Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
06:59:38 (262189): wrapper (7.7.26015): starting
06:59:38 (262189): wrapper: running run_atlas (--nthreads 12)
[2024-05-16 06:59:38] Arguments: --nthreads 12
[2024-05-16 06:59:38] Threads: 12
[2024-05-16 06:59:38] Checking for CVMFS
[2024-05-16 06:59:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 06:59:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 06:59:39] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 06:59:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 06:59:39] 2.9.2.0 179502 182127 180692 132800 0 427 29609001 45568001 24576 130560 0 1228356711 99.804 694399992 18588 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-16 06:59:39] CVMFS is ok
[2024-05-16 06:59:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 06:59:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 06:59:39] Further information can be found at the LHC@home message board.
[2024-05-16 06:59:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 06:59:39] Checking for apptainer binary...
[2024-05-16 06:59:39] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 06:59:39] Running /usr/bin/apptainer --version
[2024-05-16 06:59:39] apptainer version 1.1.8-1.el7
[2024-05-16 06:59:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 06:59:41] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0169.triumf.lcg
[2024-05-16 06:59:41] apptainer works
[2024-05-16 06:59:41] Set ATHENA_PROC_NUMBER=12
[2024-05-16 06:59:41] Set ATHENA_CORE_NUMBER=12
[2024-05-16 06:59:41] Starting ATLAS job with PandaID=6206903524
[2024-05-16 06:59:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 09:33:19]  *** The last 200 lines of the pilot log: ***
[2024-05-16 09:33:19] 2024-05-16 16:33:01,924 | INFO     | intersect: -173187522354.10748
[2024-05-16 09:33:19] 2024-05-16 16:33:01,924 | INFO     | chi2: 5.99112923074246
[2024-05-16 09:33:19] 2024-05-16 16:33:01,924 | INFO     | model: linear, x: [1715868321.0, 1715868382.0, 1715868443.0, 1715868504.0, 1715868565.0, 1715868626.0, 1715868687.0, 1715868748.0, 1715868809.0, 1715868870.0, 1715
[2024-05-16 09:33:19] 2024-05-16 16:33:01,924 | INFO     | sum of square deviations: 850963950.25
[2024-05-16 09:33:19] 2024-05-16 16:33:01,925 | INFO     | sum of deviations: 101912829015.99992
[2024-05-16 09:33:19] 2024-05-16 16:33:01,925 | INFO     | mean x: 1715872561.25
[2024-05-16 09:33:19] 2024-05-16 16:33:01,925 | INFO     | mean y: 2548526.8285714285
[2024-05-16 09:33:19] 2024-05-16 16:33:01,925 | INFO     | -- intersect: -205493144794.3082
[2024-05-16 09:33:19] 2024-05-16 16:33:01,925 | INFO     | intersect: -205493144794.3082
[2024-05-16 09:33:19] 2024-05-16 16:33:01,925 | INFO     | chi2: 5.170868691384806
[2024-05-16 09:33:19] 2024-05-16 16:33:01,925 | INFO     | current chi2=5.170868691384806 (change=13.69125097733874 %)
[2024-05-16 09:33:19] 2024-05-16 16:33:01,925 | INFO     | right removable region: 139
[2024-05-16 09:33:19] 2024-05-16 16:33:01,925 | INFO     | model: linear, x: [1715868626.0, 1715868687.0, 1715868748.0, 1715868809.0, 1715868870.0, 1715868931.0, 1715868992.0, 1715869053.0, 1715869114.0, 1715869175.0, 1715
[2024-05-16 09:33:19] 2024-05-16 16:33:01,925 | INFO     | sum of square deviations: 850939872.571431
[2024-05-16 09:33:19] 2024-05-16 16:33:01,926 | INFO     | sum of deviations: 55214161371.57145
[2024-05-16 09:33:19] 2024-05-16 16:33:01,926 | INFO     | mean x: 1715872866.2857144
[2024-05-16 09:33:19] 2024-05-16 16:33:01,926 | INFO     | mean y: 2603209.535714286
[2024-05-16 09:33:19] 2024-05-16 16:33:01,926 | INFO     | -- intersect: -111333678455.00388
[2024-05-16 09:33:19] 2024-05-16 16:33:01,926 | INFO     | intersect: -111333678455.00388
[2024-05-16 09:33:19] 2024-05-16 16:33:01,926 | INFO     | chi2: 3.212784234351105
[2024-05-16 09:33:19] 2024-05-16 16:33:01,926 | INFO     | current chi2=3.212784234351105 (change=46.37431257758138 %)
[2024-05-16 09:33:19] 2024-05-16 16:33:01,926 | INFO     | model: linear, x: [1715868931.0, 1715868992.0, 1715869053.0, 1715869114.0, 1715869175.0, 1715869238.0, 1715869297.0, 1715869358.0, 1715869419.0, 1715869480.0, 1715
[2024-05-16 09:33:19] 2024-05-16 16:33:01,926 | INFO     | sum of square deviations: 762960484.3703679
[2024-05-16 09:33:19] 2024-05-16 16:33:01,927 | INFO     | sum of deviations: 25649470519.222244
[2024-05-16 09:33:19] 2024-05-16 16:33:01,927 | INFO     | mean x: 1715873018.8148148
[2024-05-16 09:33:19] 2024-05-16 16:33:01,927 | INFO     | mean y: 2654479.288888889
[2024-05-16 09:33:19] 2024-05-16 16:33:01,927 | INFO     | -- intersect: -57682160543.78492
[2024-05-16 09:33:19] 2024-05-16 16:33:01,927 | INFO     | intersect: -57682160543.78492
[2024-05-16 09:33:19] 2024-05-16 16:33:01,927 | INFO     | chi2: 1.861812110920623
[2024-05-16 09:33:19] 2024-05-16 16:33:01,927 | INFO     | current chi2=1.861812110920623 (change=42.0498864811985 %)
[2024-05-16 09:33:19] 2024-05-16 16:33:01,927 | INFO     | model: linear, x: [1715869238.0, 1715869297.0, 1715869358.0, 1715869419.0, 1715869480.0, 1715869543.0, 1715869605.0, 1715869663.0, 1715869730.0, 1715869785.0, 1715
[2024-05-16 09:33:19] 2024-05-16 16:33:01,927 | INFO     | sum of square deviations: 681260283.4230744
[2024-05-16 09:33:19] 2024-05-16 16:33:01,928 | INFO     | sum of deviations: 2241681485.9615383
[2024-05-16 09:33:19] 2024-05-16 16:33:01,928 | INFO     | mean x: 1715873171.3461537
[2024-05-16 09:33:19] 2024-05-16 16:33:01,928 | INFO     | mean y: 2697931.2230769233
[2024-05-16 09:33:19] 2024-05-16 16:33:01,928 | INFO     | -- intersect: -5643368945.210518
[2024-05-16 09:33:19] 2024-05-16 16:33:01,928 | INFO     | intersect: -5643368945.210518
[2024-05-16 09:33:19] 2024-05-16 16:33:01,928 | INFO     | chi2: 0.8935944299419101
[2024-05-16 09:33:19] 2024-05-16 16:33:01,928 | INFO     | current chi2=0.8935944299419101 (change=52.00404892091671 %)
[2024-05-16 09:33:19] 2024-05-16 16:33:01,928 | INFO     | model: linear, x: [1715869543.0, 1715869605.0, 1715869663.0, 1715869730.0, 1715869785.0, 1715869846.0, 1715869907.0, 1715869968.0, 1715870029.0, 1715870090.0, 1715
[2024-05-16 09:33:19] 2024-05-16 16:33:01,928 | INFO     | sum of square deviations: 605623054.6880002
[2024-05-16 09:33:19] 2024-05-16 16:33:01,928 | INFO     | sum of deviations: -4251721829.2559996
[2024-05-16 09:33:19] 2024-05-16 16:33:01,928 | INFO     | mean x: 1715873323.864
[2024-05-16 09:33:19] 2024-05-16 16:33:01,928 | INFO     | mean y: 2710929.632
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | -- intersect: 12048844264.283552
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | intersect: 12048844264.283552
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | chi2: 0.8180863925732331
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | current chi2=0.8180863925732331 (change=8.449922564265034 %)
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | left removable region: 40
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | model: linear, x: [1715870761.0, 1715870822.0, 1715870884.0, 1715870949.0, 1715871005.0, 1715871068.0, 1715871127.0, 1715871188.0, 1715871249.0, 1715871313.0, 1715
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | sum of square deviations: 300889672.7272731
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | sum of deviations: 2094665115.1212122
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | mean x: 1715873750.8484848
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | mean y: 2736314.474747475
