Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:53:43 (2822513): wrapper (7.7.26015): starting
09:53:43 (2822513): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 09:53:43] Arguments: --nthreads 4
[2024-05-19 09:53:43] Threads: 4
[2024-05-19 09:53:43] Checking for CVMFS
[2024-05-19 09:53:43] No cvmfs_config command found, will try listing directly
[2024-05-19 09:53:43] CVMFS is ok
[2024-05-19 09:53:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 09:53:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 09:53:43] Further information can be found at the LHC@home message board.
[2024-05-19 09:53:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 09:53:43] Checking for apptainer binary...
[2024-05-19 09:53:43] which: no apptainer in ((null))
[2024-05-19 09:53:43] apptainer is not installed, using version from CVMFS
[2024-05-19 09:53:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 09:53:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-05-19 09:53:44] apptainer works
[2024-05-19 09:53:44] Set ATHENA_PROC_NUMBER=4
[2024-05-19 09:53:44] Set ATHENA_CORE_NUMBER=4
[2024-05-19 09:53:44] Starting ATLAS job with PandaID=6206903966
[2024-05-19 09:53:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 12:19:44]  *** The last 200 lines of the pilot log: ***
[2024-05-19 12:19:44] 2024-05-19 10:19:21,840 | INFO     | model: linear, x: [1716106475.0, 1716106536.0, 1716106597.0, 1716106658.0, 1716106719.0, 1716106780.0, 1716106841.0, 1716106902.0, 1716106963.0, 1716107024.0, 1716
[2024-05-19 12:19:44] 2024-05-19 10:19:21,840 | INFO     | sum of square deviations: 576985702.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,840 | INFO     | sum of deviations: 1315646048.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,841 | INFO     | mean x: 1716110196.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,841 | INFO     | mean y: 2338757.4471544717
[2024-05-19 12:19:44] 2024-05-19 10:19:21,841 | INFO     | -- intersect: -3910745378.7346215
[2024-05-19 12:19:44] 2024-05-19 10:19:21,841 | INFO     | intersect: -3910745378.7346215
[2024-05-19 12:19:44] 2024-05-19 10:19:21,841 | INFO     | chi2: 0.000356677950792148
[2024-05-19 12:19:44] 2024-05-19 10:19:21,841 | INFO     | current chi2=0.000356677950792148 (change=82.5387178442158 %)
[2024-05-19 12:19:44] 2024-05-19 10:19:21,841 | INFO     | model: linear, x: [1716106780.0, 1716106841.0, 1716106902.0, 1716106963.0, 1716107024.0, 1716107085.0, 1716107146.0, 1716107207.0, 1716107268.0, 1716107329.0, 1716
[2024-05-19 12:19:44] 2024-05-19 10:19:21,841 | INFO     | sum of square deviations: 509440249.5
[2024-05-19 12:19:44] 2024-05-19 10:19:21,842 | INFO     | sum of deviations: 952450584.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,842 | INFO     | mean x: 1716110348.5
[2024-05-19 12:19:44] 2024-05-19 10:19:21,842 | INFO     | mean y: 2339576.338983051
[2024-05-19 12:19:44] 2024-05-19 10:19:21,842 | INFO     | -- intersect: -3206104014.9192467
[2024-05-19 12:19:44] 2024-05-19 10:19:21,842 | INFO     | intersect: -3206104014.9192467
[2024-05-19 12:19:44] 2024-05-19 10:19:21,843 | INFO     | chi2: 0.00021976247011104054
[2024-05-19 12:19:44] 2024-05-19 10:19:21,843 | INFO     | current chi2=0.00021976247011104054 (change=38.38630349227675 %)
[2024-05-19 12:19:44] 2024-05-19 10:19:21,843 | INFO     | model: linear, x: [1716107085.0, 1716107146.0, 1716107207.0, 1716107268.0, 1716107329.0, 1716107390.0, 1716107451.0, 1716107512.0, 1716107573.0, 1716107634.0, 1716
[2024-05-19 12:19:44] 2024-05-19 10:19:21,843 | INFO     | sum of square deviations: 447383272.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,844 | INFO     | sum of deviations: 659078769.9999998
