Stderr output

<core_client_version>8.0.0</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-16 14:06:48 (9508): Detected: vboxwrapper 26206
2024-05-16 14:06:48 (9508): Detected: BOINC client v8.0.0
2024-05-16 14:06:48 (9508): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-05-16 14:06:49 (9508): Successfully copied 'init_data.xml' to the shared directory.
2024-05-16 14:06:49 (9508): Create VM. (boinc_ae29bf1d35214274, slot#45)
2024-05-16 14:06:50 (9508): Setting Memory Size for VM. (4400MB)
2024-05-16 14:06:50 (9508): Setting CPU Count for VM. (4)
2024-05-16 14:06:50 (9508): Setting Chipset Options for VM.
2024-05-16 14:06:51 (9508): Setting Graphics Controller Options for VM.
2024-05-16 14:06:51 (9508): Setting Boot Options for VM.
2024-05-16 14:06:51 (9508): Setting Network Configuration for NAT.
2024-05-16 14:06:51 (9508): Enabling VM Network Access.
2024-05-16 14:06:52 (9508): Disabling USB Support for VM.
2024-05-16 14:06:52 (9508): Disabling COM Port Support for VM.
2024-05-16 14:06:52 (9508): Disabling LPT Port Support for VM.
2024-05-16 14:06:53 (9508): Disabling Audio Support for VM.
2024-05-16 14:06:53 (9508): Disabling Clipboard Support for VM.
2024-05-16 14:06:53 (9508): Disabling Drag and Drop Support for VM.
2024-05-16 14:06:54 (9508): Adding storage controller(s) to VM.
2024-05-16 14:06:54 (9508): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-16 14:06:55 (9508): Adding VirtualBox Guest Additions to VM.
2024-05-16 14:06:55 (9508): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-16 14:06:55 (9508): forwarding host port 59079 to guest port 80
2024-05-16 14:06:56 (9508): Enabling remote desktop for VM.
2024-05-16 14:06:56 (9508): Enabling shared directory for VM.
2024-05-16 14:06:57 (9508): Starting VM using VBoxManage interface. (boinc_ae29bf1d35214274, slot#45)
2024-05-16 14:07:04 (9508): Successfully started VM. (PID = '30420')
2024-05-16 14:07:04 (9508): Reporting VM Process ID to BOINC.
2024-05-16 14:07:04 (9508): Guest Log: BIOS: VirtualBox 7.0.18
2024-05-16 14:07:04 (9508): Guest Log: CPUID EDX: 0x178bfbff
2024-05-16 14:07:04 (9508): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-16 14:07:04 (9508): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-16 14:07:04 (9508): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-16 14:07:04 (9508): Detected: Web Application Enabled (http://localhost:59079)
2024-05-16 14:07:04 (9508): Detected: Remote Desktop Enabled (localhost:59080)
2024-05-16 14:07:04 (9508): Preference change detected
2024-05-16 14:07:04 (9508): Setting CPU throttle for VM. (100%)
2024-05-16 14:07:05 (9508): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-16 14:07:06 (9508): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-16 14:07:06 (9508): Guest Log: BIOS: Booting from Hard Disk...
2024-05-16 14:07:09 (9508): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-16 14:07:09 (9508): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-16 14:07:09 (9508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-16 14:07:18 (9508): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-16 14:07:18 (9508): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-16 14:07:34 (9508): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-16 14:07:34 (9508): Guest Log: 00:00:00.000567 main     Log opened 2024-05-16T14:07:32.622284000Z
2024-05-16 14:07:34 (9508): Guest Log: 00:00:00.000793 main     OS Product: Linux
2024-05-16 14:07:34 (9508): Guest Log: 00:00:00.000843 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-16 14:07:34 (9508): Guest Log: 00:00:00.000895 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-16 14:07:34 (9508): Guest Log: 00:00:00.000936 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-16 14:07:34 (9508): Guest Log: 00:00:00.000936 main     Process ID: 1303
2024-05-16 14:07:34 (9508): Guest Log: 00:00:00.000936 main     Package type: LINUX_64BITS_GENERIC
2024-05-16 14:07:34 (9508): Guest Log: 00:00:00.010732 main     5.2.32 r132073 started. Verbose level = 0
2024-05-16 14:07:35 (9508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-16 14:07:35 (9508): Guest Log: [INFO] Mounting shared directory
2024-05-16 14:07:35 (9508): Guest Log: [INFO] Checking for init_data.xml
2024-05-16 14:07:40 (9508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-16 14:07:40 (9508): Guest Log: [INFO] Detected branch: prod
2024-05-16 14:07:41 (9508): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-16 14:07:41 (9508): Guest Log: Copying input files
2024-05-16 14:07:44 (9508): Guest Log: 00:00:10.013459 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 242 023 000ns (GuestNow=1 715 857 664 393 084 000 ns GuestLast=1 715 868 452 635 107 000 ns fSetTimeLastLoop=true )
2024-05-16 14:07:47 (9508): Guest Log: Copied input files into RunAtlas.
2024-05-16 14:07:47 (9508): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-16 14:07:47 (9508): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-16 14:07:47 (9508): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-16 14:07:47 (9508): Guest Log: Further information can be found at the LHC@home message board.
2024-05-16 14:07:55 (9508): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-16 14:07:55 (9508): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-16 14:07:55 (9508): Guest Log: 2.6.3.0 1580 0 30180 132796 4 1 3116989 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2024-05-16 14:07:56 (9508): Guest Log: copied the webapp to /var/www
2024-05-16 14:07:56 (9508): Guest Log: ATHENA_PROC_NUMBER=4
2024-05-16 14:07:56 (9508): Guest Log: ATHENA_CORE_NUMBER=4
2024-05-16 14:07:57 (9508): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-16 14:07:57 (9508): Guest Log:  *** Starting ATLAS job. (PandaID=6206903570 taskID=38776104) ***
2024-05-16 15:47:07 (9508): Status Report: Elapsed Time: '6000.000000'
2024-05-16 15:47:07 (9508): Status Report: CPU Time: '17639.187500'
2024-05-16 16:00:03 (9508): VM state change detected. (old = 'running', new = 'paused')
2024-05-16 19:00:04 (9508): VM state change detected. (old = 'paused', new = 'running')
2024-05-16 19:00:13 (9508): Guest Log: 01:52:34.982146 timesync vgsvcTimeSyncWorker: Radical host time change: 10 809 659 000 000ns (HostNow=1 715 875 176 780 000 000 ns HostLast=1 715 864 367 121 000 000 ns)
2024-05-16 19:00:23 (9508): Guest Log: 01:52:44.983323 timesync vgsvcTimeSyncWorker: Radical guest time change: 10 777 420 008 000ns (GuestNow=1 715 875 186 781 307 000 ns GuestLast=1 715 864 409 361 299 000 ns fSetTimeLastLoop=true )
2024-05-16 20:27:11 (9508): Status Report: Elapsed Time: '12000.000000'
2024-05-16 20:27:11 (9508): Status Report: CPU Time: '39662.390625'
2024-05-16 20:43:19 (9508): Guest Log:  *** Job finished ***
2024-05-16 20:43:19 (9508): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:31,282 | INFO     | [data] queue_monitor thread has finished
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:35,107 | INFO     | job.realtimelogging is not enabled
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:36,176 | INFO     | [payload] run_realtimelog thread has finished
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:37,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139649538881344)>', '<ExcThread(monitor, started 139648974186240)>']
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:37,542 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:37,543 | INFO     | [monitor] control thread has ended
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:42,527 | INFO     | all workflow threads have been joined
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:42,528 | INFO     | end of generic workflow (traces error code: 0)
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:42,528 | INFO     | traces error code: 0
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:42,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:42,731 [wrapper] ==== pilot stdout END ====
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:42,739 [wrapper] ==== wrapper stdout RESUME ====
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:42,749 [wrapper] pilotpid: 6463
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:42,759 [wrapper] Pilot exit status: 0
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:42,934 [wrapper] pandaids: 6206903570
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:43,011 [wrapper] cleanup: SIGTERM to supervisor_pilot 14506 6464
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:43,021 [wrapper] Test setup, not cleaning
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:43,028 [wrapper] ==== wrapper stdout END ====
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:43,038 [wrapper] ==== wrapper stderr END ====
2024-05-16 20:43:19 (9508): Guest Log: 2024-05-16 17:42:43,057 [wrapper] apfmon messages muted
2024-05-16 20:43:19 (9508): Guest Log:  *** Error codes and diagnostics ***
2024-05-16 20:43:20 (9508): Guest Log:     "exeErrorCode": 0,
2024-05-16 20:43:20 (9508): Guest Log:     "exeErrorDiag": "",
2024-05-16 20:43:20 (9508): Guest Log:     "pilotErrorCode": 0,
2024-05-16 20:43:20 (9508): Guest Log:     "pilotErrorDiag": "",
2024-05-16 20:43:20 (9508): Guest Log:  *** Listing of results directory ***
2024-05-16 20:43:20 (9508): Guest Log: total 239060
2024-05-16 20:43:20 (9508): Guest Log: -rw-r--r--. 1 atlas atlas    467845 May 15 18:08 pilot3.tar.gz
2024-05-16 20:43:20 (9508): Guest Log: -rwx------. 1 atlas atlas     32251 May 15 18:13 runpilot2-wrapper.sh
2024-05-16 20:43:20 (9508): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 15 18:13 queuedata.json
2024-05-16 20:43:20 (9508): Guest Log: -rwxr-xr-x. 1 atlas atlas      9186 May 16 11:07 init_data.xml
2024-05-16 20:43:20 (9508): Guest Log: -rwxr-xr-x. 1 atlas atlas    480002 May 16 11:07 input.tar.gz
2024-05-16 20:43:20 (9508): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 May 16 11:07 start_atlas.sh
2024-05-16 20:43:20 (9508): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 16 11:07 EVNT.38776100._000305.pool.root.1 -> /data/./ATLAS.root_0
2024-05-16 20:43:20 (9508): Guest Log: -rw-r--r--. 1 atlas atlas      2641 May 16 11:07 pandaJob.out
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas       424 May 16 11:08 setup.sh.local
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas   1010327 May 16 11:09 agis_schedconf.cvmfs.json
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas   1324701 May 16 11:09 cric_ddmendpoints.json
2024-05-16 20:43:20 (9508): Guest Log: drwx------. 4 atlas atlas      4096 May 16 11:09 pilot3
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas 238394534 May 16 17:41 HITS.38776104._007508.pool.root.1
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas        98 May 16 17:42 pilot_heartbeat.json
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas      1035 May 16 17:42 memory_monitor_summary.json
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas         0 May 16 17:42 agis_ddmendpoints.agis.ALL.json
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas    306924 May 16 17:42 log.38776104._007508.job.log.tgz.1
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas      7736 May 16 17:42 heartbeat.json
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas      4529 May 16 17:42 pilotlog.txt
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas   1169014 May 16 17:42 log.38776104._007508.job.log.1
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas       357 May 16 17:42 output.list
2024-05-16 20:43:20 (9508): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 16 17:42 runtime_log
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas   1495040 May 16 17:42 result.tar.gz
2024-05-16 20:43:20 (9508): Guest Log: -rw-r--r--. 1 atlas atlas     10910 May 16 17:42 runtime_log.err
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas       640 May 16 17:42 retLDmsIYR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmHeOKDm2DhCqm.diag
2024-05-16 20:43:20 (9508): Guest Log: Looking for outputfile HITS.38776104._007508.pool.root.1
2024-05-16 20:43:20 (9508): Guest Log: HITS file was successfully produced
2024-05-16 20:43:20 (9508): Guest Log: -rw-------. 1 atlas atlas 238394534 May 16 17:41 /home/atlas/RunAtlas/HITS.38776104._007508.pool.root.1
2024-05-16 20:43:21 (9508): Guest Log: Successfully finished the ATLAS job!
2024-05-16 20:43:21 (9508): Guest Log: Copying the results back to the shared directory!
2024-05-16 20:43:22 (9508): Guest Log:  *** Contents of shared directory: ***
2024-05-16 20:43:22 (9508): Guest Log: total 822404
2024-05-16 20:43:22 (9508): Guest Log: -rwxrwxrwx. 1 root root 601734619 May 16 11:06 ATLAS.root_0
2024-05-16 20:43:22 (9508): Guest Log: -rwxrwxrwx. 1 root root 238394534 May 16  2024 HITS.pool.root.1
2024-05-16 20:43:22 (9508): Guest Log: -rwxrwxrwx. 1 root root      9186 May 16 11:06 init_data.xml
2024-05-16 20:43:22 (9508): Guest Log: -rwxrwxrwx. 1 root root    480002 May 15 22:09 input.tar.gz
2024-05-16 20:43:22 (9508): Guest Log: -rwxrwxrwx. 1 root root   1495040 May 16  2024 result.tar.gz
2024-05-16 20:43:22 (9508): Guest Log: -rwxrwxrwx. 1 root root     17537 May 15 22:09 start_atlas.sh
2024-05-16 20:43:22 (9508): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-16 20:43:22 (9508): VM Completion File Detected.
2024-05-16 20:43:22 (9508): Powering off VM.
2024-05-16 20:43:23 (9508): Successfully stopped VM.
2024-05-16 20:43:23 (9508): Deregistering VM. (boinc_ae29bf1d35214274, slot#45)
2024-05-16 20:43:24 (9508): Removing network bandwidth throttle group from VM.
2024-05-16 20:43:24 (9508): Removing VM from VirtualBox.
20:43:29 (9508): called boinc_finish(0)

</stderr_txt>
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