Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:48:13 (79028): wrapper (7.7.26015): starting
18:48:13 (79028): wrapper: running run_atlas (--nthreads 8)
[2024-05-15 18:48:13] Arguments: --nthreads 8
[2024-05-15 18:48:13] Threads: 8
[2024-05-15 18:48:13] Checking for CVMFS
[2024-05-15 18:48:13] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 18:48:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 18:48:14] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 18:48:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 18:48:14] 2.11.2.0 56863 228 74924 132777 0 101 12524982 18432001 17971 130560 0 1686312 97.932 6662208 36485 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-05-15 18:48:14] CVMFS is ok
[2024-05-15 18:48:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 18:48:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 18:48:14] Further information can be found at the LHC@home message board.
[2024-05-15 18:48:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 18:48:14] Checking for apptainer binary...
[2024-05-15 18:48:14] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 18:48:14] Running /usr/bin/apptainer --version
[2024-05-15 18:48:14] apptainer version 1.3.0-1.el7
[2024-05-15 18:48:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 18:48:15] c-212-2.aglt2.org
[2024-05-15 18:48:15] apptainer works
[2024-05-15 18:48:15] Set ATHENA_PROC_NUMBER=8
[2024-05-15 18:48:15] Set ATHENA_CORE_NUMBER=8
[2024-05-15 18:48:15] Starting ATLAS job with PandaID=6206904166
[2024-05-15 18:48:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 21:45:09]  *** The last 200 lines of the pilot log: ***
[2024-05-15 21:45:09] 2024-05-16 01:44:32,082 | INFO     | monitor loop #785: job 0:6206904166 is in state 'finished'
[2024-05-15 21:45:09] 2024-05-16 01:44:32,082 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 21:45:09] 2024-05-16 01:44:34,589 | INFO     | monitor loop #786: job 0:6206904166 is in state 'finished'
[2024-05-15 21:45:09] 2024-05-16 01:44:34,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 21:45:09] 2024-05-16 01:44:37,098 | INFO     | monitor loop #787: job 0:6206904166 is in state 'finished'
[2024-05-15 21:45:09] 2024-05-16 01:44:37,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 21:45:09] 2024-05-16 01:44:39,602 | INFO     | monitor loop #788: job 0:6206904166 is in state 'finished'
[2024-05-15 21:45:09] 2024-05-16 01:44:39,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 21:45:09] 2024-05-16 01:44:42,112 | INFO     | monitor loop #789: job 0:6206904166 is in state 'finished'
[2024-05-15 21:45:09] 2024-05-16 01:44:42,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 21:45:09] 2024-05-16 01:44:44,616 | INFO     | monitor loop #790: job 0:6206904166 is in state 'finished'
[2024-05-15 21:45:09] 2024-05-16 01:44:44,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 21:45:09] 2024-05-16 01:44:47,133 | INFO     | monitor loop #791: job 0:6206904166 is in state 'finished'
[2024-05-15 21:45:09] 2024-05-16 01:44:47,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 21:45:09] 2024-05-16 01:44:48,556 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-15 21:45:09] 2024-05-16 01:44:48,556 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6206904166/memory_monitor_summary.json (trf name=prmon)
[2024-05-15 21:45:09] 2024-05-16 01:44:48,584 | INFO     | extracted standard info from prmon json
[2024-05-15 21:45:09] 2024-05-16 01:44:48,584 | INFO     | extracted standard memory fields from prmon json
[2024-05-15 21:45:09] 2024-05-16 01:44:48,584 | WARNING  | GPU info not found in prmon json
[2024-05-15 21:45:09] 2024-05-16 01:44:48,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-15 21:45:09] 2024-05-16 01:44:48,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-15 21:45:09] 2024-05-16 01:44:48,591 | INFO     | fitting pss+swap vs Time
[2024-05-15 21:45:09] 2024-05-16 01:44:48,592 | INFO     | model: linear, x: [1715813355.0, 1715813416.0, 1715813477.0, 1715813538.0, 1715813599.0, 1715813660.0, 1715813721.0, 1715813782.0, 1715813843.0, 1715813904.0, 1715
