Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:10:32 (27900): wrapper (7.7.26015): starting
13:10:32 (27900): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 13:10:32] Arguments: --nthreads 4
[2024-05-18 13:10:32] Threads: 4
[2024-05-18 13:10:32] Checking for CVMFS
[2024-05-18 13:10:32] No cvmfs_config command found, will try listing directly
[2024-05-18 13:10:32] CVMFS is ok
[2024-05-18 13:10:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 13:10:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 13:10:32] Further information can be found at the LHC@home message board.
[2024-05-18 13:10:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 13:10:32] Checking for apptainer binary...
[2024-05-18 13:10:32] which: no apptainer in ((null))
[2024-05-18 13:10:32] apptainer is not installed, using version from CVMFS
[2024-05-18 13:10:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 13:10:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-05-18 13:10:32] apptainer works
[2024-05-18 13:10:32] Set ATHENA_PROC_NUMBER=4
[2024-05-18 13:10:32] Set ATHENA_CORE_NUMBER=4
[2024-05-18 13:10:32] Starting ATLAS job with PandaID=6206904636
[2024-05-18 13:10:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 14:51:24]  *** The last 200 lines of the pilot log: ***
[2024-05-18 14:51:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 14:51:24]  is_tar=False
[2024-05-18 14:51:24]  lfn=log.38776104._007937.job.log.tgz.1
[2024-05-18 14:51:24]  mtime=0
[2024-05-18 14:51:24]  protocol_id=None
[2024-05-18 14:51:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 14:51:24]  replicas=None
[2024-05-18 14:51:24]  scope=mc23_13p6TeV
[2024-05-18 14:51:24]  status=None
[2024-05-18 14:51:24]  status_code=0
[2024-05-18 14:51:24]  storage_token=
[2024-05-18 14:51:24]  surl=/scratch/boinc/var/slot124/slots/1/PanDA_Pilot-6206904636/log.38776104._007937.job.log.tgz.1
[2024-05-18 14:51:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/3d/log.38776104._007937.job.log.tgz.1
[2024-05-18 14:51:24]  workdir=None
[2024-05-18 14:51:24] ]
[2024-05-18 14:51:24] 2024-05-18 12:50:53,711 | INFO     | transferring file log.38776104._007937.job.log.tgz.1 from /scratch/boinc/var/slot124/slots/1/PanDA_Pilot-6206904636/log.38776104._007937.job.log.tgz.1 to /scratch/
[2024-05-18 14:51:24] 2024-05-18 12:50:53,712 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot124/slots/1/PanDA_Pilot-6206904636/log.38776104._007937.job.log.tgz.1 /scratch/boinc/var/slot124/slots/1/
[2024-05-18 14:51:24] 2024-05-18 12:50:53,730 | INFO     | adding to output.list: log.38776104._007937.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/3d/log.38776104._007937.job.log.tg
[2024-05-18 14:51:24] 2024-05-18 12:50:53,730 | INFO     | summary of transferred files:
[2024-05-18 14:51:24] 2024-05-18 12:50:53,730 | INFO     |  -- lfn=log.38776104._007937.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 14:51:24] 2024-05-18 12:50:53,730 | INFO     | stage-out finished correctly
[2024-05-18 14:51:24] 2024-05-18 12:50:55,637 | WARNING  | process 40546 is no longer using CPU - aborting
[2024-05-18 14:51:24] 2024-05-18 12:50:55,638 | INFO     | will not send any job update
[2024-05-18 14:51:24] 2024-05-18 12:50:56,496 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 14:51:24] 2024-05-18 12:50:57,324 | INFO     | job 6206904636 has state=finished
