Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:32:18 (2573923): wrapper (7.7.26015): starting
23:32:18 (2573923): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 23:32:18] Arguments: --nthreads 4
[2024-05-19 23:32:18] Threads: 4
[2024-05-19 23:32:18] Checking for CVMFS
[2024-05-19 23:32:18] No cvmfs_config command found, will try listing directly
[2024-05-19 23:32:18] CVMFS is ok
[2024-05-19 23:32:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 23:32:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 23:32:18] Further information can be found at the LHC@home message board.
[2024-05-19 23:32:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 23:32:18] Checking for apptainer binary...
[2024-05-19 23:32:18] which: no apptainer in ((null))
[2024-05-19 23:32:18] apptainer is not installed, using version from CVMFS
[2024-05-19 23:32:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 23:32:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-19 23:32:19] apptainer works
[2024-05-19 23:32:19] Set ATHENA_PROC_NUMBER=4
[2024-05-19 23:32:19] Set ATHENA_CORE_NUMBER=4
[2024-05-19 23:32:19] Starting ATLAS job with PandaID=6207094829
[2024-05-19 23:32:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 07:13:16]  *** The last 200 lines of the pilot log: ***
[2024-05-20 07:13:16] 2024-05-20 05:13:02,590 | WARNING  | GPU info not found in prmon json
[2024-05-20 07:13:16] 2024-05-20 05:13:02,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-20 07:13:16] 2024-05-20 05:13:02,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 07:13:16] 2024-05-20 05:13:02,597 | INFO     | fitting pss+swap vs Time
[2024-05-20 07:13:16] 2024-05-20 05:13:02,597 | INFO     | model: linear, x: [1716154371.0, 1716154432.0, 1716154493.0, 1716154554.0, 1716154615.0, 1716154676.0, 1716154737.0, 1716154798.0, 1716154859.0, 1716154920.0, 1716
[2024-05-20 07:13:16] 2024-05-20 05:13:02,598 | INFO     | sum of square deviations: 28825106042.0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,602 | INFO     | sum of deviations: 202274214652.0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,602 | INFO     | mean x: 1716168157.0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,602 | INFO     | mean y: 2317189.0485651214
[2024-05-20 07:13:16] 2024-05-20 05:13:02,602 | INFO     | -- intersect: -12040537593.936285
[2024-05-20 07:13:16] 2024-05-20 05:13:02,602 | INFO     | intersect: -12040537593.936285
[2024-05-20 07:13:16] 2024-05-20 05:13:02,603 | INFO     | chi2: 4.907832638091748
[2024-05-20 07:13:16] 2024-05-20 05:13:02,603 | INFO     | model: linear, x: [1716154371.0, 1716154432.0, 1716154493.0, 1716154554.0, 1716154615.0, 1716154676.0, 1716154737.0, 1716154798.0, 1716154859.0, 1716154920.0, 1716
[2024-05-20 07:13:16] 2024-05-20 05:13:02,603 | INFO     | sum of square deviations: 27881125552.0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,608 | INFO     | sum of deviations: 229583953935.99997
[2024-05-20 07:13:16] 2024-05-20 05:13:02,608 | INFO     | mean x: 1716168004.5
[2024-05-20 07:13:16] 2024-05-20 05:13:02,608 | INFO     | mean y: 2321557.4776785714
[2024-05-20 07:13:16] 2024-05-20 05:13:02,608 | INFO     | -- intersect: -14129268480.2603
[2024-05-20 07:13:16] 2024-05-20 05:13:02,608 | INFO     | intersect: -14129268480.2603
[2024-05-20 07:13:16] 2024-05-20 05:13:02,608 | INFO     | chi2: 4.052864519448631
[2024-05-20 07:13:16] 2024-05-20 05:13:02,609 | INFO     | current chi2=4.052864519448631 (change=17.420482353194988 %)
[2024-05-20 07:13:16] 2024-05-20 05:13:02,609 | INFO     | right removable region: 447
[2024-05-20 07:13:16] 2024-05-20 05:13:02,609 | INFO     | model: linear, x: [1716154676.0, 1716154737.0, 1716154798.0, 1716154859.0, 1716154920.0, 1716154981.0, 1716155042.0, 1716155103.0, 1716155164.0, 1716155225.0, 1716
[2024-05-20 07:13:16] 2024-05-20 05:13:02,609 | INFO     | sum of square deviations: 27881125552.0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,613 | INFO     | sum of deviations: 94282513963.0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,614 | INFO     | mean x: 1716168309.5
[2024-05-20 07:13:16] 2024-05-20 05:13:02,614 | INFO     | mean y: 2334613.5446428573
[2024-05-20 07:13:16] 2024-05-20 05:13:02,614 | INFO     | -- intersect: -5801041663.410759
[2024-05-20 07:13:16] 2024-05-20 05:13:02,614 | INFO     | intersect: -5801041663.410759
[2024-05-20 07:13:16] 2024-05-20 05:13:02,614 | INFO     | chi2: 2.4279801074665968
[2024-05-20 07:13:16] 2024-05-20 05:13:02,614 | INFO     | current chi2=2.4279801074665968 (change=50.52846568927342 %)
[2024-05-20 07:13:16] 2024-05-20 05:13:02,615 | INFO     | model: linear, x: [1716154981.0, 1716155042.0, 1716155103.0, 1716155164.0, 1716155225.0, 1716155286.0, 1716155347.0, 1716155408.0, 1716155469.0, 1716155530.0, 1716
[2024-05-20 07:13:16] 2024-05-20 05:13:02,615 | INFO     | sum of square deviations: 26957982662.0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,619 | INFO     | sum of deviations: 6632488520.0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,619 | INFO     | mean x: 1716168462.0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,619 | INFO     | mean y: 2349093.0090293456
[2024-05-20 07:13:16] 2024-05-20 05:13:02,619 | INFO     | -- intersect: -419880855.1779244
[2024-05-20 07:13:16] 2024-05-20 05:13:02,619 | INFO     | intersect: -419880855.1779244
[2024-05-20 07:13:16] 2024-05-20 05:13:02,619 | INFO     | chi2: 0.9212353471668041
[2024-05-20 07:13:16] 2024-05-20 05:13:02,619 | INFO     | current chi2=0.9212353471668041 (change=62.057541396908746 %)
[2024-05-20 07:13:16] 2024-05-20 05:13:02,620 | INFO     | model: linear, x: [1716155286.0, 1716155347.0, 1716155408.0, 1716155469.0, 1716155530.0, 1716155591.0, 1716155652.0, 1716155713.0, 1716155774.0, 1716155835.0, 1716
[2024-05-20 07:13:16] 2024-05-20 05:13:02,620 | INFO     | sum of square deviations: 26055444809.5
[2024-05-20 07:13:16] 2024-05-20 05:13:02,622 | INFO     | sum of deviations: -5464905179.5
[2024-05-20 07:13:16] 2024-05-20 05:13:02,622 | INFO     | mean x: 1716168614.5
[2024-05-20 07:13:16] 2024-05-20 05:13:02,622 | INFO     | mean y: 2351131.4497716897
[2024-05-20 07:13:16] 2024-05-20 05:13:02,622 | INFO     | -- intersect: 362302720.0274055
[2024-05-20 07:13:16] 2024-05-20 05:13:02,622 | INFO     | intersect: 362302720.0274055
[2024-05-20 07:13:16] 2024-05-20 05:13:02,623 | INFO     | chi2: 0.8834428009930895
[2024-05-20 07:13:16] 2024-05-20 05:13:02,623 | INFO     | current chi2=0.8834428009930895 (change=4.102376910519447 %)
[2024-05-20 07:13:16] 2024-05-20 05:13:02,623 | INFO     | left removable region: 30
[2024-05-20 07:13:16] 2024-05-20 05:13:02,623 | INFO     | model: linear, x: [1716156201.0, 1716156262.0, 1716156323.0, 1716156384.0, 1716156445.0, 1716156506.0, 1716156567.0, 1716156628.0, 1716156689.0, 1716156750.0, 1716
[2024-05-20 07:13:16] 2024-05-20 05:13:02,623 | INFO     | sum of square deviations: 22484544368.0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,625 | INFO     | sum of deviations: 24704017656.000004
[2024-05-20 07:13:16] 2024-05-20 05:13:02,625 | INFO     | mean x: 1716168889.0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,625 | INFO     | mean y: 2355715.889688249
[2024-05-20 07:13:16] 2024-05-20 05:13:02,625 | INFO     | -- intersect: -1883218029.3747375
[2024-05-20 07:13:16] 2024-05-20 05:13:02,625 | INFO     | intersect: -1883218029.3747375
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | chi2: 0.0014991844644327537
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | -- intersect: -1883218029.3747375
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | current memory leak: 1.10 B/s (using 417 data points, chi2=0.00)
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | ..............................
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | . Timing measurements:
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | . get job = 0 s
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | . initial setup = 1 s
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | . payload setup = 4 s
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | . stage-in = 0 s
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | . payload execution = 27604 s
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | . stage-out = 0 s
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | . log creation = 0 s
[2024-05-20 07:13:16] 2024-05-20 05:13:02,626 | INFO     | ..............................
[2024-05-20 07:13:16] 2024-05-20 05:13:02,680 | INFO     | 
[2024-05-20 07:13:16] 2024-05-20 05:13:02,680 | INFO     | job summary report
[2024-05-20 07:13:16] 2024-05-20 05:13:02,680 | INFO     | --------------------------------------------------
[2024-05-20 07:13:16] 2024-05-20 05:13:02,680 | INFO     | PanDA job id: 6207094829
[2024-05-20 07:13:16] 2024-05-20 05:13:02,680 | INFO     | task id: 38921013
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | errors: (none)
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | pilot state: finished 
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | transexitcode: 0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | exeerrorcode: 0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | exeerrordiag: 
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | exitcode: 0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | exitmsg: OK
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | cpuconsumptiontime: 107149 s
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | nevents: 400
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | neventsw: 0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | pid: 2586169
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | pgrp: 2586169
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | corecount: 4
[2024-05-20 07:13:16] 2024-05-20 05:13:02,681 | INFO     | event service: False
[2024-05-20 07:13:16] 2024-05-20 05:13:02,682 | INFO     | sizes: {0: 2392220, 4: 2392426, 11: 2392454, 27612: 2429142, 27613: 2429141, 27614: 2438365, 27621: 2438479}
[2024-05-20 07:13:16] 2024-05-20 05:13:02,682 | INFO     | --------------------------------------------------
[2024-05-20 07:13:16] 2024-05-20 05:13:02,682 | INFO     | 
[2024-05-20 07:13:16] 2024-05-20 05:13:02,682 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2024-05-20 07:13:16] 2024-05-20 05:13:02,702 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,702 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,702 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,702 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,703 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 07:13:16] 2024-05-20 05:13:02,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,704 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 07:13:16] 2024-05-20 05:13:02,704 | INFO     | job 6207094829 has completed (purged errors)
[2024-05-20 07:13:16] 2024-05-20 05:13:02,704 | INFO     | overall cleanup function is called
[2024-05-20 07:13:16] 2024-05-20 05:13:03,711 | INFO     | --- collectZombieJob: --- 10, [2586169]
[2024-05-20 07:13:16] 2024-05-20 05:13:03,711 | INFO     | zombie collector waiting for pid 2586169
[2024-05-20 07:13:16] 2024-05-20 05:13:03,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 07:13:16] 2024-05-20 05:13:04,717 | INFO     | collected zombie processes
[2024-05-20 07:13:16] 2024-05-20 05:13:04,717 | INFO     | will now attempt to kill all subprocesses of pid=2586169
[2024-05-20 07:13:16] 2024-05-20 05:13:04,895 | INFO     | process IDs to be killed: [2586169] (in reverse order)
[2024-05-20 07:13:16] 2024-05-20 05:13:05,035 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 07:13:16] 2024-05-20 05:13:05,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 07:13:16] 2024-05-20 05:13:05,061 | INFO     | did not find any defunct processes belonging to 2586169
[2024-05-20 07:13:16] 2024-05-20 05:13:05,073 | INFO     | did not find any defunct processes belonging to 2586169
[2024-05-20 07:13:16] 2024-05-20 05:13:05,073 | INFO     | ready for new job
[2024-05-20 07:13:16] 2024-05-20 05:13:05,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 07:13:16] 2024-05-20 05:13:05,077 | INFO     | *************************************
[2024-05-20 07:13:16] 2024-05-20 05:13:05,077 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 07:13:16] 2024-05-20 05:13:05,077 | INFO     | *************************************
[2024-05-20 07:13:16] 2024-05-20 05:13:05,077 | INFO     | 
[2024-05-20 07:13:16] 2024-05-20 05:13:05,083 | INFO     | architecture information:
[2024-05-20 07:13:16] 2024-05-20 05:13:05,083 | INFO     | executing command: cat /etc/os-release
[2024-05-20 07:13:16] 2024-05-20 05:13:05,102 | INFO     | cat /etc/os-release:
[2024-05-20 07:13:16] NAME="CentOS Linux"
[2024-05-20 07:13:16] VERSION="7 (Core)"
[2024-05-20 07:13:16] ID="centos"
[2024-05-20 07:13:16] ID_LIKE="rhel fedora"
[2024-05-20 07:13:16] VERSION_ID="7"
[2024-05-20 07:13:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 07:13:16] ANSI_COLOR="0;31"