[2024-05-19 12:19:44] 2024-05-19 10:19:21,844 | INFO     | mean x: 1716110501.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,844 | INFO     | mean y: 2340297.115044248
[2024-05-19 12:19:44] 2024-05-19 10:19:21,844 | INFO     | -- intersect: -2525809656.1160264
[2024-05-19 12:19:44] 2024-05-19 10:19:21,844 | INFO     | intersect: -2525809656.1160264
[2024-05-19 12:19:44] 2024-05-19 10:19:21,844 | INFO     | chi2: 0.00011368007384381595
[2024-05-19 12:19:44] 2024-05-19 10:19:21,844 | INFO     | current chi2=0.00011368007384381595 (change=48.27138874696111 %)
[2024-05-19 12:19:44] 2024-05-19 10:19:21,845 | INFO     | model: linear, x: [1716107390.0, 1716107451.0, 1716107512.0, 1716107573.0, 1716107634.0, 1716107695.0, 1716107756.0, 1716107817.0, 1716107878.0, 1716107939.0, 1716
[2024-05-19 12:19:44] 2024-05-19 10:19:21,845 | INFO     | sum of square deviations: 390582207.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,845 | INFO     | sum of deviations: 417524382.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,845 | INFO     | mean x: 1716110653.5
[2024-05-19 12:19:44] 2024-05-19 10:19:21,845 | INFO     | mean y: 2340942.574074074
[2024-05-19 12:19:44] 2024-05-19 10:19:21,845 | INFO     | -- intersect: -1832146208.1583288
[2024-05-19 12:19:44] 2024-05-19 10:19:21,846 | INFO     | intersect: -1832146208.1583288
[2024-05-19 12:19:44] 2024-05-19 10:19:21,846 | INFO     | chi2: 6.881329178916223e-06
[2024-05-19 12:19:44] 2024-05-19 10:19:21,846 | INFO     | current chi2=6.881329178916223e-06 (change=93.94675870076367 %)
[2024-05-19 12:19:44] 2024-05-19 10:19:21,846 | INFO     | model: linear, x: [1716107695.0, 1716107756.0, 1716107817.0, 1716107878.0, 1716107939.0, 1716108000.0, 1716108061.0, 1716108122.0, 1716108183.0, 1716108244.0, 1716
[2024-05-19 12:19:44] 2024-05-19 10:19:21,846 | INFO     | sum of square deviations: 338804492.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,847 | INFO     | sum of deviations: 362939325.00000006
[2024-05-19 12:19:44] 2024-05-19 10:19:21,847 | INFO     | mean x: 1716110806.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,847 | INFO     | mean y: 2341103.427184466
[2024-05-19 12:19:44] 2024-05-19 10:19:21,847 | INFO     | -- intersect: -1836017337.0944543
[2024-05-19 12:19:44] 2024-05-19 10:19:21,847 | INFO     | intersect: -1836017337.0944543
[2024-05-19 12:19:44] 2024-05-19 10:19:21,847 | INFO     | chi2: 6.874493727432378e-06
[2024-05-19 12:19:44] 2024-05-19 10:19:21,847 | INFO     | current chi2=6.874493727432378e-06 (change=0.09933330183924902 %)
[2024-05-19 12:19:44] 2024-05-19 10:19:21,847 | INFO     | left removable region: 80
[2024-05-19 12:19:44] 2024-05-19 10:19:21,848 | INFO     | model: linear, x: [1716110135.0, 1716110196.0, 1716110257.0, 1716110318.0, 1716110379.0, 1716110440.0, 1716110501.0, 1716110562.0, 1716110623.0, 1716110684.0, 1716
[2024-05-19 12:19:44] 2024-05-19 10:19:21,848 | INFO     | sum of square deviations: 57407588.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,848 | INFO     | sum of deviations: 56860052.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,848 | INFO     | mean x: 1716111843.0
[2024-05-19 12:19:44] 2024-05-19 10:19:21,848 | INFO     | mean y: 2342365.9122807016
[2024-05-19 12:19:44] 2024-05-19 10:19:21,848 | INFO     | -- intersect: -1697401727.6872594
[2024-05-19 12:19:44] 2024-05-19 10:19:21,848 | INFO     | intersect: -1697401727.6872594
[2024-05-19 12:19:44] 2024-05-19 10:19:21,848 | INFO     | chi2: 3.5748769038813696e-06
[2024-05-19 12:19:44] 2024-05-19 10:19:21,849 | INFO     | -- intersect: -1697401727.6872594
[2024-05-19 12:19:44] 2024-05-19 10:19:21,849 | INFO     | current memory leak: 0.99 B/s (using 57 data points, chi2=0.00)
[2024-05-19 12:19:44] 2024-05-19 10:19:21,849 | INFO     | ..............................
[2024-05-19 12:19:44] 2024-05-19 10:19:21,850 | INFO     | . Timing measurements:
[2024-05-19 12:19:44] 2024-05-19 10:19:21,850 | INFO     | . get job = 0 s
[2024-05-19 12:19:44] 2024-05-19 10:19:21,850 | INFO     | . initial setup = 1 s
[2024-05-19 12:19:44] 2024-05-19 10:19:21,850 | INFO     | . payload setup = 4 s
[2024-05-19 12:19:44] 2024-05-19 10:19:21,850 | INFO     | . stage-in = 0 s
[2024-05-19 12:19:44] 2024-05-19 10:19:21,850 | INFO     | . payload execution = 8701 s
[2024-05-19 12:19:44] 2024-05-19 10:19:21,850 | INFO     | . stage-out = 0 s
[2024-05-19 12:19:44] 2024-05-19 10:19:21,850 | INFO     | . log creation = 0 s
[2024-05-19 12:19:44] 2024-05-19 10:19:21,850 | INFO     | ..............................
[2024-05-19 12:19:44] 2024-05-19 10:19:22,059 | WARNING  | process 2833920 is no longer using CPU - aborting
[2024-05-19 12:19:44] 2024-05-19 10:19:22,059 | INFO     | aborting job monitoring since job object (job id=6206903966) has expired
[2024-05-19 12:19:44] 2024-05-19 10:19:22,294 | INFO     | 
[2024-05-19 12:19:44] 2024-05-19 10:19:22,295 | INFO     | job summary report
[2024-05-19 12:19:44] 2024-05-19 10:19:22,295 | INFO     | --------------------------------------------------
[2024-05-19 12:19:44] 2024-05-19 10:19:22,295 | INFO     | PanDA job id: 6206903966
[2024-05-19 12:19:44] 2024-05-19 10:19:22,295 | INFO     | task id: 38776104
[2024-05-19 12:19:44] 2024-05-19 10:19:22,295 | INFO     | errors: (none)
[2024-05-19 12:19:44] 2024-05-19 10:19:22,295 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 12:19:44] 2024-05-19 10:19:22,296 | INFO     | pilot state: finished 
[2024-05-19 12:19:44] 2024-05-19 10:19:22,296 | INFO     | transexitcode: 0
[2024-05-19 12:19:44] 2024-05-19 10:19:22,296 | INFO     | exeerrorcode: 0
[2024-05-19 12:19:44] 2024-05-19 10:19:22,296 | INFO     | exeerrordiag: 
[2024-05-19 12:19:44] 2024-05-19 10:19:22,296 | INFO     | exitcode: 0
[2024-05-19 12:19:44] 2024-05-19 10:19:22,296 | INFO     | exitmsg: OK
[2024-05-19 12:19:44] 2024-05-19 10:19:22,296 | INFO     | cpuconsumptiontime: 32157 s
[2024-05-19 12:19:44] 2024-05-19 10:19:22,296 | INFO     | nevents: 400
[2024-05-19 12:19:44] 2024-05-19 10:19:22,296 | INFO     | neventsw: 0
[2024-05-19 12:19:44] 2024-05-19 10:19:22,296 | INFO     | pid: 2833920
[2024-05-19 12:19:44] 2024-05-19 10:19:22,296 | INFO     | pgrp: 2833920
[2024-05-19 12:19:44] 2024-05-19 10:19:22,297 | INFO     | corecount: 4
[2024-05-19 12:19:44] 2024-05-19 10:19:22,297 | INFO     | event service: False
[2024-05-19 12:19:44] 2024-05-19 10:19:22,297 | INFO     | sizes: {0: 2391306, 1: 2392241, 4: 2392447, 11: 2392475, 8709: 2420607, 8710: 2429773, 8715: 2429887}
[2024-05-19 12:19:44] 2024-05-19 10:19:22,297 | INFO     | --------------------------------------------------
[2024-05-19 12:19:44] 2024-05-19 10:19:22,297 | INFO     | 
[2024-05-19 12:19:44] 2024-05-19 10:19:22,297 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2024-05-19 12:19:44] 2024-05-19 10:19:22,320 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,321 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,321 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,321 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,321 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,321 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,321 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,321 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,321 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,321 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,321 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,322 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,322 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,322 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,322 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,322 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,322 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,322 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 12:19:44] 2024-05-19 10:19:22,322 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,322 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 12:19:44] 2024-05-19 10:19:22,322 | INFO     | job 6206903966 has completed (purged errors)