[2024-05-18 14:51:24] 2024-05-18 12:50:57,324 | INFO     | preparing for final server update for job 6206904636 in state='finished'
[2024-05-18 14:51:24] 2024-05-18 12:50:57,325 | INFO     | this job has now completed (state=finished)
[2024-05-18 14:51:24] 2024-05-18 12:50:57,325 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 14:51:24] 2024-05-18 12:50:57,325 | INFO     | job 6206904636 has finished - writing final server update
[2024-05-18 14:51:24] 2024-05-18 12:50:57,325 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1749279/.job.ad'
[2024-05-18 14:51:24] 2024-05-18 12:50:57,325 | INFO     | total number of processed events: 400 (read)
[2024-05-18 14:51:24] 2024-05-18 12:50:57,336 | INFO     | executing command: lscpu
[2024-05-18 14:51:24] 2024-05-18 12:50:57,372 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-05-18 14:51:24] 2024-05-18 12:50:57,373 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 14:51:24] 2024-05-18 12:50:57,406 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 14:51:24] 2024-05-18 12:50:58,141 | INFO     | monitor loop #464: job 0:6206904636 is in state 'finished'
[2024-05-18 14:51:24] 2024-05-18 12:50:58,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 14:51:24] 2024-05-18 12:50:59,488 | INFO     | 6018s have passed since pilot start
[2024-05-18 14:51:24] 2024-05-18 12:51:00,645 | INFO     | monitor loop #465: job 0:6206904636 is in state 'finished'
[2024-05-18 14:51:24] 2024-05-18 12:51:00,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 14:51:24] 2024-05-18 12:51:01,975 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-18 14:51:24] 2024-05-18 12:51:01,976 | INFO     | using path: /scratch/boinc/var/slot124/slots/1/PanDA_Pilot-6206904636/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 14:51:24] 2024-05-18 12:51:01,977 | INFO     | extracted standard info from prmon json
[2024-05-18 14:51:24] 2024-05-18 12:51:01,977 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 14:51:24] 2024-05-18 12:51:01,977 | WARNING  | GPU info not found in prmon json
[2024-05-18 14:51:24] 2024-05-18 12:51:01,977 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 14:51:24] 2024-05-18 12:51:01,977 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 14:51:24] 2024-05-18 12:51:01,979 | INFO     | fitting pss+swap vs Time
[2024-05-18 14:51:24] 2024-05-18 12:51:01,979 | INFO     | model: linear, x: [1716030973.0, 1716031034.0, 1716031095.0, 1716031156.0, 1716031217.0, 1716031278.0, 1716031339.0, 1716031400.0, 1716031461.0, 1716031522.0, 1716
[2024-05-18 14:51:24] 2024-05-18 12:51:01,980 | INFO     | sum of square deviations: 241429643.0
[2024-05-18 14:51:24] 2024-05-18 12:51:01,980 | INFO     | sum of deviations: 17658607844.5
[2024-05-18 14:51:24] 2024-05-18 12:51:01,980 | INFO     | mean x: 1716033748.5
[2024-05-18 14:51:24] 2024-05-18 12:51:01,980 | INFO     | mean y: 2318397.0760869565
[2024-05-18 14:51:24] 2024-05-18 12:51:01,980 | INFO     | -- intersect: -125511544093.65726
[2024-05-18 14:51:24] 2024-05-18 12:51:01,980 | INFO     | intersect: -125511544093.65726
[2024-05-18 14:51:24] 2024-05-18 12:51:01,980 | INFO     | chi2: 1.7944545099113045
[2024-05-18 14:51:24] 2024-05-18 12:51:01,980 | INFO     | -- intersect: -125511544093.65726
[2024-05-18 14:51:24] 2024-05-18 12:51:01,981 | INFO     | current memory leak: 73.14 B/s (using 92 data points, chi2=1.79)
[2024-05-18 14:51:24] 2024-05-18 12:51:01,981 | INFO     | ..............................
[2024-05-18 14:51:24] 2024-05-18 12:51:01,981 | INFO     | . Timing measurements:
[2024-05-18 14:51:24] 2024-05-18 12:51:01,981 | INFO     | . get job = 0 s
[2024-05-18 14:51:24] 2024-05-18 12:51:01,981 | INFO     | . initial setup = 1 s
[2024-05-18 14:51:24] 2024-05-18 12:51:01,981 | INFO     | . payload setup = 5 s
[2024-05-18 14:51:24] 2024-05-18 12:51:01,981 | INFO     | . stage-in = 0 s
[2024-05-18 14:51:24] 2024-05-18 12:51:01,981 | INFO     | . payload execution = 5985 s
[2024-05-18 14:51:24] 2024-05-18 12:51:01,981 | INFO     | . stage-out = 0 s
[2024-05-18 14:51:24] 2024-05-18 12:51:01,981 | INFO     | . log creation = 0 s
[2024-05-18 14:51:24] 2024-05-18 12:51:01,981 | INFO     | ..............................
[2024-05-18 14:51:24] 2024-05-18 12:51:02,046 | INFO     | 
[2024-05-18 14:51:24] 2024-05-18 12:51:02,046 | INFO     | job summary report
[2024-05-18 14:51:24] 2024-05-18 12:51:02,046 | INFO     | --------------------------------------------------
[2024-05-18 14:51:24] 2024-05-18 12:51:02,047 | INFO     | PanDA job id: 6206904636
[2024-05-18 14:51:24] 2024-05-18 12:51:02,047 | INFO     | task id: 38776104
[2024-05-18 14:51:24] 2024-05-18 12:51:02,047 | INFO     | errors: (none)
[2024-05-18 14:51:24] 2024-05-18 12:51:02,047 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 14:51:24] 2024-05-18 12:51:02,047 | INFO     | pilot state: finished 
[2024-05-18 14:51:24] 2024-05-18 12:51:02,047 | INFO     | transexitcode: 0
[2024-05-18 14:51:24] 2024-05-18 12:51:02,047 | INFO     | exeerrorcode: 0
[2024-05-18 14:51:24] 2024-05-18 12:51:02,047 | INFO     | exeerrordiag: 
[2024-05-18 14:51:24] 2024-05-18 12:51:02,047 | INFO     | exitcode: 0
[2024-05-18 14:51:24] 2024-05-18 12:51:02,047 | INFO     | exitmsg: OK
[2024-05-18 14:51:24] 2024-05-18 12:51:02,047 | INFO     | cpuconsumptiontime: 21281 s
[2024-05-18 14:51:24] 2024-05-18 12:51:02,048 | INFO     | nevents: 400
[2024-05-18 14:51:24] 2024-05-18 12:51:02,048 | INFO     | neventsw: 0
[2024-05-18 14:51:24] 2024-05-18 12:51:02,048 | INFO     | pid: 40546
[2024-05-18 14:51:24] 2024-05-18 12:51:02,048 | INFO     | pgrp: 40546
[2024-05-18 14:51:24] 2024-05-18 12:51:02,048 | INFO     | corecount: 4
[2024-05-18 14:51:24] 2024-05-18 12:51:02,048 | INFO     | event service: False
[2024-05-18 14:51:24] 2024-05-18 12:51:02,048 | INFO     | sizes: {0: 2390693, 1: 2392241, 5: 2392447, 11: 2392503, 5995: 2419243, 5997: 2428227, 6000: 2428411, 6005: 2428581}
[2024-05-18 14:51:24] 2024-05-18 12:51:02,048 | INFO     | --------------------------------------------------
[2024-05-18 14:51:24] 2024-05-18 12:51:02,048 | INFO     | 
[2024-05-18 14:51:24] 2024-05-18 12:51:02,048 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/1
[2024-05-18 14:51:24] 2024-05-18 12:51:02,067 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,067 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,067 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,067 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,068 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 14:51:24] 2024-05-18 12:51:02,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,068 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 14:51:24] 2024-05-18 12:51:02,069 | INFO     | job 6206904636 has completed (purged errors)
[2024-05-18 14:51:24] 2024-05-18 12:51:02,069 | INFO     | overall cleanup function is called
[2024-05-18 14:51:24] 2024-05-18 12:51:03,077 | INFO     | --- collectZombieJob: --- 10, [40546]
[2024-05-18 14:51:24] 2024-05-18 12:51:03,077 | INFO     | zombie collector waiting for pid 40546
[2024-05-18 14:51:24] 2024-05-18 12:51:03,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 14:51:24] 2024-05-18 12:51:04,079 | INFO     | collected zombie processes
[2024-05-18 14:51:24] 2024-05-18 12:51:04,079 | INFO     | will now attempt to kill all subprocesses of pid=40546
[2024-05-18 14:51:24] 2024-05-18 12:51:04,255 | INFO     | process IDs to be killed: [40546] (in reverse order)
[2024-05-18 14:51:24] 2024-05-18 12:51:04,428 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 14:51:24] 2024-05-18 12:51:04,428 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 14:51:24] 2024-05-18 12:51:04,440 | INFO     | did not find any defunct processes belonging to 40546
[2024-05-18 14:51:24] 2024-05-18 12:51:04,447 | INFO     | did not find any defunct processes belonging to 40546
[2024-05-18 14:51:24] 2024-05-18 12:51:04,447 | INFO     | ready for new job
[2024-05-18 14:51:24] 2024-05-18 12:51:04,447 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 14:51:24] 2024-05-18 12:51:04,449 | INFO     | *************************************
[2024-05-18 14:51:24] 2024-05-18 12:51:04,449 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 14:51:24] 2024-05-18 12:51:04,449 | INFO     | *************************************
[2024-05-18 14:51:24] 2024-05-18 12:51:04,449 | INFO     | 
[2024-05-18 14:51:24] 2024-05-18 12:51:04,453 | INFO     | architecture information:
[2024-05-18 14:51:24] 2024-05-18 12:51:04,453 | INFO     | executing command: cat /etc/os-release
[2024-05-18 14:51:24] 2024-05-18 12:51:04,470 | INFO     | cat /etc/os-release:
[2024-05-18 14:51:24] NAME="CentOS Linux"
[2024-05-18 14:51:24] VERSION="7 (Core)"
[2024-05-18 14:51:24] ID="centos"
[2024-05-18 14:51:24] ID_LIKE="rhel fedora"
[2024-05-18 14:51:24] VERSION_ID="7"
[2024-05-18 14:51:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 14:51:24] ANSI_COLOR="0;31"
[2024-05-18 14:51:24] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 14:51:24] HOME_URL="https://www.centos.org/"
[2024-05-18 14:51:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 14:51:24] 
[2024-05-18 14:51:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 14:51:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 14:51:24] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 14:51:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 14:51:24] 
[2024-05-18 14:51:24] 2024-05-18 12:51:04,470 | INFO     | *************************************
[2024-05-18 14:51:24] 2024-05-18 12:51:04,971 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/1
[2024-05-18 14:51:24] 2024-05-18 12:51:04,987 | INFO     | sufficient remaining disk space (2953108783104 B)
[2024-05-18 14:51:24] 2024-05-18 12:51:04,987 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 14:51:24] 2024-05-18 12:51:04,987 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 14:51:24] 2024-05-18 12:51:04,988 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 14:51:24] 2024-05-18 12:51:04,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 14:51:24] 2024-05-18 12:51:04,989 | INFO     | aborting loop
[2024-05-18 14:51:24] 2024-05-18 12:51:04,989 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 14:51:24] 2024-05-18 12:51:04,989 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 14:51:24] 2024-05-18 12:51:04,989 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 14:51:24] 2024-05-18 12:51:04,989 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 14:51:24] 2024-05-18 12:51:05,192 | INFO     | all data control threads have been joined
[2024-05-18 14:51:24] 2024-05-18 12:51:05,297 | INFO     | all payload control threads have been joined
[2024-05-18 14:51:24] 2024-05-18 12:51:05,687 | INFO     | all job control threads have been joined
