Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:37:58 (457344): wrapper (7.7.26015): starting
09:37:58 (457344): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 09:37:58] Arguments: --nthreads 4
[2024-05-18 09:37:58] Threads: 4
[2024-05-18 09:37:58] Checking for CVMFS
[2024-05-18 09:37:58] No cvmfs_config command found, will try listing directly
[2024-05-18 09:37:58] CVMFS is ok
[2024-05-18 09:37:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 09:37:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 09:37:58] Further information can be found at the LHC@home message board.
[2024-05-18 09:37:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 09:37:58] Checking for apptainer binary...
[2024-05-18 09:37:58] which: no apptainer in ((null))
[2024-05-18 09:37:58] apptainer is not installed, using version from CVMFS
[2024-05-18 09:37:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 09:37:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-05-18 09:37:59] apptainer works
[2024-05-18 09:37:59] Set ATHENA_PROC_NUMBER=4
[2024-05-18 09:37:59] Set ATHENA_CORE_NUMBER=4
[2024-05-18 09:37:59] Starting ATLAS job with PandaID=6206904029
[2024-05-18 09:37:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 11:37:22]  *** The last 200 lines of the pilot log: ***
[2024-05-18 11:37:22] 2024-05-18 09:37:08,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 11:37:22] 2024-05-18 09:37:08,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 11:37:22] 2024-05-18 09:37:08,147 | INFO     | fitting pss+swap vs Time
[2024-05-18 11:37:22] 2024-05-18 09:37:08,147 | INFO     | model: linear, x: [1716017912.0, 1716017973.0, 1716018034.0, 1716018095.0, 1716018156.0, 1716018217.0, 1716018278.0, 1716018339.0, 1716018400.0, 1716018461.0, 1716
[2024-05-18 11:37:22] 2024-05-18 09:37:08,147 | INFO     | sum of square deviations: 496597218.0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,148 | INFO     | sum of deviations: 22350360045.000004
[2024-05-18 11:37:22] 2024-05-18 09:37:08,148 | INFO     | mean x: 1716021450.0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,148 | INFO     | mean y: 2277358.7606837605
[2024-05-18 11:37:22] 2024-05-18 09:37:08,148 | INFO     | -- intersect: -77230731329.66692
[2024-05-18 11:37:22] 2024-05-18 09:37:08,148 | INFO     | intersect: -77230731329.66692
[2024-05-18 11:37:22] 2024-05-18 09:37:08,148 | INFO     | chi2: 4.623897728148766
[2024-05-18 11:37:22] 2024-05-18 09:37:08,148 | INFO     | model: linear, x: [1716017912.0, 1716017973.0, 1716018034.0, 1716018095.0, 1716018156.0, 1716018217.0, 1716018278.0, 1716018339.0, 1716018400.0, 1716018461.0, 1716
[2024-05-18 11:37:22] 2024-05-18 09:37:08,148 | INFO     | sum of square deviations: 435610028.0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,149 | INFO     | sum of deviations: 29133364723.000008
[2024-05-18 11:37:22] 2024-05-18 09:37:08,149 | INFO     | mean x: 1716021297.5
[2024-05-18 11:37:22] 2024-05-18 09:37:08,149 | INFO     | mean y: 2293657.9285714286
[2024-05-18 11:37:22] 2024-05-18 09:37:08,149 | INFO     | -- intersect: -114764289108.85568
[2024-05-18 11:37:22] 2024-05-18 09:37:08,149 | INFO     | intersect: -114764289108.85568
[2024-05-18 11:37:22] 2024-05-18 09:37:08,149 | INFO     | chi2: 3.7914663364100987
[2024-05-18 11:37:22] 2024-05-18 09:37:08,149 | INFO     | current chi2=3.7914663364100987 (change=18.002807170043987 %)
[2024-05-18 11:37:22] 2024-05-18 09:37:08,149 | INFO     | right removable region: 111
[2024-05-18 11:37:22] 2024-05-18 09:37:08,149 | INFO     | model: linear, x: [1716018217.0, 1716018278.0, 1716018339.0, 1716018400.0, 1716018461.0, 1716018522.0, 1716018583.0, 1716018644.0, 1716018705.0, 1716018766.0, 1716
[2024-05-18 11:37:22] 2024-05-18 09:37:08,149 | INFO     | sum of square deviations: 435610028.0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | sum of deviations: -2227569116.5
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | mean x: 1716021602.5
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | mean y: 2338455.6875
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | -- intersect: 8777519189.074654
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | intersect: 8777519189.074654
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | chi2: 2.3041652820697163
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | current chi2=2.3041652820697163 (change=50.168333783796356 %)
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | model: linear, x: [1716018522.0, 1716018583.0, 1716018644.0, 1716018705.0, 1716018766.0, 1716018827.0, 1716018888.0, 1716018949.0, 1716019010.0, 1716019071.0, 1716
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | sum of square deviations: 379832238.0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | sum of deviations: -20857150804.999996
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | mean x: 1716021755.0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | mean y: 2389412.3177570095
[2024-05-18 11:37:22] 2024-05-18 09:37:08,150 | INFO     | -- intersect: 94231685791.04103
[2024-05-18 11:37:22] 2024-05-18 09:37:08,151 | INFO     | intersect: 94231685791.04103
[2024-05-18 11:37:22] 2024-05-18 09:37:08,151 | INFO     | chi2: 1.0417129470657713
[2024-05-18 11:37:22] 2024-05-18 09:37:08,151 | INFO     | current chi2=1.0417129470657713 (change=54.79000767991553 %)
[2024-05-18 11:37:22] 2024-05-18 09:37:08,151 | INFO     | model: linear, x: [1716018827.0, 1716018888.0, 1716018949.0, 1716019010.0, 1716019071.0, 1716019132.0, 1716019193.0, 1716019254.0, 1716019315.0, 1716019376.0, 1716
[2024-05-18 11:37:22] 2024-05-18 09:37:08,151 | INFO     | sum of square deviations: 329031285.5
[2024-05-18 11:37:22] 2024-05-18 09:37:08,151 | INFO     | sum of deviations: -20877393167.0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,151 | INFO     | mean x: 1716021907.5
[2024-05-18 11:37:22] 2024-05-18 09:37:08,151 | INFO     | mean y: 2389262.4509803923
[2024-05-18 11:37:22] 2024-05-18 09:37:08,151 | INFO     | -- intersect: 108885846930.07391
[2024-05-18 11:37:22] 2024-05-18 09:37:08,151 | INFO     | intersect: 108885846930.07391
[2024-05-18 11:37:22] 2024-05-18 09:37:08,151 | INFO     | chi2: 1.00339058523796
[2024-05-18 11:37:22] 2024-05-18 09:37:08,151 | INFO     | current chi2=1.00339058523796 (change=3.6787832901333473 %)
[2024-05-18 11:37:22] 2024-05-18 09:37:08,152 | INFO     | left removable region: 30
[2024-05-18 11:37:22] 2024-05-18 09:37:08,152 | INFO     | model: linear, x: [1716019742.0, 1716019803.0, 1716019864.0, 1716019925.0, 1716019986.0, 1716020047.0, 1716020108.0, 1716020169.0, 1716020230.0, 1716020291.0, 1716
[2024-05-18 11:37:22] 2024-05-18 09:37:08,152 | INFO     | sum of square deviations: 164765880.0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,152 | INFO     | sum of deviations: -4624709815.0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,152 | INFO     | mean x: 1716022182.0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,152 | INFO     | mean y: 2378985.074074074
[2024-05-18 11:37:22] 2024-05-18 09:37:08,152 | INFO     | -- intersect: 48168325890.180374
[2024-05-18 11:37:22] 2024-05-18 09:37:08,152 | INFO     | intersect: 48168325890.180374
[2024-05-18 11:37:22] 2024-05-18 09:37:08,152 | INFO     | chi2: 0.06656131996314488
[2024-05-18 11:37:22] 2024-05-18 09:37:08,152 | INFO     | -- intersect: 48168325890.180374
[2024-05-18 11:37:22] 2024-05-18 09:37:08,152 | INFO     | current memory leak: -28.07 B/s (using 81 data points, chi2=0.07)
[2024-05-18 11:37:22] 2024-05-18 09:37:08,153 | INFO     | ..............................
[2024-05-18 11:37:22] 2024-05-18 09:37:08,153 | INFO     | . Timing measurements:
[2024-05-18 11:37:22] 2024-05-18 09:37:08,153 | INFO     | . get job = 0 s
[2024-05-18 11:37:22] 2024-05-18 09:37:08,153 | INFO     | . initial setup = 2 s
[2024-05-18 11:37:22] 2024-05-18 09:37:08,153 | INFO     | . payload setup = 4 s
[2024-05-18 11:37:22] 2024-05-18 09:37:08,153 | INFO     | . stage-in = 0 s
[2024-05-18 11:37:22] 2024-05-18 09:37:08,153 | INFO     | . payload execution = 7103 s
[2024-05-18 11:37:22] 2024-05-18 09:37:08,153 | INFO     | . stage-out = 0 s
[2024-05-18 11:37:22] 2024-05-18 09:37:08,153 | INFO     | . log creation = 0 s
[2024-05-18 11:37:22] 2024-05-18 09:37:08,153 | INFO     | ..............................
[2024-05-18 11:37:22] 2024-05-18 09:37:08,201 | INFO     | 
[2024-05-18 11:37:22] 2024-05-18 09:37:08,201 | INFO     | job summary report
[2024-05-18 11:37:22] 2024-05-18 09:37:08,201 | INFO     | --------------------------------------------------
[2024-05-18 11:37:22] 2024-05-18 09:37:08,201 | INFO     | PanDA job id: 6206904029
[2024-05-18 11:37:22] 2024-05-18 09:37:08,201 | INFO     | task id: 38776104
[2024-05-18 11:37:22] 2024-05-18 09:37:08,201 | INFO     | errors: (none)
[2024-05-18 11:37:22] 2024-05-18 09:37:08,201 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 11:37:22] 2024-05-18 09:37:08,201 | INFO     | pilot state: finished 
[2024-05-18 11:37:22] 2024-05-18 09:37:08,201 | INFO     | transexitcode: 0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,201 | INFO     | exeerrorcode: 0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | exeerrordiag: 
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | exitcode: 0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | exitmsg: OK
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | cpuconsumptiontime: 25605 s
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | nevents: 400
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | neventsw: 0
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | pid: 468745
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | pgrp: 468745
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | corecount: 4
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | event service: False
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | sizes: {0: 2390693, 1: 2392240, 5: 2392446, 12: 2392502, 7111: 2419789, 7113: 2428771, 7116: 2428955, 7124: 2429125}
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | --------------------------------------------------
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | 
[2024-05-18 11:37:22] 2024-05-18 09:37:08,202 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-05-18 11:37:22] 2024-05-18 09:37:08,224 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,224 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,224 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,224 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | job 6206904029 has completed (purged errors)
[2024-05-18 11:37:22] 2024-05-18 09:37:08,225 | INFO     | overall cleanup function is called
[2024-05-18 11:37:22] 2024-05-18 09:37:09,232 | INFO     | --- collectZombieJob: --- 10, [468745]
[2024-05-18 11:37:22] 2024-05-18 09:37:09,232 | INFO     | zombie collector waiting for pid 468745
[2024-05-18 11:37:22] 2024-05-18 09:37:09,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 11:37:22] 2024-05-18 09:37:10,237 | INFO     | collected zombie processes
[2024-05-18 11:37:22] 2024-05-18 09:37:10,237 | INFO     | will now attempt to kill all subprocesses of pid=468745
[2024-05-18 11:37:22] 2024-05-18 09:37:10,383 | INFO     | process IDs to be killed: [468745] (in reverse order)
[2024-05-18 11:37:22] 2024-05-18 09:37:10,493 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 11:37:22] 2024-05-18 09:37:10,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 11:37:22] 2024-05-18 09:37:10,503 | INFO     | did not find any defunct processes belonging to 468745
[2024-05-18 11:37:22] 2024-05-18 09:37:10,511 | INFO     | did not find any defunct processes belonging to 468745
[2024-05-18 11:37:22] 2024-05-18 09:37:10,511 | INFO     | ready for new job
[2024-05-18 11:37:22] 2024-05-18 09:37:10,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 11:37:22] 2024-05-18 09:37:10,512 | INFO     | *************************************
[2024-05-18 11:37:22] 2024-05-18 09:37:10,513 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 11:37:22] 2024-05-18 09:37:10,513 | INFO     | *************************************
[2024-05-18 11:37:22] 2024-05-18 09:37:10,513 | INFO     | 
[2024-05-18 11:37:22] 2024-05-18 09:37:10,516 | INFO     | architecture information:
[2024-05-18 11:37:22] 2024-05-18 09:37:10,516 | INFO     | executing command: cat /etc/os-release
[2024-05-18 11:37:22] 2024-05-18 09:37:10,531 | INFO     | cat /etc/os-release:
[2024-05-18 11:37:22] NAME="CentOS Linux"
[2024-05-18 11:37:22] VERSION="7 (Core)"
[2024-05-18 11:37:22] ID="centos"
[2024-05-18 11:37:22] ID_LIKE="rhel fedora"
[2024-05-18 11:37:22] VERSION_ID="7"
[2024-05-18 11:37:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 11:37:22] ANSI_COLOR="0;31"
[2024-05-18 11:37:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 11:37:22] HOME_URL="https://www.centos.org/"
[2024-05-18 11:37:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 11:37:22] 
[2024-05-18 11:37:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 11:37:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 11:37:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 11:37:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 11:37:22] 
[2024-05-18 11:37:22] 2024-05-18 09:37:10,532 | INFO     | *************************************
[2024-05-18 11:37:22] 2024-05-18 09:37:11,035 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-05-18 11:37:22] 2024-05-18 09:37:11,063 | INFO     | sufficient remaining disk space (561510350848 B)
[2024-05-18 11:37:22] 2024-05-18 09:37:11,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 11:37:22] 2024-05-18 09:37:11,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 11:37:22] 2024-05-18 09:37:11,064 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 11:37:22] 2024-05-18 09:37:11,065 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 11:37:22] 2024-05-18 09:37:11,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 11:37:22] 2024-05-18 09:37:11,066 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 11:37:22] 2024-05-18 09:37:11,066 | INFO     | aborting loop
[2024-05-18 11:37:22] 2024-05-18 09:37:11,066 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 11:37:22] 2024-05-18 09:37:11,067 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 11:37:22] 2024-05-18 09:37:11,424 | INFO     | all payload control threads have been joined
[2024-05-18 11:37:22] 2024-05-18 09:37:11,914 | INFO     | all data control threads have been joined
[2024-05-18 11:37:22] 2024-05-18 09:37:12,069 | INFO     | [job] retrieve thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:12,072 | INFO     | [job] job monitor thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:12,170 | INFO     | [payload] validate_post thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:12,264 | INFO     | [data] copytool_in thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:12,318 | INFO     | [payload] failed_post thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:12,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 11:37:22] 2024-05-18 09:37:12,429 | INFO     | [payload] control thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:12,464 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:12,504 | INFO     | all job control threads have been joined
[2024-05-18 11:37:22] 2024-05-18 09:37:12,562 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:12,800 | INFO     | [job] validate thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:12,919 | INFO     | [data] control thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:12,986 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:13,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 11:37:22] 2024-05-18 09:37:13,233 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:13,509 | INFO     | [job] control thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:14,216 | INFO     | [job] queue monitor thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:14,428 | INFO     | [data] copytool_out thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:15,067 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 11:37:22] 2024-05-18 09:37:16,531 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47224942769216)>', '<ExcThread(monitor, started 47225451321088)>']
[2024-05-18 11:37:22] 2024-05-18 09:37:17,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 11:37:22] 2024-05-18 09:37:17,097 | INFO     | [monitor] control thread has ended
[2024-05-18 11:37:22] 2024-05-18 09:37:21,557 | INFO     | all workflow threads have been joined
[2024-05-18 11:37:22] 2024-05-18 09:37:21,557 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 11:37:22] 2024-05-18 09:37:21,557 | INFO     | traces error code: 0
[2024-05-18 11:37:22] 2024-05-18 09:37:21,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 11:37:22] 2024-05-18 09:37:21,634 [wrapper] ==== pilot stdout END ====
[2024-05-18 11:37:22] 2024-05-18 09:37:21,636 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 11:37:22] 2024-05-18 09:37:21,639 [wrapper] pilotpid: 461698
[2024-05-18 11:37:22] 2024-05-18 09:37:21,641 [wrapper] Pilot exit status: 0
[2024-05-18 11:37:22] 2024-05-18 09:37:21,649 [wrapper] pandaids: 6206904029
[2024-05-18 11:37:22] 2024-05-18 09:37:21,716 [wrapper] cleanup: SIGTERM to supervisor_pilot  614257 461699
[2024-05-18 11:37:22] 2024-05-18 09:37:21,718 [wrapper] Test setup, not cleaning
[2024-05-18 11:37:22] 2024-05-18 09:37:21,721 [wrapper] ==== wrapper stdout END ====
[2024-05-18 11:37:22] 2024-05-18 09:37:21,723 [wrapper] ==== wrapper stderr END ====
[2024-05-18 11:37:22] 2024-05-18 09:37:21,728 [wrapper] apfmon messages muted
[2024-05-18 11:37:22]  *** Error codes and diagnostics ***
[2024-05-18 11:37:22]     "exeErrorCode": 0,
[2024-05-18 11:37:22]     "exeErrorDiag": "",
[2024-05-18 11:37:22]     "pilotErrorCode": 0,
[2024-05-18 11:37:22]     "pilotErrorDiag": "",
[2024-05-18 11:37:22]  *** Listing of results directory ***
[2024-05-18 11:37:22] total 817468
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc    467845 May 15 20:25 pilot3.tar.gz
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc      5633 May 15 20:37 queuedata.json
[2024-05-18 11:37:22] -rwx------ 1 boinc boinc     32251 May 15 20:38 runpilot2-wrapper.sh
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc       100 May 18 09:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 11:37:22] -rwxr-xr-x 1 boinc boinc      7986 May 18 09:37 run_atlas
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc       105 May 18 09:37 job.xml
[2024-05-18 11:37:22] -rw-r--r-- 2 boinc boinc     17537 May 18 09:37 start_atlas.sh
[2024-05-18 11:37:22] drwxrwx--x 2 boinc boinc      4096 May 18 09:37 shared
[2024-05-18 11:37:22] -rw-r--r-- 2 boinc boinc    480002 May 18 09:37 input.tar.gz
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc      6663 May 18 09:37 init_data.xml
[2024-05-18 11:37:22] -rw-r--r-- 2 boinc boinc 601538516 May 18 09:37 EVNT.38776100._000312.pool.root.1
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc         0 May 18 09:37 boinc_lockfile
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc      2640 May 18 09:37 pandaJob.out
[2024-05-18 11:37:22] -rw------- 1 boinc boinc       424 May 18 09:37 setup.sh.local
[2024-05-18 11:37:22] -rw------- 1 boinc boinc   1019073 May 18 09:38 agis_schedconf.cvmfs.json
[2024-05-18 11:37:22] -rw------- 1 boinc boinc         0 May 18 09:38 agis_ddmendpoints.agis.ALL.json
[2024-05-18 11:37:22] -rw------- 1 boinc boinc   1324701 May 18 09:38 cric_ddmendpoints.json
[2024-05-18 11:37:22] drwx------ 4 boinc boinc      4096 May 18 09:38 pilot3
[2024-05-18 11:37:22] -rw------- 1 boinc boinc 230044907 May 18 11:36 HITS.38776104._007784.pool.root.1
[2024-05-18 11:37:22] -rw------- 1 boinc boinc        95 May 18 11:36 pilot_heartbeat.json
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc       530 May 18 11:36 boinc_task_state.xml
[2024-05-18 11:37:22] -rw------- 1 boinc boinc      1065 May 18 11:36 memory_monitor_summary.json
[2024-05-18 11:37:22] -rw------- 1 boinc boinc    261622 May 18 11:36 log.38776104._007784.job.log.tgz.1
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc      8192 May 18 11:37 boinc_mmap_file
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc        27 May 18 11:37 wrapper_checkpoint.txt
[2024-05-18 11:37:22] -rw------- 1 boinc boinc      7770 May 18 11:37 heartbeat.json
[2024-05-18 11:37:22] -rw------- 1 boinc boinc      4344 May 18 11:37 pilotlog.txt
[2024-05-18 11:37:22] -rw------- 1 boinc boinc    726807 May 18 11:37 log.38776104._007784.job.log.1
[2024-05-18 11:37:22] -rw------- 1 boinc boinc       357 May 18 11:37 output.list
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc       620 May 18 11:37 runtime_log
[2024-05-18 11:37:22] -rw------- 1 boinc boinc   1003520 May 18 11:37 result.tar.gz
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc     11409 May 18 11:37 runtime_log.err
[2024-05-18 11:37:22] -rw------- 1 boinc boinc       655 May 18 11:37 7LHLDmMhYR5n7Olcko1bjSoqABFKDmABFKDmOtvXDmOuYKDmddIz6n.diag
[2024-05-18 11:37:22] -rw-r--r-- 1 boinc boinc     21313 May 18 11:37 stderr.txt
[2024-05-18 11:37:22] HITS file was successfully produced:
[2024-05-18 11:37:22] -rw------- 1 boinc boinc 230044907 May 18 11:36 shared/HITS.pool.root.1
[2024-05-18 11:37:22]  *** Contents of shared directory: ***
[2024-05-18 11:37:22] total 813576
[2024-05-18 11:37:22] -rw-r--r-- 2 boinc boinc     17537 May 18 09:37 start_atlas.sh
[2024-05-18 11:37:22] -rw-r--r-- 2 boinc boinc    480002 May 18 09:37 input.tar.gz
[2024-05-18 11:37:22] -rw-r--r-- 2 boinc boinc 601538516 May 18 09:37 ATLAS.root_0
[2024-05-18 11:37:22] -rw------- 1 boinc boinc 230044907 May 18 11:36 HITS.pool.root.1
[2024-05-18 11:37:22] -rw------- 1 boinc boinc   1003520 May 18 11:37 result.tar.gz
11:37:23 (457344): run_atlas exited; CPU time 25358.258127
11:37:23 (457344): called boinc_finish(0)

</stderr_txt>
]]>

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