Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:31:45 (3781613): wrapper (7.7.26015): starting
17:31:45 (3781613): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 17:31:45] Arguments: --nthreads 4
[2024-05-19 17:31:45] Threads: 4
[2024-05-19 17:31:45] Checking for CVMFS
[2024-05-19 17:31:45] No cvmfs_config command found, will try listing directly
[2024-05-19 17:31:45] CVMFS is ok
[2024-05-19 17:31:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 17:31:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 17:31:45] Further information can be found at the LHC@home message board.
[2024-05-19 17:31:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 17:31:45] Checking for apptainer binary...
[2024-05-19 17:31:45] which: no apptainer in ((null))
[2024-05-19 17:31:45] apptainer is not installed, using version from CVMFS
[2024-05-19 17:31:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 17:31:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-19 17:31:46] apptainer works
[2024-05-19 17:31:46] Set ATHENA_PROC_NUMBER=4
[2024-05-19 17:31:46] Set ATHENA_CORE_NUMBER=4
[2024-05-19 17:31:46] Starting ATLAS job with PandaID=6207035115
[2024-05-19 17:31:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 19:42:44]  *** The last 200 lines of the pilot log: ***
[2024-05-19 19:42:44] 2024-05-19 17:42:22,397 | INFO     | chi2: 3.5807034678117713
[2024-05-19 19:42:44] 2024-05-19 17:42:22,397 | INFO     | current chi2=3.5807034678117713 (change=-0.12374731526416576 %)
[2024-05-19 19:42:44] 2024-05-19 17:42:22,397 | INFO     | right removable region: 122
[2024-05-19 19:42:44] 2024-05-19 17:42:22,397 | INFO     | model: linear, x: [1716133043.0, 1716133104.0, 1716133165.0, 1716133226.0, 1716133287.0, 1716133348.0, 1716133409.0, 1716133470.0, 1716133531.0, 1716133592.0, 1716
[2024-05-19 19:42:44] 2024-05-19 17:42:22,398 | INFO     | sum of square deviations: 576985702.0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,398 | INFO     | sum of deviations: 7303864463.000001
[2024-05-19 19:42:44] 2024-05-19 17:42:22,398 | INFO     | mean x: 1716136764.0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,398 | INFO     | mean y: 2342405.349593496
[2024-05-19 19:42:44] 2024-05-19 17:42:22,398 | INFO     | -- intersect: -21721645348.21075
[2024-05-19 19:42:44] 2024-05-19 17:42:22,398 | INFO     | intersect: -21721645348.21075
[2024-05-19 19:42:44] 2024-05-19 17:42:22,398 | INFO     | chi2: 1.295047406055044
[2024-05-19 19:42:44] 2024-05-19 17:42:22,398 | INFO     | current chi2=1.295047406055044 (change=63.78784213472331 %)
[2024-05-19 19:42:44] 2024-05-19 17:42:22,398 | INFO     | model: linear, x: [1716133348.0, 1716133409.0, 1716133470.0, 1716133531.0, 1716133592.0, 1716133653.0, 1716133714.0, 1716133775.0, 1716133836.0, 1716133897.0, 1716
[2024-05-19 19:42:44] 2024-05-19 17:42:22,398 | INFO     | sum of square deviations: 509440249.5
[2024-05-19 19:42:44] 2024-05-19 17:42:22,399 | INFO     | sum of deviations: -12947521663.499989
[2024-05-19 19:42:44] 2024-05-19 17:42:22,399 | INFO     | mean x: 1716136916.5
[2024-05-19 19:42:44] 2024-05-19 17:42:22,399 | INFO     | mean y: 2388143.161016949
[2024-05-19 19:42:44] 2024-05-19 17:42:22,399 | INFO     | -- intersect: 43618337070.87884
[2024-05-19 19:42:44] 2024-05-19 17:42:22,399 | INFO     | intersect: 43618337070.87884
[2024-05-19 19:42:44] 2024-05-19 17:42:22,399 | INFO     | chi2: 0.09027539540640953
[2024-05-19 19:42:44] 2024-05-19 17:42:22,399 | INFO     | current chi2=0.09027539540640953 (change=93.02918217631854 %)
[2024-05-19 19:42:44] 2024-05-19 17:42:22,399 | INFO     | model: linear, x: [1716133653.0, 1716133714.0, 1716133775.0, 1716133836.0, 1716133897.0, 1716133958.0, 1716134019.0, 1716134080.0, 1716134141.0, 1716134202.0, 1716
[2024-05-19 19:42:44] 2024-05-19 17:42:22,399 | INFO     | sum of square deviations: 447383272.0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,400 | INFO     | sum of deviations: -12263148786.0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,400 | INFO     | mean x: 1716137069.0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,400 | INFO     | mean y: 2386278.681415929
[2024-05-19 19:42:44] 2024-05-19 17:42:22,400 | INFO     | -- intersect: 47043135299.61698
[2024-05-19 19:42:44] 2024-05-19 17:42:22,400 | INFO     | intersect: 47043135299.61698
[2024-05-19 19:42:44] 2024-05-19 17:42:22,400 | INFO     | chi2: 0.05605007659335
[2024-05-19 19:42:44] 2024-05-19 17:42:22,400 | INFO     | current chi2=0.05605007659335 (change=37.91212285360928 %)
[2024-05-19 19:42:44] 2024-05-19 17:42:22,400 | INFO     | model: linear, x: [1716133958.0, 1716134019.0, 1716134080.0, 1716134141.0, 1716134202.0, 1716134263.0, 1716134324.0, 1716134385.0, 1716134446.0, 1716134507.0, 1716
[2024-05-19 19:42:44] 2024-05-19 17:42:22,400 | INFO     | sum of square deviations: 390582207.0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,400 | INFO     | sum of deviations: -8454028887.5
[2024-05-19 19:42:44] 2024-05-19 17:42:22,400 | INFO     | mean x: 1716137221.5
[2024-05-19 19:42:44] 2024-05-19 17:42:22,400 | INFO     | mean y: 2376037.564814815
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | -- intersect: 37147625835.06771
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | intersect: 37147625835.06771
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | chi2: 0.03902486778545776
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | current chi2=0.03902486778545776 (change=30.374996507876634 %)
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | model: linear, x: [1716134263.0, 1716134324.0, 1716134385.0, 1716134446.0, 1716134507.0, 1716134568.0, 1716134629.0, 1716134690.0, 1716134751.0, 1716134812.0, 1716
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | sum of square deviations: 338804492.0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | sum of deviations: -6012650867.0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | mean x: 1716137374.0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | mean y: 2368899.8834951455
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | -- intersect: 30458089273.48528
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | intersect: 30458089273.48528
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | chi2: 0.030566521490345132
[2024-05-19 19:42:44] 2024-05-19 17:42:22,401 | INFO     | current chi2=0.030566521490345132 (change=21.674247153412647 %)
[2024-05-19 19:42:44] 2024-05-19 17:42:22,402 | INFO     | left removable region: 50
[2024-05-19 19:42:44] 2024-05-19 17:42:22,402 | INFO     | model: linear, x: [1716135788.0, 1716135849.0, 1716135910.0, 1716135971.0, 1716136032.0, 1716136093.0, 1716136154.0, 1716136215.0, 1716136276.0, 1716136337.0, 1716
[2024-05-19 19:42:44] 2024-05-19 17:42:22,402 | INFO     | sum of square deviations: 115715658.0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,402 | INFO     | sum of deviations: 232740986.0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,402 | INFO     | mean x: 1716137953.5
[2024-05-19 19:42:44] 2024-05-19 17:42:22,402 | INFO     | mean y: 2345292.138888889
[2024-05-19 19:42:44] 2024-05-19 17:42:22,402 | INFO     | -- intersect: -3449353866.9292135
[2024-05-19 19:42:44] 2024-05-19 17:42:22,402 | INFO     | intersect: -3449353866.9292135
[2024-05-19 19:42:44] 2024-05-19 17:42:22,402 | INFO     | chi2: 2.087175348653368e-05
[2024-05-19 19:42:44] 2024-05-19 17:42:22,402 | INFO     | -- intersect: -3449353866.9292135
[2024-05-19 19:42:44] 2024-05-19 17:42:22,402 | INFO     | current memory leak: 2.01 B/s (using 72 data points, chi2=0.00)
[2024-05-19 19:42:44] 2024-05-19 17:42:22,403 | INFO     | ..............................
[2024-05-19 19:42:44] 2024-05-19 17:42:22,403 | INFO     | . Timing measurements:
[2024-05-19 19:42:44] 2024-05-19 17:42:22,403 | INFO     | . get job = 0 s
[2024-05-19 19:42:44] 2024-05-19 17:42:22,403 | INFO     | . initial setup = 1 s
[2024-05-19 19:42:44] 2024-05-19 17:42:22,403 | INFO     | . payload setup = 4 s
[2024-05-19 19:42:44] 2024-05-19 17:42:22,403 | INFO     | . stage-in = 0 s
[2024-05-19 19:42:44] 2024-05-19 17:42:22,403 | INFO     | . payload execution = 7797 s
[2024-05-19 19:42:44] 2024-05-19 17:42:22,403 | INFO     | . stage-out = 0 s
[2024-05-19 19:42:44] 2024-05-19 17:42:22,403 | INFO     | . log creation = 0 s
[2024-05-19 19:42:44] 2024-05-19 17:42:22,403 | INFO     | ..............................
[2024-05-19 19:42:44] 2024-05-19 17:42:22,836 | INFO     | 
[2024-05-19 19:42:44] 2024-05-19 17:42:22,836 | INFO     | job summary report
[2024-05-19 19:42:44] 2024-05-19 17:42:22,836 | INFO     | --------------------------------------------------
[2024-05-19 19:42:44] 2024-05-19 17:42:22,836 | INFO     | PanDA job id: 6207035115
[2024-05-19 19:42:44] 2024-05-19 17:42:22,836 | INFO     | task id: 38776104
[2024-05-19 19:42:44] 2024-05-19 17:42:22,836 | INFO     | errors: (none)
[2024-05-19 19:42:44] 2024-05-19 17:42:22,836 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 19:42:44] 2024-05-19 17:42:22,836 | INFO     | pilot state: finished 
[2024-05-19 19:42:44] 2024-05-19 17:42:22,836 | INFO     | transexitcode: 0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,836 | INFO     | exeerrorcode: 0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,837 | INFO     | exeerrordiag: 
[2024-05-19 19:42:44] 2024-05-19 17:42:22,837 | INFO     | exitcode: 0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,837 | INFO     | exitmsg: OK
[2024-05-19 19:42:44] 2024-05-19 17:42:22,837 | INFO     | cpuconsumptiontime: 28427 s
[2024-05-19 19:42:44] 2024-05-19 17:42:22,837 | INFO     | nevents: 400
[2024-05-19 19:42:44] 2024-05-19 17:42:22,837 | INFO     | neventsw: 0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,837 | INFO     | pid: 3792973
[2024-05-19 19:42:44] 2024-05-19 17:42:22,837 | INFO     | pgrp: 3792973
[2024-05-19 19:42:44] 2024-05-19 17:42:22,837 | INFO     | corecount: 4
[2024-05-19 19:42:44] 2024-05-19 17:42:22,837 | INFO     | event service: False
[2024-05-19 19:42:44] 2024-05-19 17:42:22,837 | INFO     | sizes: {0: 2392212, 4: 2392418, 11: 2392446, 7806: 2420114, 7807: 2429096, 7810: 2429152, 7813: 2429450}
[2024-05-19 19:42:44] 2024-05-19 17:42:22,837 | INFO     | --------------------------------------------------
[2024-05-19 19:42:44] 2024-05-19 17:42:22,838 | INFO     | 
[2024-05-19 19:42:44] 2024-05-19 17:42:22,838 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,866 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 19:42:44] 2024-05-19 17:42:22,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,866 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 19:42:44] 2024-05-19 17:42:22,866 | INFO     | job 6207035115 has completed (purged errors)
[2024-05-19 19:42:44] 2024-05-19 17:42:22,866 | INFO     | overall cleanup function is called
[2024-05-19 19:42:44] 2024-05-19 17:42:23,873 | INFO     | --- collectZombieJob: --- 10, [3792973]
[2024-05-19 19:42:44] 2024-05-19 17:42:23,873 | INFO     | zombie collector waiting for pid 3792973
[2024-05-19 19:42:44] 2024-05-19 17:42:23,874 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 19:42:44] 2024-05-19 17:42:24,879 | INFO     | collected zombie processes
[2024-05-19 19:42:44] 2024-05-19 17:42:24,879 | INFO     | will now attempt to kill all subprocesses of pid=3792973
[2024-05-19 19:42:44] 2024-05-19 17:42:25,047 | INFO     | process IDs to be killed: [3792973] (in reverse order)
[2024-05-19 19:42:44] 2024-05-19 17:42:25,164 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 19:42:44] 2024-05-19 17:42:25,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 19:42:44] 2024-05-19 17:42:25,172 | INFO     | did not find any defunct processes belonging to 3792973
[2024-05-19 19:42:44] 2024-05-19 17:42:25,178 | INFO     | did not find any defunct processes belonging to 3792973
[2024-05-19 19:42:44] 2024-05-19 17:42:25,179 | INFO     | ready for new job
[2024-05-19 19:42:44] 2024-05-19 17:42:25,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 19:42:44] 2024-05-19 17:42:25,180 | INFO     | *************************************
[2024-05-19 19:42:44] 2024-05-19 17:42:25,180 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 19:42:44] 2024-05-19 17:42:25,180 | INFO     | *************************************
[2024-05-19 19:42:44] 2024-05-19 17:42:25,180 | INFO     | 
[2024-05-19 19:42:44] 2024-05-19 17:42:25,183 | INFO     | architecture information:
[2024-05-19 19:42:44] 2024-05-19 17:42:25,183 | INFO     | executing command: cat /etc/os-release
[2024-05-19 19:42:44] 2024-05-19 17:42:25,199 | INFO     | cat /etc/os-release:
[2024-05-19 19:42:44] NAME="CentOS Linux"
[2024-05-19 19:42:44] VERSION="7 (Core)"
[2024-05-19 19:42:44] ID="centos"
[2024-05-19 19:42:44] ID_LIKE="rhel fedora"
[2024-05-19 19:42:44] VERSION_ID="7"
[2024-05-19 19:42:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 19:42:44] ANSI_COLOR="0;31"
[2024-05-19 19:42:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 19:42:44] HOME_URL="https://www.centos.org/"
[2024-05-19 19:42:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 19:42:44] 
[2024-05-19 19:42:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 19:42:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 19:42:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 19:42:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 19:42:44] 
[2024-05-19 19:42:44] 2024-05-19 17:42:25,200 | INFO     | *************************************
[2024-05-19 19:42:44] 2024-05-19 17:42:25,702 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2024-05-19 19:42:44] 2024-05-19 17:42:25,722 | INFO     | sufficient remaining disk space (583158202368 B)
[2024-05-19 19:42:44] 2024-05-19 17:42:25,723 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 19:42:44] 2024-05-19 17:42:25,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 19:42:44] 2024-05-19 17:42:25,723 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 19:42:44] 2024-05-19 17:42:25,723 | INFO     | aborting loop
[2024-05-19 19:42:44] 2024-05-19 17:42:25,756 | INFO     | all data control threads have been joined
[2024-05-19 19:42:44] 2024-05-19 17:42:25,891 | INFO     | all job control threads have been joined
[2024-05-19 19:42:44] 2024-05-19 17:42:25,957 | INFO     | all payload control threads have been joined
[2024-05-19 19:42:44] 2024-05-19 17:42:26,118 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 19:42:44] 2024-05-19 17:42:26,249 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 19:42:44] 2024-05-19 17:42:26,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 19:42:44] 2024-05-19 17:42:26,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 19:42:44] 2024-05-19 17:42:26,728 | INFO     | [job] retrieve thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:26,728 | INFO     | [job] job monitor thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:26,761 | INFO     | [data] control thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:26,819 | INFO     | [job] validate thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:26,896 | INFO     | [job] control thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:26,962 | INFO     | [payload] control thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:27,101 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:27,120 | INFO     | [payload] validate_post thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:27,307 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:27,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 19:42:44] 2024-05-19 17:42:27,793 | INFO     | [data] copytool_in thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:27,836 | INFO     | [payload] failed_post thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:27,859 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:28,124 | INFO     | [data] copytool_out thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:28,483 | INFO     | [job] queue monitor thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:29,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 19:42:44] 2024-05-19 17:42:33,147 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:35,948 | INFO     | job.realtimelogging is not enabled
[2024-05-19 19:42:44] 2024-05-19 17:42:36,954 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 19:42:44] 2024-05-19 17:42:38,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47833280160832)>', '<ExcThread(monitor, started 47833451411200)>']
[2024-05-19 19:42:44] 2024-05-19 17:42:39,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 19:42:44] 2024-05-19 17:42:39,310 | INFO     | [monitor] control thread has ended
[2024-05-19 19:42:44] 2024-05-19 17:42:43,422 | INFO     | all workflow threads have been joined
[2024-05-19 19:42:44] 2024-05-19 17:42:43,423 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 19:42:44] 2024-05-19 17:42:43,423 | INFO     | traces error code: 0
[2024-05-19 19:42:44] 2024-05-19 17:42:43,423 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 19:42:44] 2024-05-19 17:42:43,504 [wrapper] ==== pilot stdout END ====
[2024-05-19 19:42:44] 2024-05-19 17:42:43,507 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 19:42:44] 2024-05-19 17:42:43,509 [wrapper] pilotpid: 3785929
[2024-05-19 19:42:44] 2024-05-19 17:42:43,511 [wrapper] Pilot exit status: 0
[2024-05-19 19:42:44] 2024-05-19 17:42:43,518 [wrapper] pandaids: 6207035115
[2024-05-19 19:42:44] 2024-05-19 17:42:43,579 [wrapper] cleanup: SIGTERM to supervisor_pilot 4053641 3785930
[2024-05-19 19:42:44] 2024-05-19 17:42:43,581 [wrapper] Test setup, not cleaning
[2024-05-19 19:42:44] 2024-05-19 17:42:43,583 [wrapper] ==== wrapper stdout END ====
[2024-05-19 19:42:44] 2024-05-19 17:42:43,586 [wrapper] ==== wrapper stderr END ====
[2024-05-19 19:42:44] 2024-05-19 17:42:43,590 [wrapper] apfmon messages muted
[2024-05-19 19:42:44]  *** Error codes and diagnostics ***
[2024-05-19 19:42:44]     "exeErrorCode": 0,
[2024-05-19 19:42:44]     "exeErrorDiag": "",
[2024-05-19 19:42:44]     "pilotErrorCode": 0,
[2024-05-19 19:42:44]     "pilotErrorDiag": "",
[2024-05-19 19:42:44]  *** Listing of results directory ***
[2024-05-19 19:42:44] total 824880
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc    467845 May 16 01:18 pilot3.tar.gz
[2024-05-19 19:42:44] -rwx------ 1 boinc boinc     32251 May 16 01:24 runpilot2-wrapper.sh
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc      5633 May 16 01:24 queuedata.json
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc       100 May 19 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 19:42:44] -rwxr-xr-x 1 boinc boinc      7986 May 19 17:31 run_atlas
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc       105 May 19 17:31 job.xml
[2024-05-19 19:42:44] -rw-r--r-- 2 boinc boinc 603716825 May 19 17:31 EVNT.38776100._000352.pool.root.1
[2024-05-19 19:42:44] -rw-r--r-- 2 boinc boinc     17537 May 19 17:31 start_atlas.sh
[2024-05-19 19:42:44] drwxrwx--x 2 boinc boinc      4096 May 19 17:31 shared
[2024-05-19 19:42:44] -rw-r--r-- 2 boinc boinc    480006 May 19 17:31 input.tar.gz
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc      6663 May 19 17:31 init_data.xml
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc         0 May 19 17:31 boinc_lockfile
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc      2640 May 19 17:31 pandaJob.out
[2024-05-19 19:42:44] -rw------- 1 boinc boinc       424 May 19 17:31 setup.sh.local
[2024-05-19 19:42:44] -rw------- 1 boinc boinc   1014053 May 19 17:31 agis_schedconf.cvmfs.json
[2024-05-19 19:42:44] -rw------- 1 boinc boinc         0 May 19 17:31 agis_ddmendpoints.agis.ALL.json
[2024-05-19 19:42:44] -rw------- 1 boinc boinc   1324701 May 19 17:31 cric_ddmendpoints.json
[2024-05-19 19:42:44] drwx------ 4 boinc boinc      4096 May 19 17:31 pilot3
[2024-05-19 19:42:44] -rw------- 1 boinc boinc 235215916 May 19 19:41 HITS.38776104._008803.pool.root.1
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc       530 May 19 19:41 boinc_task_state.xml
[2024-05-19 19:42:44] -rw------- 1 boinc boinc      1045 May 19 19:42 memory_monitor_summary.json
[2024-05-19 19:42:44] -rw------- 1 boinc boinc        95 May 19 19:42 pilot_heartbeat.json
[2024-05-19 19:42:44] -rw------- 1 boinc boinc    283990 May 19 19:42 log.38776104._008803.job.log.tgz.1
[2024-05-19 19:42:44] -rw------- 1 boinc boinc      7760 May 19 19:42 heartbeat.json
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc      8192 May 19 19:42 boinc_mmap_file
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc        27 May 19 19:42 wrapper_checkpoint.txt
[2024-05-19 19:42:44] -rw------- 1 boinc boinc      4293 May 19 19:42 pilotlog.txt
[2024-05-19 19:42:44] -rw------- 1 boinc boinc    826125 May 19 19:42 log.38776104._008803.job.log.1
[2024-05-19 19:42:44] -rw------- 1 boinc boinc       357 May 19 19:42 output.list
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc       620 May 19 19:42 runtime_log
[2024-05-19 19:42:44] -rw------- 1 boinc boinc   1126400 May 19 19:42 result.tar.gz
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc     11409 May 19 19:42 runtime_log.err
[2024-05-19 19:42:44] -rw------- 1 boinc boinc       654 May 19 19:42 QRRLDmu9cR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmMwJKDmmKIxnm.diag
[2024-05-19 19:42:44] -rw-r--r-- 1 boinc boinc     21300 May 19 19:42 stderr.txt
[2024-05-19 19:42:44] HITS file was successfully produced:
[2024-05-19 19:42:44] -rw------- 1 boinc boinc 235215916 May 19 19:41 shared/HITS.pool.root.1
[2024-05-19 19:42:44]  *** Contents of shared directory: ***
[2024-05-19 19:42:44] total 820872
[2024-05-19 19:42:44] -rw-r--r-- 2 boinc boinc 603716825 May 19 17:31 ATLAS.root_0
[2024-05-19 19:42:44] -rw-r--r-- 2 boinc boinc     17537 May 19 17:31 start_atlas.sh
[2024-05-19 19:42:44] -rw-r--r-- 2 boinc boinc    480006 May 19 17:31 input.tar.gz
[2024-05-19 19:42:44] -rw------- 1 boinc boinc 235215916 May 19 19:41 HITS.pool.root.1
[2024-05-19 19:42:44] -rw------- 1 boinc boinc   1126400 May 19 19:42 result.tar.gz
19:42:45 (3781613): run_atlas exited; CPU time 28231.417222
19:42:45 (3781613): called boinc_finish(0)

</stderr_txt>
]]>

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