[2024-05-15 21:45:09] 2024-05-16 01:44:48,592 | INFO     | sum of square deviations: 1577798186.9476755
[2024-05-15 21:45:09] 2024-05-16 01:44:48,608 | INFO     | sum of deviations: 255488156852.7209
[2024-05-15 21:45:09] 2024-05-16 01:44:48,609 | INFO     | mean x: 1715818570.5174417
[2024-05-15 21:45:09] 2024-05-16 01:44:48,609 | INFO     | mean y: 2151495.093023256
[2024-05-15 21:45:09] 2024-05-16 01:44:48,609 | INFO     | -- intersect: -277835234617.7795
[2024-05-15 21:45:09] 2024-05-16 01:44:48,609 | INFO     | intersect: -277835234617.7795
[2024-05-15 21:45:09] 2024-05-16 01:44:48,609 | INFO     | chi2: 12.868174558749878
[2024-05-15 21:45:09] 2024-05-16 01:44:48,609 | INFO     | model: linear, x: [1715813355.0, 1715813416.0, 1715813477.0, 1715813538.0, 1715813599.0, 1715813660.0, 1715813721.0, 1715813782.0, 1715813843.0, 1715813904.0, 1715
[2024-05-15 21:45:09] 2024-05-16 01:44:48,609 | INFO     | sum of square deviations: 1444159386.9461083
[2024-05-15 21:45:09] 2024-05-16 01:44:48,610 | INFO     | sum of deviations: 257132802445.85022
[2024-05-15 21:45:09] 2024-05-16 01:44:48,610 | INFO     | mean x: 1715818418.0179641
[2024-05-15 21:45:09] 2024-05-16 01:44:48,610 | INFO     | mean y: 2153057.383233533
[2024-05-15 21:45:09] 2024-05-16 01:44:48,610 | INFO     | -- intersect: -305499581931.9476
[2024-05-15 21:45:09] 2024-05-16 01:44:48,610 | INFO     | intersect: -305499581931.9476
[2024-05-15 21:45:09] 2024-05-16 01:44:48,610 | INFO     | chi2: 11.610239002719618
[2024-05-15 21:45:09] 2024-05-16 01:44:48,610 | INFO     | current chi2=11.610239002719618 (change=9.775555579286968 %)
[2024-05-15 21:45:09] 2024-05-16 01:44:48,610 | INFO     | right removable region: 166
[2024-05-15 21:45:09] 2024-05-16 01:44:48,611 | INFO     | model: linear, x: [1715813660.0, 1715813721.0, 1715813782.0, 1715813843.0, 1715813904.0, 1715813965.0, 1715814026.0, 1715814087.0, 1715814148.0, 1715814209.0, 1715
[2024-05-15 21:45:09] 2024-05-16 01:44:48,611 | INFO     | sum of square deviations: 1444157556.9461083
[2024-05-15 21:45:09] 2024-05-16 01:44:48,611 | INFO     | sum of deviations: 210945793612.1498
[2024-05-15 21:45:09] 2024-05-16 01:44:48,611 | INFO     | mean x: 1715818723.0179641
[2024-05-15 21:45:09] 2024-05-16 01:44:48,612 | INFO     | mean y: 2202187.616766467
[2024-05-15 21:45:09] 2024-05-16 01:44:48,612 | INFO     | -- intersect: -250624705161.05045
[2024-05-15 21:45:09] 2024-05-16 01:44:48,612 | INFO     | intersect: -250624705161.05045
[2024-05-15 21:45:09] 2024-05-16 01:44:48,612 | INFO     | chi2: 10.190766551466568
[2024-05-15 21:45:09] 2024-05-16 01:44:48,612 | INFO     | current chi2=10.190766551466568 (change=20.806432140468377 %)
[2024-05-15 21:45:09] 2024-05-16 01:44:48,620 | INFO     | left removable region: 10
[2024-05-15 21:45:09] 2024-05-16 01:44:48,620 | INFO     | model: linear, x: [1715813965.0, 1715814026.0, 1715814087.0, 1715814148.0, 1715814209.0, 1715814270.0, 1715814331.0, 1715814392.0, 1715814453.0, 1715814514.0, 1715
[2024-05-15 21:45:09] 2024-05-16 01:44:48,620 | INFO     | sum of square deviations: 1177164826.942304
[2024-05-15 21:45:09] 2024-05-16 01:44:48,621 | INFO     | sum of deviations: 178420524828.03848
[2024-05-15 21:45:09] 2024-05-16 01:44:48,621 | INFO     | mean x: 1715818692.5192308
[2024-05-15 21:45:09] 2024-05-16 01:44:48,621 | INFO     | mean y: 2247217.987179487
[2024-05-15 21:45:09] 2024-05-16 01:44:48,621 | INFO     | -- intersect: -260060969608.01523
[2024-05-15 21:45:09] 2024-05-16 01:44:48,621 | INFO     | intersect: -260060969608.01523
[2024-05-15 21:45:09] 2024-05-16 01:44:48,621 | INFO     | chi2: 7.935990562306872
[2024-05-15 21:45:09] 2024-05-16 01:44:48,622 | INFO     | -- intersect: -260060969608.01523
[2024-05-15 21:45:09] 2024-05-16 01:44:48,622 | INFO     | current memory leak: 151.57 B/s (using 156 data points, chi2=7.94)
[2024-05-15 21:45:09] 2024-05-16 01:44:48,622 | INFO     | ..............................
