Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-16 16:18:00 (11179): Detected: vboxwrapper 26206
2024-05-16 16:18:00 (11179): Detected: BOINC client v7.24.1
2024-05-16 16:18:00 (11179): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2024-05-16 16:18:00 (11179): Successfully copied 'init_data.xml' to the shared directory.
2024-05-16 16:18:00 (11179): Create VM. (boinc_ff3053b4cf142e04, slot#0)
2024-05-16 16:18:01 (11179): Setting Memory Size for VM. (4400MB)
2024-05-16 16:18:01 (11179): Setting CPU Count for VM. (4)
2024-05-16 16:18:01 (11179): Setting Chipset Options for VM.
2024-05-16 16:18:01 (11179): Setting Graphics Controller Options for VM.
2024-05-16 16:18:01 (11179): Setting Boot Options for VM.
2024-05-16 16:18:01 (11179): Setting Network Configuration for NAT.
2024-05-16 16:18:01 (11179): Enabling VM Network Access.
2024-05-16 16:18:02 (11179): Disabling USB Support for VM.
2024-05-16 16:18:02 (11179): Disabling COM Port Support for VM.
2024-05-16 16:18:02 (11179): Disabling LPT Port Support for VM.
2024-05-16 16:18:02 (11179): Disabling Audio Support for VM.
2024-05-16 16:18:02 (11179): Disabling Clipboard Support for VM.
2024-05-16 16:18:02 (11179): Disabling Drag and Drop Support for VM.
2024-05-16 16:18:02 (11179): Adding storage controller(s) to VM.
2024-05-16 16:18:02 (11179): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-16 16:18:04 (11179): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-16 16:18:04 (11179): forwarding host port 50869 to guest port 80
2024-05-16 16:18:04 (11179): Enabling remote desktop for VM.
2024-05-16 16:18:04 (11179): Required extension pack not installed, remote desktop not enabled.
2024-05-16 16:18:04 (11179): Enabling shared directory for VM.
2024-05-16 16:18:04 (11179): Starting VM using VBoxManage interface. (boinc_ff3053b4cf142e04, slot#0)
2024-05-16 16:18:06 (11179): Successfully started VM. (PID = '11437')
2024-05-16 16:18:06 (11179): Reporting VM Process ID to BOINC.
2024-05-16 16:18:06 (11179): Guest Log: BIOS: VirtualBox 7.0.14
2024-05-16 16:18:06 (11179): Guest Log: CPUID EDX: 0x178bfbff
2024-05-16 16:18:06 (11179): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-16 16:18:06 (11179): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-16 16:18:06 (11179): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-16 16:18:06 (11179): Detected: Web Application Enabled (http://localhost:50869)
2024-05-16 16:18:06 (11179): Preference change detected
2024-05-16 16:18:06 (11179): Setting CPU throttle for VM. (50%)
2024-05-16 16:18:06 (11179): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-16 16:18:08 (11179): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-16 16:18:08 (11179): Guest Log: BIOS: Booting from Hard Disk...
2024-05-16 16:18:11 (11179): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-16 16:18:11 (11179): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-16 16:18:11 (11179): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-16 16:18:22 (11179): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-16 16:18:22 (11179): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-16 16:18:44 (11179): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-16 16:18:44 (11179): Guest Log: 00:00:00.000363 main     Log opened 2024-05-16T14:18:42.568207000Z
2024-05-16 16:18:44 (11179): Guest Log: 00:00:00.000519 main     OS Product: Linux
2024-05-16 16:18:44 (11179): Guest Log: 00:00:00.000573 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-16 16:18:44 (11179): Guest Log: 00:00:00.000614 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-16 16:18:44 (11179): Guest Log: 00:00:00.000667 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-16 16:18:44 (11179): Guest Log: 00:00:00.000668 main     Process ID: 1294
2024-05-16 16:18:44 (11179): Guest Log: 00:00:00.000669 main     Package type: LINUX_64BITS_GENERIC
2024-05-16 16:18:44 (11179): Guest Log: 00:00:00.005689 main     5.2.32 r132073 started. Verbose level = 0
2024-05-16 16:18:44 (11179): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-16 16:18:44 (11179): Guest Log: [INFO] Mounting shared directory
2024-05-16 16:18:44 (11179): Guest Log: [INFO] Checking for init_data.xml
2024-05-16 16:18:56 (11179): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-16 16:18:56 (11179): Guest Log: [INFO] Detected branch: prod
2024-05-16 16:18:56 (11179): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-16 16:18:56 (11179): Guest Log: Copying input files
2024-05-16 16:19:01 (11179): Guest Log: Copied input files into RunAtlas.
2024-05-16 16:19:02 (11179): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-16 16:19:02 (11179): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-16 16:19:02 (11179): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-16 16:19:02 (11179): Guest Log: Further information can be found at the LHC@home message board.
2024-05-16 16:19:12 (11179): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-16 16:19:12 (11179): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-16 16:19:12 (11179): Guest Log: 2.6.3.0 1571 0 32216 132800 4 1 3116989 4096000 0 65024 0 0 n/a 1 2 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-05-16 16:19:17 (11179): Guest Log: copied the webapp to /var/www
2024-05-16 16:19:17 (11179): Guest Log: ATHENA_PROC_NUMBER=4
2024-05-16 16:19:17 (11179): Guest Log: ATHENA_CORE_NUMBER=4
2024-05-16 16:19:18 (11179): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-16 16:19:18 (11179): Guest Log:  *** Starting ATLAS job. (PandaID=6206925987 taskID=38776104) ***
2024-05-16 17:57:06 (11179): Status Report: Elapsed Time: '6000.000000'
2024-05-16 17:57:06 (11179): Status Report: CPU Time: '10302.130000'
2024-05-16 19:00:23 (11179): Guest Log:  *** Job finished ***
2024-05-16 19:00:23 (11179): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:14,167 | INFO     | [job] queue monitor thread has finished
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:14,199 | INFO     | [data] copytool_out thread has finished
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:15,170 | INFO     | [data] queue_monitor thread has finished
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:16,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293399312192)>', '<ExcThread(monitor, started 140292741125888)>']
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:16,935 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:16,935 | INFO     | [monitor] control thread has ended
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:21,605 | INFO     | all workflow threads have been joined
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:21,606 | INFO     | end of generic workflow (traces error code: 0)
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:21,606 | INFO     | traces error code: 0
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:21,607 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:21,742 [wrapper] ==== pilot stdout END ====
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:21,760 [wrapper] ==== wrapper stdout RESUME ====
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:21,779 [wrapper] pilotpid: 6467
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:21,796 [wrapper] Pilot exit status: 0
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:21,973 [wrapper] pandaids: 6206925987
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:22,054 [wrapper] cleanup: SIGTERM to supervisor_pilot  6576 6468
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:22,058 [wrapper] Test setup, not cleaning
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:22,062 [wrapper] ==== wrapper stdout END ====
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:22,101 [wrapper] ==== wrapper stderr END ====
2024-05-16 19:00:23 (11179): Guest Log: 2024-05-16 17:00:22,137 [wrapper] apfmon messages muted
2024-05-16 19:00:23 (11179): Guest Log:  *** Error codes and diagnostics ***
2024-05-16 19:00:23 (11179): Guest Log:     "exeErrorCode": 0,
2024-05-16 19:00:23 (11179): Guest Log:     "exeErrorDiag": "",
2024-05-16 19:00:23 (11179): Guest Log:     "pilotErrorCode": 0,
2024-05-16 19:00:23 (11179): Guest Log:     "pilotErrorDiag": "",
2024-05-16 19:00:23 (11179): Guest Log:  *** Listing of results directory ***
2024-05-16 19:00:23 (11179): Guest Log: total 235308
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 atlas atlas    467845 May 15 20:11 pilot3.tar.gz
2024-05-16 19:00:23 (11179): Guest Log: -rwx------. 1 atlas atlas     32251 May 15 20:27 runpilot2-wrapper.sh
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 15 20:27 queuedata.json
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 atlas atlas    480006 May 16 14:18 input.tar.gz
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 atlas atlas     17537 May 16 14:18 start_atlas.sh
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 atlas atlas      6657 May 16 14:18 init_data.xml
2024-05-16 19:00:23 (11179): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 16 14:19 EVNT.38776100._000338.pool.root.1 -> /data/./ATLAS.root_0
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 atlas atlas      2641 May 16 14:19 pandaJob.out
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas       424 May 16 14:19 setup.sh.local
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas   1014167 May 16 14:20 agis_schedconf.cvmfs.json
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas         0 May 16 14:20 agis_ddmendpoints.agis.ALL.json
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas   1324701 May 16 14:20 cric_ddmendpoints.json
2024-05-16 19:00:23 (11179): Guest Log: drwx------. 4 atlas atlas      4096 May 16 14:20 pilot3
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas 235939442 May 16 16:59 HITS.38776104._008447.pool.root.1
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas        95 May 16 16:59 pilot_heartbeat.json
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas      1033 May 16 16:59 memory_monitor_summary.json
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas    266447 May 16 16:59 log.38776104._008447.job.log.tgz.1
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas      7740 May 16 17:00 heartbeat.json
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas      4271 May 16 17:00 pilotlog.txt
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas    515333 May 16 17:00 log.38776104._008447.job.log.1
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas       357 May 16 17:00 output.list
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 16 17:00 runtime_log
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas    798720 May 16 17:00 result.tar.gz
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas       673 May 16 17:00 uTVLDmzOaR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmdkOKDmbrHeOo.diag
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 atlas atlas     11020 May 16 17:00 runtime_log.err
2024-05-16 19:00:23 (11179): Guest Log: Looking for outputfile HITS.38776104._008447.pool.root.1
2024-05-16 19:00:23 (11179): Guest Log: HITS file was successfully produced
2024-05-16 19:00:23 (11179): Guest Log: -rw-------. 1 atlas atlas 235939442 May 16 16:59 /home/atlas/RunAtlas/HITS.38776104._008447.pool.root.1
2024-05-16 19:00:23 (11179): Guest Log: Successfully finished the ATLAS job!
2024-05-16 19:00:23 (11179): Guest Log: Copying the results back to the shared directory!
2024-05-16 19:00:23 (11179): Guest Log:  *** Contents of shared directory: ***
2024-05-16 19:00:23 (11179): Guest Log: total 585248
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 root root 597977793 May 16 14:18 ATLAS.root_0
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 root root      6657 May 16 14:18 init_data.xml
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 root root    480006 May 16 14:18 input.tar.gz
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 root root    798720 May 16 17:00 result.tar.gz
2024-05-16 19:00:23 (11179): Guest Log: -rw-r--r--. 1 root root     17537 May 16 14:18 start_atlas.sh
2024-05-16 19:00:23 (11179): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-16 19:00:23 (11179): VM Completion File Detected.
2024-05-16 19:00:23 (11179): Powering off VM.
2024-05-16 19:00:24 (11179): Successfully stopped VM.
2024-05-16 19:00:24 (11179): Deregistering VM. (boinc_ff3053b4cf142e04, slot#0)
2024-05-16 19:00:24 (11179): Removing network bandwidth throttle group from VM.
2024-05-16 19:00:24 (11179): Removing VM from VirtualBox.
19:00:29 (11179): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN