Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
06:27:30 (4536): wrapper (7.7.26015): starting
06:27:30 (4536): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 06:27:30] Arguments: --nthreads 4
[2024-05-16 06:27:30] Threads: 4
[2024-05-16 06:27:30] Checking for CVMFS
[2024-05-16 06:27:35] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 06:27:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 06:27:37] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 06:27:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 06:27:38] 2.11.2.0 4763 0 23600 132786 3 1 2981849 4194305 0 130560 0 0 0.000 1041 1017 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2024-05-16 06:27:38] CVMFS is ok
[2024-05-16 06:27:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 06:27:38] Checking for apptainer binary...
[2024-05-16 06:27:38] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 06:27:38] Running /usr/bin/apptainer --version
[2024-05-16 06:27:40] apptainer version 1.0.3
[2024-05-16 06:27:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 06:27:42] TeeC35
[2024-05-16 06:27:42] apptainer works
[2024-05-16 06:27:42] Set ATHENA_PROC_NUMBER=4
[2024-05-16 06:27:42] Set ATHENA_CORE_NUMBER=4
[2024-05-16 06:27:42] Starting ATLAS job with PandaID=6207035476
[2024-05-16 06:27:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:07:28 (2639): wrapper (7.7.26015): starting
12:07:28 (2639): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 12:07:28] Arguments: --nthreads 4
[2024-05-16 12:07:28] Threads: 4
[2024-05-16 12:07:28] This job has been restarted, cleaning up previous attempt
[2024-05-16 12:07:28] Checking for CVMFS
[2024-05-16 12:07:31] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 12:07:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 12:07:32] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 12:07:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 12:07:32] 2.11.2.0 2869 0 25092 132796 3 1 3208785 4194304 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2024-05-16 12:07:32] CVMFS is ok
[2024-05-16 12:07:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 12:07:32] Checking for apptainer binary...
[2024-05-16 12:07:32] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 12:07:32] Running /usr/bin/apptainer --version
[2024-05-16 12:07:33] apptainer version 1.0.3
[2024-05-16 12:07:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 12:07:34] TeeC35
[2024-05-16 12:07:34] apptainer works
[2024-05-16 12:07:34] Set ATHENA_PROC_NUMBER=4
[2024-05-16 12:07:34] Set ATHENA_CORE_NUMBER=4
[2024-05-16 12:07:34] Starting ATLAS job with PandaID=6207035476
[2024-05-16 12:07:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 19:13:51]  *** The last 200 lines of the pilot log: ***
[2024-05-16 19:13:51] 2024-05-16 18:13:31,288 | INFO     | model: linear, x: [1715857692.0, 1715857753.0, 1715857814.0, 1715857875.0, 1715857936.0, 1715857997.0, 1715858058.0, 1715858119.0, 1715858180.0, 1715858241.0, 1715
[2024-05-16 19:13:51] 2024-05-16 18:13:31,288 | INFO     | sum of square deviations: 22002756581.490192
[2024-05-16 19:13:51] 2024-05-16 18:13:31,296 | INFO     | sum of deviations: 190337567778.93222
[2024-05-16 19:13:51] 2024-05-16 18:13:31,296 | INFO     | mean x: 1715870288.5048308
[2024-05-16 19:13:51] 2024-05-16 18:13:31,296 | INFO     | mean y: 2372093.033816425
[2024-05-16 19:13:51] 2024-05-16 18:13:31,296 | INFO     | -- intersect: -14840976108.74976
[2024-05-16 19:13:51] 2024-05-16 18:13:31,296 | INFO     | intersect: -14840976108.74976
[2024-05-16 19:13:51] 2024-05-16 18:13:31,297 | INFO     | chi2: 4.952082544504642
[2024-05-16 19:13:51] 2024-05-16 18:13:31,297 | INFO     | current chi2=4.952082544504642 (change=12.21599101219322 %)
[2024-05-16 19:13:51] 2024-05-16 18:13:31,297 | INFO     | right removable region: 413
[2024-05-16 19:13:51] 2024-05-16 18:13:31,298 | INFO     | model: linear, x: [1715857997.0, 1715858058.0, 1715858119.0, 1715858180.0, 1715858241.0, 1715858302.0, 1715858363.0, 1715858424.0, 1715858485.0, 1715858546.0, 1715
[2024-05-16 19:13:51] 2024-05-16 18:13:31,298 | INFO     | sum of square deviations: 22002755361.490192
[2024-05-16 19:13:51] 2024-05-16 18:13:31,306 | INFO     | sum of deviations: 65860725347.02168
[2024-05-16 19:13:51] 2024-05-16 18:13:31,306 | INFO     | mean x: 1715870593.5048308
[2024-05-16 19:13:51] 2024-05-16 18:13:31,306 | INFO     | mean y: 2386757.2391304346
[2024-05-16 19:13:51] 2024-05-16 18:13:31,306 | INFO     | -- intersect: -5133719154.643306
[2024-05-16 19:13:51] 2024-05-16 18:13:31,306 | INFO     | intersect: -5133719154.643306
[2024-05-16 19:13:51] 2024-05-16 18:13:31,307 | INFO     | chi2: 3.092534962970291
[2024-05-16 19:13:51] 2024-05-16 18:13:31,307 | INFO     | current chi2=3.092534962970291 (change=45.17960584365694 %)
[2024-05-16 19:13:51] 2024-05-16 18:13:31,307 | INFO     | model: linear, x: [1715858302.0, 1715858363.0, 1715858424.0, 1715858485.0, 1715858546.0, 1715858607.0, 1715858668.0, 1715858729.0, 1715858790.0, 1715858851.0, 1715
[2024-05-16 19:13:51] 2024-05-16 18:13:31,308 | INFO     | sum of square deviations: 21215139983.990345
[2024-05-16 19:13:51] 2024-05-16 18:13:31,315 | INFO     | sum of deviations: -16616013387.26895
[2024-05-16 19:13:51] 2024-05-16 18:13:31,315 | INFO     | mean x: 1715870746.00489
[2024-05-16 19:13:51] 2024-05-16 18:13:31,315 | INFO     | mean y: 2402729.134474328
[2024-05-16 19:13:51] 2024-05-16 18:13:31,315 | INFO     | -- intersect: 1346298235.266214
[2024-05-16 19:13:51] 2024-05-16 18:13:31,316 | INFO     | intersect: 1346298235.266214
[2024-05-16 19:13:51] 2024-05-16 18:13:31,316 | INFO     | chi2: 1.5373674471162384
[2024-05-16 19:13:51] 2024-05-16 18:13:31,316 | INFO     | current chi2=1.5373674471162384 (change=50.28779090537295 %)
[2024-05-16 19:13:51] 2024-05-16 18:13:31,317 | INFO     | model: linear, x: [1715858607.0, 1715858668.0, 1715858729.0, 1715858790.0, 1715858851.0, 1715858912.0, 1715858973.0, 1715859034.0, 1715859095.0, 1715859156.0, 1715
[2024-05-16 19:13:51] 2024-05-16 18:13:31,317 | INFO     | sum of square deviations: 20446548218.98993
[2024-05-16 19:13:51] 2024-05-16 18:13:31,325 | INFO     | sum of deviations: -63338780515.277145
[2024-05-16 19:13:51] 2024-05-16 18:13:31,325 | INFO     | mean x: 1715870898.5049505
[2024-05-16 19:13:51] 2024-05-16 18:13:31,325 | INFO     | mean y: 2411958.3886138615
[2024-05-16 19:13:51] 2024-05-16 18:13:31,325 | INFO     | -- intersect: 5317791799.96098
[2024-05-16 19:13:51] 2024-05-16 18:13:31,325 | INFO     | intersect: 5317791799.96098
[2024-05-16 19:13:51] 2024-05-16 18:13:31,326 | INFO     | chi2: 0.8111011129913922
[2024-05-16 19:13:51] 2024-05-16 18:13:31,326 | INFO     | current chi2=0.8111011129913922 (change=47.240907532363934 %)
[2024-05-16 19:13:51] 2024-05-16 18:13:31,326 | INFO     | model: linear, x: [1715858912.0, 1715858973.0, 1715859034.0, 1715859095.0, 1715859156.0, 1715859217.0, 1715859278.0, 1715859339.0, 1715859400.0, 1715859461.0, 1715
[2024-05-16 19:13:51] 2024-05-16 18:13:31,326 | INFO     | sum of square deviations: 19696747503.98989
[2024-05-16 19:13:51] 2024-05-16 18:13:31,334 | INFO     | sum of deviations: -66551629515.230545
[2024-05-16 19:13:51] 2024-05-16 18:13:31,334 | INFO     | mean x: 1715871051.0050125
[2024-05-16 19:13:51] 2024-05-16 18:13:31,334 | INFO     | mean y: 2412606.1152882203
[2024-05-16 19:13:51] 2024-05-16 18:13:31,334 | INFO     | -- intersect: 5800020280.136749
[2024-05-16 19:13:51] 2024-05-16 18:13:31,334 | INFO     | intersect: 5800020280.136749
[2024-05-16 19:13:51] 2024-05-16 18:13:31,335 | INFO     | chi2: 0.800669154267523
[2024-05-16 19:13:51] 2024-05-16 18:13:31,335 | INFO     | current chi2=0.800669154267523 (change=1.2861477510979398 %)
[2024-05-16 19:13:51] 2024-05-16 18:13:31,335 | INFO     | left removable region: 40
[2024-05-16 19:13:51] 2024-05-16 18:13:31,336 | INFO     | model: linear, x: [1715860132.0, 1715860193.0, 1715860254.0, 1715860315.0, 1715860376.0, 1715860437.0, 1715860498.0, 1715860559.0, 1715860620.0, 1715860681.0, 1715
[2024-05-16 19:13:51] 2024-05-16 18:13:31,336 | INFO     | sum of square deviations: 16091699597.98928
[2024-05-16 19:13:51] 2024-05-16 18:13:31,342 | INFO     | sum of deviations: -21619069706.05631
[2024-05-16 19:13:51] 2024-05-16 18:13:31,342 | INFO     | mean x: 1715871478.005362
[2024-05-16 19:13:51] 2024-05-16 18:13:31,343 | INFO     | mean y: 2413364.5281501343
[2024-05-16 19:13:51] 2024-05-16 18:13:31,343 | INFO     | -- intersect: 2307672971.429277
[2024-05-16 19:13:51] 2024-05-16 18:13:31,343 | INFO     | intersect: 2307672971.429277
[2024-05-16 19:13:51] 2024-05-16 18:13:31,343 | INFO     | chi2: 0.07031725809500625
[2024-05-16 19:13:51] 2024-05-16 18:13:31,343 | INFO     | -- intersect: 2307672971.429277
[2024-05-16 19:13:51] 2024-05-16 18:13:31,344 | INFO     | current memory leak: -1.34 B/s (using 373 data points, chi2=0.07)
[2024-05-16 19:13:51] 2024-05-16 18:13:31,344 | INFO     | ..............................
[2024-05-16 19:13:51] 2024-05-16 18:13:31,344 | INFO     | . Timing measurements:
[2024-05-16 19:13:51] 2024-05-16 18:13:31,344 | INFO     | . get job = 0 s
[2024-05-16 19:13:51] 2024-05-16 18:13:31,344 | INFO     | . initial setup = 1 s
[2024-05-16 19:13:51] 2024-05-16 18:13:31,344 | INFO     | . payload setup = 7 s
[2024-05-16 19:13:51] 2024-05-16 18:13:31,344 | INFO     | . stage-in = 0 s
[2024-05-16 19:13:51] 2024-05-16 18:13:31,345 | INFO     | . payload execution = 25510 s
[2024-05-16 19:13:51] 2024-05-16 18:13:31,345 | INFO     | . stage-out = 1 s
[2024-05-16 19:13:51] 2024-05-16 18:13:31,345 | INFO     | . log creation = 0 s
[2024-05-16 19:13:51] 2024-05-16 18:13:31,345 | INFO     | ..............................
[2024-05-16 19:13:51] 2024-05-16 18:13:31,448 | INFO     | 
[2024-05-16 19:13:51] 2024-05-16 18:13:31,448 | INFO     | job summary report
[2024-05-16 19:13:51] 2024-05-16 18:13:31,448 | INFO     | --------------------------------------------------
[2024-05-16 19:13:51] 2024-05-16 18:13:31,448 | INFO     | PanDA job id: 6207035476
[2024-05-16 19:13:51] 2024-05-16 18:13:31,448 | INFO     | task id: 38920987
[2024-05-16 19:13:51] 2024-05-16 18:13:31,448 | INFO     | errors: (none)
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | pilot state: finished 
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | transexitcode: 0
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | exeerrorcode: 0
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | exeerrordiag: 
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | exitcode: 0
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | exitmsg: OK
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | cpuconsumptiontime: 97025 s
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | nevents: 400
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | neventsw: 0
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | pid: 13884
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | pgrp: 13884
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | corecount: 4
[2024-05-16 19:13:51] 2024-05-16 18:13:31,449 | INFO     | event service: False
[2024-05-16 19:13:51] 2024-05-16 18:13:31,450 | INFO     | sizes: {0: 2391953, 1: 2392152, 3: 2392358, 12: 2392386, 25521: 2428344, 25523: 2437302, 25525: 2437486, 25530: 2437656}
[2024-05-16 19:13:51] 2024-05-16 18:13:31,450 | INFO     | --------------------------------------------------
[2024-05-16 19:13:51] 2024-05-16 18:13:31,450 | INFO     | 
[2024-05-16 19:13:51] 2024-05-16 18:13:31,450 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2024-05-16 19:13:51] 2024-05-16 18:13:31,459 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,460 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,460 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,460 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,461 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,461 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 19:13:51] 2024-05-16 18:13:31,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,461 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 19:13:51] 2024-05-16 18:13:31,461 | INFO     | job 6207035476 has completed (purged errors)
[2024-05-16 19:13:51] 2024-05-16 18:13:31,461 | INFO     | overall cleanup function is called
[2024-05-16 19:13:51] 2024-05-16 18:13:32,468 | INFO     | --- collectZombieJob: --- 10, [13884]
[2024-05-16 19:13:51] 2024-05-16 18:13:32,468 | INFO     | zombie collector waiting for pid 13884
[2024-05-16 19:13:51] 2024-05-16 18:13:32,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 19:13:51] 2024-05-16 18:13:33,474 | INFO     | collected zombie processes
[2024-05-16 19:13:51] 2024-05-16 18:13:33,475 | INFO     | will now attempt to kill all subprocesses of pid=13884
[2024-05-16 19:13:51] 2024-05-16 18:13:33,521 | INFO     | process IDs to be killed: [13884] (in reverse order)
[2024-05-16 19:13:51] 2024-05-16 18:13:33,550 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 19:13:51] 2024-05-16 18:13:33,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 19:13:51] 2024-05-16 18:13:33,552 | INFO     | did not find any defunct processes belonging to 13884
[2024-05-16 19:13:51] 2024-05-16 18:13:33,554 | INFO     | did not find any defunct processes belonging to 13884
[2024-05-16 19:13:51] 2024-05-16 18:13:33,554 | INFO     | ready for new job
[2024-05-16 19:13:51] 2024-05-16 18:13:33,555 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 19:13:51] 2024-05-16 18:13:33,556 | INFO     | *************************************
[2024-05-16 19:13:51] 2024-05-16 18:13:33,556 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 19:13:51] 2024-05-16 18:13:33,556 | INFO     | *************************************
[2024-05-16 19:13:51] 2024-05-16 18:13:33,556 | INFO     | 
[2024-05-16 19:13:51] 2024-05-16 18:13:33,575 | INFO     | architecture information:
[2024-05-16 19:13:51] 2024-05-16 18:13:33,576 | INFO     | executing command: cat /etc/os-release
[2024-05-16 19:13:51] 2024-05-16 18:13:33,586 | INFO     | cat /etc/os-release:
[2024-05-16 19:13:51] NAME="CentOS Linux"
[2024-05-16 19:13:51] VERSION="7 (Core)"
[2024-05-16 19:13:51] ID="centos"
[2024-05-16 19:13:51] ID_LIKE="rhel fedora"
[2024-05-16 19:13:51] VERSION_ID="7"
[2024-05-16 19:13:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 19:13:51] ANSI_COLOR="0;31"
[2024-05-16 19:13:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 19:13:51] HOME_URL="https://www.centos.org/"
[2024-05-16 19:13:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 19:13:51] 
[2024-05-16 19:13:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 19:13:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 19:13:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 19:13:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 19:13:51] 
[2024-05-16 19:13:51] 2024-05-16 18:13:33,586 | INFO     | *************************************
[2024-05-16 19:13:51] 2024-05-16 18:13:34,090 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2024-05-16 19:13:51] 2024-05-16 18:13:34,101 | INFO     | sufficient remaining disk space (432299573248 B)
[2024-05-16 19:13:51] 2024-05-16 18:13:34,101 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 19:13:51] 2024-05-16 18:13:34,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 19:13:51] 2024-05-16 18:13:34,256 | INFO     | all job control threads have been joined
[2024-05-16 19:13:51] 2024-05-16 18:13:34,372 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-16 19:13:51] 2024-05-16 18:13:34,373 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-16 19:13:51] 2024-05-16 18:13:34,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 19:13:51] 2024-05-16 18:13:34,374 | INFO     | will abort loop
[2024-05-16 19:13:51] 2024-05-16 18:13:34,749 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 19:13:51] 2024-05-16 18:13:34,755 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 19:13:51] 2024-05-16 18:13:34,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 19:13:51] 2024-05-16 18:13:34,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 19:13:51] 2024-05-16 18:13:34,946 | INFO     | all data control threads have been joined
[2024-05-16 19:13:51] 2024-05-16 18:13:35,107 | INFO     | [job] retrieve thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:35,191 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:35,263 | INFO     | [job] control thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:35,344 | INFO     | [payload] failed_post thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:35,346 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:35,380 | INFO     | [job] job monitor thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:35,452 | INFO     | all payload control threads have been joined
[2024-05-16 19:13:51] 2024-05-16 18:13:35,952 | INFO     | [data] control thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:36,083 | INFO     | [payload] validate_post thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:36,125 | INFO     | [data] copytool_in thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:36,335 | INFO     | [job] validate thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:36,458 | INFO     | [payload] control thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:36,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 19:13:51] 2024-05-16 18:13:36,570 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:36,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 19:13:51] 2024-05-16 18:13:36,755 | INFO     | [data] copytool_out thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:37,466 | INFO     | [job] queue monitor thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:40,740 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:45,068 | INFO     | job.realtimelogging is not enabled
[2024-05-16 19:13:51] 2024-05-16 18:13:46,074 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 19:13:51] 2024-05-16 18:13:46,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140306031159104)>', '<ExcThread(monitor, started 140305726674688)>']
[2024-05-16 19:13:51] 2024-05-16 18:13:46,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 19:13:51] 2024-05-16 18:13:46,820 | INFO     | [monitor] control thread has ended
[2024-05-16 19:13:51] 2024-05-16 18:13:51,231 | INFO     | all workflow threads have been joined
[2024-05-16 19:13:51] 2024-05-16 18:13:51,232 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 19:13:51] 2024-05-16 18:13:51,233 | INFO     | traces error code: 0
[2024-05-16 19:13:51] 2024-05-16 18:13:51,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 19:13:51] 2024-05-16 18:13:51,301 [wrapper] ==== pilot stdout END ====
[2024-05-16 19:13:51] 2024-05-16 18:13:51,302 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 19:13:51] 2024-05-16 18:13:51,304 [wrapper] pilotpid: 7432
[2024-05-16 19:13:51] 2024-05-16 18:13:51,306 [wrapper] Pilot exit status: 0
[2024-05-16 19:13:51] 2024-05-16 18:13:51,330 [wrapper] pandaids: 6207035476 6207035476
[2024-05-16 19:13:51] 2024-05-16 18:13:51,347 [wrapper] cleanup: SIGTERM to supervisor_pilot 25263 7433
[2024-05-16 19:13:51] 2024-05-16 18:13:51,348 [wrapper] Test setup, not cleaning
[2024-05-16 19:13:51] 2024-05-16 18:13:51,350 [wrapper] ==== wrapper stdout END ====
[2024-05-16 19:13:51] 2024-05-16 18:13:51,352 [wrapper] ==== wrapper stderr END ====
[2024-05-16 19:13:51] 2024-05-16 18:13:51,356 [wrapper] apfmon messages muted
[2024-05-16 19:13:51]  *** Error codes and diagnostics ***
[2024-05-16 19:13:51]     "exeErrorCode": 0,
[2024-05-16 19:13:51]     "exeErrorDiag": "",
[2024-05-16 19:13:51]     "pilotErrorCode": 0,
[2024-05-16 19:13:51]     "pilotErrorDiag": "",
[2024-05-16 19:13:51]  *** Listing of results directory ***
[2024-05-16 19:13:51] total 1589328
[2024-05-16 19:13:51] drwx------ 4 m m      4096 May  8 13:24 pilot3
[2024-05-16 19:13:51] -rw-r--r-- 1 m m    467845 May 16 00:48 pilot3.tar.gz
[2024-05-16 19:13:51] -rw-r--r-- 1 m m      5633 May 16 00:54 queuedata.json
[2024-05-16 19:13:51] -rwx------ 1 m m     32251 May 16 00:54 runpilot2-wrapper.sh
[2024-05-16 19:13:51] -rw-rw-r-- 1 m m       100 May 16 06:27 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 19:13:51] -rwxr-xr-x 1 m m      7986 May 16 06:27 run_atlas
[2024-05-16 19:13:51] -rw-rw-r-- 1 m m       105 May 16 06:27 job.xml
[2024-05-16 19:13:51] -rw-r--r-- 2 m m     17537 May 16 06:27 start_atlas.sh
[2024-05-16 19:13:51] drwxrwx--x 2 m m      4096 May 16 06:27 shared
[2024-05-16 19:13:51] -rw-r--r-- 2 m m    479998 May 16 06:27 input.tar.gz
[2024-05-16 19:13:51] -rw-r--r-- 3 m m 638146578 May 16 06:27 EVNT.38776170._000044.pool.root.1
[2024-05-16 19:13:51] -rw-r--r-- 3 m m 638146578 May 16 06:27 ATLAS.root_0
[2024-05-16 19:13:51] -rw-rw-r-- 1 m m         0 May 16 06:27 boinc_lockfile
[2024-05-16 19:13:51] -rw------- 1 m m   1324701 May 16 06:28 cric_ddmendpoints.json
[2024-05-16 19:13:51] -rw-rw-r-- 1 m m      2615 May 16 12:07 pandaJob.out
[2024-05-16 19:13:51] -rw------- 1 m m       424 May 16 12:07 setup.sh.local
[2024-05-16 19:13:51] -rw------- 1 m m   1010327 May 16 12:07 agis_schedconf.cvmfs.json
[2024-05-16 19:13:51] -rw-rw-r-- 1 m m      6022 May 16 14:58 init_data.xml
[2024-05-16 19:13:51] -rw------- 1 m m 340864118 May 16 19:12 HITS.38920987._001092.pool.root.1
[2024-05-16 19:13:51] -rw-rw-r-- 1 m m       532 May 16 19:12 boinc_task_state.xml
[2024-05-16 19:13:51] -rw------- 1 m m        96 May 16 19:12 pilot_heartbeat.json
[2024-05-16 19:13:51] -rw------- 1 m m      1034 May 16 19:13 memory_monitor_summary.json
[2024-05-16 19:13:51] -rw------- 1 m m         0 May 16 19:13 agis_ddmendpoints.agis.ALL.json
[2024-05-16 19:13:51] -rw------- 1 m m    474860 May 16 19:13 log.38920987._001092.job.log.tgz.1
[2024-05-16 19:13:51] -rw------- 1 m m      7700 May 16 19:13 heartbeat.json
[2024-05-16 19:13:51] -rw-rw-r-- 1 m m      8192 May 16 19:13 boinc_mmap_file
[2024-05-16 19:13:51] -rw-rw-r-- 1 m m        29 May 16 19:13 wrapper_checkpoint.txt
[2024-05-16 19:13:51] -rw------- 1 m m      4469 May 16 19:13 pilotlog.txt
[2024-05-16 19:13:51] -rw------- 1 m m   2917750 May 16 19:13 log.38920987._001092.job.log.1
[2024-05-16 19:13:51] -rw------- 1 m m       357 May 16 19:13 output.list
[2024-05-16 19:13:51] -rw-rw-r-- 1 m m       620 May 16 19:13 runtime_log
[2024-05-16 19:13:51] -rw------- 1 m m   3409920 May 16 19:13 result.tar.gz
[2024-05-16 19:13:51] -rw-rw-r-- 1 m m     10987 May 16 19:13 runtime_log.err
[2024-05-16 19:13:51] -rw------- 1 m m       747 May 16 19:13 FiJKDmZddR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm4wJKDm5jv3xm.diag
[2024-05-16 19:13:51] -rw-rw-r-- 1 m m     23075 May 16 19:13 stderr.txt
[2024-05-16 19:13:51] HITS file was successfully produced:
[2024-05-16 19:13:51] -rw------- 1 m m 340864118 May 16 19:12 shared/HITS.pool.root.1
[2024-05-16 19:13:51]  *** Contents of shared directory: ***
[2024-05-16 19:13:51] total 959900
[2024-05-16 19:13:51] -rw-r--r-- 2 m m     17537 May 16 06:27 start_atlas.sh
[2024-05-16 19:13:51] -rw-r--r-- 2 m m    479998 May 16 06:27 input.tar.gz
[2024-05-16 19:13:51] -rw-r--r-- 3 m m 638146578 May 16 06:27 ATLAS.root_0
[2024-05-16 19:13:51] -rw------- 1 m m 340864118 May 16 19:12 HITS.pool.root.1
[2024-05-16 19:13:51] -rw------- 1 m m   3409920 May 16 19:13 result.tar.gz
19:13:52 (2639): run_atlas exited; CPU time 96967.887815
19:13:52 (2639): called boinc_finish(0)

</stderr_txt>
]]>

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