Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:45:54 (4000675): wrapper (7.7.26015): starting
05:45:54 (4000675): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 05:45:54] Arguments: --nthreads 4
[2024-05-18 05:45:54] Threads: 4
[2024-05-18 05:45:54] Checking for CVMFS
[2024-05-18 05:45:54] No cvmfs_config command found, will try listing directly
[2024-05-18 05:45:54] CVMFS is ok
[2024-05-18 05:45:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 05:45:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 05:45:54] Further information can be found at the LHC@home message board.
[2024-05-18 05:45:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 05:45:54] Checking for apptainer binary...
[2024-05-18 05:45:54] which: no apptainer in ((null))
[2024-05-18 05:45:54] apptainer is not installed, using version from CVMFS
[2024-05-18 05:45:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 05:45:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-18 05:45:55] apptainer works
[2024-05-18 05:45:55] Set ATHENA_PROC_NUMBER=4
[2024-05-18 05:45:55] Set ATHENA_CORE_NUMBER=4
[2024-05-18 05:45:55] Starting ATLAS job with PandaID=6206903643
[2024-05-18 05:45:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 07:31:05]  *** The last 200 lines of the pilot log: ***
[2024-05-18 07:31:05] 2024-05-18 05:30:48,616 | INFO     | intersect: -190772492049.00577
[2024-05-18 07:31:05] 2024-05-18 05:30:48,616 | INFO     | chi2: 3.8862913874712106
[2024-05-18 07:31:05] 2024-05-18 05:30:48,616 | INFO     | model: linear, x: [1716003991.0, 1716004052.0, 1716004113.0, 1716004174.0, 1716004235.0, 1716004296.0, 1716004357.0, 1716004418.0, 1716004479.0, 1716004540.0, 1716
[2024-05-18 07:31:05] 2024-05-18 05:30:48,616 | INFO     | sum of square deviations: 291817564.5
[2024-05-18 07:31:05] 2024-05-18 05:30:48,617 | INFO     | sum of deviations: 35582309031.49999
[2024-05-18 07:31:05] 2024-05-18 05:30:48,617 | INFO     | mean x: 1716006949.5
[2024-05-18 07:31:05] 2024-05-18 05:30:48,617 | INFO     | mean y: 2218226.397959184
[2024-05-18 07:31:05] 2024-05-18 05:30:48,617 | INFO     | -- intersect: -209236350678.56116
[2024-05-18 07:31:05] 2024-05-18 05:30:48,617 | INFO     | intersect: -209236350678.56116
[2024-05-18 07:31:05] 2024-05-18 05:30:48,617 | INFO     | chi2: 3.879991502643671
[2024-05-18 07:31:05] 2024-05-18 05:30:48,617 | INFO     | current chi2=3.879991502643671 (change=0.16210531325184077 %)
[2024-05-18 07:31:05] 2024-05-18 05:30:48,617 | INFO     | right removable region: 97
[2024-05-18 07:31:05] 2024-05-18 05:30:48,618 | INFO     | model: linear, x: [1716004296.0, 1716004357.0, 1716004418.0, 1716004479.0, 1716004540.0, 1716004601.0, 1716004662.0, 1716004723.0, 1716004784.0, 1716004845.0, 1716
[2024-05-18 07:31:05] 2024-05-18 05:30:48,618 | INFO     | sum of square deviations: 291817564.5
[2024-05-18 07:31:05] 2024-05-18 05:30:48,618 | INFO     | sum of deviations: 15285876021.499996
[2024-05-18 07:31:05] 2024-05-18 05:30:48,618 | INFO     | mean x: 1716007254.5
[2024-05-18 07:31:05] 2024-05-18 05:30:48,618 | INFO     | mean y: 2297213.724489796
[2024-05-18 07:31:05] 2024-05-18 05:30:48,618 | INFO     | -- intersect: -89884938289.81763
[2024-05-18 07:31:05] 2024-05-18 05:30:48,618 | INFO     | intersect: -89884938289.81763
[2024-05-18 07:31:05] 2024-05-18 05:30:48,619 | INFO     | chi2: 1.4562558655311755
[2024-05-18 07:31:05] 2024-05-18 05:30:48,619 | INFO     | current chi2=1.4562558655311755 (change=62.52839222951954 %)
[2024-05-18 07:31:05] 2024-05-18 05:30:48,619 | INFO     | model: linear, x: [1716004601.0, 1716004662.0, 1716004723.0, 1716004784.0, 1716004845.0, 1716004906.0, 1716004967.0, 1716005028.0, 1716005089.0, 1716005150.0, 1716
[2024-05-18 07:31:05] 2024-05-18 05:30:48,619 | INFO     | sum of square deviations: 249388862.0
[2024-05-18 07:31:05] 2024-05-18 05:30:48,619 | INFO     | sum of deviations: -2275444631.0000005
[2024-05-18 07:31:05] 2024-05-18 05:30:48,619 | INFO     | mean x: 1716007407.0
[2024-05-18 07:31:05] 2024-05-18 05:30:48,619 | INFO     | mean y: 2360375.2580645164
[2024-05-18 07:31:05] 2024-05-18 05:30:48,619 | INFO     | -- intersect: 15659354074.577253
[2024-05-18 07:31:05] 2024-05-18 05:30:48,620 | INFO     | intersect: 15659354074.577253
[2024-05-18 07:31:05] 2024-05-18 05:30:48,620 | INFO     | chi2: 0.05519687215339164
[2024-05-18 07:31:05] 2024-05-18 05:30:48,620 | INFO     | current chi2=0.05519687215339164 (change=96.20967211464188 %)
[2024-05-18 07:31:05] 2024-05-18 05:30:48,620 | INFO     | model: linear, x: [1716004906.0, 1716004967.0, 1716005028.0, 1716005089.0, 1716005150.0, 1716005211.0, 1716005272.0, 1716005333.0, 1716005394.0, 1716005455.0, 1716
[2024-05-18 07:31:05] 2024-05-18 05:30:48,620 | INFO     | sum of square deviations: 211285822.0
[2024-05-18 07:31:05] 2024-05-18 05:30:48,620 | INFO     | sum of deviations: -3035048290.0000005
[2024-05-18 07:31:05] 2024-05-18 05:30:48,620 | INFO     | mean x: 1716007559.5
[2024-05-18 07:31:05] 2024-05-18 05:30:48,621 | INFO     | mean y: 2363165.3863636362
[2024-05-18 07:31:05] 2024-05-18 05:30:48,621 | INFO     | -- intersect: 24652222582.302418
[2024-05-18 07:31:05] 2024-05-18 05:30:48,621 | INFO     | intersect: 24652222582.302418
[2024-05-18 07:31:05] 2024-05-18 05:30:48,621 | INFO     | chi2: 0.024770773614691904
[2024-05-18 07:31:05] 2024-05-18 05:30:48,621 | INFO     | current chi2=0.024770773614691904 (change=55.12286720549285 %)
[2024-05-18 07:31:05] 2024-05-18 05:30:48,621 | INFO     | model: linear, x: [1716005211.0, 1716005272.0, 1716005333.0, 1716005394.0, 1716005455.0, 1716005516.0, 1716005577.0, 1716005638.0, 1716005699.0, 1716005760.0, 1716
[2024-05-18 07:31:05] 2024-05-18 05:30:48,621 | INFO     | sum of square deviations: 177275882.0
[2024-05-18 07:31:05] 2024-05-18 05:30:48,622 | INFO     | sum of deviations: -1582105272.0000002
[2024-05-18 07:31:05] 2024-05-18 05:30:48,622 | INFO     | mean x: 1716007712.0
[2024-05-18 07:31:05] 2024-05-18 05:30:48,622 | INFO     | mean y: 2356631.7590361447
[2024-05-18 07:31:05] 2024-05-18 05:30:48,622 | INFO     | -- intersect: 15316931955.365992
[2024-05-18 07:31:05] 2024-05-18 05:30:48,622 | INFO     | intersect: 15316931955.365992
[2024-05-18 07:31:05] 2024-05-18 05:30:48,622 | INFO     | chi2: 0.019136933941095863
[2024-05-18 07:31:05] 2024-05-18 05:30:48,622 | INFO     | current chi2=0.019136933941095863 (change=22.74389876242916 %)
[2024-05-18 07:31:05] 2024-05-18 05:30:48,622 | INFO     | left removable region: 40
[2024-05-18 07:31:05] 2024-05-18 05:30:48,622 | INFO     | model: linear, x: [1716006431.0, 1716006492.0, 1716006553.0, 1716006614.0, 1716006675.0, 1716006736.0, 1716006797.0, 1716006858.0, 1716006919.0, 1716006980.0, 1716
[2024-05-18 07:31:05] 2024-05-18 05:30:48,622 | INFO     | sum of square deviations: 57407588.0
[2024-05-18 07:31:05] 2024-05-18 05:30:48,623 | INFO     | sum of deviations: 223907149.0
[2024-05-18 07:31:05] 2024-05-18 05:30:48,623 | INFO     | mean x: 1716008139.0
[2024-05-18 07:31:05] 2024-05-18 05:30:48,623 | INFO     | mean y: 2345904.0701754387
[2024-05-18 07:31:05] 2024-05-18 05:30:48,623 | INFO     | -- intersect: -6690610610.045794
[2024-05-18 07:31:05] 2024-05-18 05:30:48,623 | INFO     | intersect: -6690610610.045794
[2024-05-18 07:31:05] 2024-05-18 05:30:48,623 | INFO     | chi2: 4.847808869141774e-05
[2024-05-18 07:31:05] 2024-05-18 05:30:48,623 | INFO     | -- intersect: -6690610610.045794
[2024-05-18 07:31:05] 2024-05-18 05:30:48,623 | INFO     | current memory leak: 3.90 B/s (using 57 data points, chi2=0.00)
[2024-05-18 07:31:05] 2024-05-18 05:30:48,624 | INFO     | ..............................
[2024-05-18 07:31:05] 2024-05-18 05:30:48,624 | INFO     | . Timing measurements:
[2024-05-18 07:31:05] 2024-05-18 05:30:48,624 | INFO     | . get job = 0 s
[2024-05-18 07:31:05] 2024-05-18 05:30:48,624 | INFO     | . initial setup = 1 s
[2024-05-18 07:31:05] 2024-05-18 05:30:48,624 | INFO     | . payload setup = 5 s
[2024-05-18 07:31:05] 2024-05-18 05:30:48,624 | INFO     | . stage-in = 0 s
[2024-05-18 07:31:05] 2024-05-18 05:30:48,624 | INFO     | . payload execution = 6253 s
[2024-05-18 07:31:05] 2024-05-18 05:30:48,624 | INFO     | . stage-out = 0 s
[2024-05-18 07:31:05] 2024-05-18 05:30:48,624 | INFO     | . log creation = 0 s
[2024-05-18 07:31:05] 2024-05-18 05:30:48,624 | INFO     | ..............................
[2024-05-18 07:31:05] 2024-05-18 05:30:48,704 | INFO     | 
[2024-05-18 07:31:05] 2024-05-18 05:30:48,704 | INFO     | job summary report
[2024-05-18 07:31:05] 2024-05-18 05:30:48,704 | INFO     | --------------------------------------------------
[2024-05-18 07:31:05] 2024-05-18 05:30:48,704 | INFO     | PanDA job id: 6206903643
[2024-05-18 07:31:05] 2024-05-18 05:30:48,704 | INFO     | task id: 38776104
[2024-05-18 07:31:05] 2024-05-18 05:30:48,705 | INFO     | errors: (none)
[2024-05-18 07:31:05] 2024-05-18 05:30:48,705 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 07:31:05] 2024-05-18 05:30:48,705 | INFO     | pilot state: finished 
[2024-05-18 07:31:05] 2024-05-18 05:30:48,705 | INFO     | transexitcode: 0
[2024-05-18 07:31:05] 2024-05-18 05:30:48,705 | INFO     | exeerrorcode: 0
[2024-05-18 07:31:05] 2024-05-18 05:30:48,705 | INFO     | exeerrordiag: 
[2024-05-18 07:31:05] 2024-05-18 05:30:48,705 | INFO     | exitcode: 0
[2024-05-18 07:31:05] 2024-05-18 05:30:48,705 | INFO     | exitmsg: OK
[2024-05-18 07:31:05] 2024-05-18 05:30:48,705 | INFO     | cpuconsumptiontime: 22372 s
[2024-05-18 07:31:05] 2024-05-18 05:30:48,705 | INFO     | nevents: 400
[2024-05-18 07:31:05] 2024-05-18 05:30:48,705 | INFO     | neventsw: 0
[2024-05-18 07:31:05] 2024-05-18 05:30:48,705 | INFO     | pid: 4013569
[2024-05-18 07:31:05] 2024-05-18 05:30:48,706 | INFO     | pgrp: 4013569
[2024-05-18 07:31:05] 2024-05-18 05:30:48,706 | INFO     | corecount: 4
[2024-05-18 07:31:05] 2024-05-18 05:30:48,706 | INFO     | event service: False
[2024-05-18 07:31:05] 2024-05-18 05:30:48,706 | INFO     | sizes: {0: 2392211, 4: 2392417, 11: 2392445, 6263: 2419430, 6264: 2428470, 6269: 2428584}
[2024-05-18 07:31:05] 2024-05-18 05:30:48,706 | INFO     | --------------------------------------------------
[2024-05-18 07:31:05] 2024-05-18 05:30:48,706 | INFO     | 
[2024-05-18 07:31:05] 2024-05-18 05:30:48,706 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/1
[2024-05-18 07:31:05] 2024-05-18 05:30:48,727 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,727 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,727 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,727 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,728 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,728 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,728 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,729 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 07:31:05] 2024-05-18 05:30:48,729 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,729 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 07:31:05] 2024-05-18 05:30:48,729 | INFO     | job 6206903643 has completed (purged errors)
[2024-05-18 07:31:05] 2024-05-18 05:30:48,729 | INFO     | overall cleanup function is called
[2024-05-18 07:31:05] 2024-05-18 05:30:49,737 | INFO     | --- collectZombieJob: --- 10, [4013569]
[2024-05-18 07:31:05] 2024-05-18 05:30:49,737 | INFO     | zombie collector waiting for pid 4013569
[2024-05-18 07:31:05] 2024-05-18 05:30:49,737 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 07:31:05] 2024-05-18 05:30:50,743 | INFO     | collected zombie processes
[2024-05-18 07:31:05] 2024-05-18 05:30:50,743 | INFO     | will now attempt to kill all subprocesses of pid=4013569
[2024-05-18 07:31:05] 2024-05-18 05:30:50,960 | INFO     | process IDs to be killed: [4013569] (in reverse order)
[2024-05-18 07:31:05] 2024-05-18 05:30:51,125 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 07:31:05] 2024-05-18 05:30:51,126 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 07:31:05] 2024-05-18 05:30:51,145 | INFO     | did not find any defunct processes belonging to 4013569
[2024-05-18 07:31:05] 2024-05-18 05:30:51,161 | INFO     | did not find any defunct processes belonging to 4013569
[2024-05-18 07:31:05] 2024-05-18 05:30:51,162 | INFO     | ready for new job
[2024-05-18 07:31:05] 2024-05-18 05:30:51,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 07:31:05] 2024-05-18 05:30:51,163 | INFO     | *************************************
[2024-05-18 07:31:05] 2024-05-18 05:30:51,163 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 07:31:05] 2024-05-18 05:30:51,164 | INFO     | *************************************
[2024-05-18 07:31:05] 2024-05-18 05:30:51,164 | INFO     | 
[2024-05-18 07:31:05] 2024-05-18 05:30:51,173 | INFO     | architecture information:
[2024-05-18 07:31:05] 2024-05-18 05:30:51,173 | INFO     | executing command: cat /etc/os-release
[2024-05-18 07:31:05] 2024-05-18 05:30:51,187 | INFO     | cat /etc/os-release:
[2024-05-18 07:31:05] NAME="CentOS Linux"
[2024-05-18 07:31:05] VERSION="7 (Core)"
[2024-05-18 07:31:05] ID="centos"
[2024-05-18 07:31:05] ID_LIKE="rhel fedora"
[2024-05-18 07:31:05] VERSION_ID="7"
[2024-05-18 07:31:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 07:31:05] ANSI_COLOR="0;31"
[2024-05-18 07:31:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 07:31:05] HOME_URL="https://www.centos.org/"
[2024-05-18 07:31:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 07:31:05] 
[2024-05-18 07:31:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 07:31:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 07:31:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 07:31:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 07:31:05] 
[2024-05-18 07:31:05] 2024-05-18 05:30:51,188 | INFO     | *************************************
[2024-05-18 07:31:05] 2024-05-18 05:30:51,690 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/1
[2024-05-18 07:31:05] 2024-05-18 05:30:51,705 | INFO     | sufficient remaining disk space (2984195915776 B)
[2024-05-18 07:31:05] 2024-05-18 05:30:51,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 07:31:05] 2024-05-18 05:30:51,705 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 07:31:05] 2024-05-18 05:30:51,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 07:31:05] 2024-05-18 05:30:51,706 | INFO     | aborting loop
[2024-05-18 07:31:05] 2024-05-18 05:30:51,706 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 07:31:05] 2024-05-18 05:30:51,707 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 07:31:05] 2024-05-18 05:30:51,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 07:31:05] 2024-05-18 05:30:51,707 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 07:31:05] 2024-05-18 05:30:52,192 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 07:31:05] 2024-05-18 05:30:52,276 | INFO     | all job control threads have been joined
[2024-05-18 07:31:05] 2024-05-18 05:30:52,591 | INFO     | all payload control threads have been joined
[2024-05-18 07:31:05] 2024-05-18 05:30:52,592 | INFO     | all data control threads have been joined
[2024-05-18 07:31:05] 2024-05-18 05:30:52,711 | INFO     | [job] retrieve thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:52,712 | INFO     | [job] job monitor thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:52,754 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:52,933 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:53,282 | INFO     | [job] control thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:53,571 | INFO     | [payload] failed_post thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:53,597 | INFO     | [payload] control thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:53,598 | INFO     | [data] control thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:53,715 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 07:31:05] 2024-05-18 05:30:53,717 | INFO     | [data] copytool_in thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:53,766 | INFO     | [job] validate thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:53,848 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:53,873 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:54,165 | INFO     | [payload] validate_post thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:54,198 | INFO     | [data] copytool_out thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:54,720 | INFO     | [job] queue monitor thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:54,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 07:31:05] 2024-05-18 05:30:59,005 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 07:31:05] 2024-05-18 05:30:59,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47161694512192)>', '<ExcThread(monitor, started 47161865762560)>']
[2024-05-18 07:31:05] 2024-05-18 05:30:59,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 07:31:05] 2024-05-18 05:30:59,748 | INFO     | [monitor] control thread has ended
[2024-05-18 07:31:05] 2024-05-18 05:31:04,541 | INFO     | all workflow threads have been joined
[2024-05-18 07:31:05] 2024-05-18 05:31:04,541 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 07:31:05] 2024-05-18 05:31:04,541 | INFO     | traces error code: 0
[2024-05-18 07:31:05] 2024-05-18 05:31:04,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 07:31:05] 2024-05-18 05:31:04,621 [wrapper] ==== pilot stdout END ====
[2024-05-18 07:31:05] 2024-05-18 05:31:04,623 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 07:31:05] 2024-05-18 05:31:04,626 [wrapper] pilotpid: 4005497
[2024-05-18 07:31:05] 2024-05-18 05:31:04,628 [wrapper] Pilot exit status: 0
[2024-05-18 07:31:05] 2024-05-18 05:31:04,637 [wrapper] pandaids: 6206903643
[2024-05-18 07:31:05] 2024-05-18 05:31:04,760 [wrapper] cleanup: SIGTERM to supervisor_pilot  137598 4005498
[2024-05-18 07:31:05] 2024-05-18 05:31:04,762 [wrapper] Test setup, not cleaning
[2024-05-18 07:31:05] 2024-05-18 05:31:04,764 [wrapper] ==== wrapper stdout END ====
[2024-05-18 07:31:05] 2024-05-18 05:31:04,767 [wrapper] ==== wrapper stderr END ====
[2024-05-18 07:31:05] 2024-05-18 05:31:04,771 [wrapper] apfmon messages muted
[2024-05-18 07:31:05]  *** Error codes and diagnostics ***
[2024-05-18 07:31:05]     "exeErrorCode": 0,
[2024-05-18 07:31:05]     "exeErrorDiag": "",
[2024-05-18 07:31:05]     "pilotErrorCode": 0,
[2024-05-18 07:31:05]     "pilotErrorDiag": "",
[2024-05-18 07:31:05]  *** Listing of results directory ***
[2024-05-18 07:31:05] total 826084
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc      5633 May 15 20:16 queuedata.json
[2024-05-18 07:31:05] -rwx------ 1 boinc boinc     32251 May 15 20:18 runpilot2-wrapper.sh
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc    467845 May 15 20:18 pilot3.tar.gz
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc       100 May 18 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 07:31:05] -rwxr-xr-x 1 boinc boinc      7986 May 18 05:45 run_atlas
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc       105 May 18 05:45 job.xml
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc      6646 May 18 05:45 init_data.xml
[2024-05-18 07:31:05] -rw-r--r-- 2 boinc boinc 605265718 May 18 05:45 EVNT.38776100._000268.pool.root.1
[2024-05-18 07:31:05] -rw-r--r-- 2 boinc boinc     17537 May 18 05:45 start_atlas.sh
[2024-05-18 07:31:05] drwxrwx--x 2 boinc boinc      4096 May 18 05:45 shared
[2024-05-18 07:31:05] -rw-r--r-- 2 boinc boinc    479996 May 18 05:45 input.tar.gz
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc         0 May 18 05:45 boinc_lockfile
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc      2639 May 18 05:45 pandaJob.out
[2024-05-18 07:31:05] -rw------- 1 boinc boinc       424 May 18 05:45 setup.sh.local
[2024-05-18 07:31:05] -rw------- 1 boinc boinc   1019073 May 18 05:46 agis_schedconf.cvmfs.json
[2024-05-18 07:31:05] -rw------- 1 boinc boinc         0 May 18 05:46 agis_ddmendpoints.agis.ALL.json
[2024-05-18 07:31:05] -rw------- 1 boinc boinc   1324701 May 18 05:46 cric_ddmendpoints.json
[2024-05-18 07:31:05] drwx------ 4 boinc boinc      4096 May 18 05:46 pilot3
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc       530 May 18 07:30 boinc_task_state.xml
[2024-05-18 07:31:05] -rw------- 1 boinc boinc 235322645 May 18 07:30 HITS.38776104._007580.pool.root.1
[2024-05-18 07:31:05] -rw------- 1 boinc boinc        95 May 18 07:30 pilot_heartbeat.json
[2024-05-18 07:31:05] -rw------- 1 boinc boinc      1040 May 18 07:30 memory_monitor_summary.json
[2024-05-18 07:31:05] -rw------- 1 boinc boinc    245500 May 18 07:30 log.38776104._007580.job.log.tgz.1
[2024-05-18 07:31:05] -rw------- 1 boinc boinc      7719 May 18 07:30 heartbeat.json
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc        27 May 18 07:30 wrapper_checkpoint.txt
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc      8192 May 18 07:30 boinc_mmap_file
[2024-05-18 07:31:05] -rw------- 1 boinc boinc      4346 May 18 07:31 pilotlog.txt
[2024-05-18 07:31:05] -rw------- 1 boinc boinc    651293 May 18 07:31 log.38776104._007580.job.log.1
[2024-05-18 07:31:05] -rw------- 1 boinc boinc       357 May 18 07:31 output.list
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc       620 May 18 07:31 runtime_log
[2024-05-18 07:31:05] -rw------- 1 boinc boinc    911360 May 18 07:31 result.tar.gz
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc     11428 May 18 07:31 runtime_log.err
[2024-05-18 07:31:05] -rw------- 1 boinc boinc       655 May 18 07:31 3yqLDmCOYR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmEfJKDmcTgUXn.diag
[2024-05-18 07:31:05] -rw-r--r-- 1 boinc boinc     21338 May 18 07:31 stderr.txt
[2024-05-18 07:31:05] HITS file was successfully produced:
[2024-05-18 07:31:05] -rw------- 1 boinc boinc 235322645 May 18 07:30 shared/HITS.pool.root.1
[2024-05-18 07:31:05]  *** Contents of shared directory: ***
[2024-05-18 07:31:05] total 822280
[2024-05-18 07:31:05] -rw-r--r-- 2 boinc boinc 605265718 May 18 05:45 ATLAS.root_0
[2024-05-18 07:31:05] -rw-r--r-- 2 boinc boinc     17537 May 18 05:45 start_atlas.sh
[2024-05-18 07:31:05] -rw-r--r-- 2 boinc boinc    479996 May 18 05:45 input.tar.gz
[2024-05-18 07:31:05] -rw------- 1 boinc boinc 235322645 May 18 07:30 HITS.pool.root.1
[2024-05-18 07:31:05] -rw------- 1 boinc boinc    911360 May 18 07:31 result.tar.gz
07:31:07 (4000675): run_atlas exited; CPU time 22235.373620
07:31:07 (4000675): called boinc_finish(0)

</stderr_txt>
]]>

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