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | -- intersect: -11942442312.883059
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | intersect: -11942442312.883059
[2024-05-16 09:33:19] 2024-05-16 16:33:01,929 | INFO     | chi2: 0.00016776913895252796
[2024-05-16 09:33:19] 2024-05-16 16:33:01,930 | INFO     | -- intersect: -11942442312.883059
[2024-05-16 09:33:19] 2024-05-16 16:33:01,930 | INFO     | current memory leak: 6.96 B/s (using 99 data points, chi2=0.00)
[2024-05-16 09:33:19] 2024-05-16 16:33:01,930 | INFO     | ..............................
[2024-05-16 09:33:19] 2024-05-16 16:33:01,930 | INFO     | . Timing measurements:
[2024-05-16 09:33:19] 2024-05-16 16:33:01,930 | INFO     | . get job = 0 s
[2024-05-16 09:33:19] 2024-05-16 16:33:01,930 | INFO     | . initial setup = 3 s
[2024-05-16 09:33:19] 2024-05-16 16:33:01,930 | INFO     | . payload setup = 60 s
[2024-05-16 09:33:19] 2024-05-16 16:33:01,930 | INFO     | . stage-in = 0 s
[2024-05-16 09:33:19] 2024-05-16 16:33:01,930 | INFO     | . payload execution = 8846 s
[2024-05-16 09:33:19] 2024-05-16 16:33:01,930 | INFO     | . stage-out = 5 s
[2024-05-16 09:33:19] 2024-05-16 16:33:01,930 | INFO     | . log creation = 3 s
[2024-05-16 09:33:19] 2024-05-16 16:33:01,930 | INFO     | ..............................
[2024-05-16 09:33:19] 2024-05-16 16:33:02,219 | INFO     | 
[2024-05-16 09:33:19] 2024-05-16 16:33:02,219 | INFO     | job summary report
[2024-05-16 09:33:19] 2024-05-16 16:33:02,219 | INFO     | --------------------------------------------------
[2024-05-16 09:33:19] 2024-05-16 16:33:02,219 | INFO     | PanDA job id: 6206903524
[2024-05-16 09:33:19] 2024-05-16 16:33:02,219 | INFO     | task id: 38776104
[2024-05-16 09:33:19] 2024-05-16 16:33:02,219 | INFO     | errors: (none)
[2024-05-16 09:33:19] 2024-05-16 16:33:02,219 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 09:33:19] 2024-05-16 16:33:02,219 | INFO     | pilot state: finished 
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | transexitcode: 0
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | exeerrorcode: 0
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | exeerrordiag: 
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | exitcode: 0
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | exitmsg: OK
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | cpuconsumptiontime: 27624 s
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | nevents: 400
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | neventsw: 0
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | pid: 38473
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | pgrp: 38473
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | corecount: 12
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | event service: False
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | sizes: {0: 2392148, 1: 2392148, 11: 2392176, 22: 2392204, 33: 2392232, 43: 2392260, 55: 2392416, 65: 2392444, 76: 2392472, 87: 2392528, 93: 2392762, 97: 2393070, 8
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | --------------------------------------------------
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | 
[2024-05-16 09:33:19] 2024-05-16 16:33:02,239 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-16 09:33:19] 2024-05-16 16:33:02,475 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,475 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | job 6206903524 has completed (purged errors)
[2024-05-16 09:33:19] 2024-05-16 16:33:02,476 | INFO     | overall cleanup function is called
[2024-05-16 09:33:19] 2024-05-16 16:33:03,483 | INFO     | --- collectZombieJob: --- 10, [38473]
[2024-05-16 09:33:19] 2024-05-16 16:33:03,484 | INFO     | zombie collector waiting for pid 38473
[2024-05-16 09:33:19] 2024-05-16 16:33:03,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 09:33:19] 2024-05-16 16:33:04,488 | INFO     | collected zombie processes
[2024-05-16 09:33:19] 2024-05-16 16:33:04,489 | INFO     | will now attempt to kill all subprocesses of pid=38473
[2024-05-16 09:33:19] 2024-05-16 16:33:04,668 | INFO     | process IDs to be killed: [38473] (in reverse order)
[2024-05-16 09:33:19] 2024-05-16 16:33:04,967 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 09:33:19] 2024-05-16 16:33:04,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 09:33:19] 2024-05-16 16:33:04,976 | INFO     | did not find any defunct processes belonging to 38473
[2024-05-16 09:33:19] 2024-05-16 16:33:04,984 | INFO     | did not find any defunct processes belonging to 38473
[2024-05-16 09:33:19] 2024-05-16 16:33:04,984 | INFO     | ready for new job
[2024-05-16 09:33:19] 2024-05-16 16:33:04,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 09:33:19] 2024-05-16 16:33:04,985 | INFO     | *************************************
[2024-05-16 09:33:19] 2024-05-16 16:33:04,985 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 09:33:19] 2024-05-16 16:33:04,985 | INFO     | *************************************
[2024-05-16 09:33:19] 2024-05-16 16:33:04,985 | INFO     | 
[2024-05-16 09:33:19] 2024-05-16 16:33:04,987 | INFO     | architecture information:
[2024-05-16 09:33:19] 2024-05-16 16:33:04,987 | INFO     | executing command: cat /etc/os-release
[2024-05-16 09:33:19] 2024-05-16 16:33:05,074 | INFO     | cat /etc/os-release:
[2024-05-16 09:33:19] NAME="CentOS Linux"
[2024-05-16 09:33:19] VERSION="7 (Core)"
[2024-05-16 09:33:19] ID="centos"
[2024-05-16 09:33:19] ID_LIKE="rhel fedora"
[2024-05-16 09:33:19] VERSION_ID="7"
[2024-05-16 09:33:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 09:33:19] ANSI_COLOR="0;31"
[2024-05-16 09:33:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 09:33:19] HOME_URL="https://www.centos.org/"
[2024-05-16 09:33:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 09:33:19] 
[2024-05-16 09:33:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 09:33:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 09:33:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 09:33:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 09:33:19] 
[2024-05-16 09:33:19] 2024-05-16 16:33:05,074 | INFO     | *************************************
[2024-05-16 09:33:19] 2024-05-16 16:33:05,577 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-16 09:33:19] 2024-05-16 16:33:05,734 | INFO     | sufficient remaining disk space (2474143383552 B)
[2024-05-16 09:33:19] 2024-05-16 16:33:05,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 09:33:19] 2024-05-16 16:33:05,734 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 09:33:19] 2024-05-16 16:33:05,734 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 09:33:19] 2024-05-16 16:33:05,735 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 09:33:19] 2024-05-16 16:33:05,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 09:33:19] 2024-05-16 16:33:05,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 09:33:19] 2024-05-16 16:33:05,735 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 09:33:19] 2024-05-16 16:33:06,024 | INFO     | all job control threads have been joined
[2024-05-16 09:33:19] 2024-05-16 16:33:06,400 | INFO     | all data control threads have been joined
[2024-05-16 09:33:19] 2024-05-16 16:33:06,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 09:33:19] 2024-05-16 16:33:06,590 | INFO     | aborting loop
[2024-05-16 09:33:19] 2024-05-16 16:33:06,740 | INFO     | [job] retrieve thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:06,812 | INFO     | [payload] failed_post thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:06,839 | INFO     | all payload control threads have been joined
[2024-05-16 09:33:19] 2024-05-16 16:33:06,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 09:33:19] 2024-05-16 16:33:07,029 | INFO     | [job] control thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:07,058 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:07,180 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:07,228 | INFO     | [data] copytool_in thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:07,263 | INFO     | [job] validate thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:07,317 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:07,410 | INFO     | [data] control thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:07,595 | INFO     | [job] job monitor thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:07,705 | INFO     | [payload] validate_post thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:07,740 | INFO     | [data] copytool_out thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:07,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 09:33:19] 2024-05-16 16:33:07,844 | INFO     | [payload] control thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:08,005 | INFO     | [job] queue monitor thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:08,066 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:11,790 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 09:33:19] 2024-05-16 16:33:12,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607423907648)>', '<ExcThread(monitor, started 140606475065088)>']
[2024-05-16 09:33:19] 2024-05-16 16:33:12,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 09:33:19] 2024-05-16 16:33:12,792 | INFO     | [monitor] control thread has ended
[2024-05-16 09:33:19] 2024-05-16 16:33:17,629 | INFO     | all workflow threads have been joined
[2024-05-16 09:33:19] 2024-05-16 16:33:17,630 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 09:33:19] 2024-05-16 16:33:17,630 | INFO     | traces error code: 0
[2024-05-16 09:33:19] 2024-05-16 16:33:17,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 09:33:19] 2024-05-16 16:33:17,744 [wrapper] ==== pilot stdout END ====
[2024-05-16 09:33:19] 2024-05-16 16:33:17,755 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 09:33:19] 2024-05-16 16:33:17,776 [wrapper] pilotpid: 5565
[2024-05-16 09:33:19] 2024-05-16 16:33:17,787 [wrapper] Pilot exit status: 0
[2024-05-16 09:33:19] 2024-05-16 16:33:17,974 [wrapper] pandaids: 6206903524
[2024-05-16 09:33:19] 2024-05-16 16:33:18,199 [wrapper] cleanup: SIGTERM to supervisor_pilot 118368 5566
[2024-05-16 09:33:19] 2024-05-16 16:33:18,244 [wrapper] Test setup, not cleaning
[2024-05-16 09:33:19] 2024-05-16 16:33:18,275 [wrapper] ==== wrapper stdout END ====
[2024-05-16 09:33:19] 2024-05-16 16:33:18,299 [wrapper] ==== wrapper stderr END ====
[2024-05-16 09:33:19] 2024-05-16 16:33:18,396 [wrapper] apfmon messages muted
[2024-05-16 09:33:19]  *** Error codes and diagnostics ***
[2024-05-16 09:33:19]     "exeErrorCode": 0,
[2024-05-16 09:33:19]     "exeErrorDiag": "",
[2024-05-16 09:33:19]     "pilotErrorCode": 0,
[2024-05-16 09:33:19]     "pilotErrorDiag": "",
[2024-05-16 09:33:19]  *** Listing of results directory ***
[2024-05-16 09:33:19] total 817004
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc    467845 May 15 10:48 pilot3.tar.gz
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc      5633 May 15 11:06 queuedata.json
[2024-05-16 09:33:19] -rwx------ 1 boinc boinc     32251 May 15 11:07 runpilot2-wrapper.sh
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc       100 May 16 06:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 09:33:19] -rwxr-xr-x 1 boinc boinc      7986 May 16 06:59 run_atlas
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc       105 May 16 06:59 job.xml
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc      6652 May 16 06:59 init_data.xml
[2024-05-16 09:33:19] -rw-r--r-- 2 boinc boinc 600784681 May 16 06:59 EVNT.38776100._000302.pool.root.1
[2024-05-16 09:33:19] -rw-r--r-- 2 boinc boinc     17537 May 16 06:59 start_atlas.sh
[2024-05-16 09:33:19] drwxrwx--x 2 boinc boinc      4096 May 16 06:59 shared
[2024-05-16 09:33:19] -rw-r--r-- 2 boinc boinc    480008 May 16 06:59 input.tar.gz
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc         0 May 16 06:59 boinc_lockfile
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc      2640 May 16 06:59 pandaJob.out
[2024-05-16 09:33:19] -rw------- 1 boinc boinc       424 May 16 06:59 setup.sh.local
[2024-05-16 09:33:19] -rw------- 1 boinc boinc   1014167 May 16 07:00 agis_schedconf.cvmfs.json
[2024-05-16 09:33:19] -rw------- 1 boinc boinc         0 May 16 07:01 agis_ddmendpoints.agis.ALL.json
[2024-05-16 09:33:19] -rw------- 1 boinc boinc   1324701 May 16 07:01 cric_ddmendpoints.json
[2024-05-16 09:33:19] drwx------ 4 boinc boinc      4096 May 16 07:01 pilot3
[2024-05-16 09:33:19] -rw------- 1 boinc boinc 230469572 May 16 09:31 HITS.38776104._007462.pool.root.1
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc       531 May 16 09:31 boinc_task_state.xml
[2024-05-16 09:33:19] -rw------- 1 boinc boinc      1070 May 16 09:32 memory_monitor_summary.json
[2024-05-16 09:33:19] -rw------- 1 boinc boinc    381586 May 16 09:32 log.38776104._007462.job.log.tgz.1
[2024-05-16 09:33:19] -rw------- 1 boinc boinc      7787 May 16 09:33 heartbeat.json
[2024-05-16 09:33:19] -rw------- 1 boinc boinc        95 May 16 09:33 pilot_heartbeat.json
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc      8192 May 16 09:33 boinc_mmap_file
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc        27 May 16 09:33 wrapper_checkpoint.txt
[2024-05-16 09:33:19] -rw------- 1 boinc boinc      4333 May 16 09:33 pilotlog.txt
[2024-05-16 09:33:19] -rw------- 1 boinc boinc    534798 May 16 09:33 log.38776104._007462.job.log.1
[2024-05-16 09:33:19] -rw------- 1 boinc boinc       357 May 16 09:33 output.list
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc       620 May 16 09:33 runtime_log
[2024-05-16 09:33:19] -rw------- 1 boinc boinc    931840 May 16 09:33 result.tar.gz
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc     11286 May 16 09:33 runtime_log.err
[2024-05-16 09:33:19] -rw------- 1 boinc boinc       658 May 16 09:33 dJBLDm4CYR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmJdOKDmcmAkgm.diag
[2024-05-16 09:33:19] -rw-r--r-- 1 boinc boinc     21968 May 16 09:33 stderr.txt
[2024-05-16 09:33:19] HITS file was successfully produced:
[2024-05-16 09:33:20] -rw------- 1 boinc boinc 230469572 May 16 09:31 shared/HITS.pool.root.1
[2024-05-16 09:33:20]  *** Contents of shared directory: ***
[2024-05-16 09:33:20] total 813184
[2024-05-16 09:33:20] -rw-r--r-- 2 boinc boinc 600784681 May 16 06:59 ATLAS.root_0
[2024-05-16 09:33:20] -rw-r--r-- 2 boinc boinc     17537 May 16 06:59 start_atlas.sh
[2024-05-16 09:33:20] -rw-r--r-- 2 boinc boinc    480008 May 16 06:59 input.tar.gz
[2024-05-16 09:33:20] -rw------- 1 boinc boinc 230469572 May 16 09:31 HITS.pool.root.1
[2024-05-16 09:33:20] -rw------- 1 boinc boinc    931840 May 16 09:33 result.tar.gz
09:33:21 (262189): run_atlas exited; CPU time 27209.998720
09:33:21 (262189): called boinc_finish(0)

</stderr_txt>
]]>

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