Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
06:26:13 (16637): wrapper (7.7.26015): starting
06:26:13 (16637): wrapper: running run_atlas (--nthreads 8)
[2024-05-17 06:26:13] Arguments: --nthreads 8
[2024-05-17 06:26:13] Threads: 8
[2024-05-17 06:26:13] Checking for CVMFS
[2024-05-17 06:26:13] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 06:26:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 06:26:14] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 06:26:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 06:26:14] 2.10.1.0 15049 183533 261316 132842 2 65 44434198 45568000 10999 130560 0 959237431 99.738 686137948 16381 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-17 06:26:14] CVMFS is ok
[2024-05-17 06:26:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 06:26:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 06:26:14] Further information can be found at the LHC@home message board.
[2024-05-17 06:26:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 06:26:14] Checking for apptainer binary...
[2024-05-17 06:26:14] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 06:26:14] Running /usr/bin/apptainer --version
[2024-05-17 06:26:14] apptainer version 1.1.8-1.el7
[2024-05-17 06:26:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 06:26:15] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0008.triumf.lcg
[2024-05-17 06:26:15] apptainer works
[2024-05-17 06:26:15] Set ATHENA_PROC_NUMBER=8
[2024-05-17 06:26:15] Set ATHENA_CORE_NUMBER=8
[2024-05-17 06:26:15] Starting ATLAS job with PandaID=6206926386
[2024-05-17 06:26:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 08:16:07]  *** The last 200 lines of the pilot log: ***
[2024-05-17 08:16:07] 2024-05-17 15:15:46,701 | INFO     | sum of square deviations: 338808892.757282
[2024-05-17 08:16:07] 2024-05-17 15:15:46,702 | INFO     | sum of deviations: 41986157018.805855
[2024-05-17 08:16:07] 2024-05-17 15:15:46,702 | INFO     | mean x: 1715955517.0485437
[2024-05-17 08:16:07] 2024-05-17 15:15:46,702 | INFO     | mean y: 2449832.0388349514
[2024-05-17 08:16:07] 2024-05-17 15:15:46,702 | INFO     | -- intersect: -212643615003.3944
[2024-05-17 08:16:07] 2024-05-17 15:15:46,702 | INFO     | intersect: -212643615003.3944
[2024-05-17 08:16:07] 2024-05-17 15:15:46,702 | INFO     | chi2: 5.011132902716934
[2024-05-17 08:16:07] 2024-05-17 15:15:46,702 | INFO     | current chi2=5.011132902716934 (change=13.391040234224183 %)
[2024-05-17 08:16:07] 2024-05-17 15:15:46,702 | INFO     | right removable region: 102
[2024-05-17 08:16:07] 2024-05-17 15:15:46,703 | INFO     | model: linear, x: [1715952711.0, 1715952772.0, 1715952833.0, 1715952894.0, 1715952955.0, 1715953016.0, 1715953077.0, 1715953138.0, 1715953199.0, 1715953260.0, 1715
[2024-05-17 08:16:07] 2024-05-17 15:15:46,703 | INFO     | sum of square deviations: 338805842.757282
[2024-05-17 08:16:07] 2024-05-17 15:15:46,703 | INFO     | sum of deviations: 9698564309.048542
[2024-05-17 08:16:07] 2024-05-17 15:15:46,703 | INFO     | mean x: 1715955822.0485437
[2024-05-17 08:16:07] 2024-05-17 15:15:46,703 | INFO     | mean y: 2511667.990291262
[2024-05-17 08:16:07] 2024-05-17 15:15:46,703 | INFO     | -- intersect: -49117975027.82648
[2024-05-17 08:16:07] 2024-05-17 15:15:46,703 | INFO     | intersect: -49117975027.82648
[2024-05-17 08:16:07] 2024-05-17 15:15:46,703 | INFO     | chi2: 3.076987065761084
[2024-05-17 08:16:07] 2024-05-17 15:15:46,704 | INFO     | current chi2=3.076987065761084 (change=46.819480913422524 %)
[2024-05-17 08:16:07] 2024-05-17 15:15:46,704 | INFO     | model: linear, x: [1715953016.0, 1715953077.0, 1715953138.0, 1715953199.0, 1715953260.0, 1715953321.0, 1715953382.0, 1715953443.0, 1715953504.0, 1715953565.0, 1715
[2024-05-17 08:16:07] 2024-05-17 15:15:46,704 | INFO     | sum of square deviations: 291817390.24489826
[2024-05-17 08:16:07] 2024-05-17 15:15:46,704 | INFO     | sum of deviations: -9997929508.326532
[2024-05-17 08:16:07] 2024-05-17 15:15:46,704 | INFO     | mean x: 1715955974.5510204
[2024-05-17 08:16:07] 2024-05-17 15:15:46,704 | INFO     | mean y: 2575629.7653061226
[2024-05-17 08:16:07] 2024-05-17 15:15:46,704 | INFO     | -- intersect: 58792789806.361275
[2024-05-17 08:16:07] 2024-05-17 15:15:46,704 | INFO     | intersect: 58792789806.361275
[2024-05-17 08:16:07] 2024-05-17 15:15:46,705 | INFO     | chi2: 1.603003935346229
[2024-05-17 08:16:07] 2024-05-17 15:15:46,705 | INFO     | current chi2=1.603003935346229 (change=47.90345552038482 %)
[2024-05-17 08:16:07] 2024-05-17 15:15:46,705 | INFO     | model: linear, x: [1715953321.0, 1715953382.0, 1715953443.0, 1715953504.0, 1715953565.0, 1715953626.0, 1715953687.0, 1715953748.0, 1715953809.0, 1715953870.0, 1715
[2024-05-17 08:16:07] 2024-05-17 15:15:46,705 | INFO     | sum of square deviations: 249387162.73118243
[2024-05-17 08:16:07] 2024-05-17 15:15:46,705 | INFO     | sum of deviations: -21276916989.548397
[2024-05-17 08:16:07] 2024-05-17 15:15:46,705 | INFO     | mean x: 1715956127.0537634
[2024-05-17 08:16:07] 2024-05-17 15:15:46,705 | INFO     | mean y: 2615494.709677419
[2024-05-17 08:16:07] 2024-05-17 15:15:46,705 | INFO     | -- intersect: 146402517050.12674
[2024-05-17 08:16:07] 2024-05-17 15:15:46,706 | INFO     | intersect: 146402517050.12674
[2024-05-17 08:16:07] 2024-05-17 15:15:46,706 | INFO     | chi2: 0.8866374641345255
[2024-05-17 08:16:07] 2024-05-17 15:15:46,706 | INFO     | current chi2=0.8866374641345255 (change=44.6890026540688 %)
[2024-05-17 08:16:07] 2024-05-17 15:15:46,706 | INFO     | model: linear, x: [1715953626.0, 1715953687.0, 1715953748.0, 1715953809.0, 1715953870.0, 1715953931.0, 1715953992.0, 1715954053.0, 1715954114.0, 1715954175.0, 1715
[2024-05-17 08:16:07] 2024-05-17 15:15:46,706 | INFO     | sum of square deviations: 211282597.71590862
[2024-05-17 08:16:07] 2024-05-17 15:15:46,706 | INFO     | sum of deviations: -19197802913.624996
[2024-05-17 08:16:07] 2024-05-17 15:15:46,706 | INFO     | mean x: 1715956279.5568182
[2024-05-17 08:16:07] 2024-05-17 15:15:46,706 | INFO     | mean y: 2607115.625
[2024-05-17 08:16:07] 2024-05-17 15:15:46,707 | INFO     | -- intersect: 155919804364.51404
[2024-05-17 08:16:07] 2024-05-17 15:15:46,707 | INFO     | intersect: 155919804364.51404
[2024-05-17 08:16:07] 2024-05-17 15:15:46,707 | INFO     | chi2: 0.8869187961143549
[2024-05-17 08:16:07] 2024-05-17 15:15:46,707 | INFO     | current chi2=0.8869187961143549 (change=-0.03173021569802456 %)
[2024-05-17 08:16:07] 2024-05-17 15:15:46,707 | INFO     | left removable region: 40
[2024-05-17 08:16:07] 2024-05-17 15:15:46,707 | INFO     | model: linear, x: [1715954846.0, 1715954907.0, 1715954968.0, 1715955029.0, 1715955090.0, 1715955151.0, 1715955212.0, 1715955275.0, 1715955334.0, 1715955395.0, 1715
[2024-05-17 08:16:07] 2024-05-17 15:15:46,707 | INFO     | sum of square deviations: 73878663.24193564
[2024-05-17 08:16:07] 2024-05-17 15:15:46,707 | INFO     | sum of deviations: -2302658925.951613
[2024-05-17 08:16:07] 2024-05-17 15:15:46,707 | INFO     | mean x: 1715956706.564516
[2024-05-17 08:16:07] 2024-05-17 15:15:46,707 | INFO     | mean y: 2575806.1129032257
[2024-05-17 08:16:07] 2024-05-17 15:15:46,708 | INFO     | -- intersect: 53485717670.46739
[2024-05-17 08:16:07] 2024-05-17 15:15:46,708 | INFO     | intersect: 53485717670.46739
[2024-05-17 08:16:07] 2024-05-17 15:15:46,708 | INFO     | chi2: 0.04534445743818858
[2024-05-17 08:16:07] 2024-05-17 15:15:46,708 | INFO     | -- intersect: 53485717670.46739
[2024-05-17 08:16:07] 2024-05-17 15:15:46,708 | INFO     | current memory leak: -31.17 B/s (using 62 data points, chi2=0.05)
[2024-05-17 08:16:07] 2024-05-17 15:15:46,708 | INFO     | ..............................
[2024-05-17 08:16:07] 2024-05-17 15:15:46,708 | INFO     | . Timing measurements:
[2024-05-17 08:16:07] 2024-05-17 15:15:46,708 | INFO     | . get job = 0 s
[2024-05-17 08:16:07] 2024-05-17 15:15:46,708 | INFO     | . initial setup = 1 s
[2024-05-17 08:16:07] 2024-05-17 15:15:46,709 | INFO     | . payload setup = 4 s
[2024-05-17 08:16:07] 2024-05-17 15:15:46,709 | INFO     | . stage-in = 0 s
[2024-05-17 08:16:07] 2024-05-17 15:15:46,709 | INFO     | . payload execution = 6536 s
[2024-05-17 08:16:07] 2024-05-17 15:15:46,709 | INFO     | . stage-out = 0 s
[2024-05-17 08:16:07] 2024-05-17 15:15:46,709 | INFO     | . log creation = 0 s
[2024-05-17 08:16:07] 2024-05-17 15:15:46,709 | INFO     | ..............................
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | 
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | job summary report
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | --------------------------------------------------
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | PanDA job id: 6206926386
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | task id: 38776104
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | errors: (none)
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | pilot state: finished 
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | transexitcode: 0
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | exeerrorcode: 0
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | exeerrordiag: 
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | exitcode: 0
[2024-05-17 08:16:07] 2024-05-17 15:15:46,778 | INFO     | exitmsg: OK
[2024-05-17 08:16:07] 2024-05-17 15:15:46,779 | INFO     | cpuconsumptiontime: 37289 s
[2024-05-17 08:16:07] 2024-05-17 15:15:46,779 | INFO     | nevents: 400
[2024-05-17 08:16:07] 2024-05-17 15:15:46,779 | INFO     | neventsw: 0
[2024-05-17 08:16:07] 2024-05-17 15:15:46,779 | INFO     | pid: 29727
[2024-05-17 08:16:07] 2024-05-17 15:15:46,779 | INFO     | pgrp: 29727
[2024-05-17 08:16:07] 2024-05-17 15:15:46,779 | INFO     | corecount: 8
[2024-05-17 08:16:07] 2024-05-17 15:15:46,779 | INFO     | event service: False
[2024-05-17 08:16:07] 2024-05-17 15:15:46,779 | INFO     | sizes: {0: 2392198, 4: 2392404, 11: 2392432, 6544: 2419422, 6545: 2419421, 6546: 2428615, 6549: 2428729}
[2024-05-17 08:16:07] 2024-05-17 15:15:46,779 | INFO     | --------------------------------------------------
[2024-05-17 08:16:07] 2024-05-17 15:15:46,779 | INFO     | 
[2024-05-17 08:16:07] 2024-05-17 15:15:46,779 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 08:16:07] 2024-05-17 15:15:46,795 | WARNING  | process 29727 is no longer using CPU - aborting
[2024-05-17 08:16:07] 2024-05-17 15:15:46,795 | INFO     | aborting job monitoring since job object (job id=6206926386) has expired
[2024-05-17 08:16:07] 2024-05-17 15:15:46,811 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,813 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 08:16:07] 2024-05-17 15:15:46,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,813 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 08:16:07] 2024-05-17 15:15:46,813 | INFO     | job 6206926386 has completed (purged errors)
[2024-05-17 08:16:07] 2024-05-17 15:15:46,813 | INFO     | overall cleanup function is called
[2024-05-17 08:16:07] 2024-05-17 15:15:47,820 | INFO     | --- collectZombieJob: --- 10, [29727]
[2024-05-17 08:16:07] 2024-05-17 15:15:47,820 | INFO     | zombie collector waiting for pid 29727
[2024-05-17 08:16:07] 2024-05-17 15:15:47,821 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 08:16:07] 2024-05-17 15:15:48,826 | INFO     | collected zombie processes
[2024-05-17 08:16:07] 2024-05-17 15:15:48,826 | INFO     | will now attempt to kill all subprocesses of pid=29727
[2024-05-17 08:16:07] 2024-05-17 15:15:48,951 | INFO     | process IDs to be killed: [29727] (in reverse order)
[2024-05-17 08:16:07] 2024-05-17 15:15:49,027 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 08:16:07] 2024-05-17 15:15:49,027 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 08:16:07] 2024-05-17 15:15:49,033 | INFO     | did not find any defunct processes belonging to 29727
[2024-05-17 08:16:07] 2024-05-17 15:15:49,037 | INFO     | did not find any defunct processes belonging to 29727
[2024-05-17 08:16:07] 2024-05-17 15:15:49,037 | INFO     | ready for new job
[2024-05-17 08:16:07] 2024-05-17 15:15:49,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 08:16:07] 2024-05-17 15:15:49,038 | INFO     | *************************************
[2024-05-17 08:16:07] 2024-05-17 15:15:49,039 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 08:16:07] 2024-05-17 15:15:49,039 | INFO     | *************************************
[2024-05-17 08:16:07] 2024-05-17 15:15:49,039 | INFO     | 
[2024-05-17 08:16:07] 2024-05-17 15:15:49,040 | INFO     | architecture information:
[2024-05-17 08:16:07] 2024-05-17 15:15:49,040 | INFO     | executing command: cat /etc/os-release
[2024-05-17 08:16:07] 2024-05-17 15:15:49,052 | INFO     | cat /etc/os-release:
[2024-05-17 08:16:07] NAME="CentOS Linux"
[2024-05-17 08:16:07] VERSION="7 (Core)"
[2024-05-17 08:16:07] ID="centos"
[2024-05-17 08:16:07] ID_LIKE="rhel fedora"
[2024-05-17 08:16:07] VERSION_ID="7"
[2024-05-17 08:16:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 08:16:07] ANSI_COLOR="0;31"
[2024-05-17 08:16:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 08:16:07] HOME_URL="https://www.centos.org/"
[2024-05-17 08:16:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 08:16:07] 
[2024-05-17 08:16:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 08:16:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 08:16:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 08:16:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 08:16:07] 
[2024-05-17 08:16:07] 2024-05-17 15:15:49,053 | INFO     | *************************************
[2024-05-17 08:16:07] 2024-05-17 15:15:49,556 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 08:16:07] 2024-05-17 15:15:49,572 | INFO     | sufficient remaining disk space (1406439260160 B)
[2024-05-17 08:16:07] 2024-05-17 15:15:49,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 08:16:07] 2024-05-17 15:15:49,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 08:16:07] 2024-05-17 15:15:49,573 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 08:16:07] 2024-05-17 15:15:49,573 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 08:16:07] 2024-05-17 15:15:49,574 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 08:16:07] 2024-05-17 15:15:49,574 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 08:16:07] 2024-05-17 15:15:49,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 08:16:07] 2024-05-17 15:15:49,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 08:16:07] 2024-05-17 15:15:49,711 | INFO     | all data control threads have been joined
[2024-05-17 08:16:07] 2024-05-17 15:15:49,831 | INFO     | all job control threads have been joined
[2024-05-17 08:16:07] 2024-05-17 15:15:50,005 | INFO     | all payload control threads have been joined
[2024-05-17 08:16:07] 2024-05-17 15:15:50,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 08:16:07] 2024-05-17 15:15:50,301 | INFO     | aborting loop
[2024-05-17 08:16:07] 2024-05-17 15:15:50,578 | INFO     | [job] retrieve thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:50,601 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:50,715 | INFO     | [data] control thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:50,837 | INFO     | [job] control thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:50,968 | INFO     | [job] validate thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:51,011 | INFO     | [payload] control thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:51,086 | INFO     | [payload] failed_post thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:51,307 | INFO     | [job] job monitor thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:51,395 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:51,396 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:51,496 | INFO     | [data] copytool_in thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:51,579 | INFO     | [data] copytool_out thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:51,744 | INFO     | [payload] validate_post thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:51,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 08:16:07] 2024-05-17 15:15:52,787 | INFO     | [job] queue monitor thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:15:53,687 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:16:00,049 | INFO     | job.realtimelogging is not enabled
[2024-05-17 08:16:07] 2024-05-17 15:16:01,055 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 08:16:07] 2024-05-17 15:16:02,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139821485934400)>', '<ExcThread(monitor, started 139820848379648)>']
[2024-05-17 08:16:07] 2024-05-17 15:16:02,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 08:16:07] 2024-05-17 15:16:02,622 | INFO     | [monitor] control thread has ended
[2024-05-17 08:16:07] 2024-05-17 15:16:07,032 | INFO     | all workflow threads have been joined
[2024-05-17 08:16:07] 2024-05-17 15:16:07,033 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 08:16:07] 2024-05-17 15:16:07,033 | INFO     | traces error code: 0
[2024-05-17 08:16:07] 2024-05-17 15:16:07,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 08:16:07] 2024-05-17 15:16:07,125 [wrapper] ==== pilot stdout END ====
[2024-05-17 08:16:07] 2024-05-17 15:16:07,128 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 08:16:07] 2024-05-17 15:16:07,130 [wrapper] pilotpid: 23027
[2024-05-17 08:16:07] 2024-05-17 15:16:07,133 [wrapper] Pilot exit status: 0
[2024-05-17 08:16:07] 2024-05-17 15:16:07,141 [wrapper] pandaids: 6206926386
[2024-05-17 08:16:07] 2024-05-17 15:16:07,199 [wrapper] cleanup: SIGTERM to supervisor_pilot 17843 23028
[2024-05-17 08:16:07] 2024-05-17 15:16:07,201 [wrapper] Test setup, not cleaning
[2024-05-17 08:16:07] 2024-05-17 15:16:07,203 [wrapper] ==== wrapper stdout END ====
[2024-05-17 08:16:07] 2024-05-17 15:16:07,204 [wrapper] ==== wrapper stderr END ====
[2024-05-17 08:16:07] 2024-05-17 15:16:07,208 [wrapper] apfmon messages muted
[2024-05-17 08:16:07]  *** Error codes and diagnostics ***
[2024-05-17 08:16:07]     "exeErrorCode": 0,
[2024-05-17 08:16:07]     "exeErrorDiag": "",
[2024-05-17 08:16:07]     "pilotErrorCode": 0,
[2024-05-17 08:16:07]     "pilotErrorDiag": "",
[2024-05-17 08:16:07]  *** Listing of results directory ***
[2024-05-17 08:16:07] total 813224
[2024-05-17 08:16:07] -rwx------ 1 boinc boinc     32251 May 15 13:39 runpilot2-wrapper.sh
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc    467845 May 15 13:39 pilot3.tar.gz
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc      5633 May 15 13:39 queuedata.json
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc       100 May 17 06:26 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 08:16:07] -rwxr-xr-x 1 boinc boinc      7986 May 17 06:26 run_atlas
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc       105 May 17 06:26 job.xml
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc      6482 May 17 06:26 init_data.xml
[2024-05-17 08:16:07] -rw-r--r-- 2 boinc boinc 602389987 May 17 06:26 EVNT.38776100._000343.pool.root.1
[2024-05-17 08:16:07] drwxrwx--x 2 boinc boinc      4096 May 17 06:26 shared
[2024-05-17 08:16:07] -rw-r--r-- 2 boinc boinc    480000 May 17 06:26 input.tar.gz
[2024-05-17 08:16:07] -rw-r--r-- 2 boinc boinc     17537 May 17 06:26 start_atlas.sh
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc         0 May 17 06:26 boinc_lockfile
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc      2640 May 17 06:26 pandaJob.out
[2024-05-17 08:16:07] -rw------- 1 boinc boinc       424 May 17 06:26 setup.sh.local
[2024-05-17 08:16:07] -rw------- 1 boinc boinc   1019386 May 17 06:26 agis_schedconf.cvmfs.json
[2024-05-17 08:16:07] -rw------- 1 boinc boinc         0 May 17 06:26 agis_ddmendpoints.agis.ALL.json
[2024-05-17 08:16:07] -rw------- 1 boinc boinc   1324701 May 17 06:26 cric_ddmendpoints.json
[2024-05-17 08:16:07] drwx------ 4 boinc boinc      4096 May 17 06:26 pilot3
[2024-05-17 08:16:07] -rw------- 1 boinc boinc 224935990 May 17 08:15 HITS.38776104._008563.pool.root.1
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc       530 May 17 08:15 boinc_task_state.xml
[2024-05-17 08:16:07] -rw------- 1 boinc boinc      1054 May 17 08:15 memory_monitor_summary.json
[2024-05-17 08:16:07] -rw------- 1 boinc boinc    318237 May 17 08:15 log.38776104._008563.job.log.tgz.1
[2024-05-17 08:16:07] -rw------- 1 boinc boinc      7762 May 17 08:15 heartbeat.json
[2024-05-17 08:16:07] -rw------- 1 boinc boinc        95 May 17 08:15 pilot_heartbeat.json
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc        27 May 17 08:16 wrapper_checkpoint.txt
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc      8192 May 17 08:16 boinc_mmap_file
[2024-05-17 08:16:07] -rw------- 1 boinc boinc      4405 May 17 08:16 pilotlog.txt
[2024-05-17 08:16:07] -rw------- 1 boinc boinc    620463 May 17 08:16 log.38776104._008563.job.log.1
[2024-05-17 08:16:07] -rw------- 1 boinc boinc       357 May 17 08:16 output.list
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc       620 May 17 08:16 runtime_log
[2024-05-17 08:16:07] -rw------- 1 boinc boinc    962560 May 17 08:16 result.tar.gz
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc     11284 May 17 08:16 runtime_log.err
[2024-05-17 08:16:07] -rw------- 1 boinc boinc       653 May 17 08:16 Q6ULDm5ZaR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmcmJKDmjyLkSo.diag
[2024-05-17 08:16:07] -rw-r--r-- 1 boinc boinc     21850 May 17 08:16 stderr.txt
[2024-05-17 08:16:07] HITS file was successfully produced:
[2024-05-17 08:16:07] -rw------- 1 boinc boinc 224935990 May 17 08:15 shared/HITS.pool.root.1
[2024-05-17 08:16:07]  *** Contents of shared directory: ***
[2024-05-17 08:16:07] total 809380
[2024-05-17 08:16:07] -rw-r--r-- 2 boinc boinc 602389987 May 17 06:26 ATLAS.root_0
[2024-05-17 08:16:07] -rw-r--r-- 2 boinc boinc    480000 May 17 06:26 input.tar.gz
[2024-05-17 08:16:07] -rw-r--r-- 2 boinc boinc     17537 May 17 06:26 start_atlas.sh
[2024-05-17 08:16:07] -rw------- 1 boinc boinc 224935990 May 17 08:15 HITS.pool.root.1
[2024-05-17 08:16:07] -rw------- 1 boinc boinc    962560 May 17 08:16 result.tar.gz
08:16:09 (16637): run_atlas exited; CPU time 36604.745686
08:16:09 (16637): called boinc_finish(0)

</stderr_txt>
]]>

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