Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
09:47:06 (3173887): wrapper (7.7.26015): starting
09:47:06 (3173887): wrapper: running run_atlas (--nthreads 6)
[2024-05-18 09:47:06] Arguments: --nthreads 6
[2024-05-18 09:47:06] Threads: 6
[2024-05-18 09:47:06] Checking for CVMFS
[2024-05-18 09:47:06] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 09:47:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 09:47:06] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 09:47:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 09:47:06] 2.10.1.0 1411280 7193 66960 132871 2 56 4576775 6144000 0 130560 0 6952503 99.782 2165389 12051 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.202:3128 1
[2024-05-18 09:47:06] CVMFS is ok
[2024-05-18 09:47:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 09:47:06] Checking for apptainer binary...
[2024-05-18 09:47:06] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 09:47:06] Running /usr/bin/apptainer --version
[2024-05-18 09:47:06] apptainer version 1.2.5
[2024-05-18 09:47:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 09:47:07] Beta
[2024-05-18 09:47:07] apptainer works
[2024-05-18 09:47:07] Set ATHENA_PROC_NUMBER=6
[2024-05-18 09:47:07] Set ATHENA_CORE_NUMBER=6
[2024-05-18 09:47:07] Starting ATLAS job with PandaID=6206875196
[2024-05-18 09:47:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 11:10:04]  *** The last 200 lines of the pilot log: ***
[2024-05-18 11:10:04]  is_tar=False
[2024-05-18 11:10:04]  lfn=log.38776104._007232.job.log.tgz.1
[2024-05-18 11:10:04]  mtime=0
[2024-05-18 11:10:04]  protocol_id=None
[2024-05-18 11:10:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 11:10:04]  replicas=None
[2024-05-18 11:10:04]  scope=mc23_13p6TeV
[2024-05-18 11:10:04]  status=None
[2024-05-18 11:10:04]  status_code=0
[2024-05-18 11:10:04]  storage_token=
[2024-05-18 11:10:04]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6206875196/log.38776104._007232.job.log.tgz.1
[2024-05-18 11:10:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/b7/log.38776104._007232.job.log.tgz.1
[2024-05-18 11:10:04]  workdir=None
[2024-05-18 11:10:04] ]
[2024-05-18 11:10:04] 2024-05-18 09:09:31,533 | INFO     | transferring file log.38776104._007232.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6206875196/log.38776104._007232.job.log.tgz.1 to /var/lib/boinc/slots/
[2024-05-18 11:10:04] 2024-05-18 09:09:31,533 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6206875196/log.38776104._007232.job.log.tgz.1 /var/lib/boinc/slots/0/log.38776104._007232.job
[2024-05-18 11:10:04] 2024-05-18 09:09:31,545 | INFO     | adding to output.list: log.38776104._007232.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/b7/log.38776104._007232.job.log.tg
[2024-05-18 11:10:04] 2024-05-18 09:09:31,546 | INFO     | summary of transferred files:
[2024-05-18 11:10:04] 2024-05-18 09:09:31,546 | INFO     |  -- lfn=log.38776104._007232.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 11:10:04] 2024-05-18 09:09:31,546 | INFO     | stage-out finished correctly
[2024-05-18 11:10:04] 2024-05-18 09:09:33,774 | WARNING  | process 3184527 is no longer using CPU - aborting
[2024-05-18 11:10:04] 2024-05-18 09:09:33,774 | INFO     | will not send any job update
[2024-05-18 11:10:04] 2024-05-18 09:09:34,465 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 11:10:04] 2024-05-18 09:09:36,278 | INFO     | monitor loop #394: job 0:6206875196 is in state 'finished'
[2024-05-18 11:10:04] 2024-05-18 09:09:36,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 11:10:04] 2024-05-18 09:09:36,946 | INFO     | job 6206875196 has state=finished
[2024-05-18 11:10:04] 2024-05-18 09:09:36,946 | INFO     | preparing for final server update for job 6206875196 in state='finished'
[2024-05-18 11:10:04] 2024-05-18 09:09:36,947 | INFO     | this job has now completed (state=finished)
[2024-05-18 11:10:04] 2024-05-18 09:09:36,947 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 11:10:04] 2024-05-18 09:09:36,948 | INFO     | job 6206875196 has finished - writing final server update
[2024-05-18 11:10:04] 2024-05-18 09:09:36,948 | INFO     | total number of processed events: 400 (read)
[2024-05-18 11:10:04] 2024-05-18 09:09:36,952 | INFO     | executing command: lscpu
[2024-05-18 11:10:04] 2024-05-18 09:09:36,973 | INFO     | found 4 cores (4 cores per socket, 1 sockets)
[2024-05-18 11:10:04] 2024-05-18 09:09:36,974 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 11:10:04] 2024-05-18 09:09:37,008 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 11:10:04] 2024-05-18 09:09:38,782 | INFO     | monitor loop #395: job 0:6206875196 is in state 'finished'
[2024-05-18 11:10:04] 2024-05-18 09:09:38,782 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 11:10:04] 2024-05-18 09:09:41,285 | INFO     | monitor loop #396: job 0:6206875196 is in state 'finished'
[2024-05-18 11:10:04] 2024-05-18 09:09:41,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 11:10:04] 2024-05-18 09:09:43,344 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-18 11:10:04] 2024-05-18 09:09:43,344 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6206875196/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 11:10:04] 2024-05-18 09:09:43,345 | INFO     | extracted standard info from prmon json
[2024-05-18 11:10:04] 2024-05-18 09:09:43,345 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 11:10:04] 2024-05-18 09:09:43,345 | WARNING  | GPU info not found in prmon json
[2024-05-18 11:10:04] 2024-05-18 09:09:43,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 11:10:04] 2024-05-18 09:09:43,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 11:10:04] 2024-05-18 09:09:43,347 | INFO     | fitting pss+swap vs Time
[2024-05-18 11:10:04] 2024-05-18 09:09:43,347 | INFO     | model: linear, x: [1716018757.0, 1716018818.0, 1716018879.0, 1716018940.0, 1716019001.0, 1716019062.0, 1716019123.0, 1716019184.0, 1716019245.0, 1716019306.0, 1716
[2024-05-18 11:10:04] 2024-05-18 09:09:43,347 | INFO     | sum of square deviations: 125630262.5
[2024-05-18 11:10:04] 2024-05-18 09:09:43,347 | INFO     | sum of deviations: -11511803032.499998
[2024-05-18 11:10:04] 2024-05-18 09:09:43,347 | INFO     | mean x: 1716020983.5
[2024-05-18 11:10:04] 2024-05-18 09:09:43,347 | INFO     | mean y: 2676546.0135135134
[2024-05-18 11:10:04] 2024-05-18 09:09:43,347 | INFO     | -- intersect: 157245805459.23163
[2024-05-18 11:10:04] 2024-05-18 09:09:43,347 | INFO     | intersect: 157245805459.23163
[2024-05-18 11:10:04] 2024-05-18 09:09:43,347 | INFO     | chi2: 0.13289483103779717
[2024-05-18 11:10:04] 2024-05-18 09:09:43,347 | INFO     | -- intersect: 157245805459.23163
[2024-05-18 11:10:04] 2024-05-18 09:09:43,347 | INFO     | current memory leak: -91.63 B/s (using 74 data points, chi2=0.13)
[2024-05-18 11:10:04] 2024-05-18 09:09:43,348 | INFO     | ..............................
[2024-05-18 11:10:04] 2024-05-18 09:09:43,348 | INFO     | . Timing measurements:
[2024-05-18 11:10:04] 2024-05-18 09:09:43,348 | INFO     | . get job = 0 s
[2024-05-18 11:10:04] 2024-05-18 09:09:43,348 | INFO     | . initial setup = 0 s
[2024-05-18 11:10:04] 2024-05-18 09:09:43,348 | INFO     | . payload setup = 3 s
[2024-05-18 11:10:04] 2024-05-18 09:09:43,348 | INFO     | . stage-in = 0 s
[2024-05-18 11:10:04] 2024-05-18 09:09:43,348 | INFO     | . payload execution = 4917 s
[2024-05-18 11:10:04] 2024-05-18 09:09:43,348 | INFO     | . stage-out = 0 s
[2024-05-18 11:10:04] 2024-05-18 09:09:43,348 | INFO     | . log creation = 0 s
[2024-05-18 11:10:04] 2024-05-18 09:09:43,348 | INFO     | ..............................
[2024-05-18 11:10:04] 2024-05-18 09:09:43,385 | INFO     | 
[2024-05-18 11:10:04] 2024-05-18 09:09:43,385 | INFO     | job summary report
[2024-05-18 11:10:04] 2024-05-18 09:09:43,385 | INFO     | --------------------------------------------------
[2024-05-18 11:10:04] 2024-05-18 09:09:43,385 | INFO     | PanDA job id: 6206875196
[2024-05-18 11:10:04] 2024-05-18 09:09:43,385 | INFO     | task id: 38776104
[2024-05-18 11:10:04] 2024-05-18 09:09:43,385 | INFO     | errors: (none)
[2024-05-18 11:10:04] 2024-05-18 09:09:43,385 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 11:10:04] 2024-05-18 09:09:43,385 | INFO     | pilot state: finished 
[2024-05-18 11:10:04] 2024-05-18 09:09:43,385 | INFO     | transexitcode: 0
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | exeerrorcode: 0
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | exeerrordiag: 
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | exitcode: 0
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | exitmsg: OK
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | cpuconsumptiontime: 27560 s
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | nevents: 400
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | neventsw: 0
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | pid: 3184527
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | pgrp: 3184527
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | corecount: 6
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | event service: False
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | sizes: {0: 2392202, 2: 2392408, 11: 2392436, 4924: 2418644, 4925: 2427604, 4928: 2427660, 4937: 2427958}
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | --------------------------------------------------
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | 
[2024-05-18 11:10:04] 2024-05-18 09:09:43,386 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-05-18 11:10:04] 2024-05-18 09:09:43,399 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,399 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,399 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,399 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | job 6206875196 has completed (purged errors)
[2024-05-18 11:10:04] 2024-05-18 09:09:43,400 | INFO     | overall cleanup function is called
[2024-05-18 11:10:04] 2024-05-18 09:09:44,407 | INFO     | --- collectZombieJob: --- 10, [3184527]
[2024-05-18 11:10:04] 2024-05-18 09:09:44,407 | INFO     | zombie collector waiting for pid 3184527
[2024-05-18 11:10:04] 2024-05-18 09:09:44,407 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 11:10:04] 2024-05-18 09:09:45,413 | INFO     | collected zombie processes
[2024-05-18 11:10:04] 2024-05-18 09:09:45,413 | INFO     | will now attempt to kill all subprocesses of pid=3184527
[2024-05-18 11:10:04] 2024-05-18 09:09:45,461 | INFO     | process IDs to be killed: [3184527] (in reverse order)
[2024-05-18 11:10:04] 2024-05-18 09:09:45,485 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 11:10:04] 2024-05-18 09:09:45,486 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 11:10:04] 2024-05-18 09:09:45,487 | INFO     | did not find any defunct processes belonging to 3184527
[2024-05-18 11:10:04] 2024-05-18 09:09:45,488 | INFO     | did not find any defunct processes belonging to 3184527
[2024-05-18 11:10:04] 2024-05-18 09:09:45,488 | INFO     | ready for new job
[2024-05-18 11:10:04] 2024-05-18 09:09:45,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 11:10:04] 2024-05-18 09:09:45,489 | INFO     | *************************************
[2024-05-18 11:10:04] 2024-05-18 09:09:45,489 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 11:10:04] 2024-05-18 09:09:45,489 | INFO     | *************************************
[2024-05-18 11:10:04] 2024-05-18 09:09:45,489 | INFO     | 
[2024-05-18 11:10:04] 2024-05-18 09:09:45,490 | INFO     | architecture information:
[2024-05-18 11:10:04] 2024-05-18 09:09:45,490 | INFO     | executing command: cat /etc/os-release
[2024-05-18 11:10:04] 2024-05-18 09:09:45,498 | INFO     | cat /etc/os-release:
[2024-05-18 11:10:04] NAME="CentOS Linux"
[2024-05-18 11:10:04] VERSION="7 (Core)"
[2024-05-18 11:10:04] ID="centos"
[2024-05-18 11:10:04] ID_LIKE="rhel fedora"
[2024-05-18 11:10:04] VERSION_ID="7"
[2024-05-18 11:10:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 11:10:04] ANSI_COLOR="0;31"
[2024-05-18 11:10:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 11:10:04] HOME_URL="https://www.centos.org/"
[2024-05-18 11:10:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 11:10:04] 
[2024-05-18 11:10:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 11:10:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 11:10:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 11:10:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 11:10:04] 
[2024-05-18 11:10:04] 2024-05-18 09:09:45,498 | INFO     | *************************************
[2024-05-18 11:10:04] 2024-05-18 09:09:46,000 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-05-18 11:10:04] 2024-05-18 09:09:46,016 | INFO     | sufficient remaining disk space (274941870080 B)
[2024-05-18 11:10:04] 2024-05-18 09:09:46,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 11:10:04] 2024-05-18 09:09:46,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 11:10:04] 2024-05-18 09:09:46,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 11:10:04] 2024-05-18 09:09:46,079 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 11:10:04] 2024-05-18 09:09:46,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 11:10:04] 2024-05-18 09:09:46,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 11:10:04] 2024-05-18 09:09:46,297 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 11:10:04] 2024-05-18 09:09:46,298 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 11:10:04] 2024-05-18 09:09:46,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 11:10:04] 2024-05-18 09:09:46,298 | INFO     | will abort loop
[2024-05-18 11:10:04] 2024-05-18 09:09:46,495 | INFO     | all job control threads have been joined
[2024-05-18 11:10:04] 2024-05-18 09:09:47,022 | INFO     | [job] retrieve thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:47,062 | INFO     | all data control threads have been joined
[2024-05-18 11:10:04] 2024-05-18 09:09:47,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 11:10:04] 2024-05-18 09:09:47,138 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:47,178 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:47,290 | INFO     | [payload] validate_post thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:47,304 | INFO     | [job] job monitor thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:47,392 | INFO     | all payload control threads have been joined
[2024-05-18 11:10:04] 2024-05-18 09:09:47,501 | INFO     | [job] control thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:47,637 | INFO     | [payload] failed_post thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:47,750 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:47,765 | INFO     | [data] copytool_in thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:48,068 | INFO     | [data] control thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:48,397 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 11:10:04] 2024-05-18 09:09:48,398 | INFO     | [payload] control thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:48,456 | INFO     | [job] validate thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:49,110 | INFO     | [data] copytool_out thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:49,404 | INFO     | [job] queue monitor thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:50,023 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:56,459 | INFO     | job.realtimelogging is not enabled
[2024-05-18 11:10:04] 2024-05-18 09:09:57,465 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 11:10:04] 2024-05-18 09:09:59,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433305626432)>', '<ExcThread(monitor, started 140432780539648)>']
[2024-05-18 11:10:04] 2024-05-18 09:10:00,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 11:10:04] 2024-05-18 09:10:00,144 | INFO     | [monitor] control thread has ended
[2024-05-18 11:10:04] 2024-05-18 09:10:04,389 | INFO     | all workflow threads have been joined
[2024-05-18 11:10:04] 2024-05-18 09:10:04,390 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 11:10:04] 2024-05-18 09:10:04,390 | INFO     | traces error code: 0
[2024-05-18 11:10:04] 2024-05-18 09:10:04,391 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 11:10:04] 2024-05-18 09:10:04,439 [wrapper] ==== pilot stdout END ====
[2024-05-18 11:10:04] 2024-05-18 09:10:04,441 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 11:10:04] 2024-05-18 09:10:04,443 [wrapper] pilotpid: 3178089
[2024-05-18 11:10:04] 2024-05-18 09:10:04,445 [wrapper] Pilot exit status: 0
[2024-05-18 11:10:04] 2024-05-18 09:10:04,451 [wrapper] pandaids: 6206875196
[2024-05-18 11:10:04] 2024-05-18 09:10:04,467 [wrapper] cleanup: SIGTERM to supervisor_pilot 3196996 3178090
[2024-05-18 11:10:04] 2024-05-18 09:10:04,468 [wrapper] Test setup, not cleaning
[2024-05-18 11:10:04] 2024-05-18 09:10:04,469 [wrapper] ==== wrapper stdout END ====
[2024-05-18 11:10:04] 2024-05-18 09:10:04,471 [wrapper] ==== wrapper stderr END ====
[2024-05-18 11:10:04] 2024-05-18 09:10:04,474 [wrapper] apfmon messages muted
[2024-05-18 11:10:04]  *** Error codes and diagnostics ***
[2024-05-18 11:10:04]     "exeErrorCode": 0,
[2024-05-18 11:10:04]     "exeErrorDiag": "",
[2024-05-18 11:10:04]     "pilotErrorCode": 0,
[2024-05-18 11:10:04]     "pilotErrorDiag": "",
[2024-05-18 11:10:04]  *** Listing of results directory ***
[2024-05-18 11:10:04] insgesamt 822216
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc    467845 15. Mai 19:28 pilot3.tar.gz
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc      5633 15. Mai 19:29 queuedata.json
[2024-05-18 11:10:04] -rwx------ 1 boinc boinc     32251 15. Mai 19:30 runpilot2-wrapper.sh
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc       100 18. Mai 09:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 11:10:04] -rwxr-xr-x 1 boinc boinc      7986 18. Mai 09:46 run_atlas
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc       105 18. Mai 09:46 job.xml
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc      6703 18. Mai 09:47 init_data.xml
[2024-05-18 11:10:04] -rw-r--r-- 2 boinc boinc 600376351 18. Mai 09:47 EVNT.38776100._000293.pool.root.1
[2024-05-18 11:10:04] drwxrwx--x 2 boinc boinc      4096 18. Mai 09:47 shared
[2024-05-18 11:10:04] -rw-r--r-- 2 boinc boinc    480005 18. Mai 09:47 input.tar.gz
[2024-05-18 11:10:04] -rw-r--r-- 2 boinc boinc     17537 18. Mai 09:47 start_atlas.sh
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc         0 18. Mai 09:47 boinc_lockfile
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc      2641 18. Mai 09:47 pandaJob.out
[2024-05-18 11:10:04] -rw------- 1 boinc boinc       462 18. Mai 09:47 setup.sh.local
[2024-05-18 11:10:04] -rw------- 1 boinc boinc   1019073 18. Mai 09:47 agis_schedconf.cvmfs.json
[2024-05-18 11:10:04] -rw------- 1 boinc boinc         0 18. Mai 09:47 agis_ddmendpoints.agis.ALL.json
[2024-05-18 11:10:04] -rw------- 1 boinc boinc   1324701 18. Mai 09:47 cric_ddmendpoints.json
[2024-05-18 11:10:04] drwx------ 4 boinc boinc      4096 18. Mai 09:47 pilot3
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc       530 18. Mai 11:09 boinc_task_state.xml
[2024-05-18 11:10:04] -rw------- 1 boinc boinc 236519890 18. Mai 11:09 HITS.38776104._007232.pool.root.1
[2024-05-18 11:10:04] -rw------- 1 boinc boinc        95 18. Mai 11:09 pilot_heartbeat.json
[2024-05-18 11:10:04] -rw------- 1 boinc boinc      1027 18. Mai 11:09 memory_monitor_summary.json
[2024-05-18 11:10:04] -rw------- 1 boinc boinc    261627 18. Mai 11:09 log.38776104._007232.job.log.tgz.1
[2024-05-18 11:10:04] -rw------- 1 boinc boinc      7683 18. Mai 11:09 heartbeat.json
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc      8192 18. Mai 11:10 boinc_mmap_file
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc        27 18. Mai 11:10 wrapper_checkpoint.txt
[2024-05-18 11:10:04] -rw------- 1 boinc boinc      4470 18. Mai 11:10 pilotlog.txt
[2024-05-18 11:10:04] -rw------- 1 boinc boinc    499650 18. Mai 11:10 log.38776104._007232.job.log.1
[2024-05-18 11:10:04] -rw------- 1 boinc boinc       357 18. Mai 11:10 output.list
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc       620 18. Mai 11:10 runtime_log
[2024-05-18 11:10:04] -rw------- 1 boinc boinc    778240 18. Mai 11:10 result.tar.gz
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc     11316 18. Mai 11:10 runtime_log.err
[2024-05-18 11:10:04] -rw------- 1 boinc boinc       627 18. Mai 11:10 MpNNDmVdXR5n7Olcko1bjSoqABFKDmABFKDmOtvXDmLrYKDmWtyKpm.diag
[2024-05-18 11:10:04] -rw-r--r-- 1 boinc boinc     21198 18. Mai 11:10 stderr.txt
[2024-05-18 11:10:04] HITS file was successfully produced:
[2024-05-18 11:10:04] -rw------- 1 boinc boinc 236519890 18. Mai 11:09 shared/HITS.pool.root.1
[2024-05-18 11:10:04]  *** Contents of shared directory: ***
[2024-05-18 11:10:04] insgesamt 818548
[2024-05-18 11:10:04] -rw-r--r-- 2 boinc boinc 600376351 18. Mai 09:47 ATLAS.root_0
[2024-05-18 11:10:04] -rw-r--r-- 2 boinc boinc    480005 18. Mai 09:47 input.tar.gz
[2024-05-18 11:10:04] -rw-r--r-- 2 boinc boinc     17537 18. Mai 09:47 start_atlas.sh
[2024-05-18 11:10:04] -rw------- 1 boinc boinc 236519890 18. Mai 11:09 HITS.pool.root.1
[2024-05-18 11:10:04] -rw------- 1 boinc boinc    778240 18. Mai 11:10 result.tar.gz
11:10:05 (3173887): run_atlas exited; CPU time 27550.782762
11:10:05 (3173887): called boinc_finish(0)

</stderr_txt>
]]>

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