[2024-05-18 14:51:24] 2024-05-18 12:51:05,993 | INFO     | [job] retrieve thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:05,994 | INFO     | [job] job monitor thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:06,197 | INFO     | [data] control thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:06,266 | INFO     | [payload] validate_post thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:06,303 | INFO     | [payload] control thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:06,530 | INFO     | [data] copytool_in thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:06,663 | INFO     | [job] validate thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:06,693 | INFO     | [job] control thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:06,732 | INFO     | [payload] failed_post thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:06,881 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:06,922 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:06,993 | INFO     | [data] copytool_out thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:06,999 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:07,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 14:51:24] 2024-05-18 12:51:07,111 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 14:51:24] 2024-05-18 12:51:08,063 | INFO     | [job] queue monitor thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:11,117 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:15,861 | INFO     | job.realtimelogging is not enabled
[2024-05-18 14:51:24] 2024-05-18 12:51:16,866 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 14:51:24] 2024-05-18 12:51:18,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47917531038784)>', '<ExcThread(monitor, started 47917702289152)>']
[2024-05-18 14:51:24] 2024-05-18 12:51:19,061 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 14:51:24] 2024-05-18 12:51:19,061 | INFO     | [monitor] control thread has ended
[2024-05-18 14:51:24] 2024-05-18 12:51:23,356 | INFO     | all workflow threads have been joined
[2024-05-18 14:51:24] 2024-05-18 12:51:23,356 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 14:51:24] 2024-05-18 12:51:23,356 | INFO     | traces error code: 0
[2024-05-18 14:51:24] 2024-05-18 12:51:23,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 14:51:24] 2024-05-18 12:51:23,436 [wrapper] ==== pilot stdout END ====
[2024-05-18 14:51:24] 2024-05-18 12:51:23,438 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 14:51:24] 2024-05-18 12:51:23,439 [wrapper] pilotpid: 32911
[2024-05-18 14:51:24] 2024-05-18 12:51:23,441 [wrapper] Pilot exit status: 0
[2024-05-18 14:51:24] 2024-05-18 12:51:23,447 [wrapper] pandaids: 6206904636
[2024-05-18 14:51:24] 2024-05-18 12:51:23,581 [wrapper] cleanup: SIGTERM to supervisor_pilot  248987 32912
[2024-05-18 14:51:24] 2024-05-18 12:51:23,583 [wrapper] Test setup, not cleaning
[2024-05-18 14:51:24] 2024-05-18 12:51:23,585 [wrapper] ==== wrapper stdout END ====
[2024-05-18 14:51:24] 2024-05-18 12:51:23,587 [wrapper] ==== wrapper stderr END ====
[2024-05-18 14:51:24] 2024-05-18 12:51:23,592 [wrapper] apfmon messages muted
[2024-05-18 14:51:24]  *** Error codes and diagnostics ***
[2024-05-18 14:51:24]     "exeErrorCode": 0,
[2024-05-18 14:51:24]     "exeErrorDiag": "",
[2024-05-18 14:51:24]     "pilotErrorCode": 0,
[2024-05-18 14:51:24]     "pilotErrorDiag": "",
[2024-05-18 14:51:24]  *** Listing of results directory ***
[2024-05-18 14:51:24] total 814860
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc    467845 May 15 20:25 pilot3.tar.gz
[2024-05-18 14:51:24] -rwx------ 1 boinc boinc     32251 May 15 20:58 runpilot2-wrapper.sh
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc      5633 May 15 20:58 queuedata.json
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc       100 May 18 13:10 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 14:51:24] -rwxr-xr-x 1 boinc boinc      7986 May 18 13:10 run_atlas
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc       105 May 18 13:10 job.xml
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc      6646 May 18 13:10 init_data.xml
[2024-05-18 14:51:24] -rw-r--r-- 2 boinc boinc 602195426 May 18 13:10 EVNT.38776100._000318.pool.root.1
[2024-05-18 14:51:24] -rw-r--r-- 2 boinc boinc     17537 May 18 13:10 start_atlas.sh
[2024-05-18 14:51:24] drwxrwx--x 2 boinc boinc      4096 May 18 13:10 shared
[2024-05-18 14:51:24] -rw-r--r-- 2 boinc boinc    480003 May 18 13:10 input.tar.gz
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc         0 May 18 13:10 boinc_lockfile
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc      2640 May 18 13:10 pandaJob.out
[2024-05-18 14:51:24] -rw------- 1 boinc boinc       424 May 18 13:10 setup.sh.local
[2024-05-18 14:51:24] -rw------- 1 boinc boinc   1019073 May 18 13:10 agis_schedconf.cvmfs.json
[2024-05-18 14:51:24] -rw------- 1 boinc boinc         0 May 18 13:10 agis_ddmendpoints.agis.ALL.json
[2024-05-18 14:51:24] -rw------- 1 boinc boinc   1324701 May 18 13:10 cric_ddmendpoints.json
[2024-05-18 14:51:24] drwx------ 4 boinc boinc      4096 May 18 13:10 pilot3
[2024-05-18 14:51:24] -rw------- 1 boinc boinc 226964727 May 18 14:50 HITS.38776104._007937.pool.root.1
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc       531 May 18 14:50 boinc_task_state.xml
[2024-05-18 14:51:24] -rw------- 1 boinc boinc      1040 May 18 14:50 memory_monitor_summary.json
[2024-05-18 14:51:24] -rw------- 1 boinc boinc    252989 May 18 14:50 log.38776104._007937.job.log.tgz.1
[2024-05-18 14:51:24] -rw------- 1 boinc boinc        95 May 18 14:50 pilot_heartbeat.json
[2024-05-18 14:51:24] -rw------- 1 boinc boinc      7721 May 18 14:51 heartbeat.json
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc        27 May 18 14:51 wrapper_checkpoint.txt
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc      8192 May 18 14:51 boinc_mmap_file
[2024-05-18 14:51:24] -rw------- 1 boinc boinc      4418 May 18 14:51 pilotlog.txt
[2024-05-18 14:51:24] -rw------- 1 boinc boinc    606579 May 18 14:51 log.38776104._007937.job.log.1
[2024-05-18 14:51:24] -rw------- 1 boinc boinc       357 May 18 14:51 output.list
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc       620 May 18 14:51 runtime_log
[2024-05-18 14:51:24] -rw------- 1 boinc boinc    880640 May 18 14:51 result.tar.gz
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc     11428 May 18 14:51 runtime_log.err
[2024-05-18 14:51:24] -rw------- 1 boinc boinc       655 May 18 14:51 fncLDmA1YR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmngOKDmbqNtDm.diag
[2024-05-18 14:51:24] -rw-r--r-- 1 boinc boinc     21321 May 18 14:51 stderr.txt
[2024-05-18 14:51:24] HITS file was successfully produced:
[2024-05-18 14:51:24] -rw------- 1 boinc boinc 226964727 May 18 14:50 shared/HITS.pool.root.1
[2024-05-18 14:51:24]  *** Contents of shared directory: ***
[2024-05-18 14:51:24] total 811092
[2024-05-18 14:51:24] -rw-r--r-- 2 boinc boinc 602195426 May 18 13:10 ATLAS.root_0
[2024-05-18 14:51:24] -rw-r--r-- 2 boinc boinc     17537 May 18 13:10 start_atlas.sh
[2024-05-18 14:51:24] -rw-r--r-- 2 boinc boinc    480003 May 18 13:10 input.tar.gz
[2024-05-18 14:51:24] -rw------- 1 boinc boinc 226964727 May 18 14:50 HITS.pool.root.1
[2024-05-18 14:51:24] -rw------- 1 boinc boinc    880640 May 18 14:51 result.tar.gz
14:51:25 (27900): run_atlas exited; CPU time 21151.125004
14:51:25 (27900): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN