Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:41:53 (3909075): wrapper (7.7.26015): starting
17:41:53 (3909075): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 17:41:53] Arguments: --nthreads 4
[2024-05-19 17:41:53] Threads: 4
[2024-05-19 17:41:53] Checking for CVMFS
[2024-05-19 17:41:53] No cvmfs_config command found, will try listing directly
[2024-05-19 17:41:53] CVMFS is ok
[2024-05-19 17:41:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 17:41:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 17:41:53] Further information can be found at the LHC@home message board.
[2024-05-19 17:41:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 17:41:53] Checking for apptainer binary...
[2024-05-19 17:41:53] which: no apptainer in ((null))
[2024-05-19 17:41:53] apptainer is not installed, using version from CVMFS
[2024-05-19 17:41:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 17:41:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-05-19 17:41:54] apptainer works
[2024-05-19 17:41:54] Set ATHENA_PROC_NUMBER=4
[2024-05-19 17:41:54] Set ATHENA_CORE_NUMBER=4
[2024-05-19 17:41:54] Starting ATLAS job with PandaID=6207007133
[2024-05-19 17:41:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 22:36:47]  *** The last 200 lines of the pilot log: ***
[2024-05-19 22:36:47] 2024-05-19 20:36:34,570 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 22:36:47] 2024-05-19 20:36:34,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 22:36:47] 2024-05-19 20:36:34,575 | INFO     | fitting pss+swap vs Time
[2024-05-19 22:36:47] 2024-05-19 20:36:34,576 | INFO     | model: linear, x: [1716133347.0, 1716133408.0, 1716133469.0, 1716133530.0, 1716133591.0, 1716133652.0, 1716133713.0, 1716133774.0, 1716133835.0, 1716133896.0, 1716
[2024-05-19 22:36:47] 2024-05-19 20:36:34,576 | INFO     | sum of square deviations: 7562532492.5
[2024-05-19 22:36:47] 2024-05-19 20:36:34,578 | INFO     | sum of deviations: 114875809237.5
[2024-05-19 22:36:47] 2024-05-19 20:36:34,579 | INFO     | mean x: 1716142161.5
[2024-05-19 22:36:47] 2024-05-19 20:36:34,579 | INFO     | mean y: 2302432.293103448
[2024-05-19 22:36:47] 2024-05-19 20:36:34,579 | INFO     | -- intersect: -26066110465.690216
[2024-05-19 22:36:47] 2024-05-19 20:36:34,579 | INFO     | intersect: -26066110465.690216
[2024-05-19 22:36:47] 2024-05-19 20:36:34,579 | INFO     | chi2: 4.804606053125719
[2024-05-19 22:36:47] 2024-05-19 20:36:34,580 | INFO     | model: linear, x: [1716133347.0, 1716133408.0, 1716133469.0, 1716133530.0, 1716133591.0, 1716133652.0, 1716133713.0, 1716133774.0, 1716133835.0, 1716133896.0, 1716
[2024-05-19 22:36:47] 2024-05-19 20:36:34,580 | INFO     | sum of square deviations: 7178069470.0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,582 | INFO     | sum of deviations: 131053551191.99998
[2024-05-19 22:36:47] 2024-05-19 20:36:34,582 | INFO     | mean x: 1716142009.0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,582 | INFO     | mean y: 2308746.807017544
[2024-05-19 22:36:47] 2024-05-19 20:36:34,583 | INFO     | -- intersect: -31330141512.861923
[2024-05-19 22:36:47] 2024-05-19 20:36:34,583 | INFO     | intersect: -31330141512.861923
[2024-05-19 22:36:47] 2024-05-19 20:36:34,583 | INFO     | chi2: 4.018756844790808
[2024-05-19 22:36:47] 2024-05-19 20:36:34,583 | INFO     | current chi2=4.018756844790808 (change=16.35616322432228 %)
[2024-05-19 22:36:47] 2024-05-19 20:36:34,583 | INFO     | right removable region: 284
[2024-05-19 22:36:47] 2024-05-19 20:36:34,583 | INFO     | model: linear, x: [1716133652.0, 1716133713.0, 1716133774.0, 1716133835.0, 1716133896.0, 1716133957.0, 1716134018.0, 1716134079.0, 1716134140.0, 1716134201.0, 1716
[2024-05-19 22:36:47] 2024-05-19 20:36:34,584 | INFO     | sum of square deviations: 7178069470.0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,586 | INFO     | sum of deviations: 47166372847.0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,586 | INFO     | mean x: 1716142314.0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,586 | INFO     | mean y: 2329237.592982456
[2024-05-19 22:36:47] 2024-05-19 20:36:34,586 | INFO     | -- intersect: -11274269376.969791
[2024-05-19 22:36:47] 2024-05-19 20:36:34,586 | INFO     | intersect: -11274269376.969791
[2024-05-19 22:36:47] 2024-05-19 20:36:34,587 | INFO     | chi2: 2.3504109903394323
[2024-05-19 22:36:47] 2024-05-19 20:36:34,587 | INFO     | current chi2=2.3504109903394323 (change=51.08004768028105 %)
[2024-05-19 22:36:47] 2024-05-19 20:36:34,587 | INFO     | model: linear, x: [1716133957.0, 1716134018.0, 1716134079.0, 1716134140.0, 1716134201.0, 1716134262.0, 1716134323.0, 1716134384.0, 1716134445.0, 1716134506.0, 1716
[2024-05-19 22:36:47] 2024-05-19 20:36:34,587 | INFO     | sum of square deviations: 6806862510.0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,589 | INFO     | sum of deviations: -7465768009.500002
[2024-05-19 22:36:47] 2024-05-19 20:36:34,590 | INFO     | mean x: 1716142466.5
[2024-05-19 22:36:47] 2024-05-19 20:36:34,590 | INFO     | mean y: 2351682.425
[2024-05-19 22:36:47] 2024-05-19 20:36:34,590 | INFO     | -- intersect: 1884617044.3766298
[2024-05-19 22:36:47] 2024-05-19 20:36:34,590 | INFO     | intersect: 1884617044.3766298
[2024-05-19 22:36:47] 2024-05-19 20:36:34,590 | INFO     | chi2: 0.881732489470803
[2024-05-19 22:36:47] 2024-05-19 20:36:34,590 | INFO     | current chi2=0.881732489470803 (change=62.48602933296068 %)
[2024-05-19 22:36:47] 2024-05-19 20:36:34,591 | INFO     | model: linear, x: [1716134262.0, 1716134323.0, 1716134384.0, 1716134445.0, 1716134506.0, 1716134567.0, 1716134628.0, 1716134689.0, 1716134750.0, 1716134811.0, 1716
[2024-05-19 22:36:47] 2024-05-19 20:36:34,591 | INFO     | sum of square deviations: 6448679050.0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,593 | INFO     | sum of deviations: -15201382756.000002
[2024-05-19 22:36:47] 2024-05-19 20:36:34,593 | INFO     | mean x: 1716142619.0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,593 | INFO     | mean y: 2354951.178181818
[2024-05-19 22:36:47] 2024-05-19 20:36:34,593 | INFO     | -- intersect: 4047794430.028239
[2024-05-19 22:36:47] 2024-05-19 20:36:34,593 | INFO     | intersect: 4047794430.028239
[2024-05-19 22:36:47] 2024-05-19 20:36:34,594 | INFO     | chi2: 0.8289958764952644
[2024-05-19 22:36:47] 2024-05-19 20:36:34,594 | INFO     | current chi2=0.8289958764952644 (change=5.981021863807009 %)
[2024-05-19 22:36:47] 2024-05-19 20:36:34,594 | INFO     | left removable region: 30
[2024-05-19 22:36:47] 2024-05-19 20:36:34,594 | INFO     | model: linear, x: [1716135177.0, 1716135238.0, 1716135299.0, 1716135360.0, 1716135421.0, 1716135482.0, 1716135543.0, 1716135604.0, 1716135665.0, 1716135726.0, 1716
[2024-05-19 22:36:47] 2024-05-19 20:36:34,594 | INFO     | sum of square deviations: 5081276667.5
[2024-05-19 22:36:47] 2024-05-19 20:36:34,596 | INFO     | sum of deviations: 7589432364.0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,596 | INFO     | mean x: 1716142893.5
[2024-05-19 22:36:47] 2024-05-19 20:36:34,596 | INFO     | mean y: 2359990.433070866
[2024-05-19 22:36:47] 2024-05-19 20:36:34,597 | INFO     | -- intersect: -2560883711.7811637
[2024-05-19 22:36:47] 2024-05-19 20:36:34,597 | INFO     | intersect: -2560883711.7811637
[2024-05-19 22:36:47] 2024-05-19 20:36:34,597 | INFO     | chi2: 0.002012405030954829
[2024-05-19 22:36:47] 2024-05-19 20:36:34,597 | INFO     | -- intersect: -2560883711.7811637
[2024-05-19 22:36:47] 2024-05-19 20:36:34,597 | INFO     | current memory leak: 1.49 B/s (using 254 data points, chi2=0.00)
[2024-05-19 22:36:47] 2024-05-19 20:36:34,598 | INFO     | ..............................
[2024-05-19 22:36:47] 2024-05-19 20:36:34,598 | INFO     | . Timing measurements:
[2024-05-19 22:36:47] 2024-05-19 20:36:34,598 | INFO     | . get job = 0 s
[2024-05-19 22:36:47] 2024-05-19 20:36:34,598 | INFO     | . initial setup = 1 s
[2024-05-19 22:36:47] 2024-05-19 20:36:34,598 | INFO     | . payload setup = 5 s
[2024-05-19 22:36:47] 2024-05-19 20:36:34,598 | INFO     | . stage-in = 0 s
[2024-05-19 22:36:47] 2024-05-19 20:36:34,598 | INFO     | . payload execution = 17634 s
[2024-05-19 22:36:47] 2024-05-19 20:36:34,598 | INFO     | . stage-out = 1 s
[2024-05-19 22:36:47] 2024-05-19 20:36:34,598 | INFO     | . log creation = 0 s
[2024-05-19 22:36:47] 2024-05-19 20:36:34,598 | INFO     | ..............................
[2024-05-19 22:36:47] 2024-05-19 20:36:34,723 | INFO     | 
[2024-05-19 22:36:47] 2024-05-19 20:36:34,723 | INFO     | job summary report
[2024-05-19 22:36:47] 2024-05-19 20:36:34,724 | INFO     | --------------------------------------------------
[2024-05-19 22:36:47] 2024-05-19 20:36:34,724 | INFO     | PanDA job id: 6207007133
[2024-05-19 22:36:47] 2024-05-19 20:36:34,724 | INFO     | task id: 38920987
[2024-05-19 22:36:47] 2024-05-19 20:36:34,724 | INFO     | errors: (none)
[2024-05-19 22:36:47] 2024-05-19 20:36:34,724 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 22:36:47] 2024-05-19 20:36:34,724 | INFO     | pilot state: finished 
[2024-05-19 22:36:47] 2024-05-19 20:36:34,724 | INFO     | transexitcode: 0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,724 | INFO     | exeerrorcode: 0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,724 | INFO     | exeerrordiag: 
[2024-05-19 22:36:47] 2024-05-19 20:36:34,724 | INFO     | exitcode: 0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,725 | INFO     | exitmsg: OK
[2024-05-19 22:36:47] 2024-05-19 20:36:34,725 | INFO     | cpuconsumptiontime: 67606 s
[2024-05-19 22:36:47] 2024-05-19 20:36:34,725 | INFO     | nevents: 400
[2024-05-19 22:36:47] 2024-05-19 20:36:34,725 | INFO     | neventsw: 0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,725 | INFO     | pid: 3920507
[2024-05-19 22:36:47] 2024-05-19 20:36:34,725 | INFO     | pgrp: 3920507
[2024-05-19 22:36:47] 2024-05-19 20:36:34,725 | INFO     | corecount: 4
[2024-05-19 22:36:47] 2024-05-19 20:36:34,725 | INFO     | event service: False
[2024-05-19 22:36:47] 2024-05-19 20:36:34,725 | INFO     | sizes: {0: 2391175, 1: 2392110, 5: 2392316, 12: 2392372, 17643: 2424561, 17646: 2433543, 17648: 2433727, 17656: 2433897}
[2024-05-19 22:36:47] 2024-05-19 20:36:34,725 | INFO     | --------------------------------------------------
[2024-05-19 22:36:47] 2024-05-19 20:36:34,725 | INFO     | 
[2024-05-19 22:36:47] 2024-05-19 20:36:34,725 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2024-05-19 22:36:47] 2024-05-19 20:36:34,744 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,744 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,744 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,744 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | job 6207007133 has completed (purged errors)
[2024-05-19 22:36:47] 2024-05-19 20:36:34,745 | INFO     | overall cleanup function is called
[2024-05-19 22:36:47] 2024-05-19 20:36:35,751 | INFO     | --- collectZombieJob: --- 10, [3920507]
[2024-05-19 22:36:47] 2024-05-19 20:36:35,752 | INFO     | zombie collector waiting for pid 3920507
[2024-05-19 22:36:47] 2024-05-19 20:36:35,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 22:36:47] 2024-05-19 20:36:36,756 | INFO     | collected zombie processes
[2024-05-19 22:36:47] 2024-05-19 20:36:36,757 | INFO     | will now attempt to kill all subprocesses of pid=3920507
[2024-05-19 22:36:47] 2024-05-19 20:36:36,926 | INFO     | process IDs to be killed: [3920507] (in reverse order)
[2024-05-19 22:36:47] 2024-05-19 20:36:37,024 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 22:36:47] 2024-05-19 20:36:37,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 22:36:47] 2024-05-19 20:36:37,031 | INFO     | did not find any defunct processes belonging to 3920507
[2024-05-19 22:36:47] 2024-05-19 20:36:37,038 | INFO     | did not find any defunct processes belonging to 3920507
[2024-05-19 22:36:47] 2024-05-19 20:36:37,038 | INFO     | ready for new job
[2024-05-19 22:36:47] 2024-05-19 20:36:37,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 22:36:47] 2024-05-19 20:36:37,040 | INFO     | *************************************
[2024-05-19 22:36:47] 2024-05-19 20:36:37,040 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 22:36:47] 2024-05-19 20:36:37,040 | INFO     | *************************************
[2024-05-19 22:36:47] 2024-05-19 20:36:37,040 | INFO     | 
[2024-05-19 22:36:47] 2024-05-19 20:36:37,042 | INFO     | architecture information:
[2024-05-19 22:36:47] 2024-05-19 20:36:37,043 | INFO     | executing command: cat /etc/os-release
[2024-05-19 22:36:47] 2024-05-19 20:36:37,056 | INFO     | cat /etc/os-release:
[2024-05-19 22:36:47] NAME="CentOS Linux"
[2024-05-19 22:36:47] VERSION="7 (Core)"
[2024-05-19 22:36:47] ID="centos"
[2024-05-19 22:36:47] ID_LIKE="rhel fedora"
[2024-05-19 22:36:47] VERSION_ID="7"
[2024-05-19 22:36:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 22:36:47] ANSI_COLOR="0;31"
[2024-05-19 22:36:47] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 22:36:47] HOME_URL="https://www.centos.org/"
[2024-05-19 22:36:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 22:36:47] 
[2024-05-19 22:36:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 22:36:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 22:36:47] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 22:36:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 22:36:47] 
[2024-05-19 22:36:47] 2024-05-19 20:36:37,057 | INFO     | *************************************
[2024-05-19 22:36:47] 2024-05-19 20:36:37,560 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2024-05-19 22:36:47] 2024-05-19 20:36:37,583 | INFO     | sufficient remaining disk space (579472457728 B)
[2024-05-19 22:36:47] 2024-05-19 20:36:37,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 22:36:47] 2024-05-19 20:36:37,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 22:36:47] 2024-05-19 20:36:37,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 22:36:47] 2024-05-19 20:36:37,584 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 22:36:47] 2024-05-19 20:36:37,584 | INFO     | aborting loop
[2024-05-19 22:36:47] 2024-05-19 20:36:37,585 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 22:36:47] 2024-05-19 20:36:37,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 22:36:47] 2024-05-19 20:36:37,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 22:36:47] 2024-05-19 20:36:37,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 22:36:47] 2024-05-19 20:36:37,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 22:36:47] 2024-05-19 20:36:37,836 | INFO     | all payload control threads have been joined
[2024-05-19 22:36:47] 2024-05-19 20:36:38,473 | INFO     | all data control threads have been joined
[2024-05-19 22:36:47] 2024-05-19 20:36:38,589 | INFO     | [job] retrieve thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:38,590 | INFO     | [job] job monitor thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:38,840 | INFO     | [payload] control thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:38,878 | INFO     | [data] copytool_in thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:38,889 | INFO     | [job] validate thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:39,046 | INFO     | all job control threads have been joined
[2024-05-19 22:36:47] 2024-05-19 20:36:39,116 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:39,157 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:39,309 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:39,336 | INFO     | [payload] validate_post thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:39,351 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:39,478 | INFO     | [data] control thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:39,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 22:36:47] 2024-05-19 20:36:39,773 | INFO     | [data] copytool_out thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:40,052 | INFO     | [job] control thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:40,126 | INFO     | [payload] failed_post thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:40,698 | INFO     | [job] queue monitor thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:41,611 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 22:36:47] 2024-05-19 20:36:41,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47820480996416)>', '<ExcThread(monitor, started 47820652246784)>']
[2024-05-19 22:36:47] 2024-05-19 20:36:42,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 22:36:47] 2024-05-19 20:36:42,611 | INFO     | [monitor] control thread has ended
[2024-05-19 22:36:47] 2024-05-19 20:36:46,756 | INFO     | all workflow threads have been joined
[2024-05-19 22:36:47] 2024-05-19 20:36:46,757 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 22:36:47] 2024-05-19 20:36:46,757 | INFO     | traces error code: 0
[2024-05-19 22:36:47] 2024-05-19 20:36:46,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 22:36:47] 2024-05-19 20:36:46,844 [wrapper] ==== pilot stdout END ====
[2024-05-19 22:36:47] 2024-05-19 20:36:46,847 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 22:36:47] 2024-05-19 20:36:46,849 [wrapper] pilotpid: 3913430
[2024-05-19 22:36:47] 2024-05-19 20:36:46,851 [wrapper] Pilot exit status: 0
[2024-05-19 22:36:47] 2024-05-19 20:36:46,857 [wrapper] pandaids: 6207007133
[2024-05-19 22:36:47] 2024-05-19 20:36:46,924 [wrapper] cleanup: SIGTERM to supervisor_pilot  367941 3913431
[2024-05-19 22:36:47] 2024-05-19 20:36:46,926 [wrapper] Test setup, not cleaning
[2024-05-19 22:36:47] 2024-05-19 20:36:46,928 [wrapper] ==== wrapper stdout END ====
[2024-05-19 22:36:47] 2024-05-19 20:36:46,929 [wrapper] ==== wrapper stderr END ====
[2024-05-19 22:36:47] 2024-05-19 20:36:46,934 [wrapper] apfmon messages muted
[2024-05-19 22:36:47]  *** Error codes and diagnostics ***
[2024-05-19 22:36:47]     "exeErrorCode": 0,
[2024-05-19 22:36:47]     "exeErrorDiag": "",
[2024-05-19 22:36:47]     "pilotErrorCode": 0,
[2024-05-19 22:36:47]     "pilotErrorDiag": "",
[2024-05-19 22:36:47]  *** Listing of results directory ***
[2024-05-19 22:36:47] total 959592
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc    467845 May 16 00:05 pilot3.tar.gz
[2024-05-19 22:36:47] -rwx------ 1 boinc boinc     32251 May 16 00:19 runpilot2-wrapper.sh
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc      5633 May 16 00:19 queuedata.json
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc       100 May 19 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 22:36:47] -rwxr-xr-x 1 boinc boinc      7986 May 19 17:20 run_atlas
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc       105 May 19 17:20 job.xml
[2024-05-19 22:36:47] -rw-r--r-- 2 boinc boinc 638955223 May 19 17:41 EVNT.38776170._000024.pool.root.1
[2024-05-19 22:36:47] -rw-r--r-- 2 boinc boinc     17537 May 19 17:41 start_atlas.sh
[2024-05-19 22:36:47] drwxrwx--x 2 boinc boinc      4096 May 19 17:41 shared
[2024-05-19 22:36:47] -rw-r--r-- 2 boinc boinc    479987 May 19 17:41 input.tar.gz
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc         0 May 19 17:41 boinc_lockfile
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc      2613 May 19 17:41 pandaJob.out
[2024-05-19 22:36:47] -rw------- 1 boinc boinc       424 May 19 17:41 setup.sh.local
[2024-05-19 22:36:47] -rw------- 1 boinc boinc   1014053 May 19 17:42 agis_schedconf.cvmfs.json
[2024-05-19 22:36:47] -rw------- 1 boinc boinc   1324701 May 19 17:42 cric_ddmendpoints.json
[2024-05-19 22:36:47] drwx------ 4 boinc boinc      4096 May 19 17:42 pilot3
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc      6669 May 19 18:21 init_data.xml
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc       531 May 19 22:35 boinc_task_state.xml
[2024-05-19 22:36:47] -rw------- 1 boinc boinc 335490086 May 19 22:35 HITS.38920987._000600.pool.root.1
[2024-05-19 22:36:47] -rw------- 1 boinc boinc        95 May 19 22:35 pilot_heartbeat.json
[2024-05-19 22:36:47] -rw------- 1 boinc boinc      1048 May 19 22:36 memory_monitor_summary.json
[2024-05-19 22:36:47] -rw------- 1 boinc boinc         0 May 19 22:36 agis_ddmendpoints.agis.ALL.json
[2024-05-19 22:36:47] -rw------- 1 boinc boinc    400046 May 19 22:36 log.38920987._000600.job.log.tgz.1
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc        28 May 19 22:36 wrapper_checkpoint.txt
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc      8192 May 19 22:36 boinc_mmap_file
[2024-05-19 22:36:47] -rw------- 1 boinc boinc      7759 May 19 22:36 heartbeat.json
[2024-05-19 22:36:47] -rw------- 1 boinc boinc      4344 May 19 22:36 pilotlog.txt
[2024-05-19 22:36:47] -rw------- 1 boinc boinc   1924780 May 19 22:36 log.38920987._000600.job.log.1
[2024-05-19 22:36:47] -rw------- 1 boinc boinc       357 May 19 22:36 output.list
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc       620 May 19 22:36 runtime_log
[2024-05-19 22:36:47] -rw------- 1 boinc boinc   2344960 May 19 22:36 result.tar.gz
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc     11410 May 19 22:36 runtime_log.err
[2024-05-19 22:36:47] -rw------- 1 boinc boinc       658 May 19 22:36 YUzNDmj9bR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWqOKDm09Wy6m.diag
[2024-05-19 22:36:47] -rw-r--r-- 1 boinc boinc     21336 May 19 22:36 stderr.txt
[2024-05-19 22:36:47] HITS file was successfully produced:
[2024-05-19 22:36:47] -rw------- 1 boinc boinc 335490086 May 19 22:35 shared/HITS.pool.root.1
[2024-05-19 22:36:47]  *** Contents of shared directory: ***
[2024-05-19 22:36:47] total 954400
[2024-05-19 22:36:47] -rw-r--r-- 2 boinc boinc 638955223 May 19 17:41 ATLAS.root_0
[2024-05-19 22:36:47] -rw-r--r-- 2 boinc boinc     17537 May 19 17:41 start_atlas.sh
[2024-05-19 22:36:47] -rw-r--r-- 2 boinc boinc    479987 May 19 17:41 input.tar.gz
[2024-05-19 22:36:47] -rw------- 1 boinc boinc 335490086 May 19 22:35 HITS.pool.root.1
[2024-05-19 22:36:47] -rw------- 1 boinc boinc   2344960 May 19 22:36 result.tar.gz
22:36:49 (3909075): run_atlas exited; CPU time 67237.577324
22:36:49 (3909075): called boinc_finish(0)

</stderr_txt>
]]>

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