[2024-05-15 21:45:09] 2024-05-16 01:44:48,622 | INFO     | . Timing measurements:
[2024-05-15 21:45:09] 2024-05-16 01:44:48,622 | INFO     | . get job = 0 s
[2024-05-15 21:45:09] 2024-05-16 01:44:48,622 | INFO     | . initial setup = 1 s
[2024-05-15 21:45:09] 2024-05-16 01:44:48,622 | INFO     | . payload setup = 9 s
[2024-05-15 21:45:09] 2024-05-16 01:44:48,622 | INFO     | . stage-in = 0 s
[2024-05-15 21:45:09] 2024-05-16 01:44:48,622 | INFO     | . payload execution = 10482 s
[2024-05-15 21:45:09] 2024-05-16 01:44:48,622 | INFO     | . stage-out = 3 s
[2024-05-15 21:45:09] 2024-05-16 01:44:48,623 | INFO     | . log creation = 1 s
[2024-05-15 21:45:09] 2024-05-16 01:44:48,623 | INFO     | ..............................
[2024-05-15 21:45:09] 2024-05-16 01:44:49,195 | INFO     | 
[2024-05-15 21:45:09] 2024-05-16 01:44:49,195 | INFO     | job summary report
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | --------------------------------------------------
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | PanDA job id: 6206904166
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | task id: 38776104
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | errors: (none)
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | pilot state: finished 
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | transexitcode: 0
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | exeerrorcode: 0
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | exeerrordiag: 
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | exitcode: 0
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | exitmsg: OK
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | cpuconsumptiontime: 35423 s
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | nevents: 400
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | neventsw: 0
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | pid: 45268
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | pgrp: 45268
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | corecount: 8
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | event service: False
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | sizes: {0: 2392201, 9: 2392407, 11: 2392435, 10496: 2421046, 10500: 2430006, 10501: 2430062, 10554: 2430360}
[2024-05-15 21:45:09] 2024-05-16 01:44:49,196 | INFO     | --------------------------------------------------
[2024-05-15 21:45:09] 2024-05-16 01:44:49,197 | INFO     | 
[2024-05-15 21:45:09] 2024-05-16 01:44:49,197 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-05-15 21:45:09] 2024-05-16 01:44:49,231 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,231 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,231 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,232 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 21:45:09] 2024-05-16 01:44:49,233 | INFO     | job 6206904166 has completed (purged errors)
[2024-05-15 21:45:09] 2024-05-16 01:44:49,233 | INFO     | overall cleanup function is called
[2024-05-15 21:45:09] 2024-05-16 01:44:50,240 | INFO     | --- collectZombieJob: --- 10, [45268]
[2024-05-15 21:45:09] 2024-05-16 01:44:50,240 | INFO     | zombie collector waiting for pid 45268
[2024-05-15 21:45:09] 2024-05-16 01:44:50,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 21:45:09] 2024-05-16 01:44:51,245 | INFO     | collected zombie processes
[2024-05-15 21:45:09] 2024-05-16 01:44:51,245 | INFO     | will now attempt to kill all subprocesses of pid=45268
[2024-05-15 21:45:09] 2024-05-16 01:44:51,861 | INFO     | process IDs to be killed: [45268] (in reverse order)
[2024-05-15 21:45:09] 2024-05-16 01:44:52,072 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 21:45:09] 2024-05-16 01:44:52,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 21:45:09] 2024-05-16 01:44:52,082 | INFO     | did not find any defunct processes belonging to 45268
[2024-05-15 21:45:09] 2024-05-16 01:44:52,091 | INFO     | did not find any defunct processes belonging to 45268
[2024-05-15 21:45:09] 2024-05-16 01:44:52,091 | INFO     | ready for new job
[2024-05-15 21:45:09] 2024-05-16 01:44:52,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 21:45:09] 2024-05-16 01:44:52,093 | INFO     | *************************************
[2024-05-15 21:45:09] 2024-05-16 01:44:52,093 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 21:45:09] 2024-05-16 01:44:52,093 | INFO     | *************************************
[2024-05-15 21:45:09] 2024-05-16 01:44:52,093 | INFO     | 
[2024-05-15 21:45:09] 2024-05-16 01:44:52,097 | INFO     | architecture information:
[2024-05-15 21:45:09] 2024-05-16 01:44:52,098 | INFO     | executing command: cat /etc/os-release
[2024-05-15 21:45:09] 2024-05-16 01:44:52,218 | INFO     | cat /etc/os-release:
[2024-05-15 21:45:09] NAME="CentOS Linux"
[2024-05-15 21:45:09] VERSION="7 (Core)"
[2024-05-15 21:45:09] ID="centos"
[2024-05-15 21:45:09] ID_LIKE="rhel fedora"
[2024-05-15 21:45:09] VERSION_ID="7"
[2024-05-15 21:45:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 21:45:09] ANSI_COLOR="0;31"
[2024-05-15 21:45:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 21:45:09] HOME_URL="https://www.centos.org/"
[2024-05-15 21:45:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 21:45:09] 
[2024-05-15 21:45:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 21:45:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 21:45:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 21:45:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 21:45:09] 
[2024-05-15 21:45:09] 2024-05-16 01:44:52,218 | INFO     | *************************************
[2024-05-15 21:45:09] 2024-05-16 01:44:52,724 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-05-15 21:45:09] 2024-05-16 01:44:52,823 | INFO     | sufficient remaining disk space (98806267904 B)
[2024-05-15 21:45:09] 2024-05-16 01:44:52,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 21:45:09] 2024-05-16 01:44:52,823 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 21:45:09] 2024-05-16 01:44:52,938 | INFO     | all data control threads have been joined
[2024-05-15 21:45:09] 2024-05-16 01:44:53,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 21:45:09] 2024-05-16 01:44:53,163 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 21:45:09] 2024-05-16 01:44:53,163 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 21:45:09] 2024-05-16 01:44:53,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 21:45:09] 2024-05-16 01:44:53,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 21:45:09] 2024-05-16 01:44:53,198 | INFO     | aborting loop
[2024-05-15 21:45:09] 2024-05-16 01:44:53,236 | INFO     | all payload control threads have been joined
[2024-05-15 21:45:09] 2024-05-16 01:44:53,693 | INFO     | all job control threads have been joined
[2024-05-15 21:45:09] 2024-05-16 01:44:53,829 | INFO     | [job] retrieve thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:53,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 21:45:09] 2024-05-16 01:44:53,944 | INFO     | [data] control thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:54,032 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:54,051 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:54,204 | INFO     | [job] job monitor thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:54,242 | INFO     | [payload] control thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:54,511 | INFO     | [payload] validate_post thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:54,550 | INFO     | [payload] failed_post thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:54,639 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:54,699 | INFO     | [job] control thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:54,746 | INFO     | [data] copytool_in thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:54,893 | INFO     | [job] queue monitor thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:54,956 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:55,018 | INFO     | [job] validate thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:55,052 | INFO     | [data] copytool_out thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:44:55,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 21:45:09] 2024-05-16 01:44:59,715 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 21:45:09] 2024-05-16 01:45:01,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135783864128)>', '<ExcThread(monitor, started 140135354054400)>']
[2024-05-15 21:45:09] 2024-05-16 01:45:02,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 21:45:09] 2024-05-16 01:45:02,224 | INFO     | [monitor] control thread has ended
[2024-05-15 21:45:09] 2024-05-16 01:45:06,417 | INFO     | all workflow threads have been joined
[2024-05-15 21:45:09] 2024-05-16 01:45:06,417 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 21:45:09] 2024-05-16 01:45:06,418 | INFO     | traces error code: 0
[2024-05-15 21:45:09] 2024-05-16 01:45:06,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 21:45:09] 2024-05-16 01:45:06,698 [wrapper] ==== pilot stdout END ====
[2024-05-15 21:45:09] 2024-05-16 01:45:06,758 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 21:45:09] 2024-05-16 01:45:06,801 [wrapper] pilotpid: 15145
[2024-05-15 21:45:09] 2024-05-16 01:45:06,838 [wrapper] Pilot exit status: 0
[2024-05-15 21:45:09] 2024-05-16 01:45:07,132 [wrapper] pandaids: 6206904166
[2024-05-15 21:45:09] 2024-05-16 01:45:07,668 [wrapper] cleanup: SIGTERM to supervisor_pilot 13845 15146
[2024-05-15 21:45:09] 2024-05-16 01:45:07,745 [wrapper] Test setup, not cleaning
