Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:02:52 (228226): wrapper (7.7.26015): starting
22:02:52 (228226): wrapper: running run_atlas (--nthreads 8)
[2024-05-15 22:02:52] Arguments: --nthreads 8
[2024-05-15 22:02:52] Threads: 8
[2024-05-15 22:02:52] Checking for CVMFS
[2024-05-15 22:02:53] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 22:02:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 22:02:53] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 22:02:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 22:02:54] 2.11.2.0 184706 3328 112320 132780 2 293 9814516 18432000 19440 130560 0 22218669 98.941 42046798 33806 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-15 22:02:54] CVMFS is ok
[2024-05-15 22:02:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 22:02:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 22:02:54] Further information can be found at the LHC@home message board.
[2024-05-15 22:02:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 22:02:54] Checking for apptainer binary...
[2024-05-15 22:02:54] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 22:02:54] Running /usr/bin/apptainer --version
[2024-05-15 22:02:54] apptainer version 1.3.0-1.el7
[2024-05-15 22:02:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 22:02:58] c6-12-27-2.aglt2.org
[2024-05-15 22:02:58] apptainer works
[2024-05-15 22:02:58] Set ATHENA_PROC_NUMBER=8
[2024-05-15 22:02:58] Set ATHENA_CORE_NUMBER=8
[2024-05-15 22:02:58] Starting ATLAS job with PandaID=6207005432
[2024-05-15 22:02:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 08:07:28]  *** The last 200 lines of the pilot log: ***
[2024-05-16 08:07:28] 2024-05-16 12:07:01,946 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-16 08:07:28] 2024-05-16 12:07:01,946 | INFO     | job 6207005432 has finished - writing final server update
[2024-05-16 08:07:28] 2024-05-16 12:07:01,946 | INFO     | total number of processed events: 400 (read)
[2024-05-16 08:07:28] 2024-05-16 12:07:01,952 | INFO     | executing command: lscpu
[2024-05-16 08:07:28] 2024-05-16 12:07:02,009 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-16 08:07:28] 2024-05-16 12:07:02,009 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-16 08:07:28] 2024-05-16 12:07:02,075 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-16 08:07:28] 2024-05-16 12:07:03,639 | INFO     | monitor loop #2427: job 0:6207005432 is in state 'finished'
[2024-05-16 08:07:28] 2024-05-16 12:07:03,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 08:07:28] 2024-05-16 12:07:06,142 | INFO     | monitor loop #2428: job 0:6207005432 is in state 'finished'
[2024-05-16 08:07:28] 2024-05-16 12:07:06,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 08:07:28] 2024-05-16 12:07:07,600 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-16 08:07:28] 2024-05-16 12:07:07,601 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6207005432/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 08:07:28] 2024-05-16 12:07:07,602 | INFO     | extracted standard info from prmon json
[2024-05-16 08:07:28] 2024-05-16 12:07:07,602 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 08:07:28] 2024-05-16 12:07:07,602 | WARNING  | GPU info not found in prmon json
[2024-05-16 08:07:28] 2024-05-16 12:07:07,602 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 08:07:28] 2024-05-16 12:07:07,602 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 08:07:28] 2024-05-16 12:07:07,613 | INFO     | fitting pss+swap vs Time
[2024-05-16 08:07:28] 2024-05-16 12:07:07,614 | INFO     | model: linear, x: [1715825153.0, 1715825214.0, 1715825275.0, 1715825336.0, 1715825397.0, 1715825458.0, 1715825519.0, 1715825580.0, 1715825641.0, 1715825702.0, 1715
[2024-05-16 08:07:28] 2024-05-16 12:07:07,614 | INFO     | sum of square deviations: 64334297987.44416
[2024-05-16 08:07:28] 2024-05-16 12:07:07,624 | INFO     | sum of deviations: 1189581227463.6077
[2024-05-16 08:07:28] 2024-05-16 12:07:07,625 | INFO     | mean x: 1715843178.6672297
[2024-05-16 08:07:28] 2024-05-16 12:07:07,625 | INFO     | mean y: 2448924.1756756757
[2024-05-16 08:07:28] 2024-05-16 12:07:07,625 | INFO     | -- intersect: -31724559817.13958
[2024-05-16 08:07:28] 2024-05-16 12:07:07,625 | INFO     | intersect: -31724559817.13958
[2024-05-16 08:07:28] 2024-05-16 12:07:07,626 | INFO     | chi2: 17.326062178440566
[2024-05-16 08:07:28] 2024-05-16 12:07:07,627 | INFO     | model: linear, x: [1715825153.0, 1715825214.0, 1715825275.0, 1715825336.0, 1715825397.0, 1715825458.0, 1715825519.0, 1715825580.0, 1715825641.0, 1715825702.0, 1715
[2024-05-16 08:07:28] 2024-05-16 12:07:07,627 | INFO     | sum of square deviations: 62717962992.30309
[2024-05-16 08:07:28] 2024-05-16 12:07:07,636 | INFO     | sum of deviations: 1218933371909.6675
[2024-05-16 08:07:28] 2024-05-16 12:07:07,636 | INFO     | mean x: 1715843026.1686542
[2024-05-16 08:07:28] 2024-05-16 12:07:07,636 | INFO     | mean y: 2451667.427597956
[2024-05-16 08:07:28] 2024-05-16 12:07:07,636 | INFO     | -- intersect: -33345224592.5957
[2024-05-16 08:07:28] 2024-05-16 12:07:07,636 | INFO     | intersect: -33345224592.5957
[2024-05-16 08:07:28] 2024-05-16 12:07:07,637 | INFO     | chi2: 16.573913277938406
[2024-05-16 08:07:28] 2024-05-16 12:07:07,637 | INFO     | current chi2=16.573913277938406 (change=4.341141644049308 %)
[2024-05-16 08:07:28] 2024-05-16 12:07:07,637 | INFO     | right removable region: 586
[2024-05-16 08:07:28] 2024-05-16 12:07:07,638 | INFO     | model: linear, x: [1715825458.0, 1715825519.0, 1715825580.0, 1715825641.0, 1715825702.0, 1715825763.0, 1715825824.0, 1715825885.0, 1715825946.0, 1715826007.0, 1715
[2024-05-16 08:07:28] 2024-05-16 12:07:07,638 | INFO     | sum of square deviations: 62717902602.30316
[2024-05-16 08:07:28] 2024-05-16 12:07:07,647 | INFO     | sum of deviations: 1008386584405.0751
[2024-05-16 08:07:28] 2024-05-16 12:07:07,647 | INFO     | mean x: 1715843331.1686542
[2024-05-16 08:07:28] 2024-05-16 12:07:07,647 | INFO     | mean y: 2466008.221465077
[2024-05-16 08:07:28] 2024-05-16 12:07:07,647 | INFO     | -- intersect: -27585085939.471485
[2024-05-16 08:07:28] 2024-05-16 12:07:07,648 | INFO     | intersect: -27585085939.471485
[2024-05-16 08:07:28] 2024-05-16 12:07:07,648 | INFO     | chi2: 13.577522867290355
[2024-05-16 08:07:28] 2024-05-16 12:07:07,648 | INFO     | current chi2=13.577522867290355 (change=21.63526410412316 %)
[2024-05-16 08:07:28] 2024-05-16 12:07:07,649 | INFO     | left removable region: 10
[2024-05-16 08:07:28] 2024-05-16 12:07:07,649 | INFO     | model: linear, x: [1715825763.0, 1715825824.0, 1715825885.0, 1715825946.0, 1715826007.0, 1715826068.0, 1715826129.0, 1715826190.0, 1715826251.0, 1715826312.0, 1715
[2024-05-16 08:07:28] 2024-05-16 12:07:07,649 | INFO     | sum of square deviations: 59257683762.984375
[2024-05-16 08:07:28] 2024-05-16 12:07:07,657 | INFO     | sum of deviations: 889302825378.9529
[2024-05-16 08:07:28] 2024-05-16 12:07:07,658 | INFO     | mean x: 1715843300.671875
[2024-05-16 08:07:28] 2024-05-16 12:07:07,658 | INFO     | mean y: 2483201.237847222
[2024-05-16 08:07:28] 2024-05-16 12:07:07,658 | INFO     | -- intersect: -25747836391.0411
[2024-05-16 08:07:28] 2024-05-16 12:07:07,658 | INFO     | intersect: -25747836391.0411
[2024-05-16 08:07:28] 2024-05-16 12:07:07,659 | INFO     | chi2: 10.457226957989521
[2024-05-16 08:07:28] 2024-05-16 12:07:07,659 | INFO     | -- intersect: -25747836391.0411
[2024-05-16 08:07:28] 2024-05-16 12:07:07,659 | INFO     | current memory leak: 15.01 B/s (using 576 data points, chi2=10.46)
[2024-05-16 08:07:28] 2024-05-16 12:07:07,660 | INFO     | ..............................
[2024-05-16 08:07:28] 2024-05-16 12:07:07,660 | INFO     | . Timing measurements:
[2024-05-16 08:07:28] 2024-05-16 12:07:07,660 | INFO     | . get job = 0 s
[2024-05-16 08:07:28] 2024-05-16 12:07:07,660 | INFO     | . initial setup = 2 s
[2024-05-16 08:07:28] 2024-05-16 12:07:07,660 | INFO     | . payload setup = 32 s
[2024-05-16 08:07:28] 2024-05-16 12:07:07,661 | INFO     | . stage-in = 0 s
[2024-05-16 08:07:28] 2024-05-16 12:07:07,661 | INFO     | . payload execution = 36093 s
[2024-05-16 08:07:28] 2024-05-16 12:07:07,661 | INFO     | . stage-out = 1 s
[2024-05-16 08:07:28] 2024-05-16 12:07:07,661 | INFO     | . log creation = 0 s
[2024-05-16 08:07:28] 2024-05-16 12:07:07,661 | INFO     | ..............................
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | 
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | job summary report
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | --------------------------------------------------
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | PanDA job id: 6207005432
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | task id: 38920987
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | errors: (none)
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | pilot state: finished 
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | transexitcode: 0
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | exeerrorcode: 0
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | exeerrordiag: 
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | exitcode: 0
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | exitmsg: OK
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | cpuconsumptiontime: 107156 s
[2024-05-16 08:07:28] 2024-05-16 12:07:07,735 | INFO     | nevents: 400
[2024-05-16 08:07:28] 2024-05-16 12:07:07,736 | INFO     | neventsw: 0
[2024-05-16 08:07:28] 2024-05-16 12:07:07,736 | INFO     | pid: 274186
[2024-05-16 08:07:28] 2024-05-16 12:07:07,736 | INFO     | pgrp: 274186
[2024-05-16 08:07:28] 2024-05-16 12:07:07,736 | INFO     | corecount: 8
[2024-05-16 08:07:28] 2024-05-16 12:07:07,736 | INFO     | event service: False
[2024-05-16 08:07:28] 2024-05-16 12:07:07,736 | INFO     | sizes: {0: 2391215, 1: 2392150, 12: 2392150, 22: 2392178, 25: 2392412, 33: 2392440, 36130: 2433432, 36133: 2442392, 36134: 2442448, 36140: 2442618}
[2024-05-16 08:07:28] 2024-05-16 12:07:07,736 | INFO     | --------------------------------------------------
[2024-05-16 08:07:28] 2024-05-16 12:07:07,736 | INFO     | 
[2024-05-16 08:07:28] 2024-05-16 12:07:07,736 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-05-16 08:07:28] 2024-05-16 12:07:07,766 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,766 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,766 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,766 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,766 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,766 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,767 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,767 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 08:07:28] 2024-05-16 12:07:07,767 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,768 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 08:07:28] 2024-05-16 12:07:07,768 | INFO     | job 6207005432 has completed (purged errors)
[2024-05-16 08:07:28] 2024-05-16 12:07:07,768 | INFO     | overall cleanup function is called
[2024-05-16 08:07:28] 2024-05-16 12:07:08,776 | INFO     | --- collectZombieJob: --- 10, [274186]
[2024-05-16 08:07:28] 2024-05-16 12:07:08,776 | INFO     | zombie collector waiting for pid 274186
[2024-05-16 08:07:28] 2024-05-16 12:07:08,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 08:07:28] 2024-05-16 12:07:09,782 | INFO     | collected zombie processes
[2024-05-16 08:07:28] 2024-05-16 12:07:09,782 | INFO     | will now attempt to kill all subprocesses of pid=274186
[2024-05-16 08:07:28] 2024-05-16 12:07:09,974 | INFO     | process IDs to be killed: [274186] (in reverse order)
[2024-05-16 08:07:28] 2024-05-16 12:07:10,107 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 08:07:28] 2024-05-16 12:07:10,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 08:07:28] 2024-05-16 12:07:10,119 | INFO     | did not find any defunct processes belonging to 274186
[2024-05-16 08:07:28] 2024-05-16 12:07:10,128 | INFO     | did not find any defunct processes belonging to 274186
[2024-05-16 08:07:28] 2024-05-16 12:07:10,128 | INFO     | ready for new job
[2024-05-16 08:07:28] 2024-05-16 12:07:10,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 08:07:28] 2024-05-16 12:07:10,130 | INFO     | *************************************
[2024-05-16 08:07:28] 2024-05-16 12:07:10,130 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 08:07:28] 2024-05-16 12:07:10,130 | INFO     | *************************************
[2024-05-16 08:07:28] 2024-05-16 12:07:10,130 | INFO     | 
[2024-05-16 08:07:28] 2024-05-16 12:07:10,134 | INFO     | architecture information:
[2024-05-16 08:07:28] 2024-05-16 12:07:10,134 | INFO     | executing command: cat /etc/os-release
[2024-05-16 08:07:28] 2024-05-16 12:07:10,154 | INFO     | cat /etc/os-release:
[2024-05-16 08:07:28] NAME="CentOS Linux"
[2024-05-16 08:07:28] VERSION="7 (Core)"
[2024-05-16 08:07:28] ID="centos"
[2024-05-16 08:07:28] ID_LIKE="rhel fedora"
[2024-05-16 08:07:28] VERSION_ID="7"
[2024-05-16 08:07:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 08:07:28] ANSI_COLOR="0;31"
[2024-05-16 08:07:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 08:07:28] HOME_URL="https://www.centos.org/"
[2024-05-16 08:07:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 08:07:28] 
[2024-05-16 08:07:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 08:07:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 08:07:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 08:07:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 08:07:28] 
[2024-05-16 08:07:28] 2024-05-16 12:07:10,154 | INFO     | *************************************
[2024-05-16 08:07:28] 2024-05-16 12:07:10,658 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-05-16 08:07:28] 2024-05-16 12:07:10,683 | INFO     | sufficient remaining disk space (102747865088 B)
[2024-05-16 08:07:28] 2024-05-16 12:07:10,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 08:07:28] 2024-05-16 12:07:10,683 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 08:07:28] 2024-05-16 12:07:10,821 | INFO     | all job control threads have been joined
[2024-05-16 08:07:28] 2024-05-16 12:07:10,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 08:07:28] 2024-05-16 12:07:10,984 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 08:07:28] 2024-05-16 12:07:10,984 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 08:07:28] 2024-05-16 12:07:10,984 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 08:07:28] 2024-05-16 12:07:11,154 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-16 08:07:28] 2024-05-16 12:07:11,154 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-16 08:07:28] 2024-05-16 12:07:11,154 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 08:07:28] 2024-05-16 12:07:11,155 | INFO     | will abort loop
[2024-05-16 08:07:28] 2024-05-16 12:07:11,507 | INFO     | all data control threads have been joined
[2024-05-16 08:07:28] 2024-05-16 12:07:11,688 | INFO     | [job] retrieve thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:11,819 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:11,826 | INFO     | [job] control thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:11,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 08:07:28] 2024-05-16 12:07:11,871 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:11,934 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:12,033 | INFO     | all payload control threads have been joined
[2024-05-16 08:07:28] 2024-05-16 12:07:12,155 | INFO     | [job] job monitor thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:12,400 | INFO     | [job] validate thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:12,510 | INFO     | [data] control thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:12,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 08:07:28] 2024-05-16 12:07:12,862 | INFO     | [payload] validate_post thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:12,949 | INFO     | [data] copytool_out thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:13,019 | INFO     | [data] copytool_in thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:13,034 | INFO     | [payload] control thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:13,271 | INFO     | [payload] failed_post thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:13,756 | INFO     | [job] queue monitor thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:15,854 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:21,043 | INFO     | job.realtimelogging is not enabled
[2024-05-16 08:07:28] 2024-05-16 12:07:22,049 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 08:07:28] 2024-05-16 12:07:23,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139782204008256)>', '<ExcThread(monitor, started 139781623232256)>']
[2024-05-16 08:07:28] 2024-05-16 12:07:24,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 08:07:28] 2024-05-16 12:07:24,045 | INFO     | [monitor] control thread has ended
[2024-05-16 08:07:28] 2024-05-16 12:07:28,360 | INFO     | all workflow threads have been joined
[2024-05-16 08:07:28] 2024-05-16 12:07:28,360 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 08:07:28] 2024-05-16 12:07:28,361 | INFO     | traces error code: 0
[2024-05-16 08:07:28] 2024-05-16 12:07:28,361 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 08:07:28] 2024-05-16 12:07:28,473 [wrapper] ==== pilot stdout END ====
[2024-05-16 08:07:28] 2024-05-16 12:07:28,477 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 08:07:28] 2024-05-16 12:07:28,479 [wrapper] pilotpid: 243664
[2024-05-16 08:07:28] 2024-05-16 12:07:28,482 [wrapper] Pilot exit status: 0
[2024-05-16 08:07:28] 2024-05-16 12:07:28,491 [wrapper] pandaids: 6207005432
[2024-05-16 08:07:28] 2024-05-16 12:07:28,579 [wrapper] cleanup: SIGTERM to supervisor_pilot  92374 243665
[2024-05-16 08:07:28] 2024-05-16 12:07:28,582 [wrapper] Test setup, not cleaning
[2024-05-16 08:07:28] 2024-05-16 12:07:28,584 [wrapper] ==== wrapper stdout END ====
[2024-05-16 08:07:28] 2024-05-16 12:07:28,587 [wrapper] ==== wrapper stderr END ====
[2024-05-16 08:07:28] 2024-05-16 12:07:28,591 [wrapper] apfmon messages muted
[2024-05-16 08:07:28]  *** Error codes and diagnostics ***
[2024-05-16 08:07:28]     "exeErrorCode": 0,
[2024-05-16 08:07:28]     "exeErrorDiag": "",
[2024-05-16 08:07:28]     "pilotErrorCode": 0,
[2024-05-16 08:07:28]     "pilotErrorDiag": "",
[2024-05-16 08:07:28]  *** Listing of results directory ***
[2024-05-16 08:07:28] total 961716
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas    467845 May 15 17:49 pilot3.tar.gz
[2024-05-16 08:07:28] -rwx------ 1 boincer umatlas     32251 May 15 18:05 runpilot2-wrapper.sh
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas      5633 May 15 18:05 queuedata.json
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas       100 May 15 22:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 08:07:28] -rwxr-xr-x 1 boincer umatlas      7986 May 15 22:02 run_atlas
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas       105 May 15 22:02 job.xml
[2024-05-16 08:07:28] -rw-r--r-- 2 boincer umatlas 640117274 May 15 22:02 EVNT.38776170._000018.pool.root.1
[2024-05-16 08:07:28] -rw-r--r-- 2 boincer umatlas     17537 May 15 22:02 start_atlas.sh
[2024-05-16 08:07:28] drwxrwx--x 2 boincer umatlas      4096 May 15 22:02 shared
[2024-05-16 08:07:28] -rw-r--r-- 2 boincer umatlas    479997 May 15 22:02 input.tar.gz
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas         0 May 15 22:02 boinc_lockfile
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas      2614 May 15 22:02 pandaJob.out
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas       467 May 15 22:03 setup.sh.local
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas   1011355 May 15 22:03 agis_schedconf.cvmfs.json
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas   1324701 May 15 22:03 cric_ddmendpoints.json
[2024-05-16 08:07:28] drwx------ 4 boincer umatlas      4096 May 15 22:03 pilot3
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas      6388 May 16 08:00 init_data.xml
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas 332793791 May 16 08:06 HITS.38920987._000441.pool.root.1
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas       533 May 16 08:06 boinc_task_state.xml
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas        95 May 16 08:06 pilot_heartbeat.json
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas      1071 May 16 08:06 memory_monitor_summary.json
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas         0 May 16 08:06 agis_ddmendpoints.agis.ALL.json
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas    640071 May 16 08:07 log.38920987._000441.job.log.tgz.1
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas      7791 May 16 08:07 heartbeat.json
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas      8192 May 16 08:07 boinc_mmap_file
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas        29 May 16 08:07 wrapper_checkpoint.txt
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas      4470 May 16 08:07 pilotlog.txt
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas   3541764 May 16 08:07 log.38920987._000441.job.log.1
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas       357 May 16 08:07 output.list
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas       620 May 16 08:07 runtime_log
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas   4198400 May 16 08:07 result.tar.gz
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas     11415 May 16 08:07 runtime_log.err
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas       656 May 16 08:07 RsdKDmOvbR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWpOKDmRaZvtm.diag
[2024-05-16 08:07:28] -rw-r--r-- 1 boincer umatlas     21848 May 16 08:07 stderr.txt
[2024-05-16 08:07:28] HITS file was successfully produced:
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas 332793791 May 16 08:06 shared/HITS.pool.root.1
[2024-05-16 08:07:28]  *** Contents of shared directory: ***
[2024-05-16 08:07:28] total 954712
[2024-05-16 08:07:28] -rw-r--r-- 2 boincer umatlas 640117274 May 15 22:02 ATLAS.root_0
[2024-05-16 08:07:28] -rw-r--r-- 2 boincer umatlas     17537 May 15 22:02 start_atlas.sh
[2024-05-16 08:07:28] -rw-r--r-- 2 boincer umatlas    479997 May 15 22:02 input.tar.gz
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas 332793791 May 16 08:06 HITS.pool.root.1
[2024-05-16 08:07:28] -rw------- 1 boincer umatlas   4198400 May 16 08:07 result.tar.gz
08:07:30 (228226): run_atlas exited; CPU time 106546.057159
08:07:30 (228226): called boinc_finish(0)

</stderr_txt>
]]>

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