[2024-05-19 12:19:44] 2024-05-19 10:19:22,323 | INFO     | overall cleanup function is called
[2024-05-19 12:19:44] 2024-05-19 10:19:23,330 | INFO     | --- collectZombieJob: --- 10, [2833920]
[2024-05-19 12:19:44] 2024-05-19 10:19:23,330 | INFO     | zombie collector waiting for pid 2833920
[2024-05-19 12:19:44] 2024-05-19 10:19:23,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 12:19:44] 2024-05-19 10:19:24,335 | INFO     | collected zombie processes
[2024-05-19 12:19:44] 2024-05-19 10:19:24,336 | INFO     | will now attempt to kill all subprocesses of pid=2833920
[2024-05-19 12:19:44] 2024-05-19 10:19:24,482 | INFO     | process IDs to be killed: [2833920] (in reverse order)
[2024-05-19 12:19:44] 2024-05-19 10:19:24,597 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 12:19:44] 2024-05-19 10:19:24,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 12:19:44] 2024-05-19 10:19:24,608 | INFO     | did not find any defunct processes belonging to 2833920
[2024-05-19 12:19:44] 2024-05-19 10:19:24,615 | INFO     | did not find any defunct processes belonging to 2833920
[2024-05-19 12:19:44] 2024-05-19 10:19:24,615 | INFO     | ready for new job
[2024-05-19 12:19:44] 2024-05-19 10:19:24,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 12:19:44] 2024-05-19 10:19:24,617 | INFO     | *************************************
[2024-05-19 12:19:44] 2024-05-19 10:19:24,618 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 12:19:44] 2024-05-19 10:19:24,618 | INFO     | *************************************
[2024-05-19 12:19:44] 2024-05-19 10:19:24,618 | INFO     | 
[2024-05-19 12:19:44] 2024-05-19 10:19:24,621 | INFO     | architecture information:
[2024-05-19 12:19:44] 2024-05-19 10:19:24,621 | INFO     | executing command: cat /etc/os-release
[2024-05-19 12:19:44] 2024-05-19 10:19:24,633 | INFO     | cat /etc/os-release:
[2024-05-19 12:19:44] NAME="CentOS Linux"
[2024-05-19 12:19:44] VERSION="7 (Core)"
[2024-05-19 12:19:44] ID="centos"
[2024-05-19 12:19:44] ID_LIKE="rhel fedora"
[2024-05-19 12:19:44] VERSION_ID="7"
[2024-05-19 12:19:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 12:19:44] ANSI_COLOR="0;31"
[2024-05-19 12:19:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 12:19:44] HOME_URL="https://www.centos.org/"
[2024-05-19 12:19:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 12:19:44] 
[2024-05-19 12:19:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 12:19:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 12:19:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 12:19:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 12:19:44] 
[2024-05-19 12:19:44] 2024-05-19 10:19:24,633 | INFO     | *************************************
[2024-05-19 12:19:44] 2024-05-19 10:19:25,136 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2024-05-19 12:19:44] 2024-05-19 10:19:25,154 | INFO     | sufficient remaining disk space (581691244544 B)
[2024-05-19 12:19:44] 2024-05-19 10:19:25,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 12:19:44] 2024-05-19 10:19:25,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 12:19:44] 2024-05-19 10:19:25,155 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 12:19:44] 2024-05-19 10:19:25,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 12:19:44] 2024-05-19 10:19:25,156 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 12:19:44] 2024-05-19 10:19:25,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 12:19:44] 2024-05-19 10:19:25,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 12:19:44] 2024-05-19 10:19:25,552 | INFO     | all data control threads have been joined
[2024-05-19 12:19:44] 2024-05-19 10:19:25,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 12:19:44] 2024-05-19 10:19:25,568 | INFO     | aborting loop
[2024-05-19 12:19:44] 2024-05-19 10:19:25,951 | INFO     | all job control threads have been joined
[2024-05-19 12:19:44] 2024-05-19 10:19:26,008 | INFO     | all payload control threads have been joined
[2024-05-19 12:19:44] 2024-05-19 10:19:26,160 | INFO     | [job] retrieve thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:26,197 | INFO     | [job] validate thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:26,411 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:26,557 | INFO     | [data] control thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:26,572 | INFO     | [job] job monitor thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:26,632 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:26,681 | INFO     | [payload] validate_post thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:26,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 12:19:44] 2024-05-19 10:19:26,941 | INFO     | [data] copytool_in thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:26,956 | INFO     | [job] control thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:27,013 | INFO     | [payload] control thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:27,075 | INFO     | [payload] failed_post thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:27,156 | INFO     | [data] copytool_out thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:27,530 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:27,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 12:19:44] 2024-05-19 10:19:27,930 | INFO     | [job] queue monitor thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:31,883 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:35,767 | INFO     | job.realtimelogging is not enabled
[2024-05-19 12:19:44] 2024-05-19 10:19:36,773 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 12:19:44] 2024-05-19 10:19:38,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47605903717440)>', '<ExcThread(monitor, started 47606077069056)>']
[2024-05-19 12:19:44] 2024-05-19 10:19:39,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 12:19:44] 2024-05-19 10:19:39,218 | INFO     | [monitor] control thread has ended
[2024-05-19 12:19:44] 2024-05-19 10:19:43,629 | INFO     | all workflow threads have been joined
[2024-05-19 12:19:44] 2024-05-19 10:19:43,630 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 12:19:44] 2024-05-19 10:19:43,630 | INFO     | traces error code: 0
[2024-05-19 12:19:44] 2024-05-19 10:19:43,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 12:19:44] 2024-05-19 10:19:43,709 [wrapper] ==== pilot stdout END ====
[2024-05-19 12:19:44] 2024-05-19 10:19:43,711 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 12:19:44] 2024-05-19 10:19:43,712 [wrapper] pilotpid: 2826906
[2024-05-19 12:19:44] 2024-05-19 10:19:43,714 [wrapper] Pilot exit status: 0
[2024-05-19 12:19:44] 2024-05-19 10:19:43,721 [wrapper] pandaids: 6206903966
[2024-05-19 12:19:44] 2024-05-19 10:19:43,787 [wrapper] cleanup: SIGTERM to supervisor_pilot 3129370 2826907
[2024-05-19 12:19:44] 2024-05-19 10:19:43,789 [wrapper] Test setup, not cleaning
[2024-05-19 12:19:44] 2024-05-19 10:19:43,791 [wrapper] ==== wrapper stdout END ====
[2024-05-19 12:19:44] 2024-05-19 10:19:43,792 [wrapper] ==== wrapper stderr END ====
[2024-05-19 12:19:44] 2024-05-19 10:19:43,796 [wrapper] apfmon messages muted
[2024-05-19 12:19:44]  *** Error codes and diagnostics ***
[2024-05-19 12:19:44]     "exeErrorCode": 0,
[2024-05-19 12:19:44]     "exeErrorDiag": "",
[2024-05-19 12:19:44]     "pilotErrorCode": 0,
[2024-05-19 12:19:44]     "pilotErrorDiag": "",
[2024-05-19 12:19:44]  *** Listing of results directory ***
[2024-05-19 12:19:44] total 971792
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc    467845 May 15 20:25 pilot3.tar.gz
[2024-05-19 12:19:44] -rwx------ 1 boinc boinc     32251 May 15 20:34 runpilot2-wrapper.sh
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc      5633 May 15 20:34 queuedata.json
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc       100 May 19 03:33 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 12:19:44] -rwxr-xr-x 1 boinc boinc      7986 May 19 03:33 run_atlas
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc       105 May 19 03:33 job.xml
[2024-05-19 12:19:44] -rw------- 2 boinc boinc 152961024 May 19 03:46 copy_3mM0H8
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc      6663 May 19 09:53 init_data.xml
[2024-05-19 12:19:44] -rw-r--r-- 2 boinc boinc 602838123 May 19 09:53 EVNT.38776100._000309.pool.root.1
[2024-05-19 12:19:44] -rw-r--r-- 2 boinc boinc     17537 May 19 09:53 start_atlas.sh
[2024-05-19 12:19:44] drwxrwx--x 2 boinc boinc      4096 May 19 09:53 shared
[2024-05-19 12:19:44] -rw-r--r-- 2 boinc boinc    479997 May 19 09:53 input.tar.gz
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc         0 May 19 09:53 boinc_lockfile
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc      2641 May 19 09:53 pandaJob.out
[2024-05-19 12:19:44] -rw------- 1 boinc boinc       424 May 19 09:53 setup.sh.local
[2024-05-19 12:19:44] -rw------- 1 boinc boinc   1013987 May 19 09:53 agis_schedconf.cvmfs.json
[2024-05-19 12:19:44] -rw------- 1 boinc boinc         0 May 19 09:53 agis_ddmendpoints.agis.ALL.json
[2024-05-19 12:19:44] -rw------- 1 boinc boinc   1324701 May 19 09:53 cric_ddmendpoints.json
[2024-05-19 12:19:44] drwx------ 4 boinc boinc      4096 May 19 09:53 pilot3
[2024-05-19 12:19:44] -rw------- 1 boinc boinc 233341992 May 19 12:18 HITS.38776104._007723.pool.root.1
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc       530 May 19 12:19 boinc_task_state.xml
[2024-05-19 12:19:44] -rw------- 1 boinc boinc      1059 May 19 12:19 memory_monitor_summary.json
[2024-05-19 12:19:44] -rw------- 1 boinc boinc        95 May 19 12:19 pilot_heartbeat.json
[2024-05-19 12:19:44] -rw------- 1 boinc boinc    292292 May 19 12:19 log.38776104._007723.job.log.tgz.1
[2024-05-19 12:19:44] -rw------- 1 boinc boinc      7758 May 19 12:19 heartbeat.json
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc      8192 May 19 12:19 boinc_mmap_file
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc        27 May 19 12:19 wrapper_checkpoint.txt
[2024-05-19 12:19:44] -rw------- 1 boinc boinc      4416 May 19 12:19 pilotlog.txt
[2024-05-19 12:19:44] -rw------- 1 boinc boinc    923533 May 19 12:19 log.38776104._007723.job.log.1
[2024-05-19 12:19:44] -rw------- 1 boinc boinc       357 May 19 12:19 output.list
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc       620 May 19 12:19 runtime_log
[2024-05-19 12:19:44] -rw------- 1 boinc boinc   1239040 May 19 12:19 result.tar.gz
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc     11409 May 19 12:19 runtime_log.err
[2024-05-19 12:19:44] -rw------- 1 boinc boinc       654 May 19 12:19 lYLMDmudYR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmOgJKDmRlw3km.diag
[2024-05-19 12:19:44] -rw-r--r-- 1 boinc boinc     21429 May 19 12:19 stderr.txt
[2024-05-19 12:19:44] HITS file was successfully produced:
[2024-05-19 12:19:44] -rw------- 1 boinc boinc 233341992 May 19 12:18 shared/HITS.pool.root.1
[2024-05-19 12:19:44]  *** Contents of shared directory: ***
[2024-05-19 12:19:44] total 967680
[2024-05-19 12:19:44] -rw------- 2 boinc boinc 152961024 May 19 03:46 copy_3mM0H8
[2024-05-19 12:19:44] -rw-r--r-- 2 boinc boinc 602838123 May 19 09:53 ATLAS.root_0
[2024-05-19 12:19:44] -rw-r--r-- 2 boinc boinc     17537 May 19 09:53 start_atlas.sh
[2024-05-19 12:19:44] -rw-r--r-- 2 boinc boinc    479997 May 19 09:53 input.tar.gz
[2024-05-19 12:19:44] -rw------- 1 boinc boinc 233341992 May 19 12:18 HITS.pool.root.1
[2024-05-19 12:19:44] -rw------- 1 boinc boinc   1239040 May 19 12:19 result.tar.gz
12:19:46 (2822513): run_atlas exited; CPU time 31939.872181
12:19:46 (2822513): called boinc_finish(0)

</stderr_txt>
]]>

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