[2024-05-15 21:45:09] 2024-05-16 01:45:07,799 [wrapper] ==== wrapper stdout END ====
[2024-05-15 21:45:09] 2024-05-16 01:45:07,851 [wrapper] ==== wrapper stderr END ====
[2024-05-15 21:45:09] 2024-05-16 01:45:07,928 [wrapper] apfmon messages muted
[2024-05-15 21:45:09]  *** Error codes and diagnostics ***
[2024-05-15 21:45:09]     "exeErrorCode": 0,
[2024-05-15 21:45:09]     "exeErrorDiag": "",
[2024-05-15 21:45:09]     "pilotErrorCode": 0,
[2024-05-15 21:45:09]     "pilotErrorDiag": "",
[2024-05-15 21:45:09]  *** Listing of results directory ***
[2024-05-15 21:45:09] total 820564
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas    467845 May 15 14:25 pilot3.tar.gz
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas      5633 May 15 14:51 queuedata.json
[2024-05-15 21:45:09] -rwx------ 1 boincer umatlas     32251 May 15 14:53 runpilot2-wrapper.sh
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas       100 May 15 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 21:45:09] -rwxr-xr-x 1 boincer umatlas      7986 May 15 18:48 run_atlas
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas       105 May 15 18:48 job.xml
[2024-05-15 21:45:09] -rw-r--r-- 2 boincer umatlas 602743415 May 15 18:48 EVNT.38776100._000317.pool.root.1
[2024-05-15 21:45:09] -rw-r--r-- 2 boincer umatlas     17537 May 15 18:48 start_atlas.sh
[2024-05-15 21:45:09] drwxrwx--x 2 boincer umatlas      4096 May 15 18:48 shared
[2024-05-15 21:45:09] -rw-r--r-- 2 boincer umatlas    480004 May 15 18:48 input.tar.gz
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas         0 May 15 18:48 boinc_lockfile
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas      2640 May 15 18:48 pandaJob.out
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas       467 May 15 18:48 setup.sh.local
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas   1011339 May 15 18:48 agis_schedconf.cvmfs.json
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas         0 May 15 18:48 agis_ddmendpoints.agis.ALL.json
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas   1324701 May 15 18:48 cric_ddmendpoints.json
[2024-05-15 21:45:09] drwx------ 4 boincer umatlas      4096 May 15 18:48 pilot3
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas      6387 May 15 21:40 init_data.xml
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas 231281230 May 15 21:42 HITS.38776104._007920.pool.root.1
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas       532 May 15 21:42 boinc_task_state.xml
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas      1100 May 15 21:43 memory_monitor_summary.json
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas    365186 May 15 21:43 log.38776104._007920.job.log.tgz.1
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas        95 May 15 21:44 pilot_heartbeat.json
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas      7756 May 15 21:44 heartbeat.json
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas      4211 May 15 21:45 pilotlog.txt
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas    986205 May 15 21:45 log.38776104._007920.job.log.1
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas      8192 May 15 21:45 boinc_mmap_file
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas       357 May 15 21:45 output.list
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas        28 May 15 21:45 wrapper_checkpoint.txt
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas       620 May 15 21:45 runtime_log
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas   1372160 May 15 21:45 result.tar.gz
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas     11400 May 15 21:45 runtime_log.err
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas       649 May 15 21:45 QNLMDm3vYR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmRgOKDm9lW6pn.diag
[2024-05-15 21:45:09] -rw-r--r-- 1 boincer umatlas     21860 May 15 21:45 stderr.txt
[2024-05-15 21:45:09] HITS file was successfully produced:
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas 231281230 May 15 21:42 shared/HITS.pool.root.1
[2024-05-15 21:45:09]  *** Contents of shared directory: ***
[2024-05-15 21:45:09] total 816324
[2024-05-15 21:45:09] -rw-r--r-- 2 boincer umatlas 602743415 May 15 18:48 ATLAS.root_0
[2024-05-15 21:45:09] -rw-r--r-- 2 boincer umatlas     17537 May 15 18:48 start_atlas.sh
[2024-05-15 21:45:09] -rw-r--r-- 2 boincer umatlas    480004 May 15 18:48 input.tar.gz
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas 231281230 May 15 21:42 HITS.pool.root.1
[2024-05-15 21:45:09] -rw------- 1 boincer umatlas   1372160 May 15 21:45 result.tar.gz
21:45:10 (79028): run_atlas exited; CPU time 34604.299359
21:45:10 (79028): called boinc_finish(0)

</stderr_txt>
]]>

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