainer is not installed, using version from CVMFS
[2024-05-18 07:18:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 07:18:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-05-18 07:18:13] apptainer works
[2024-05-18 07:18:13] Set ATHENA_PROC_NUMBER=4
[2024-05-18 07:18:13] Set ATHENA_CORE_NUMBER=4
[2024-05-18 07:18:13] Starting ATLAS job with PandaID=6207116584
[2024-05-18 07:18:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 13:13:16]  *** The last 200 lines of the pilot log: ***
[2024-05-18 13:13:16] 2024-05-18 11:12:59,476 | INFO     | fitting pss+swap vs Time
[2024-05-18 13:13:16] 2024-05-18 11:12:59,477 | INFO     | model: linear, x: [1716009528.0, 1716009589.0, 1716009650.0, 1716009711.0, 1716009772.0, 1716009833.0, 1716009894.0, 1716009955.0, 1716010016.0, 1716010077.0, 1716
[2024-05-18 13:13:16] 2024-05-18 11:12:59,477 | INFO     | sum of square deviations: 13181084350.0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,481 | INFO     | sum of deviations: 140169682284.0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,481 | INFO     | mean x: 1716020142.0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,481 | INFO     | mean y: 2309606.4269340974
[2024-05-18 13:13:16] 2024-05-18 11:12:59,481 | INFO     | -- intersect: -18246113035.454163
[2024-05-18 13:13:16] 2024-05-18 11:12:59,481 | INFO     | intersect: -18246113035.454163
[2024-05-18 13:13:16] 2024-05-18 11:12:59,482 | INFO     | chi2: 4.596672758951909
[2024-05-18 13:13:16] 2024-05-18 11:12:59,482 | INFO     | model: linear, x: [1716009528.0, 1716009589.0, 1716009650.0, 1716009711.0, 1716009772.0, 1716009833.0, 1716009894.0, 1716009955.0, 1716010016.0, 1716010077.0, 1716
[2024-05-18 13:13:16] 2024-05-18 11:12:59,482 | INFO     | sum of square deviations: 12622636670.0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,486 | INFO     | sum of deviations: 159873627875.5
[2024-05-18 13:13:16] 2024-05-18 11:12:59,486 | INFO     | mean x: 1716019989.5
[2024-05-18 13:13:16] 2024-05-18 11:12:59,486 | INFO     | mean y: 2314916.770348837
[2024-05-18 13:13:16] 2024-05-18 11:12:59,486 | INFO     | -- intersect: -21732156921.453163
[2024-05-18 13:13:16] 2024-05-18 11:12:59,486 | INFO     | intersect: -21732156921.453163
[2024-05-18 13:13:16] 2024-05-18 11:12:59,487 | INFO     | chi2: 3.81297160766903
[2024-05-18 13:13:16] 2024-05-18 11:12:59,487 | INFO     | current chi2=3.81297160766903 (change=17.049313544381427 %)
[2024-05-18 13:13:16] 2024-05-18 11:12:59,487 | INFO     | right removable region: 343
[2024-05-18 13:13:16] 2024-05-18 11:12:59,487 | INFO     | model: linear, x: [1716009833.0, 1716009894.0, 1716009955.0, 1716010016.0, 1716010077.0, 1716010138.0, 1716010199.0, 1716010260.0, 1716010321.0, 1716010382.0, 1716
[2024-05-18 13:13:16] 2024-05-18 11:12:59,487 | INFO     | sum of square deviations: 12622636670.0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,491 | INFO     | sum of deviations: 59749313492.49997
[2024-05-18 13:13:16] 2024-05-18 11:12:59,491 | INFO     | mean x: 1716020294.5
[2024-05-18 13:13:16] 2024-05-18 11:12:59,491 | INFO     | mean y: 2331529.444767442
[2024-05-18 13:13:16] 2024-05-18 11:12:59,491 | INFO     | -- intersect: -8120459074.142544
[2024-05-18 13:13:16] 2024-05-18 11:12:59,491 | INFO     | intersect: -8120459074.142544
[2024-05-18 13:13:16] 2024-05-18 11:12:59,491 | INFO     | chi2: 2.2261162421230725
[2024-05-18 13:13:16] 2024-05-18 11:12:59,492 | INFO     | current chi2=2.2261162421230725 (change=51.571139411919965 %)
[2024-05-18 13:13:16] 2024-05-18 11:12:59,492 | INFO     | model: linear, x: [1716010138.0, 1716010199.0, 1716010260.0, 1716010321.0, 1716010382.0, 1716010443.0, 1716010504.0, 1716010565.0, 1716010626.0, 1716010687.0, 1716
[2024-05-18 13:13:16] 2024-05-18 11:12:59,492 | INFO     | sum of square deviations: 12080189290.0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,495 | INFO     | sum of deviations: -4201060850.000004
[2024-05-18 13:13:16] 2024-05-18 11:12:59,495 | INFO     | mean x: 1716020447.0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,496 | INFO     | mean y: 2349508.1946902657
[2024-05-18 13:13:16] 2024-05-18 11:12:59,496 | INFO     | -- intersect: 599120481.2835735
[2024-05-18 13:13:16] 2024-05-18 11:12:59,496 | INFO     | intersect: 599120481.2835735
[2024-05-18 13:13:16] 2024-05-18 11:12:59,496 | INFO     | chi2: 0.8567170656564123
[2024-05-18 13:13:16] 2024-05-18 11:12:59,496 | INFO     | current chi2=0.8567170656564123 (change=61.51516935884034 %)
[2024-05-18 13:13:16] 2024-05-18 11:12:59,497 | INFO     | model: linear, x: [1716010443.0, 1716010504.0, 1716010565.0, 1716010626.0, 1716010687.0, 1716010748.0, 1716010809.0, 1716010870.0, 1716010931.0, 1716010992.0, 1716
[2024-05-18 13:13:16] 2024-05-18 11:12:59,497 | INFO     | sum of square deviations: 11553509647.5
[2024-05-18 13:13:16] 2024-05-18 11:12:59,500 | INFO     | sum of deviations: -13408254602.5
[2024-05-18 13:13:16] 2024-05-18 11:12:59,500 | INFO     | mean x: 1716020599.5
[2024-05-18 13:13:16] 2024-05-18 11:12:59,500 | INFO     | mean y: 2352166.7814371255
[2024-05-18 13:13:16] 2024-05-18 11:12:59,500 | INFO     | -- intersect: 1993854472.4214761
[2024-05-18 13:13:16] 2024-05-18 11:12:59,500 | INFO     | intersect: 1993854472.4214761
[2024-05-18 13:13:16] 2024-05-18 11:12:59,501 | INFO     | chi2: 0.8220659476390381
[2024-05-18 13:13:16] 2024-05-18 11:12:59,501 | INFO     | current chi2=0.8220659476390381 (change=4.044639637337524 %)
[2024-05-18 13:13:16] 2024-05-18 11:12:59,501 | INFO     | left removable region: 30
[2024-05-18 13:13:16] 2024-05-18 11:12:59,502 | INFO     | model: linear, x: [1716011358.0, 1716011419.0, 1716011480.0, 1716011541.0, 1716011602.0, 1716011663.0, 1716011724.0, 1716011785.0, 1716011846.0, 1716011907.0, 1716
[2024-05-18 13:13:16] 2024-05-18 11:12:59,502 | INFO     | sum of square deviations: 9508390372.0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,505 | INFO     | sum of deviations: 9498186169.999998
[2024-05-18 13:13:16] 2024-05-18 11:12:59,505 | INFO     | mean x: 1716020874.0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,505 | INFO     | mean y: 2357683.712460064
[2024-05-18 13:13:16] 2024-05-18 11:12:59,505 | INFO     | -- intersect: -1711821593.240149
[2024-05-18 13:13:16] 2024-05-18 11:12:59,505 | INFO     | intersect: -1711821593.240149
[2024-05-18 13:13:16] 2024-05-18 11:12:59,505 | INFO     | chi2: 0.00924477668993884
[2024-05-18 13:13:16] 2024-05-18 11:12:59,506 | INFO     | -- intersect: -1711821593.240149
[2024-05-18 13:13:16] 2024-05-18 11:12:59,506 | INFO     | current memory leak: 1.00 B/s (using 313 data points, chi2=0.01)
[2024-05-18 13:13:16] 2024-05-18 11:12:59,506 | INFO     | ..............................
[2024-05-18 13:13:16] 2024-05-18 11:12:59,506 | INFO     | . Timing measurements:
[2024-05-18 13:13:16] 2024-05-18 11:12:59,506 | INFO     | . get job = 0 s
[2024-05-18 13:13:16] 2024-05-18 11:12:59,507 | INFO     | . initial setup = 1 s
[2024-05-18 13:13:16] 2024-05-18 11:12:59,507 | INFO     | . payload setup = 5 s
[2024-05-18 13:13:16] 2024-05-18 11:12:59,507 | INFO     | . stage-in = 0 s
[2024-05-18 13:13:16] 2024-05-18 11:12:59,507 | INFO     | . payload execution = 21245 s
[2024-05-18 13:13:16] 2024-05-18 11:12:59,507 | INFO     | . stage-out = 0 s
[2024-05-18 13:13:16] 2024-05-18 11:12:59,507 | INFO     | . log creation = 0 s
[2024-05-18 13:13:16] 2024-05-18 11:12:59,507 | INFO     | ..............................
[2024-05-18 13:13:16] 2024-05-18 11:12:59,651 | WARNING  | process 3850551 is no longer using CPU - aborting
[2024-05-18 13:13:16] 2024-05-18 11:12:59,652 | INFO     | aborting job monitoring since job object (job id=6207116584) has expired
[2024-05-18 13:13:16] 2024-05-18 11:12:59,892 | INFO     | 
[2024-05-18 13:13:16] 2024-05-18 11:12:59,893 | INFO     | job summary report
[2024-05-18 13:13:16] 2024-05-18 11:12:59,893 | INFO     | --------------------------------------------------
[2024-05-18 13:13:16] 2024-05-18 11:12:59,893 | INFO     | PanDA job id: 6207116584
[2024-05-18 13:13:16] 2024-05-18 11:12:59,893 | INFO     | task id: 38921013
[2024-05-18 13:13:16] 2024-05-18 11:12:59,893 | INFO     | errors: (none)
[2024-05-18 13:13:16] 2024-05-18 11:12:59,893 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 13:13:16] 2024-05-18 11:12:59,894 | INFO     | pilot state: finished 
[2024-05-18 13:13:16] 2024-05-18 11:12:59,894 | INFO     | transexitcode: 0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,894 | INFO     | exeerrorcode: 0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,894 | INFO     | exeerrordiag: 
[2024-05-18 13:13:16] 2024-05-18 11:12:59,894 | INFO     | exitcode: 0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,894 | INFO     | exitmsg: OK
[2024-05-18 13:13:16] 2024-05-18 11:12:59,894 | INFO     | cpuconsumptiontime: 81796 s
[2024-05-18 13:13:16] 2024-05-18 11:12:59,894 | INFO     | nevents: 400
[2024-05-18 13:13:16] 2024-05-18 11:12:59,894 | INFO     | neventsw: 0
[2024-05-18 13:13:16] 2024-05-18 11:12:59,895 | INFO     | pid: 3850551
[2024-05-18 13:13:16] 2024-05-18 11:12:59,895 | INFO     | pgrp: 3850551
[2024-05-18 13:13:16] 2024-05-18 11:12:59,895 | INFO     | corecount: 4
[2024-05-18 13:13:16] 2024-05-18 11:12:59,895 | INFO     | event service: False
[2024-05-18 13:13:16] 2024-05-18 11:12:59,895 | INFO     | sizes: {0: 2392220, 5: 2392426, 11: 2392482, 21254: 2426522, 21255: 2426521, 21257: 2435745, 21262: 2435859}
[2024-05-18 13:13:16] 2024-05-18 11:12:59,895 | INFO     | --------------------------------------------------
[2024-05-18 13:13:16] 2024-05-18 11:12:59,895 | INFO     | 
[2024-05-18 13:13:16] 2024-05-18 11:12:59,895 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/1
[2024-05-18 13:13:16] 2024-05-18 11:12:59,918 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 13:13:16] 2024-05-18 11:12:59,919 | INFO     | job 6207116584 has completed (purged errors)
[2024-05-18 13:13:16] 2024-05-18 11:12:59,920 | INFO     | overall cleanup function is called
[2024-05-18 13:13:16] 2024-05-18 11:13:00,926 | INFO     | --- collectZombieJob: --- 10, [3850551]
[2024-05-18 13:13:16] 2024-05-18 11:13:00,927 | INFO     | zombie collector waiting for pid 3850551
[2024-05-18 13:13:16] 2024-05-18 11:13:00,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 13:13:16] 2024-05-18 11:13:01,932 | INFO     | collected zombie processes
[2024-05-18 13:13:16] 2024-05-18 11:13:01,932 | INFO     | will now attempt to kill all subprocesses of pid=3850551
[2024-05-18 13:13:16] 2024-05-18 11:13:02,160 | INFO     | process IDs to be killed: [3850551] (in reverse order)
[2024-05-18 13:13:16] 2024-05-18 11:13:02,344 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 13:13:16] 2024-05-18 11:13:02,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 13:13:16] 2024-05-18 11:13:02,360 | INFO     | did not find any defunct processes belonging to 3850551
[2024-05-18 13:13:16] 2024-05-18 11:13:02,372 | INFO     | did not find any defunct processes belonging to 3850551
[2024-05-18 13:13:16] 2024-05-18 11:13:02,372 | INFO     | ready for new job
[2024-05-18 13:13:16] 2024-05-18 11:13:02,373 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 13:13:16] 2024-05-18 11:13:02,374 | INFO     | *************************************
[2024-05-18 13:13:16] 2024-05-18 11:13:02,374 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 13:13:16] 2024-05-18 11:13:02,374 | INFO     | *************************************
[2024-05-18 13:13:16] 2024-05-18 11:13:02,375 | INFO     | 
[2024-05-18 13:13:16] 2024-05-18 11:13:02,381 | INFO     | architecture information:
[2024-05-18 13:13:16] 2024-05-18 11:13:02,381 | INFO     | executing command: cat /etc/os-release
[2024-05-18 13:13:16] 2024-05-18 11:13:02,395 | INFO     | cat /etc/os-release:
[2024-05-18 13:13:16] NAME="CentOS Linux"
[2024-05-18 13:13:16] VERSION="7 (Core)"
[2024-05-18 13:13:16] ID="centos"
[2024-05-18 13:13:16] ID_LIKE="rhel fedora"
[2024-05-18 13:13:16] VERSION_ID="7"
[2024-05-18 13:13:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 13:13:16] ANSI_COLOR="0;31"
[2024-05-18 13:13:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 13:13:16] HOME_URL="https://www.centos.org/"
[2024-05-18 13:13:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 13:13:16] 
[2024-05-18 13:13:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 13:13:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 13:13:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 13:13:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 13:13:16] 
[2024-05-18 13:13:16] 2024-05-18 11:13:02,396 | INFO     | *************************************
[2024-05-18 13:13:16] 2024-05-18 11:13:02,899 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/1
[2024-05-18 13:13:16] 2024-05-18 11:13:02,918 | INFO     | sufficient remaining disk space (2974696865792 B)
[2024-05-18 13:13:16] 2024-05-18 11:13:02,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 13:13:16] 2024-05-18 11:13:02,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 13:13:16] 2024-05-18 11:13:02,918 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 13:13:16] 2024-05-18 11:13:02,919 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 13:13:16] 2024-05-18 11:13:02,919 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 13:13:16] 2024-05-18 11:13:02,919 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 13:13:16] 2024-05-18 11:13:03,046 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 13:13:16] 2024-05-18 11:13:03,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 13:13:16] 2024-05-18 11:13:03,166 | INFO     | aborting loop
[2024-05-18 13:13:16] 2024-05-18 11:13:03,604 | INFO     | all data control threads have been joined
[2024-05-18 13:13:16] 2024-05-18 11:13:03,707 | INFO     | all job control threads have been joined
[2024-05-18 13:13:16] 2024-05-18 11:13:03,923 | INFO     | [job] retrieve thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:03,949 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:04,171 | INFO     | [job] job monitor thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:04,288 | INFO     | all payload control threads have been joined
[2024-05-18 13:13:16] 2024-05-18 11:13:04,610 | INFO     | [data] control thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:04,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 13:13:16] 2024-05-18 11:13:04,712 | INFO     | [job] control thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:04,724 | INFO     | [payload] failed_post thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:04,758 | INFO     | [job] validate thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:04,769 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:05,022 | INFO     | [payload] validate_post thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:05,052 | INFO     | [data] copytool_out thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:05,087 | INFO     | [data] copytool_in thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:05,165 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:05,294 | INFO     | [payload] control thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:05,419 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:05,624 | INFO     | [job] queue monitor thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:05,641 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 13:13:16] 2024-05-18 11:13:09,647 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 13:13:16] 2024-05-18 11:13:10,799 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47975783679040)>', '<ExcThread(monitor, started 47975957292800)>']
[2024-05-18 13:13:16] 2024-05-18 11:13:10,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 13:13:16] 2024-05-18 11:13:10,955 | INFO     | [monitor] control thread has ended
[2024-05-18 13:13:16] 2024-05-18 11:13:15,819 | INFO     | all workflow threads have been joined
[2024-05-18 13:13:16] 2024-05-18 11:13:15,819 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 13:13:16] 2024-05-18 11:13:15,820 | INFO     | traces error code: 0
[2024-05-18 13:13:16] 2024-05-18 11:13:15,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 13:13:16] 2024-05-18 11:13:15,896 [wrapper] ==== pilot stdout END ====
[2024-05-18 13:13:16] 2024-05-18 11:13:15,899 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 13:13:16] 2024-05-18 11:13:15,901 [wrapper] pilotpid: 3842835
[2024-05-18 13:13:16] 2024-05-18 11:13:15,903 [wrapper] Pilot exit status: 0
[2024-05-18 13:13:16] 2024-05-18 11:13:15,911 [wrapper] pandaids: 6207116584
[2024-05-18 13:13:16] 2024-05-18 11:13:16,043 [wrapper] cleanup: SIGTERM to supervisor_pilot  556211 3842836
[2024-05-18 13:13:16] 2024-05-18 11:13:16,045 [wrapper] Test setup, not cleaning
[2024-05-18 13:13:16] 2024-05-18 11:13:16,047 [wrapper] ==== wrapper stdout END ====
[2024-05-18 13:13:16] 2024-05-18 11:13:16,049 [wrapper] ==== wrapper stderr END ====
[2024-05-18 13:13:16] 2024-05-18 11:13:16,053 [wrapper] apfmon messages muted
[2024-05-18 13:13:16]  *** Error codes and diagnostics ***
[2024-05-18 13:13:16]     "exeErrorCode": 0,
[2024-05-18 13:13:16]     "exeErrorDiag": "",
[2024-05-18 13:13:16]     "pilotErrorCode": 0,
[2024-05-18 13:13:16]     "pilotErrorDiag": "",
[2024-05-18 13:13:16]  *** Listing of results directory ***
[2024-05-18 13:13:16] total 877008
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc    467845 May 16 03:53 pilot3.tar.gz
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc      5633 May 16 04:05 queuedata.json
[2024-05-18 13:13:16] -rwx------ 1 boinc boinc     32251 May 16 04:05 runpilot2-wrapper.sh
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc       100 May 18 07:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 13:13:16] -rwxr-xr-x 1 boinc boinc      7986 May 18 07:18 run_atlas
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc       105 May 18 07:18 job.xml
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc      6646 May 18 07:18 init_data.xml
[2024-05-18 13:13:16] -rw-r--r-- 2 boinc boinc 540657388 May 18 07:18 EVNT.38776210._000018.pool.root.1
[2024-05-18 13:13:16] -rw-r--r-- 2 boinc boinc     17537 May 18 07:18 start_atlas.sh
[2024-05-18 13:13:16] drwxrwx--x 2 boinc boinc      4096 May 18 07:18 shared
[2024-05-18 13:13:16] -rw-r--r-- 2 boinc boinc    479996 May 18 07:18 input.tar.gz
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc         0 May 18 07:18 boinc_lockfile
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc      2642 May 18 07:18 pandaJob.out
[2024-05-18 13:13:16] -rw------- 1 boinc boinc       424 May 18 07:18 setup.sh.local
[2024-05-18 13:13:16] -rw------- 1 boinc boinc   1019057 May 18 07:18 agis_schedconf.cvmfs.json
[2024-05-18 13:13:16] -rw------- 1 boinc boinc   1324701 May 18 07:18 cric_ddmendpoints.json
[2024-05-18 13:13:16] drwx------ 4 boinc boinc      4096 May 18 07:18 pilot3
[2024-05-18 13:13:16] -rw------- 1 boinc boinc        95 May 18 13:12 pilot_heartbeat.json
[2024-05-18 13:13:16] -rw------- 1 boinc boinc 348307602 May 18 13:12 HITS.38921013._000379.pool.root.1
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc       532 May 18 13:12 boinc_task_state.xml
[2024-05-18 13:13:16] -rw------- 1 boinc boinc      1041 May 18 13:12 memory_monitor_summary.json
[2024-05-18 13:13:16] -rw------- 1 boinc boinc         0 May 18 13:12 agis_ddmendpoints.agis.ALL.json
[2024-05-18 13:13:16] -rw------- 1 boinc boinc    415825 May 18 13:12 log.38921013._000379.job.log.tgz.1
[2024-05-18 13:13:16] -rw------- 1 boinc boinc      7719 May 18 13:12 heartbeat.json
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc      8192 May 18 13:13 boinc_mmap_file
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc        28 May 18 13:13 wrapper_checkpoint.txt
[2024-05-18 13:13:16] -rw------- 1 boinc boinc      4346 May 18 13:13 pilotlog.txt
[2024-05-18 13:13:16] -rw------- 1 boinc boinc   2362864 May 18 13:13 log.38921013._000379.job.log.1
[2024-05-18 13:13:16] -rw------- 1 boinc boinc       357 May 18 13:13 output.list
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc       620 May 18 13:13 runtime_log
[2024-05-18 13:13:16] -rw------- 1 boinc boinc   2795520 May 18 13:13 result.tar.gz
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc     11429 May 18 13:13 runtime_log.err
[2024-05-18 13:13:16] -rw------- 1 boinc boinc       658 May 18 13:13 T6DNDmMgfR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmV5OKDmfDFwGo.diag
[2024-05-18 13:13:16] -rw-r--r-- 1 boinc boinc     21378 May 18 13:13 stderr.txt
[2024-05-18 13:13:16] HITS file was successfully produced:
[2024-05-18 13:13:16] -rw------- 1 boinc boinc 348307602 May 18 13:12 shared/HITS.pool.root.1
[2024-05-18 13:13:16]  *** Contents of shared directory: ***
[2024-05-18 13:13:16] total 871368
[2024-05-18 13:13:16] -rw-r--r-- 2 boinc boinc 540657388 May 18 07:18 ATLAS.root_0
[2024-05-18 13:13:16] -rw-r--r-- 2 boinc boinc     17537 May 18 07:18 start_atlas.sh
[2024-05-18 13:13:16] -rw-r--r-- 2 boinc boinc    479996 May 18 07:18 input.tar.gz
[2024-05-18 13:13:16] -rw------- 1 boinc boinc 348307602 May 18 13:12 HITS.pool.root.1
[2024-05-18 13:13:16] -rw------- 1 boinc boinc   2795520 May 18 13:13 result.tar.gz
13:13:17 (3838189): run_atlas exited; CPU time 81431.761926
13:13:17 (3838189): called boinc_finish(0)

</stderr_txt>
]]>

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