[2024-05-20 07:13:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 07:13:16] HOME_URL="https://www.centos.org/"
[2024-05-20 07:13:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 07:13:16] 
[2024-05-20 07:13:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 07:13:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 07:13:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 07:13:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 07:13:16] 
[2024-05-20 07:13:16] 2024-05-20 05:13:05,102 | INFO     | *************************************
[2024-05-20 07:13:16] 2024-05-20 05:13:05,604 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2024-05-20 07:13:16] 2024-05-20 05:13:05,624 | INFO     | sufficient remaining disk space (3016162803712 B)
[2024-05-20 07:13:16] 2024-05-20 05:13:05,624 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 07:13:16] 2024-05-20 05:13:05,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 07:13:16] 2024-05-20 05:13:05,812 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 07:13:16] 2024-05-20 05:13:05,812 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 07:13:16] 2024-05-20 05:13:05,812 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 07:13:16] 2024-05-20 05:13:06,016 | INFO     | all data control threads have been joined
[2024-05-20 07:13:16] 2024-05-20 05:13:06,083 | INFO     | all payload control threads have been joined
[2024-05-20 07:13:16] 2024-05-20 05:13:06,133 | INFO     | all job control threads have been joined
[2024-05-20 07:13:16] 2024-05-20 05:13:06,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 07:13:16] 2024-05-20 05:13:06,405 | INFO     | aborting loop
[2024-05-20 07:13:16] 2024-05-20 05:13:06,518 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 07:13:16] 2024-05-20 05:13:06,629 | INFO     | [job] retrieve thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:06,807 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:06,826 | INFO     | [payload] validate_post thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:06,891 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 07:13:16] 2024-05-20 05:13:06,905 | INFO     | [job] validate thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:07,021 | INFO     | [data] control thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:07,089 | INFO     | [payload] control thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:07,138 | INFO     | [job] control thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:07,410 | INFO     | [job] job monitor thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:07,446 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:07,659 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:07,691 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 07:13:16] 2024-05-20 05:13:07,806 | INFO     | [payload] failed_post thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:07,902 | INFO     | [data] copytool_in thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:08,127 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:08,523 | INFO     | [data] copytool_out thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:08,695 | INFO     | [job] queue monitor thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:10,897 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 07:13:16] 2024-05-20 05:13:10,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47713461535808)>', '<ExcThread(monitor, started 47713634887424)>']
[2024-05-20 07:13:16] 2024-05-20 05:13:11,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 07:13:16] 2024-05-20 05:13:11,843 | INFO     | [monitor] control thread has ended
[2024-05-20 07:13:16] 2024-05-20 05:13:15,985 | INFO     | all workflow threads have been joined
[2024-05-20 07:13:16] 2024-05-20 05:13:15,985 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 07:13:16] 2024-05-20 05:13:15,986 | INFO     | traces error code: 0
[2024-05-20 07:13:16] 2024-05-20 05:13:15,986 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 07:13:16] 2024-05-20 05:13:16,054 [wrapper] ==== pilot stdout END ====
[2024-05-20 07:13:16] 2024-05-20 05:13:16,057 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 07:13:16] 2024-05-20 05:13:16,060 [wrapper] pilotpid: 2578620
[2024-05-20 07:13:16] 2024-05-20 05:13:16,062 [wrapper] Pilot exit status: 0
[2024-05-20 07:13:16] 2024-05-20 05:13:16,070 [wrapper] pandaids: 6207094829
[2024-05-20 07:13:16] 2024-05-20 05:13:16,162 [wrapper] cleanup: SIGTERM to supervisor_pilot 1360818 2578621
[2024-05-20 07:13:16] 2024-05-20 05:13:16,165 [wrapper] Test setup, not cleaning
[2024-05-20 07:13:16] 2024-05-20 05:13:16,167 [wrapper] ==== wrapper stdout END ====
[2024-05-20 07:13:16] 2024-05-20 05:13:16,169 [wrapper] ==== wrapper stderr END ====
[2024-05-20 07:13:16] 2024-05-20 05:13:16,172 [wrapper] apfmon messages muted
[2024-05-20 07:13:16]  *** Error codes and diagnostics ***
[2024-05-20 07:13:16]     "exeErrorCode": 0,
[2024-05-20 07:13:16]     "exeErrorDiag": "",
[2024-05-20 07:13:16]     "pilotErrorCode": 0,
[2024-05-20 07:13:16]     "pilotErrorDiag": "",
[2024-05-20 07:13:16]  *** Listing of results directory ***
[2024-05-20 07:13:16] total 868704
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc      5633 May 16 03:27 queuedata.json
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc    467845 May 16 03:27 pilot3.tar.gz
[2024-05-20 07:13:16] -rwx------ 1 boinc boinc     32251 May 16 03:27 runpilot2-wrapper.sh
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc       100 May 19 23:32 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 07:13:16] -rwxr-xr-x 1 boinc boinc      7986 May 19 23:32 run_atlas
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc       105 May 19 23:32 job.xml
[2024-05-20 07:13:16] drwxrwx--x 2 boinc boinc      4096 May 19 23:32 shared
[2024-05-20 07:13:16] -rw-r--r-- 2 boinc boinc    479994 May 19 23:32 input.tar.gz
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc      6646 May 19 23:32 init_data.xml
[2024-05-20 07:13:16] -rw-r--r-- 2 boinc boinc 538249698 May 19 23:32 EVNT.38776210._000014.pool.root.1
[2024-05-20 07:13:16] -rw-r--r-- 2 boinc boinc     17537 May 19 23:32 start_atlas.sh
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc         0 May 19 23:32 boinc_lockfile
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc      2642 May 19 23:32 pandaJob.out
[2024-05-20 07:13:16] -rw------- 1 boinc boinc       424 May 19 23:32 setup.sh.local
[2024-05-20 07:13:16] -rw------- 1 boinc boinc   1013693 May 19 23:32 agis_schedconf.cvmfs.json
[2024-05-20 07:13:16] -rw------- 1 boinc boinc   1324701 May 19 23:32 cric_ddmendpoints.json
[2024-05-20 07:13:16] drwx------ 4 boinc boinc      4096 May 19 23:32 pilot3
[2024-05-20 07:13:16] -rw------- 1 boinc boinc 340088737 May 20 07:12 HITS.38921013._000283.pool.root.1
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc       532 May 20 07:12 boinc_task_state.xml
[2024-05-20 07:13:16] -rw------- 1 boinc boinc        95 May 20 07:12 pilot_heartbeat.json
[2024-05-20 07:13:16] -rw------- 1 boinc boinc      1042 May 20 07:12 memory_monitor_summary.json
[2024-05-20 07:13:16] -rw------- 1 boinc boinc         0 May 20 07:12 agis_ddmendpoints.agis.ALL.json
[2024-05-20 07:13:16] -rw------- 1 boinc boinc    501348 May 20 07:12 log.38921013._000283.job.log.tgz.1
[2024-05-20 07:13:16] -rw------- 1 boinc boinc      7722 May 20 07:13 heartbeat.json
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc      8192 May 20 07:13 boinc_mmap_file
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc        29 May 20 07:13 wrapper_checkpoint.txt
[2024-05-20 07:13:16] -rw------- 1 boinc boinc      4223 May 20 07:13 pilotlog.txt
[2024-05-20 07:13:16] -rw------- 1 boinc boinc   3338636 May 20 07:13 log.38921013._000283.job.log.1
[2024-05-20 07:13:16] -rw------- 1 boinc boinc       357 May 20 07:13 output.list
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc       620 May 20 07:13 runtime_log
[2024-05-20 07:13:16] -rw------- 1 boinc boinc   3860480 May 20 07:13 result.tar.gz
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc     11429 May 20 07:13 runtime_log.err
[2024-05-20 07:13:16] -rw------- 1 boinc boinc       660 May 20 07:13 qXlNDmV5eR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmk2OKDmlxrqmn.diag
[2024-05-20 07:13:16] -rw-r--r-- 1 boinc boinc     21287 May 20 07:13 stderr.txt
[2024-05-20 07:13:16] HITS file was successfully produced:
[2024-05-20 07:13:16] -rw------- 1 boinc boinc 340088737 May 20 07:12 shared/HITS.pool.root.1
[2024-05-20 07:13:16]  *** Contents of shared directory: ***
[2024-05-20 07:13:16] total 862028
[2024-05-20 07:13:16] -rw-r--r-- 2 boinc boinc    479994 May 19 23:32 input.tar.gz
[2024-05-20 07:13:16] -rw-r--r-- 2 boinc boinc 538249698 May 19 23:32 ATLAS.root_0
[2024-05-20 07:13:16] -rw-r--r-- 2 boinc boinc     17537 May 19 23:32 start_atlas.sh
[2024-05-20 07:13:16] -rw------- 1 boinc boinc 340088737 May 20 07:12 HITS.pool.root.1
[2024-05-20 07:13:16] -rw------- 1 boinc boinc   3860480 May 20 07:13 result.tar.gz
07:13:18 (2573923): run_atlas exited; CPU time 106225.775966
07:13:18 (2573923): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN