Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:59:32 (334038): wrapper (7.7.26015): starting
13:59:32 (334038): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 13:59:32] Arguments: --nthreads 4
[2024-05-18 13:59:32] Threads: 4
[2024-05-18 13:59:32] Checking for CVMFS
[2024-05-18 13:59:32] No cvmfs_config command found, will try listing directly
[2024-05-18 13:59:32] CVMFS is ok
[2024-05-18 13:59:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 13:59:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 13:59:32] Further information can be found at the LHC@home message board.
[2024-05-18 13:59:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 13:59:32] Checking for apptainer binary...
[2024-05-18 13:59:32] which: no apptainer in ((null))
[2024-05-18 13:59:32] apptainer is not installed, using version from CVMFS
[2024-05-18 13:59:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 13:59:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-05-18 13:59:33] apptainer works
[2024-05-18 13:59:33] Set ATHENA_PROC_NUMBER=4
[2024-05-18 13:59:33] Set ATHENA_CORE_NUMBER=4
[2024-05-18 13:59:33] Starting ATLAS job with PandaID=6207090369
[2024-05-18 13:59:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 17:42:07]  *** The last 200 lines of the pilot log: ***
[2024-05-18 17:42:07] 2024-05-18 15:41:50,447 | INFO     | chi2: 0.012063670797716215
[2024-05-18 17:42:07] 2024-05-18 15:41:50,447 | INFO     | current chi2=0.012063670797716215 (change=70.33363556583166 %)
[2024-05-18 17:42:07] 2024-05-18 15:41:50,447 | INFO     | model: linear, x: [1716034828.0, 1716034889.0, 1716034950.0, 1716035011.0, 1716035072.0, 1716035133.0, 1716035194.0, 1716035255.0, 1716035316.0, 1716035377.0, 1716
[2024-05-18 17:42:07] 2024-05-18 15:41:50,448 | INFO     | sum of square deviations: 2406926989.5
[2024-05-18 17:42:07] 2024-05-18 15:41:50,449 | INFO     | sum of deviations: 2214915154.499999
[2024-05-18 17:42:07] 2024-05-18 15:41:50,449 | INFO     | mean x: 1716040836.5
[2024-05-18 17:42:07] 2024-05-18 15:41:50,449 | INFO     | mean y: 2360803.4292929294
[2024-05-18 17:42:07] 2024-05-18 15:41:50,449 | INFO     | -- intersect: -1576783421.1715028
[2024-05-18 17:42:07] 2024-05-18 15:41:50,449 | INFO     | intersect: -1576783421.1715028
[2024-05-18 17:42:07] 2024-05-18 15:41:50,449 | INFO     | chi2: 0.0010537313339393616
[2024-05-18 17:42:07] 2024-05-18 15:41:50,449 | INFO     | current chi2=0.0010537313339393616 (change=91.26525125222379 %)
[2024-05-18 17:42:07] 2024-05-18 15:41:50,449 | INFO     | model: linear, x: [1716035133.0, 1716035194.0, 1716035255.0, 1716035316.0, 1716035377.0, 1716035438.0, 1716035499.0, 1716035560.0, 1716035621.0, 1716035682.0, 1716
[2024-05-18 17:42:07] 2024-05-18 15:41:50,449 | INFO     | sum of square deviations: 2229146912.0
[2024-05-18 17:42:07] 2024-05-18 15:41:50,450 | INFO     | sum of deviations: 1353120910.0
[2024-05-18 17:42:07] 2024-05-18 15:41:50,450 | INFO     | mean x: 1716040989.0
[2024-05-18 17:42:07] 2024-05-18 15:41:50,450 | INFO     | mean y: 2361540.5699481866
[2024-05-18 17:42:07] 2024-05-18 15:41:50,450 | INFO     | -- intersect: -1039297460.0697458
[2024-05-18 17:42:07] 2024-05-18 15:41:50,451 | INFO     | intersect: -1039297460.0697458
[2024-05-18 17:42:07] 2024-05-18 15:41:50,451 | INFO     | chi2: 0.0004754860581887171
[2024-05-18 17:42:07] 2024-05-18 15:41:50,451 | INFO     | current chi2=0.0004754860581887171 (change=54.8759685819422 %)
[2024-05-18 17:42:07] 2024-05-18 15:41:50,451 | INFO     | model: linear, x: [1716035438.0, 1716035499.0, 1716035560.0, 1716035621.0, 1716035682.0, 1716035743.0, 1716035804.0, 1716035865.0, 1716035926.0, 1716035987.0, 1716
[2024-05-18 17:42:07] 2024-05-18 15:41:50,451 | INFO     | sum of square deviations: 2060343747.0
[2024-05-18 17:42:07] 2024-05-18 15:41:50,452 | INFO     | sum of deviations: 847426091.0
[2024-05-18 17:42:07] 2024-05-18 15:41:50,452 | INFO     | mean x: 1716041141.5
[2024-05-18 17:42:07] 2024-05-18 15:41:50,452 | INFO     | mean y: 2361997.4574468085
[2024-05-18 17:42:07] 2024-05-18 15:41:50,452 | INFO     | -- intersect: -703451310.9547843
[2024-05-18 17:42:07] 2024-05-18 15:41:50,452 | INFO     | intersect: -703451310.9547843
[2024-05-18 17:42:07] 2024-05-18 15:41:50,452 | INFO     | chi2: 0.0002879358734299232
[2024-05-18 17:42:07] 2024-05-18 15:41:50,453 | INFO     | current chi2=0.0002879358734299232 (change=39.443887266271126 %)
[2024-05-18 17:42:07] 2024-05-18 15:41:50,453 | INFO     | model: linear, x: [1716035743.0, 1716035804.0, 1716035865.0, 1716035926.0, 1716035987.0, 1716036048.0, 1716036109.0, 1716036170.0, 1716036231.0, 1716036292.0, 1716
[2024-05-18 17:42:07] 2024-05-18 15:41:50,453 | INFO     | sum of square deviations: 1900284932.0
[2024-05-18 17:42:07] 2024-05-18 15:41:50,454 | INFO     | sum of deviations: 501189786.0000001
[2024-05-18 17:42:07] 2024-05-18 15:41:50,454 | INFO     | mean x: 1716041294.0
[2024-05-18 17:42:07] 2024-05-18 15:41:50,454 | INFO     | mean y: 2362326.612021858
[2024-05-18 17:42:07] 2024-05-18 15:41:50,454 | INFO     | -- intersect: -450234204.7943658
[2024-05-18 17:42:07] 2024-05-18 15:41:50,454 | INFO     | intersect: -450234204.7943658
[2024-05-18 17:42:07] 2024-05-18 15:41:50,454 | INFO     | chi2: 0.0001861202015949105
[2024-05-18 17:42:07] 2024-05-18 15:41:50,454 | INFO     | current chi2=0.0001861202015949105 (change=35.3605372690014 %)
[2024-05-18 17:42:07] 2024-05-18 15:41:50,454 | INFO     | model: linear, x: [1716036048.0, 1716036109.0, 1716036170.0, 1716036231.0, 1716036292.0, 1716036353.0, 1716036414.0, 1716036475.0, 1716036536.0, 1716036597.0, 1716
[2024-05-18 17:42:07] 2024-05-18 15:41:50,454 | INFO     | sum of square deviations: 1748737904.5
[2024-05-18 17:42:07] 2024-05-18 15:41:50,455 | INFO     | sum of deviations: 298773547.00000006
[2024-05-18 17:42:07] 2024-05-18 15:41:50,455 | INFO     | mean x: 1716041446.5
[2024-05-18 17:42:07] 2024-05-18 15:41:50,455 | INFO     | mean y: 2362530.4831460672
[2024-05-18 17:42:07] 2024-05-18 15:41:50,455 | INFO     | -- intersect: -290824795.3307869
[2024-05-18 17:42:07] 2024-05-18 15:41:50,455 | INFO     | intersect: -290824795.3307869
[2024-05-18 17:42:07] 2024-05-18 15:41:50,456 | INFO     | chi2: 0.00014313197871557403
[2024-05-18 17:42:07] 2024-05-18 15:41:50,456 | INFO     | current chi2=0.00014313197871557403 (change=23.097021446871242 %)
[2024-05-18 17:42:07] 2024-05-18 15:41:50,456 | INFO     | left removable region: 80
[2024-05-18 17:42:07] 2024-05-18 15:41:50,456 | INFO     | model: linear, x: [1716038488.0, 1716038549.0, 1716038610.0, 1716038671.0, 1716038732.0, 1716038793.0, 1716038854.0, 1716038915.0, 1716038976.0, 1716039037.0, 1716
[2024-05-18 17:42:07] 2024-05-18 15:41:50,456 | INFO     | sum of square deviations: 713140813.0
[2024-05-18 17:42:07] 2024-05-18 15:41:50,457 | INFO     | sum of deviations: -299628614.50000006
[2024-05-18 17:42:07] 2024-05-18 15:41:50,457 | INFO     | mean x: 1716042483.5
[2024-05-18 17:42:07] 2024-05-18 15:41:50,457 | INFO     | mean y: 2363421.2196969697
[2024-05-18 17:42:07] 2024-05-18 15:41:50,457 | INFO     | -- intersect: 723364691.0688316
[2024-05-18 17:42:07] 2024-05-18 15:41:50,457 | INFO     | intersect: 723364691.0688316
[2024-05-18 17:42:07] 2024-05-18 15:41:50,457 | INFO     | chi2: 3.89084883784524e-05
[2024-05-18 17:42:07] 2024-05-18 15:41:50,457 | INFO     | -- intersect: 723364691.0688316
[2024-05-18 17:42:07] 2024-05-18 15:41:50,457 | INFO     | current memory leak: -0.42 B/s (using 132 data points, chi2=0.00)
[2024-05-18 17:42:07] 2024-05-18 15:41:50,458 | INFO     | ..............................
[2024-05-18 17:42:07] 2024-05-18 15:41:50,458 | INFO     | . Timing measurements:
[2024-05-18 17:42:07] 2024-05-18 15:41:50,458 | INFO     | . get job = 0 s
[2024-05-18 17:42:07] 2024-05-18 15:41:50,458 | INFO     | . initial setup = 1 s
[2024-05-18 17:42:07] 2024-05-18 15:41:50,458 | INFO     | . payload setup = 5 s
[2024-05-18 17:42:07] 2024-05-18 15:41:50,458 | INFO     | . stage-in = 0 s
[2024-05-18 17:42:07] 2024-05-18 15:41:50,458 | INFO     | . payload execution = 13295 s
[2024-05-18 17:42:07] 2024-05-18 15:41:50,458 | INFO     | . stage-out = 1 s
[2024-05-18 17:42:07] 2024-05-18 15:41:50,458 | INFO     | . log creation = 0 s
[2024-05-18 17:42:07] 2024-05-18 15:41:50,458 | INFO     | ..............................
[2024-05-18 17:42:07] 2024-05-18 15:41:50,517 | INFO     | 
[2024-05-18 17:42:07] 2024-05-18 15:41:50,517 | INFO     | job summary report
[2024-05-18 17:42:07] 2024-05-18 15:41:50,517 | INFO     | --------------------------------------------------
[2024-05-18 17:42:07] 2024-05-18 15:41:50,517 | INFO     | PanDA job id: 6207090369
[2024-05-18 17:42:07] 2024-05-18 15:41:50,517 | INFO     | task id: 38920982
[2024-05-18 17:42:07] 2024-05-18 15:41:50,518 | INFO     | errors: (none)
[2024-05-18 17:42:07] 2024-05-18 15:41:50,518 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 17:42:07] 2024-05-18 15:41:50,518 | INFO     | pilot state: finished 
[2024-05-18 17:42:07] 2024-05-18 15:41:50,518 | INFO     | transexitcode: 0
[2024-05-18 17:42:07] 2024-05-18 15:41:50,518 | INFO     | exeerrorcode: 0
[2024-05-18 17:42:07] 2024-05-18 15:41:50,518 | INFO     | exeerrordiag: 
[2024-05-18 17:42:07] 2024-05-18 15:41:50,518 | INFO     | exitcode: 0
[2024-05-18 17:42:07] 2024-05-18 15:41:50,518 | INFO     | exitmsg: OK
[2024-05-18 17:42:07] 2024-05-18 15:41:50,518 | INFO     | cpuconsumptiontime: 50462 s
[2024-05-18 17:42:07] 2024-05-18 15:41:50,518 | INFO     | nevents: 400
[2024-05-18 17:42:07] 2024-05-18 15:41:50,519 | INFO     | neventsw: 0
[2024-05-18 17:42:07] 2024-05-18 15:41:50,519 | INFO     | pid: 345764
[2024-05-18 17:42:07] 2024-05-18 15:41:50,519 | INFO     | pgrp: 345764
[2024-05-18 17:42:07] 2024-05-18 15:41:50,519 | INFO     | corecount: 4
[2024-05-18 17:42:07] 2024-05-18 15:41:50,519 | INFO     | event service: False
[2024-05-18 17:42:07] 2024-05-18 15:41:50,519 | INFO     | sizes: {0: 2392195, 1: 2392195, 5: 2392429, 11: 2392485, 13305: 2422623, 13307: 2431789, 13312: 2431903}
[2024-05-18 17:42:07] 2024-05-18 15:41:50,519 | INFO     | --------------------------------------------------
[2024-05-18 17:42:07] 2024-05-18 15:41:50,519 | INFO     | 
[2024-05-18 17:42:07] 2024-05-18 15:41:50,519 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2024-05-18 17:42:07] 2024-05-18 15:41:50,541 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,542 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,542 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,542 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,544 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 17:42:07] 2024-05-18 15:41:50,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,544 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 17:42:07] 2024-05-18 15:41:50,544 | INFO     | job 6207090369 has completed (purged errors)
[2024-05-18 17:42:07] 2024-05-18 15:41:50,544 | INFO     | overall cleanup function is called
[2024-05-18 17:42:07] 2024-05-18 15:41:51,552 | INFO     | --- collectZombieJob: --- 10, [345764]
[2024-05-18 17:42:07] 2024-05-18 15:41:51,552 | INFO     | zombie collector waiting for pid 345764
[2024-05-18 17:42:07] 2024-05-18 15:41:51,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 17:42:07] 2024-05-18 15:41:52,557 | INFO     | collected zombie processes
[2024-05-18 17:42:07] 2024-05-18 15:41:52,558 | INFO     | will now attempt to kill all subprocesses of pid=345764
[2024-05-18 17:42:07] 2024-05-18 15:41:52,761 | INFO     | process IDs to be killed: [345764] (in reverse order)
[2024-05-18 17:42:07] 2024-05-18 15:41:52,879 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 17:42:07] 2024-05-18 15:41:52,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 17:42:07] 2024-05-18 15:41:52,886 | INFO     | did not find any defunct processes belonging to 345764
[2024-05-18 17:42:07] 2024-05-18 15:41:52,892 | INFO     | did not find any defunct processes belonging to 345764
[2024-05-18 17:42:07] 2024-05-18 15:41:52,893 | INFO     | ready for new job
[2024-05-18 17:42:07] 2024-05-18 15:41:52,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 17:42:07] 2024-05-18 15:41:52,894 | INFO     | *************************************
[2024-05-18 17:42:07] 2024-05-18 15:41:52,894 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 17:42:07] 2024-05-18 15:41:52,894 | INFO     | *************************************
[2024-05-18 17:42:07] 2024-05-18 15:41:52,894 | INFO     | 
[2024-05-18 17:42:07] 2024-05-18 15:41:52,897 | INFO     | architecture information:
[2024-05-18 17:42:07] 2024-05-18 15:41:52,897 | INFO     | executing command: cat /etc/os-release
[2024-05-18 17:42:07] 2024-05-18 15:41:52,913 | INFO     | cat /etc/os-release:
[2024-05-18 17:42:07] NAME="CentOS Linux"
[2024-05-18 17:42:07] VERSION="7 (Core)"
[2024-05-18 17:42:07] ID="centos"
[2024-05-18 17:42:07] ID_LIKE="rhel fedora"
[2024-05-18 17:42:07] VERSION_ID="7"
[2024-05-18 17:42:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 17:42:07] ANSI_COLOR="0;31"
[2024-05-18 17:42:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 17:42:07] HOME_URL="https://www.centos.org/"
[2024-05-18 17:42:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 17:42:07] 
[2024-05-18 17:42:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 17:42:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 17:42:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 17:42:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 17:42:07] 
[2024-05-18 17:42:07] 2024-05-18 15:41:52,913 | INFO     | *************************************
[2024-05-18 17:42:07] 2024-05-18 15:41:53,416 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2024-05-18 17:42:07] 2024-05-18 15:41:53,443 | INFO     | sufficient remaining disk space (564575338496 B)
[2024-05-18 17:42:07] 2024-05-18 15:41:53,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 17:42:07] 2024-05-18 15:41:53,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 17:42:07] 2024-05-18 15:41:53,444 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 17:42:07] 2024-05-18 15:41:53,640 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 17:42:07] 2024-05-18 15:41:53,640 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 17:42:07] 2024-05-18 15:41:53,641 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 17:42:07] 2024-05-18 15:41:53,641 | INFO     | will abort loop
[2024-05-18 17:42:07] 2024-05-18 15:41:54,105 | INFO     | all data control threads have been joined
[2024-05-18 17:42:07] 2024-05-18 15:41:54,308 | INFO     | all payload control threads have been joined
[2024-05-18 17:42:07] 2024-05-18 15:41:54,372 | INFO     | all job control threads have been joined
[2024-05-18 17:42:07] 2024-05-18 15:41:54,397 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 17:42:07] 2024-05-18 15:41:54,397 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 17:42:07] 2024-05-18 15:41:54,397 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 17:42:07] 2024-05-18 15:41:54,449 | INFO     | [job] retrieve thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:54,642 | INFO     | [job] job monitor thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:54,867 | INFO     | [payload] validate_post thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:55,047 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:55,106 | INFO     | [data] control thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:55,302 | INFO     | [job] validate thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:55,313 | INFO     | [payload] control thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:55,376 | INFO     | [job] control thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:55,449 | INFO     | [data] copytool_out thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:55,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 17:42:07] 2024-05-18 15:41:55,552 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:55,590 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:55,637 | INFO     | [payload] failed_post thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:55,746 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:55,782 | INFO     | [data] copytool_in thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:41:56,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 17:42:07] 2024-05-18 15:41:56,527 | INFO     | [job] queue monitor thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:42:00,004 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 17:42:07] 2024-05-18 15:42:01,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47031542899776)>', '<ExcThread(monitor, started 47031848552192)>']
[2024-05-18 17:42:07] 2024-05-18 15:42:02,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 17:42:07] 2024-05-18 15:42:02,428 | INFO     | [monitor] control thread has ended
[2024-05-18 17:42:07] 2024-05-18 15:42:06,674 | INFO     | all workflow threads have been joined
[2024-05-18 17:42:07] 2024-05-18 15:42:06,675 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 17:42:07] 2024-05-18 15:42:06,675 | INFO     | traces error code: 0
[2024-05-18 17:42:07] 2024-05-18 15:42:06,675 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 17:42:07] 2024-05-18 15:42:06,750 [wrapper] ==== pilot stdout END ====
[2024-05-18 17:42:07] 2024-05-18 15:42:06,752 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 17:42:07] 2024-05-18 15:42:06,755 [wrapper] pilotpid: 338428
[2024-05-18 17:42:07] 2024-05-18 15:42:06,757 [wrapper] Pilot exit status: 0
[2024-05-18 17:42:07] 2024-05-18 15:42:06,765 [wrapper] pandaids: 6207090369
[2024-05-18 17:42:07] 2024-05-18 15:42:06,851 [wrapper] cleanup: SIGTERM to supervisor_pilot  780344 338429
[2024-05-18 17:42:07] 2024-05-18 15:42:06,854 [wrapper] Test setup, not cleaning
[2024-05-18 17:42:07] 2024-05-18 15:42:06,856 [wrapper] ==== wrapper stdout END ====
[2024-05-18 17:42:07] 2024-05-18 15:42:06,858 [wrapper] ==== wrapper stderr END ====
[2024-05-18 17:42:07] 2024-05-18 15:42:06,863 [wrapper] apfmon messages muted
[2024-05-18 17:42:07]  *** Error codes and diagnostics ***
[2024-05-18 17:42:07]     "exeErrorCode": 0,
[2024-05-18 17:42:07]     "exeErrorDiag": "",
[2024-05-18 17:42:07]     "pilotErrorCode": 0,
[2024-05-18 17:42:07]     "pilotErrorDiag": "",
[2024-05-18 17:42:07]  *** Listing of results directory ***
[2024-05-18 17:42:07] total 934600
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc    467845 May 16 02:51 pilot3.tar.gz
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc      5633 May 16 03:17 queuedata.json
[2024-05-18 17:42:07] -rwx------ 1 boinc boinc     32251 May 16 03:18 runpilot2-wrapper.sh
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc       100 May 18 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 17:42:07] -rwxr-xr-x 1 boinc boinc      7986 May 18 13:59 run_atlas
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc       105 May 18 13:59 job.xml
[2024-05-18 17:42:07] -rw-r--r-- 2 boinc boinc 634017480 May 18 13:59 EVNT.38776160._000126.pool.root.1
[2024-05-18 17:42:07] -rw-r--r-- 2 boinc boinc     17537 May 18 13:59 start_atlas.sh
[2024-05-18 17:42:07] drwxrwx--x 2 boinc boinc      4096 May 18 13:59 shared
[2024-05-18 17:42:07] -rw-r--r-- 2 boinc boinc    480005 May 18 13:59 input.tar.gz
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc      6663 May 18 13:59 init_data.xml
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc         0 May 18 13:59 boinc_lockfile
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc      2624 May 18 13:59 pandaJob.out
[2024-05-18 17:42:07] -rw------- 1 boinc boinc       424 May 18 13:59 setup.sh.local
[2024-05-18 17:42:07] -rw------- 1 boinc boinc   1019073 May 18 13:59 agis_schedconf.cvmfs.json
[2024-05-18 17:42:07] -rw------- 1 boinc boinc   1324701 May 18 13:59 cric_ddmendpoints.json
[2024-05-18 17:42:07] drwx------ 4 boinc boinc      4096 May 18 13:59 pilot3
[2024-05-18 17:42:07] -rw------- 1 boinc boinc 315791866 May 18 17:41 HITS.38920982._002573.pool.root.1
[2024-05-18 17:42:07] -rw------- 1 boinc boinc        95 May 18 17:41 pilot_heartbeat.json
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc      8192 May 18 17:41 boinc_mmap_file
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc        28 May 18 17:41 wrapper_checkpoint.txt
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc       531 May 18 17:41 boinc_task_state.xml
[2024-05-18 17:42:07] -rw------- 1 boinc boinc      1051 May 18 17:41 memory_monitor_summary.json
[2024-05-18 17:42:07] -rw------- 1 boinc boinc         0 May 18 17:41 agis_ddmendpoints.agis.ALL.json
[2024-05-18 17:42:07] -rw------- 1 boinc boinc    333662 May 18 17:41 log.38920982._002573.job.log.tgz.1
[2024-05-18 17:42:07] -rw------- 1 boinc boinc      7764 May 18 17:41 heartbeat.json
[2024-05-18 17:42:07] -rw------- 1 boinc boinc      4407 May 18 17:42 pilotlog.txt
[2024-05-18 17:42:07] -rw------- 1 boinc boinc   1507976 May 18 17:42 log.38920982._002573.job.log.1
[2024-05-18 17:42:07] -rw------- 1 boinc boinc       357 May 18 17:42 output.list
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc       620 May 18 17:42 runtime_log
[2024-05-18 17:42:07] -rw------- 1 boinc boinc   1863680 May 18 17:42 result.tar.gz
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc     11410 May 18 17:42 runtime_log.err
[2024-05-18 17:42:07] -rw------- 1 boinc boinc       658 May 18 17:42 Y1fKDm1weR5n7Olcko1bjSoqABFKDmABFKDmOtvXDmC5YKDm2NAvrn.diag
[2024-05-18 17:42:07] -rw-r--r-- 1 boinc boinc     21390 May 18 17:42 stderr.txt
[2024-05-18 17:42:07] HITS file was successfully produced:
[2024-05-18 17:42:07] -rw------- 1 boinc boinc 315791866 May 18 17:41 shared/HITS.pool.root.1
[2024-05-18 17:42:07]  *** Contents of shared directory: ***
[2024-05-18 17:42:07] total 929872
[2024-05-18 17:42:07] -rw-r--r-- 2 boinc boinc 634017480 May 18 13:59 ATLAS.root_0
[2024-05-18 17:42:07] -rw-r--r-- 2 boinc boinc     17537 May 18 13:59 start_atlas.sh
[2024-05-18 17:42:07] -rw-r--r-- 2 boinc boinc    480005 May 18 13:59 input.tar.gz
[2024-05-18 17:42:07] -rw------- 1 boinc boinc 315791866 May 18 17:41 HITS.pool.root.1
[2024-05-18 17:42:07] -rw------- 1 boinc boinc   1863680 May 18 17:42 result.tar.gz
17:42:08 (334038): run_atlas exited; CPU time 50093.735064
17:42:08 (334038): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN