Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:03:14 (1116249): wrapper (7.7.26015): starting
20:03:14 (1116249): wrapper: running run_atlas (--nthreads 8)
[2024-05-15 20:03:14] Arguments: --nthreads 8
[2024-05-15 20:03:14] Threads: 8
[2024-05-15 20:03:14] Checking for CVMFS
[2024-05-15 20:03:14] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 20:03:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 20:03:14] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 20:03:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 20:03:14] 2.11.2.0 911815 4348 77812 132778 2 196 9410630 18432000 4482 130560 0 19171802 99.970 1857449 8509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-15 20:03:14] CVMFS is ok
[2024-05-15 20:03:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 20:03:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 20:03:14] Further information can be found at the LHC@home message board.
[2024-05-15 20:03:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 20:03:14] Checking for apptainer binary...
[2024-05-15 20:03:14] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 20:03:14] Running /usr/bin/apptainer --version
[2024-05-15 20:03:14] apptainer version 1.2.4-1.el7
[2024-05-15 20:03:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 20:03:15] gc-9-36.aglt2.org
[2024-05-15 20:03:15] apptainer works
[2024-05-15 20:03:15] Set ATHENA_PROC_NUMBER=8
[2024-05-15 20:03:15] Set ATHENA_CORE_NUMBER=8
[2024-05-15 20:03:15] Starting ATLAS job with PandaID=6206925895
[2024-05-15 20:03:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 21:41:13]  *** The last 200 lines of the pilot log: ***
[2024-05-15 21:41:13]  filesize=318416
[2024-05-15 21:41:13]  filetype=log
[2024-05-15 21:41:13]  guid=de4db5eb-9d1a-4367-8877-e3400809dcd5
[2024-05-15 21:41:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-15 21:41:13]  is_tar=False
[2024-05-15 21:41:13]  lfn=log.38776104._008367.job.log.tgz.1
[2024-05-15 21:41:13]  mtime=0
[2024-05-15 21:41:13]  protocol_id=None
[2024-05-15 21:41:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-15 21:41:13]  replicas=None
[2024-05-15 21:41:13]  scope=mc23_13p6TeV
[2024-05-15 21:41:13]  status=None
[2024-05-15 21:41:13]  status_code=0
[2024-05-15 21:41:13]  storage_token=
[2024-05-15 21:41:13]  surl=/data/boinchome/slots/4/PanDA_Pilot-6206925895/log.38776104._008367.job.log.tgz.1
[2024-05-15 21:41:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/70/log.38776104._008367.job.log.tgz.1
[2024-05-15 21:41:13]  workdir=None
[2024-05-15 21:41:13] ]
[2024-05-15 21:41:13] 2024-05-16 01:40:44,071 | INFO     | transferring file log.38776104._008367.job.log.tgz.1 from /data/boinchome/slots/4/PanDA_Pilot-6206925895/log.38776104._008367.job.log.tgz.1 to /data/boinchome/slot
[2024-05-15 21:41:13] 2024-05-16 01:40:44,071 | INFO     | executing command: /usr/bin/env mv /data/boinchome/slots/4/PanDA_Pilot-6206925895/log.38776104._008367.job.log.tgz.1 /data/boinchome/slots/4/log.38776104._008367.j
[2024-05-15 21:41:13] 2024-05-16 01:40:44,087 | INFO     | adding to output.list: log.38776104._008367.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/70/log.38776104._008367.job.log.tg
[2024-05-15 21:41:13] 2024-05-16 01:40:44,087 | INFO     | summary of transferred files:
[2024-05-15 21:41:13] 2024-05-16 01:40:44,087 | INFO     |  -- lfn=log.38776104._008367.job.log.tgz.1, status_code=0, status=transferred
[2024-05-15 21:41:13] 2024-05-16 01:40:44,088 | INFO     | stage-out finished correctly
[2024-05-15 21:41:13] 2024-05-16 01:40:45,358 | INFO     | monitor loop #446: job 0:6206925895 is in state 'finished'
[2024-05-15 21:41:13] 2024-05-16 01:40:45,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 21:41:13] 2024-05-16 01:40:47,067 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-15 21:41:13] 2024-05-16 01:40:47,861 | INFO     | monitor loop #447: job 0:6206925895 is in state 'finished'
[2024-05-15 21:41:13] 2024-05-16 01:40:47,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 21:41:13] 2024-05-16 01:40:48,178 | INFO     | job 6206925895 has state=finished
[2024-05-15 21:41:13] 2024-05-16 01:40:48,178 | INFO     | preparing for final server update for job 6206925895 in state='finished'
[2024-05-15 21:41:13] 2024-05-16 01:40:48,179 | INFO     | this job has now completed (state=finished)
[2024-05-15 21:41:13] 2024-05-16 01:40:48,179 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-15 21:41:13] 2024-05-16 01:40:48,179 | INFO     | job 6206925895 has finished - writing final server update
[2024-05-15 21:41:13] 2024-05-16 01:40:48,179 | INFO     | total number of processed events: 400 (read)
[2024-05-15 21:41:13] 2024-05-16 01:40:48,181 | INFO     | executing command: lscpu
[2024-05-15 21:41:13] 2024-05-16 01:40:48,219 | INFO     | found 24 cores (12 cores per socket, 2 sockets)
[2024-05-15 21:41:13] 2024-05-16 01:40:48,220 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-15 21:41:13] 2024-05-16 01:40:48,257 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-15 21:41:13] 2024-05-16 01:40:50,364 | INFO     | monitor loop #448: job 0:6206925895 is in state 'finished'
[2024-05-15 21:41:13] 2024-05-16 01:40:50,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 21:41:13] 2024-05-16 01:40:51,652 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-15 21:41:13] 2024-05-16 01:40:51,652 | INFO     | using path: /data/boinchome/slots/4/PanDA_Pilot-6206925895/memory_monitor_summary.json (trf name=prmon)
[2024-05-15 21:41:13] 2024-05-16 01:40:51,653 | INFO     | extracted standard info from prmon json
[2024-05-15 21:41:13] 2024-05-16 01:40:51,653 | INFO     | extracted standard memory fields from prmon json
[2024-05-15 21:41:13] 2024-05-16 01:40:51,653 | WARNING  | GPU info not found in prmon json
[2024-05-15 21:41:13] 2024-05-16 01:40:51,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-15 21:41:13] 2024-05-16 01:40:51,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-15 21:41:13] 2024-05-16 01:40:51,655 | INFO     | fitting pss+swap vs Time
[2024-05-15 21:41:13] 2024-05-16 01:40:51,655 | INFO     | model: linear, x: [1715818162.0, 1715818223.0, 1715818284.0, 1715818345.0, 1715818406.0, 1715818467.0, 1715818528.0, 1715818589.0, 1715818650.0, 1715818711.0, 1715
[2024-05-15 21:41:13] 2024-05-16 01:40:51,655 | INFO     | sum of square deviations: 211285822.0
[2024-05-15 21:41:13] 2024-05-16 01:40:51,655 | INFO     | sum of deviations: 5104694201.5
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | mean x: 1715820815.5
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | mean y: 2526743.215909091
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | -- intersect: -41451937568.6197
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | intersect: -41451937568.6197
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | chi2: 0.4154216354116348
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | -- intersect: -41451937568.6197
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | current memory leak: 24.16 B/s (using 88 data points, chi2=0.42)
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | ..............................
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | . Timing measurements:
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | . get job = 0 s
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | . initial setup = 1 s
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | . payload setup = 8 s
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | . stage-in = 0 s
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | . payload execution = 5792 s
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | . stage-out = 0 s
[2024-05-15 21:41:13] 2024-05-16 01:40:51,656 | INFO     | . log creation = 0 s
[2024-05-15 21:41:13] 2024-05-16 01:40:51,657 | INFO     | ..............................
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | 
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | job summary report
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | --------------------------------------------------
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | PanDA job id: 6206925895
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | task id: 38776104
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | errors: (none)
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | pilot state: finished 
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | transexitcode: 0
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | exeerrorcode: 0
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | exeerrordiag: 
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | exitcode: 0
[2024-05-15 21:41:13] 2024-05-16 01:40:51,719 | INFO     | exitmsg: OK
[2024-05-15 21:41:13] 2024-05-16 01:40:51,720 | INFO     | cpuconsumptiontime: 37111 s
[2024-05-15 21:41:13] 2024-05-16 01:40:51,720 | INFO     | nevents: 400
[2024-05-15 21:41:13] 2024-05-16 01:40:51,720 | INFO     | neventsw: 0
[2024-05-15 21:41:13] 2024-05-16 01:40:51,720 | INFO     | pid: 1129065
[2024-05-15 21:41:13] 2024-05-16 01:40:51,720 | INFO     | pgrp: 1129065
[2024-05-15 21:41:13] 2024-05-16 01:40:51,720 | INFO     | corecount: 8
[2024-05-15 21:41:13] 2024-05-16 01:40:51,720 | INFO     | event service: False
[2024-05-15 21:41:13] 2024-05-16 01:40:51,720 | INFO     | sizes: {0: 2392032, 1: 2392231, 11: 2392231, 12: 2392465, 22: 2392493, 5805: 2419088, 5806: 2428050, 5809: 2428106, 5814: 2428276}
[2024-05-15 21:41:13] 2024-05-16 01:40:51,720 | INFO     | --------------------------------------------------
[2024-05-15 21:41:13] 2024-05-16 01:40:51,720 | INFO     | 
[2024-05-15 21:41:13] 2024-05-16 01:40:51,720 | INFO     | executing command: ls -lF /data/boinchome/slots/4
[2024-05-15 21:41:13] 2024-05-16 01:40:51,739 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,739 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,739 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,739 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | job 6206925895 has completed (purged errors)
[2024-05-15 21:41:13] 2024-05-16 01:40:51,740 | INFO     | overall cleanup function is called
[2024-05-15 21:41:13] 2024-05-16 01:40:52,748 | INFO     | --- collectZombieJob: --- 10, [1129065]
[2024-05-15 21:41:13] 2024-05-16 01:40:52,748 | INFO     | zombie collector waiting for pid 1129065
[2024-05-15 21:41:13] 2024-05-16 01:40:52,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 21:41:13] 2024-05-16 01:40:53,753 | INFO     | collected zombie processes
[2024-05-15 21:41:13] 2024-05-16 01:40:53,753 | INFO     | will now attempt to kill all subprocesses of pid=1129065
[2024-05-15 21:41:13] 2024-05-16 01:40:53,848 | INFO     | process IDs to be killed: [1129065] (in reverse order)
[2024-05-15 21:41:13] 2024-05-16 01:40:53,932 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 21:41:13] 2024-05-16 01:40:53,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 21:41:13] 2024-05-16 01:40:53,940 | INFO     | did not find any defunct processes belonging to 1129065
[2024-05-15 21:41:13] 2024-05-16 01:40:53,944 | INFO     | did not find any defunct processes belonging to 1129065
[2024-05-15 21:41:13] 2024-05-16 01:40:53,945 | INFO     | ready for new job
[2024-05-15 21:41:13] 2024-05-16 01:40:53,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 21:41:13] 2024-05-16 01:40:53,946 | INFO     | *************************************
[2024-05-15 21:41:13] 2024-05-16 01:40:53,946 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 21:41:13] 2024-05-16 01:40:53,946 | INFO     | *************************************
[2024-05-15 21:41:13] 2024-05-16 01:40:53,946 | INFO     | 
[2024-05-15 21:41:13] 2024-05-16 01:40:53,948 | INFO     | architecture information:
[2024-05-15 21:41:13] 2024-05-16 01:40:53,948 | INFO     | executing command: cat /etc/os-release
[2024-05-15 21:41:13] 2024-05-16 01:40:53,962 | INFO     | cat /etc/os-release:
[2024-05-15 21:41:13] NAME="CentOS Linux"
[2024-05-15 21:41:13] VERSION="7 (Core)"
[2024-05-15 21:41:13] ID="centos"
[2024-05-15 21:41:13] ID_LIKE="rhel fedora"
[2024-05-15 21:41:13] VERSION_ID="7"
[2024-05-15 21:41:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 21:41:13] ANSI_COLOR="0;31"
[2024-05-15 21:41:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 21:41:13] HOME_URL="https://www.centos.org/"
[2024-05-15 21:41:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 21:41:13] 
[2024-05-15 21:41:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 21:41:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 21:41:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 21:41:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 21:41:13] 
[2024-05-15 21:41:13] 2024-05-16 01:40:53,962 | INFO     | *************************************
[2024-05-15 21:41:13] 2024-05-16 01:40:54,464 | INFO     | executing command: df -mP /data/boinchome/slots/4
[2024-05-15 21:41:13] 2024-05-16 01:40:54,489 | INFO     | sufficient remaining disk space (905079422976 B)
[2024-05-15 21:41:13] 2024-05-16 01:40:54,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 21:41:13] 2024-05-16 01:40:54,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 21:41:13] 2024-05-16 01:40:54,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 21:41:13] 2024-05-16 01:40:54,490 | INFO     | aborting loop
[2024-05-15 21:41:13] 2024-05-16 01:40:54,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 21:41:13] 2024-05-16 01:40:55,120 | INFO     | all data control threads have been joined
[2024-05-15 21:41:13] 2024-05-16 01:40:55,166 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 21:41:13] 2024-05-16 01:40:55,166 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 21:41:13] 2024-05-16 01:40:55,166 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 21:41:13] 2024-05-16 01:40:55,494 | INFO     | [job] retrieve thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:55,494 | INFO     | [job] job monitor thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:55,836 | INFO     | all job control threads have been joined
[2024-05-15 21:41:13] 2024-05-16 01:40:55,908 | INFO     | [payload] failed_post thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:55,933 | INFO     | all payload control threads have been joined
[2024-05-15 21:41:13] 2024-05-16 01:40:56,126 | INFO     | [data] control thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:56,363 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:56,395 | INFO     | [data] copytool_in thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:56,508 | INFO     | [payload] validate_post thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:56,536 | INFO     | [job] validate thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:56,727 | INFO     | [data] copytool_out thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:56,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 21:41:13] 2024-05-16 01:40:56,842 | INFO     | [job] control thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:56,856 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:56,938 | INFO     | [payload] control thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:56,992 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:40:57,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 21:41:13] 2024-05-16 01:40:57,736 | INFO     | [job] queue monitor thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:41:01,669 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:41:05,468 | INFO     | job.realtimelogging is not enabled
[2024-05-15 21:41:13] 2024-05-16 01:41:06,473 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 21:41:13] 2024-05-16 01:41:08,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139724978632512)>', '<ExcThread(monitor, started 139724698130176)>']
[2024-05-15 21:41:13] 2024-05-16 01:41:09,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 21:41:13] 2024-05-16 01:41:09,230 | INFO     | [monitor] control thread has ended
[2024-05-15 21:41:13] 2024-05-16 01:41:13,388 | INFO     | all workflow threads have been joined
[2024-05-15 21:41:13] 2024-05-16 01:41:13,388 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 21:41:13] 2024-05-16 01:41:13,389 | INFO     | traces error code: 0
[2024-05-15 21:41:13] 2024-05-16 01:41:13,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 21:41:13] 2024-05-16 01:41:13,473 [wrapper] ==== pilot stdout END ====
[2024-05-15 21:41:13] 2024-05-16 01:41:13,476 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 21:41:13] 2024-05-16 01:41:13,478 [wrapper] pilotpid: 1120503
[2024-05-15 21:41:13] 2024-05-16 01:41:13,480 [wrapper] Pilot exit status: 0
[2024-05-15 21:41:13] 2024-05-16 01:41:13,489 [wrapper] pandaids: 6206925895
[2024-05-15 21:41:13] 2024-05-16 01:41:13,533 [wrapper] cleanup: SIGTERM to supervisor_pilot 1456813 1120504
[2024-05-15 21:41:13] 2024-05-16 01:41:13,538 [wrapper] Test setup, not cleaning
[2024-05-15 21:41:13] 2024-05-16 01:41:13,540 [wrapper] ==== wrapper stdout END ====
[2024-05-15 21:41:13] 2024-05-16 01:41:13,544 [wrapper] ==== wrapper stderr END ====
[2024-05-15 21:41:13] 2024-05-16 01:41:13,549 [wrapper] apfmon messages muted
[2024-05-15 21:41:13]  *** Error codes and diagnostics ***
[2024-05-15 21:41:13]     "exeErrorCode": 0,
[2024-05-15 21:41:13]     "exeErrorDiag": "",
[2024-05-15 21:41:13]     "pilotErrorCode": 0,
[2024-05-15 21:41:13]     "pilotErrorDiag": "",
[2024-05-15 21:41:13]  *** Listing of results directory ***
[2024-05-15 21:41:14] total 820136
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas    467845 May 15 16:11 pilot3.tar.gz
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas      5633 May 15 16:21 queuedata.json
[2024-05-15 21:41:14] -rwx------ 1 boincer umatlas     32251 May 15 16:21 runpilot2-wrapper.sh
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas       100 May 15 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 21:41:14] -rwxr-xr-x 1 boincer umatlas      7986 May 15 20:02 run_atlas
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas       105 May 15 20:02 job.xml
[2024-05-15 21:41:14] -rw-r--r-- 2 boincer umatlas 601724998 May 15 20:03 EVNT.38776100._000335.pool.root.1
[2024-05-15 21:41:14] -rw-r--r-- 2 boincer umatlas     17537 May 15 20:03 start_atlas.sh
[2024-05-15 21:41:14] drwxrwx--x 2 boincer umatlas      4096 May 15 20:03 shared
[2024-05-15 21:41:14] -rw-r--r-- 2 boincer umatlas    480002 May 15 20:03 input.tar.gz
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas         0 May 15 20:03 boinc_lockfile
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas      2641 May 15 20:03 pandaJob.out
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas       461 May 15 20:03 setup.sh.local
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas   1011347 May 15 20:03 agis_schedconf.cvmfs.json
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas         0 May 15 20:03 agis_ddmendpoints.agis.ALL.json
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas   1324701 May 15 20:03 cric_ddmendpoints.json
[2024-05-15 21:41:14] drwx------ 4 boincer umatlas      4096 May 15 20:03 pilot3
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas      9220 May 15 21:37 init_data.xml
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas 232739138 May 15 21:40 HITS.38776104._008367.pool.root.1
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas       530 May 15 21:40 boinc_task_state.xml
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas      1047 May 15 21:40 memory_monitor_summary.json
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas    318416 May 15 21:40 log.38776104._008367.job.log.tgz.1
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas      8192 May 15 21:40 boinc_mmap_file
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas        27 May 15 21:40 wrapper_checkpoint.txt
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas        95 May 15 21:40 pilot_heartbeat.json
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas      7743 May 15 21:40 heartbeat.json
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas      4285 May 15 21:41 pilotlog.txt
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas    596986 May 15 21:41 log.38776104._008367.job.log.1
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas       357 May 15 21:41 output.list
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas       620 May 15 21:41 runtime_log
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas    931840 May 15 21:41 result.tar.gz
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas     11381 May 15 21:41 runtime_log.err
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas       643 May 15 21:41 LtGLDmFJaR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmDkOKDm51btLm.diag
[2024-05-15 21:41:14] -rw-r--r-- 1 boincer umatlas     21331 May 15 21:41 stderr.txt
[2024-05-15 21:41:14] HITS file was successfully produced:
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas 232739138 May 15 21:40 shared/HITS.pool.root.1
[2024-05-15 21:41:14]  *** Contents of shared directory: ***
[2024-05-15 21:41:14] total 816324
[2024-05-15 21:41:14] -rw-r--r-- 2 boincer umatlas 601724998 May 15 20:03 ATLAS.root_0
[2024-05-15 21:41:14] -rw-r--r-- 2 boincer umatlas     17537 May 15 20:03 start_atlas.sh
[2024-05-15 21:41:14] -rw-r--r-- 2 boincer umatlas    480002 May 15 20:03 input.tar.gz
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas 232739138 May 15 21:40 HITS.pool.root.1
[2024-05-15 21:41:14] -rw------- 1 boincer umatlas    931840 May 15 21:41 result.tar.gz
21:41:15 (1116249): run_atlas exited; CPU time 36958.754695
21:41:15 (1116249): called boinc_finish(0)

</stderr_txt>
]]>

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