Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:33:10 (2502130): wrapper (7.7.26015): starting
16:33:10 (2502130): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 16:33:10] Arguments: --nthreads 12
[2024-05-17 16:33:10] Threads: 12
[2024-05-17 16:33:10] Checking for CVMFS
[2024-05-17 16:33:10] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 16:33:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 16:33:10] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 16:33:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 16:33:10] 2.11.3.0 11199 11804 98760 132844 1 56 42658400 46080000 911 130560 0 14286464 99.948 1840504 35316 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2024-05-17 16:33:10] CVMFS is ok
[2024-05-17 16:33:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 16:33:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 16:33:10] Further information can be found at the LHC@home message board.
[2024-05-17 16:33:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 16:33:10] Checking for apptainer binary...
[2024-05-17 16:33:10] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 16:33:10] Running /usr/bin/apptainer --version
[2024-05-17 16:33:10] apptainer version 1.3.1-1.el7
[2024-05-17 16:33:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 16:33:10] minis01.farm.particle.cz
[2024-05-17 16:33:10] apptainer works
[2024-05-17 16:33:10] Set ATHENA_PROC_NUMBER=12
[2024-05-17 16:33:10] Set ATHENA_CORE_NUMBER=12
[2024-05-17 16:33:10] Starting ATLAS job with PandaID=6206926011
[2024-05-17 16:33:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 17:36:20]  *** The last 200 lines of the pilot log: ***
[2024-05-17 17:36:21]  filetype=log
[2024-05-17 17:36:21]  guid=329b7ec8-120c-4077-a290-771dddf17b4c
[2024-05-17 17:36:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 17:36:21]  is_tar=False
[2024-05-17 17:36:21]  lfn=log.38776104._008469.job.log.tgz.1
[2024-05-17 17:36:21]  mtime=0
[2024-05-17 17:36:21]  protocol_id=None
[2024-05-17 17:36:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 17:36:21]  replicas=None
[2024-05-17 17:36:21]  scope=mc23_13p6TeV
[2024-05-17 17:36:21]  status=None
[2024-05-17 17:36:21]  status_code=0
[2024-05-17 17:36:21]  storage_token=
[2024-05-17 17:36:21]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6206926011/log.38776104._008469.job.log.tgz.1
[2024-05-17 17:36:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/dc/log.38776104._008469.job.log.tgz.1
[2024-05-17 17:36:21]  workdir=None
[2024-05-17 17:36:21] ]
[2024-05-17 17:36:21] 2024-05-17 15:35:54,459 | INFO     | transferring file log.38776104._008469.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6206926011/log.38776104._008469.job.log.tgz.1 to /scratch/.boinc/slot
[2024-05-17 17:36:21] 2024-05-17 15:35:54,460 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6206926011/log.38776104._008469.job.log.tgz.1 /scratch/.boinc/slots/1/log.38776104._008469.j
[2024-05-17 17:36:21] 2024-05-17 15:35:54,475 | INFO     | adding to output.list: log.38776104._008469.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/dc/log.38776104._008469.job.log.tg
[2024-05-17 17:36:21] 2024-05-17 15:35:54,476 | INFO     | summary of transferred files:
[2024-05-17 17:36:21] 2024-05-17 15:35:54,476 | INFO     |  -- lfn=log.38776104._008469.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 17:36:21] 2024-05-17 15:35:54,476 | INFO     | stage-out finished correctly
[2024-05-17 17:36:21] 2024-05-17 15:35:54,550 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 17:36:21] 2024-05-17 15:35:55,918 | WARNING  | process 2513783 is no longer using CPU - aborting
[2024-05-17 17:36:21] 2024-05-17 15:35:55,919 | INFO     | will not send any job update
[2024-05-17 17:36:21] 2024-05-17 15:35:56,657 | INFO     | job 6206926011 has state=finished
[2024-05-17 17:36:21] 2024-05-17 15:35:56,658 | INFO     | preparing for final server update for job 6206926011 in state='finished'
[2024-05-17 17:36:21] 2024-05-17 15:35:56,658 | INFO     | this job has now completed (state=finished)
[2024-05-17 17:36:21] 2024-05-17 15:35:56,659 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 17:36:21] 2024-05-17 15:35:56,659 | INFO     | job 6206926011 has finished - writing final server update
[2024-05-17 17:36:21] 2024-05-17 15:35:56,659 | INFO     | total number of processed events: 400 (read)
[2024-05-17 17:36:21] 2024-05-17 15:35:56,661 | INFO     | executing command: lscpu
[2024-05-17 17:36:21] 2024-05-17 15:35:56,691 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-05-17 17:36:21] 2024-05-17 15:35:56,691 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 17:36:21] 2024-05-17 15:35:56,726 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 17:36:21] 2024-05-17 15:35:58,421 | INFO     | monitor loop #298: job 0:6206926011 is in state 'finished'
[2024-05-17 17:36:21] 2024-05-17 15:35:58,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 17:36:21] 2024-05-17 15:36:00,925 | INFO     | monitor loop #299: job 0:6206926011 is in state 'finished'
[2024-05-17 17:36:21] 2024-05-17 15:36:00,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 17:36:21] 2024-05-17 15:36:01,134 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-17 17:36:21] 2024-05-17 15:36:01,134 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6206926011/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 17:36:21] 2024-05-17 15:36:01,136 | INFO     | extracted standard info from prmon json
[2024-05-17 17:36:21] 2024-05-17 15:36:01,136 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 17:36:21] 2024-05-17 15:36:01,136 | WARNING  | GPU info not found in prmon json
[2024-05-17 17:36:21] 2024-05-17 15:36:01,137 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 17:36:21] 2024-05-17 15:36:01,137 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 17:36:21] 2024-05-17 15:36:01,139 | INFO     | fitting pss+swap vs Time
[2024-05-17 17:36:21] 2024-05-17 15:36:01,140 | INFO     | model: linear, x: [1715956732.0, 1715956793.0, 1715956854.0, 1715956915.0, 1715956976.0, 1715957037.0, 1715957098.0, 1715957159.0, 1715957220.0, 1715957281.0, 1715
[2024-05-17 17:36:21] 2024-05-17 15:36:01,140 | INFO     | sum of square deviations: 51573060.0
[2024-05-17 17:36:21] 2024-05-17 15:36:01,140 | INFO     | sum of deviations: 9791673091.0
[2024-05-17 17:36:21] 2024-05-17 15:36:01,141 | INFO     | mean x: 1715958379.0
[2024-05-17 17:36:21] 2024-05-17 15:36:01,141 | INFO     | mean y: 2708427.309090909
[2024-05-17 17:36:21] 2024-05-17 15:36:01,141 | INFO     | -- intersect: -325789545996.42065
[2024-05-17 17:36:21] 2024-05-17 15:36:01,141 | INFO     | intersect: -325789545996.42065
[2024-05-17 17:36:21] 2024-05-17 15:36:01,141 | INFO     | chi2: 1.8353539670369503
[2024-05-17 17:36:21] 2024-05-17 15:36:01,142 | INFO     | -- intersect: -325789545996.42065
[2024-05-17 17:36:21] 2024-05-17 15:36:01,142 | INFO     | current memory leak: 189.86 B/s (using 55 data points, chi2=1.84)
[2024-05-17 17:36:21] 2024-05-17 15:36:01,142 | INFO     | ..............................
[2024-05-17 17:36:21] 2024-05-17 15:36:01,142 | INFO     | . Timing measurements:
[2024-05-17 17:36:21] 2024-05-17 15:36:01,143 | INFO     | . get job = 0 s
[2024-05-17 17:36:21] 2024-05-17 15:36:01,143 | INFO     | . initial setup = 1 s
[2024-05-17 17:36:21] 2024-05-17 15:36:01,143 | INFO     | . payload setup = 6 s
[2024-05-17 17:36:21] 2024-05-17 15:36:01,143 | INFO     | . stage-in = 0 s
[2024-05-17 17:36:21] 2024-05-17 15:36:01,143 | INFO     | . payload execution = 3727 s
[2024-05-17 17:36:21] 2024-05-17 15:36:01,143 | INFO     | . stage-out = 0 s
[2024-05-17 17:36:21] 2024-05-17 15:36:01,143 | INFO     | . log creation = 0 s
[2024-05-17 17:36:21] 2024-05-17 15:36:01,144 | INFO     | ..............................
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | 
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | job summary report
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | --------------------------------------------------
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | PanDA job id: 6206926011
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | task id: 38776104
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | errors: (none)
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | pilot state: finished 
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | transexitcode: 0
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | exeerrorcode: 0
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | exeerrordiag: 
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | exitcode: 0
[2024-05-17 17:36:21] 2024-05-17 15:36:01,288 | INFO     | exitmsg: OK
[2024-05-17 17:36:21] 2024-05-17 15:36:01,289 | INFO     | cpuconsumptiontime: 35432 s
[2024-05-17 17:36:21] 2024-05-17 15:36:01,289 | INFO     | nevents: 400
[2024-05-17 17:36:21] 2024-05-17 15:36:01,289 | INFO     | neventsw: 0
[2024-05-17 17:36:21] 2024-05-17 15:36:01,289 | INFO     | pid: 2513783
[2024-05-17 17:36:21] 2024-05-17 15:36:01,289 | INFO     | pgrp: 2513783
[2024-05-17 17:36:21] 2024-05-17 15:36:01,289 | INFO     | corecount: 12
[2024-05-17 17:36:21] 2024-05-17 15:36:01,289 | INFO     | event service: False
[2024-05-17 17:36:21] 2024-05-17 15:36:01,289 | INFO     | sizes: {0: 2392152, 5: 2392358, 11: 2392414, 3737: 2418123, 3738: 2427141, 3744: 2427255}
[2024-05-17 17:36:21] 2024-05-17 15:36:01,289 | INFO     | --------------------------------------------------
[2024-05-17 17:36:21] 2024-05-17 15:36:01,289 | INFO     | 
[2024-05-17 17:36:21] 2024-05-17 15:36:01,289 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2024-05-17 17:36:21] 2024-05-17 15:36:01,306 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,306 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,306 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,306 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,306 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | job 6206926011 has completed (purged errors)
[2024-05-17 17:36:21] 2024-05-17 15:36:01,307 | INFO     | overall cleanup function is called
[2024-05-17 17:36:21] 2024-05-17 15:36:02,315 | INFO     | --- collectZombieJob: --- 10, [2513783]
[2024-05-17 17:36:21] 2024-05-17 15:36:02,315 | INFO     | zombie collector waiting for pid 2513783
[2024-05-17 17:36:21] 2024-05-17 15:36:02,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 17:36:21] 2024-05-17 15:36:03,320 | INFO     | collected zombie processes
[2024-05-17 17:36:21] 2024-05-17 15:36:03,321 | INFO     | will now attempt to kill all subprocesses of pid=2513783
[2024-05-17 17:36:21] 2024-05-17 15:36:03,402 | INFO     | process IDs to be killed: [2513783] (in reverse order)
[2024-05-17 17:36:21] 2024-05-17 15:36:03,456 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 17:36:21] 2024-05-17 15:36:03,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 17:36:21] 2024-05-17 15:36:03,465 | INFO     | did not find any defunct processes belonging to 2513783
[2024-05-17 17:36:21] 2024-05-17 15:36:03,472 | INFO     | did not find any defunct processes belonging to 2513783
[2024-05-17 17:36:21] 2024-05-17 15:36:03,473 | INFO     | ready for new job
[2024-05-17 17:36:21] 2024-05-17 15:36:03,473 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 17:36:21] 2024-05-17 15:36:03,474 | INFO     | *************************************
[2024-05-17 17:36:21] 2024-05-17 15:36:03,474 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 17:36:21] 2024-05-17 15:36:03,474 | INFO     | *************************************
[2024-05-17 17:36:21] 2024-05-17 15:36:03,474 | INFO     | 
[2024-05-17 17:36:21] 2024-05-17 15:36:03,476 | INFO     | architecture information:
[2024-05-17 17:36:21] 2024-05-17 15:36:03,477 | INFO     | executing command: cat /etc/os-release
[2024-05-17 17:36:21] 2024-05-17 15:36:03,489 | INFO     | cat /etc/os-release:
[2024-05-17 17:36:21] NAME="CentOS Linux"
[2024-05-17 17:36:21] VERSION="7 (Core)"
[2024-05-17 17:36:21] ID="centos"
[2024-05-17 17:36:21] ID_LIKE="rhel fedora"
[2024-05-17 17:36:21] VERSION_ID="7"
[2024-05-17 17:36:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 17:36:21] ANSI_COLOR="0;31"
[2024-05-17 17:36:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 17:36:21] HOME_URL="https://www.centos.org/"
[2024-05-17 17:36:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 17:36:21] 
[2024-05-17 17:36:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 17:36:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 17:36:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 17:36:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 17:36:21] 
[2024-05-17 17:36:21] 2024-05-17 15:36:03,490 | INFO     | *************************************
[2024-05-17 17:36:21] 2024-05-17 15:36:03,993 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2024-05-17 17:36:21] 2024-05-17 15:36:04,007 | INFO     | sufficient remaining disk space (709169774592 B)
[2024-05-17 17:36:21] 2024-05-17 15:36:04,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 17:36:21] 2024-05-17 15:36:04,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 17:36:21] 2024-05-17 15:36:04,008 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 17:36:21] 2024-05-17 15:36:04,009 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 17:36:21] 2024-05-17 15:36:04,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 17:36:21] 2024-05-17 15:36:04,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 17:36:21] 2024-05-17 15:36:04,292 | INFO     | all data control threads have been joined
[2024-05-17 17:36:21] 2024-05-17 15:36:04,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 17:36:21] 2024-05-17 15:36:04,434 | INFO     | aborting loop
[2024-05-17 17:36:21] 2024-05-17 15:36:04,484 | INFO     | all payload control threads have been joined
[2024-05-17 17:36:21] 2024-05-17 15:36:04,860 | INFO     | all job control threads have been joined
[2024-05-17 17:36:21] 2024-05-17 15:36:05,013 | INFO     | [job] retrieve thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:05,057 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:05,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 17:36:21] 2024-05-17 15:36:05,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 17:36:21] 2024-05-17 15:36:05,297 | INFO     | [data] control thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:05,439 | INFO     | [job] job monitor thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:05,459 | INFO     | [data] copytool_in thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:05,490 | INFO     | [payload] control thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:05,865 | INFO     | [job] control thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:05,874 | INFO     | [payload] validate_post thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:06,071 | INFO     | [payload] failed_post thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:06,248 | INFO     | [job] validate thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:06,298 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 17:36:21] 2024-05-17 15:36:06,439 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:06,460 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:07,068 | INFO     | [data] copytool_out thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:07,304 | INFO     | [job] queue monitor thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:09,126 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:14,498 | INFO     | job.realtimelogging is not enabled
[2024-05-17 17:36:21] 2024-05-17 15:36:15,504 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 17:36:21] 2024-05-17 15:36:15,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515128932160)>', '<ExcThread(monitor, started 140514342987520)>']
[2024-05-17 17:36:21] 2024-05-17 15:36:16,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 17:36:21] 2024-05-17 15:36:16,070 | INFO     | [monitor] control thread has ended
[2024-05-17 17:36:21] 2024-05-17 15:36:20,739 | INFO     | all workflow threads have been joined
[2024-05-17 17:36:21] 2024-05-17 15:36:20,740 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 17:36:21] 2024-05-17 15:36:20,740 | INFO     | traces error code: 0
[2024-05-17 17:36:21] 2024-05-17 15:36:20,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 17:36:21] 2024-05-17 15:36:20,844 [wrapper] ==== pilot stdout END ====
[2024-05-17 17:36:21] 2024-05-17 15:36:20,847 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 17:36:21] 2024-05-17 15:36:20,850 [wrapper] pilotpid: 2506690
[2024-05-17 17:36:21] 2024-05-17 15:36:20,852 [wrapper] Pilot exit status: 0
[2024-05-17 17:36:21] 2024-05-17 15:36:20,863 [wrapper] pandaids: 6206926011
[2024-05-17 17:36:21] 2024-05-17 15:36:20,899 [wrapper] cleanup: SIGTERM to supervisor_pilot 2582951 2506691
[2024-05-17 17:36:21] 2024-05-17 15:36:20,901 [wrapper] Test setup, not cleaning
[2024-05-17 17:36:21] 2024-05-17 15:36:20,903 [wrapper] ==== wrapper stdout END ====
[2024-05-17 17:36:21] 2024-05-17 15:36:20,905 [wrapper] ==== wrapper stderr END ====
[2024-05-17 17:36:21] 2024-05-17 15:36:20,909 [wrapper] apfmon messages muted
[2024-05-17 17:36:21]  *** Error codes and diagnostics ***
[2024-05-17 17:36:21]     "exeErrorCode": 0,
[2024-05-17 17:36:21]     "exeErrorDiag": "",
[2024-05-17 17:36:21]     "pilotErrorCode": 0,
[2024-05-17 17:36:21]     "pilotErrorDiag": "",
[2024-05-17 17:36:21]  *** Listing of results directory ***
[2024-05-17 17:36:21] total 819868
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc    467845 May 15 22:11 pilot3.tar.gz
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc      5633 May 15 22:30 queuedata.json
[2024-05-17 17:36:21] -rwx------ 1 boinc boinc     32251 May 15 22:30 runpilot2-wrapper.sh
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc       100 May 17 16:33 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 17:36:21] -rwxr-xr-x 1 boinc boinc      7986 May 17 16:33 run_atlas
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc       105 May 17 16:33 job.xml
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc      6528 May 17 16:33 init_data.xml
[2024-05-17 17:36:21] -rw-r--r-- 2 boinc boinc 602049504 May 17 16:33 EVNT.38776100._000339.pool.root.1
[2024-05-17 17:36:21] -rw-r--r-- 2 boinc boinc     17537 May 17 16:33 start_atlas.sh
[2024-05-17 17:36:21] drwxrwx--x 2 boinc boinc      4096 May 17 16:33 shared
[2024-05-17 17:36:21] -rw-r--r-- 2 boinc boinc    480002 May 17 16:33 input.tar.gz
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc         0 May 17 16:33 boinc_lockfile
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc      2640 May 17 16:33 pandaJob.out
[2024-05-17 17:36:21] -rw------- 1 boinc boinc       424 May 17 16:33 setup.sh.local
[2024-05-17 17:36:21] -rw------- 1 boinc boinc   1019402 May 17 16:33 agis_schedconf.cvmfs.json
[2024-05-17 17:36:21] -rw------- 1 boinc boinc         0 May 17 16:33 agis_ddmendpoints.agis.ALL.json
[2024-05-17 17:36:21] -rw------- 1 boinc boinc   1324701 May 17 16:33 cric_ddmendpoints.json
[2024-05-17 17:36:21] drwx------ 4 boinc boinc      4096 May 17 16:33 pilot3
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc       530 May 17 17:35 boinc_task_state.xml
[2024-05-17 17:36:21] -rw------- 1 boinc boinc 232461876 May 17 17:35 HITS.38776104._008469.pool.root.1
[2024-05-17 17:36:21] -rw------- 1 boinc boinc        95 May 17 17:35 pilot_heartbeat.json
[2024-05-17 17:36:21] -rw------- 1 boinc boinc      1035 May 17 17:35 memory_monitor_summary.json
[2024-05-17 17:36:21] -rw------- 1 boinc boinc    359712 May 17 17:35 log.38776104._008469.job.log.tgz.1
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc        27 May 17 17:35 wrapper_checkpoint.txt
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc      8192 May 17 17:35 boinc_mmap_file
[2024-05-17 17:36:21] -rw------- 1 boinc boinc      7719 May 17 17:36 heartbeat.json
[2024-05-17 17:36:21] -rw------- 1 boinc boinc      4408 May 17 17:36 pilotlog.txt
[2024-05-17 17:36:21] -rw------- 1 boinc boinc    392067 May 17 17:36 log.38776104._008469.job.log.1
[2024-05-17 17:36:21] -rw------- 1 boinc boinc       357 May 17 17:36 output.list
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc       620 May 17 17:36 runtime_log
[2024-05-17 17:36:21] -rw------- 1 boinc boinc    768000 May 17 17:36 result.tar.gz
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc     11064 May 17 17:36 runtime_log.err
[2024-05-17 17:36:21] -rw------- 1 boinc boinc       659 May 17 17:36 iFzKDm5RaR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmelJKDm8e49qm.diag
[2024-05-17 17:36:21] -rw-r--r-- 1 boinc boinc     21361 May 17 17:36 stderr.txt
[2024-05-17 17:36:21] HITS file was successfully produced:
[2024-05-17 17:36:21] -rw------- 1 boinc boinc 232461876 May 17 17:35 shared/HITS.pool.root.1
[2024-05-17 17:36:21]  *** Contents of shared directory: ***
[2024-05-17 17:36:21] total 816208
[2024-05-17 17:36:21] -rw-r--r-- 2 boinc boinc 602049504 May 17 16:33 ATLAS.root_0
[2024-05-17 17:36:21] -rw-r--r-- 2 boinc boinc     17537 May 17 16:33 start_atlas.sh
[2024-05-17 17:36:21] -rw-r--r-- 2 boinc boinc    480002 May 17 16:33 input.tar.gz
[2024-05-17 17:36:21] -rw------- 1 boinc boinc 232461876 May 17 17:35 HITS.pool.root.1
[2024-05-17 17:36:21] -rw------- 1 boinc boinc    768000 May 17 17:36 result.tar.gz
17:36:23 (2502130): run_atlas exited; CPU time 35185.079371
17:36:23 (2502130): called boinc_finish(0)

</stderr_txt>
]]>

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