Name MyXMDmbecR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmYsOKDmxPbNUn_0
Workunit 223038130
Created 15 May 2024, 22:52:08 UTC
Sent 16 May 2024, 2:43:50 UTC
Report deadline 24 May 2024, 2:43:50 UTC
Received 16 May 2024, 6:39:06 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10804957
Run time 3 hours 50 min 30 sec
CPU time 10 hours 19 min 9 sec
Validate state Valid
Credit 903.90
Device peak FLOPS 41.63 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.35 GB
Peak swap size 31.58 GB
Peak disk usage 1.32 GB

Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:44:44 (77359): wrapper (7.7.26015): starting
22:44:44 (77359): wrapper: running run_atlas (--nthreads 8)
[2024-05-15 22:44:44] Arguments: --nthreads 8
[2024-05-15 22:44:44] Threads: 8
[2024-05-15 22:44:44] Checking for CVMFS
[2024-05-15 22:44:44] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 22:44:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 22:44:45] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 22:44:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 22:44:46] 2.11.2.0 18811 3164 99436 132782 0 301 10883073 18432000 24019 130560 0 359373 95.907 3488907 58215 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-05-15 22:44:46] CVMFS is ok
[2024-05-15 22:44:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 22:44:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 22:44:46] Further information can be found at the LHC@home message board.
[2024-05-15 22:44:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 22:44:46] Checking for apptainer binary...
[2024-05-15 22:44:46] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 22:44:46] Running /usr/bin/apptainer --version
[2024-05-15 22:44:47] apptainer version 1.3.0-1.el7
[2024-05-15 22:44:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 22:44:59] c-212-7.aglt2.org
[2024-05-15 22:44:59] apptainer works
[2024-05-15 22:44:59] Set ATHENA_PROC_NUMBER=8
[2024-05-15 22:44:59] Set ATHENA_CORE_NUMBER=8
[2024-05-15 22:44:59] Starting ATLAS job with PandaID=6207034537
[2024-05-15 22:44:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 02:35:11]  *** The last 200 lines of the pilot log: ***
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | sum of deviations: 213609687390.02087
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | mean x: 1715834925.0157068
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | mean y: 2320335.6596858636
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | -- intersect: -169637523722.5032
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | intersect: -169637523722.5032
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | chi2: 7.5833996835954975
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | -- intersect: -169637523722.5032
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | current memory leak: 98.87 B/s (using 191 data points, chi2=7.58)
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | ..............................
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . Timing measurements:
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . get job = 0 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . initial setup = 5 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . payload setup = 84 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . stage-in = 0 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . payload execution = 13321 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . stage-out = 2 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,981 | INFO     | . log creation = 1 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,981 | INFO     | ..............................
[2024-05-16 02:35:11] 2024-05-16 06:34:53,981 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-05-16 02:35:11] 2024-05-16 06:34:53,981 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/5/PanDA_Pilot-6207034537/pilotlog.txt
[2024-05-16 02:35:11] 2024-05-16 06:34:54,026 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-05-16 02:35:11] - Log from pilotlog.txt -
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | sum of deviations: 213609687390.02087
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | mean x: 1715834925.0157068
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | mean y: 2320335.6596858636
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | -- intersect: -169637523722.5032
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | intersect: -169637523722.5032
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | chi2: 7.5833996835954975
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | -- intersect: -169637523722.5032
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | current memory leak: 98.87 B/s (using 191 data points, chi2=7.58)
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | ..............................
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . Timing measurements:
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . get job = 0 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . initial setup = 5 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . payload setup = 84 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . stage-in = 0 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . payload execution = 13321 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . stage-out = 2 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,981 | INFO     | . log creation = 1 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,981 | INFO     | ..............................
[2024-05-16 02:35:11] 2024-05-16 06:34:53,981 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-05-16 02:35:11] 2024-05-16 06:34:53,981 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/5/PanDA_Pilot-6207034537/pilotlog.txt
[2024-05-16 02:35:11] 2024-05-16 06:34:54,026 | WARNING  | 
[2024-05-16 02:35:11] [begin log extracts]
[2024-05-16 02:35:11] - Log from pilotlog.txt -
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | sum of deviations: 213609687390.02087
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | mean x: 1715834925.0157068
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | mean y: 2320335.6596858636
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | -- intersect: -169637523722.5032
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | intersect: -169637523722.5032
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | chi2: 7.5833996835954975
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | -- intersect: -169637523722.5032
[2024-05-16 02:35:11] 2024-05-16 06:34:53,975 | INFO     | current memory leak: 98.87 B/s (using 191 data points, chi2=7.58)
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | ..............................
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . Timing measurements:
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . get job = 0 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . initial setup = 5 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . payload setup = 84 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . stage-in = 0 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . payload execution = 13321 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,980 | INFO     | . stage-out = 2 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,981 | INFO     | . log creation = 1 s
[2024-05-16 02:35:11] 2024-05-16 06:34:53,981 | INFO     | ..............................
[2024-05-16 02:35:11] 2024-05-16 06:34:53,981 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-05-16 02:35:11] 2024-05-16 06:34:53,981 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/5/PanDA_Pilot-6207034537/pilotlog.txt
[2024-05-16 02:35:11] [end log extracts]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,026 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-05-16 02:35:11] 2024-05-16 06:34:54,026 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-05-16 02:32:15,320 CRITICAL Transform executor raised TransformValidationExcep
[2024-05-16 02:35:11] 2024-05-16 06:34:54,182 | INFO     | 
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | job summary report
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | --------------------------------------------------
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | PanDA job id: 6207034537
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | task id: 38920987
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-05-16 02:32:15,320 CRITICAL Transform executor raised TransformValidationExceptio
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | pilot state: failed 
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | transexitcode: 65
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | exeerrorcode: 65
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | exeerrordiag: EVNTtoHITS got a SIGBUS signal (exit code 135)
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | exitcode: 65
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | exitmsg: EVNTtoHITS got a SIGBUS signal (exit code 135)
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | cpuconsumptiontime: 37308 s
[2024-05-16 02:35:11] 2024-05-16 06:34:54,183 | INFO     | nevents: 0
[2024-05-16 02:35:11] 2024-05-16 06:34:54,184 | INFO     | neventsw: 0
[2024-05-16 02:35:11] 2024-05-16 06:34:54,184 | INFO     | pid: 82414
[2024-05-16 02:35:11] 2024-05-16 06:34:54,184 | INFO     | pgrp: 82414
[2024-05-16 02:35:11] 2024-05-16 06:34:54,184 | INFO     | corecount: 8
[2024-05-16 02:35:11] 2024-05-16 06:34:54,184 | INFO     | event service: False
[2024-05-16 02:35:11] 2024-05-16 06:34:54,184 | INFO     | sizes: {0: 2391215, 1: 2391979, 2: 2392178, 13: 2392178, 23: 2392234, 34: 2392262, 45: 2392418, 55: 2392652, 56: 2392680, 13409: 2402347, 13410: 2422741, 13413: 24
[2024-05-16 02:35:11] 2024-05-16 06:34:54,184 | INFO     | --------------------------------------------------
[2024-05-16 02:35:11] 2024-05-16 06:34:54,184 | INFO     | 
[2024-05-16 02:35:11] 2024-05-16 06:34:54,184 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-05-16 02:35:11] 2024-05-16 06:34:54,259 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,259 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 02:35:11] 2024-05-16 06:34:54,260 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,261 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 02:35:11] 2024-05-16 06:34:54,261 | INFO     | job 6207034537 has completed (purged errors)
[2024-05-16 02:35:11] 2024-05-16 06:34:54,261 | INFO     | overall cleanup function is called
[2024-05-16 02:35:11] 2024-05-16 06:34:55,268 | INFO     | --- collectZombieJob: --- 10, [82414]
[2024-05-16 02:35:11] 2024-05-16 06:34:55,268 | INFO     | zombie collector waiting for pid 82414
[2024-05-16 02:35:11] 2024-05-16 06:34:55,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 02:35:11] 2024-05-16 06:34:56,274 | INFO     | collected zombie processes
[2024-05-16 02:35:11] 2024-05-16 06:34:56,274 | INFO     | will now attempt to kill all subprocesses of pid=82414
[2024-05-16 02:35:11] 2024-05-16 06:34:56,457 | INFO     | process IDs to be killed: [82414] (in reverse order)
[2024-05-16 02:35:11] 2024-05-16 06:34:56,735 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 02:35:11] 2024-05-16 06:34:56,736 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 02:35:11] 2024-05-16 06:34:56,746 | INFO     | did not find any defunct processes belonging to 82414
[2024-05-16 02:35:11] 2024-05-16 06:34:56,755 | INFO     | did not find any defunct processes belonging to 82414
[2024-05-16 02:35:11] 2024-05-16 06:34:56,755 | INFO     | ready for new job
[2024-05-16 02:35:11] 2024-05-16 06:34:56,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 02:35:11] 2024-05-16 06:34:56,757 | INFO     | *************************************
[2024-05-16 02:35:11] 2024-05-16 06:34:56,757 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 02:35:11] 2024-05-16 06:34:56,757 | INFO     | *************************************
[2024-05-16 02:35:11] 2024-05-16 06:34:56,757 | INFO     | 
[2024-05-16 02:35:11] 2024-05-16 06:34:56,762 | INFO     | architecture information:
[2024-05-16 02:35:11] 2024-05-16 06:34:56,762 | INFO     | executing command: cat /etc/os-release
[2024-05-16 02:35:11] 2024-05-16 06:34:56,777 | INFO     | cat /etc/os-release:
[2024-05-16 02:35:11] NAME="CentOS Linux"
[2024-05-16 02:35:11] VERSION="7 (Core)"
[2024-05-16 02:35:11] ID="centos"
[2024-05-16 02:35:11] ID_LIKE="rhel fedora"
[2024-05-16 02:35:11] VERSION_ID="7"
[2024-05-16 02:35:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 02:35:11] ANSI_COLOR="0;31"
[2024-05-16 02:35:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 02:35:11] HOME_URL="https://www.centos.org/"
[2024-05-16 02:35:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 02:35:11] 
[2024-05-16 02:35:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 02:35:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 02:35:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 02:35:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 02:35:11] 
[2024-05-16 02:35:11] 2024-05-16 06:34:56,777 | INFO     | *************************************
[2024-05-16 02:35:11] 2024-05-16 06:34:57,281 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-05-16 02:35:11] 2024-05-16 06:34:57,314 | INFO     | sufficient remaining disk space (99801366528 B)
[2024-05-16 02:35:11] 2024-05-16 06:34:57,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 02:35:11] 2024-05-16 06:34:57,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 02:35:11] 2024-05-16 06:34:57,750 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-16 02:35:11] 2024-05-16 06:34:57,750 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-16 02:35:11] 2024-05-16 06:34:57,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 02:35:11] 2024-05-16 06:34:57,751 | INFO     | will abort loop
[2024-05-16 02:35:11] 2024-05-16 06:34:57,903 | INFO     | all data control threads have been joined
[2024-05-16 02:35:11] 2024-05-16 06:34:58,194 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 02:35:11] 2024-05-16 06:34:58,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 02:35:11] 2024-05-16 06:34:58,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 02:35:11] 2024-05-16 06:34:58,238 | INFO     | all payload control threads have been joined
[2024-05-16 02:35:11] 2024-05-16 06:34:58,321 | INFO     | [job] retrieve thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:58,339 | INFO     | all job control threads have been joined
[2024-05-16 02:35:11] 2024-05-16 06:34:58,467 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:58,501 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:58,564 | INFO     | [data] copytool_in thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:58,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 02:35:11] 2024-05-16 06:34:58,757 | INFO     | [job] job monitor thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:58,842 | INFO     | [payload] failed_post thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:58,846 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:58,909 | INFO     | [data] control thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:59,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 02:35:11] 2024-05-16 06:34:59,244 | INFO     | [payload] control thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:59,345 | INFO     | [job] control thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:59,424 | INFO     | [job] validate thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:59,488 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:59,660 | INFO     | [payload] validate_post thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:34:59,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 02:35:11] 2024-05-16 06:35:00,206 | INFO     | [job] queue monitor thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:35:00,692 | INFO     | [data] copytool_out thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:35:04,008 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 02:35:11] 2024-05-16 06:35:05,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816856450880)>', '<ExcThread(monitor, started 139816209475328)>']
[2024-05-16 02:35:11] 2024-05-16 06:35:06,243 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 02:35:11] 2024-05-16 06:35:06,243 | INFO     | [monitor] control thread has ended
[2024-05-16 02:35:11] 2024-05-16 06:35:10,434 | INFO     | all workflow threads have been joined
[2024-05-16 02:35:11] 2024-05-16 06:35:10,434 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 02:35:11] 2024-05-16 06:35:10,435 | INFO     | traces error code: 0
[2024-05-16 02:35:11] 2024-05-16 06:35:10,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 02:35:11] 2024-05-16 06:35:10,563 [wrapper] ==== pilot stdout END ====
[2024-05-16 02:35:11] 2024-05-16 06:35:10,565 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 02:35:11] 2024-05-16 06:35:10,568 [wrapper] pilotpid: 23240
[2024-05-16 02:35:11] 2024-05-16 06:35:10,570 [wrapper] Pilot exit status: 0
[2024-05-16 02:35:11] 2024-05-16 06:35:10,661 [wrapper] pandaids: 6207034537
[2024-05-16 02:35:11] 2024-05-16 06:35:11,014 [wrapper] cleanup: SIGTERM to supervisor_pilot 30866 23241
[2024-05-16 02:35:11] 2024-05-16 06:35:11,017 [wrapper] Test setup, not cleaning
[2024-05-16 02:35:11] 2024-05-16 06:35:11,018 [wrapper] ==== wrapper stdout END ====
[2024-05-16 02:35:11] 2024-05-16 06:35:11,033 [wrapper] ==== wrapper stderr END ====
[2024-05-16 02:35:11] 2024-05-16 06:35:11,118 [wrapper] apfmon messages muted
[2024-05-16 02:35:11]  *** Error codes and diagnostics ***
[2024-05-16 02:35:11]     "exeErrorCode": 65,
[2024-05-16 02:35:11]     "exeErrorDiag": "EVNTtoHITS got a SIGBUS signal (exit code 135)",
[2024-05-16 02:35:11]     "pilotErrorCode": 1305,
[2024-05-16 02:35:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-05-16 02:32:15,320 CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGBUS signal (exit code 135)",
[2024-05-16 02:35:11]  *** Listing of results directory ***
[2024-05-16 02:35:11] total 628568
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas    467845 May 15 18:23 pilot3.tar.gz
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas      5633 May 15 18:50 queuedata.json
[2024-05-16 02:35:11] -rwx------ 1 boincer umatlas     32251 May 15 18:51 runpilot2-wrapper.sh
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas       100 May 15 22:44 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 02:35:11] -rwxr-xr-x 1 boincer umatlas      7986 May 15 22:44 run_atlas
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas       105 May 15 22:44 job.xml
[2024-05-16 02:35:11] -rw-r--r-- 2 boincer umatlas 636890947 May 15 22:44 EVNT.38776170._000037.pool.root.1
[2024-05-16 02:35:11] -rw-r--r-- 2 boincer umatlas     17537 May 15 22:44 start_atlas.sh
[2024-05-16 02:35:11] drwxrwx--x 2 boincer umatlas      4096 May 15 22:44 shared
[2024-05-16 02:35:11] -rw-r--r-- 2 boincer umatlas    479999 May 15 22:44 input.tar.gz
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas         0 May 15 22:44 boinc_lockfile
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas      2614 May 15 22:44 pandaJob.out
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas       467 May 15 22:45 setup.sh.local
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas   1011355 May 15 22:47 agis_schedconf.cvmfs.json
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas   1324701 May 15 22:47 cric_ddmendpoints.json
[2024-05-16 02:35:11] drwx------ 4 boincer umatlas      4096 May 15 22:47 pilot3
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas      6387 May 16 02:31 init_data.xml
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas       532 May 16 02:32 boinc_task_state.xml
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas      1081 May 16 02:32 memory_monitor_summary.json
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas    362970 May 16 02:32 log.38920987._000912.job.log.tgz.1
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas         0 May 16 02:32 agis_ddmendpoints.agis.ALL.json
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas        95 May 16 02:34 pilot_heartbeat.json
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas      8731 May 16 02:34 heartbeat.json
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas      8192 May 16 02:35 boinc_mmap_file
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas        28 May 16 02:35 wrapper_checkpoint.txt
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas      4397 May 16 02:35 pilotlog.txt
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas   1259500 May 16 02:35 log.38920987._000912.job.log.1
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas       188 May 16 02:35 output.list
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas       620 May 16 02:35 runtime_log
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas   1638400 May 16 02:35 result.tar.gz
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas     11248 May 16 02:35 runtime_log.err
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas       650 May 16 02:35 MyXMDmbecR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmYsOKDmxPbNUn.diag
[2024-05-16 02:35:11] -rw-r--r-- 1 boincer umatlas     21322 May 16 02:35 stderr.txt
[2024-05-16 02:35:11] No HITS result produced
[2024-05-16 02:35:11]  *** Contents of shared directory: ***
[2024-05-16 02:35:11] total 624060
[2024-05-16 02:35:11] -rw-r--r-- 2 boincer umatlas 636890947 May 15 22:44 ATLAS.root_0
[2024-05-16 02:35:11] -rw-r--r-- 2 boincer umatlas     17537 May 15 22:44 start_atlas.sh
[2024-05-16 02:35:11] -rw-r--r-- 2 boincer umatlas    479999 May 15 22:44 input.tar.gz
[2024-05-16 02:35:11] -rw------- 1 boincer umatlas   1638400 May 16 02:35 result.tar.gz
02:35:13 (77359): run_atlas exited; CPU time 36378.852348
02:35:13 (77359): called boinc_finish(0)

</stderr_txt>
]]>


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