Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:21:07 (3529924): wrapper (7.7.26015): starting
10:21:07 (3529924): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 10:21:07] Arguments: --nthreads 4
[2024-05-19 10:21:07] Threads: 4
[2024-05-19 10:21:07] Checking for CVMFS
[2024-05-19 10:21:07] No cvmfs_config command found, will try listing directly
[2024-05-19 10:21:07] CVMFS is ok
[2024-05-19 10:21:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 10:21:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 10:21:07] Further information can be found at the LHC@home message board.
[2024-05-19 10:21:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 10:21:07] Checking for apptainer binary...
[2024-05-19 10:21:07] which: no apptainer in ((null))
[2024-05-19 10:21:07] apptainer is not installed, using version from CVMFS
[2024-05-19 10:21:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 10:21:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-05-19 10:21:07] apptainer works
[2024-05-19 10:21:07] Set ATHENA_PROC_NUMBER=4
[2024-05-19 10:21:07] Set ATHENA_CORE_NUMBER=4
[2024-05-19 10:21:07] Starting ATLAS job with PandaID=6206857534
[2024-05-19 10:21:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 19:34:48]  *** The last 200 lines of the pilot log: ***
[2024-05-19 19:34:48] 2024-05-19 17:34:33,731 | INFO     | fitting pss+swap vs Time
[2024-05-19 19:34:48] 2024-05-19 17:34:33,732 | INFO     | model: linear, x: [1716106901.0, 1716106962.0, 1716107023.0, 1716107084.0, 1716107145.0, 1716107206.0, 1716107267.0, 1716107328.0, 1716107389.0, 1716107450.0, 1716
[2024-05-19 19:34:48] 2024-05-19 17:34:33,732 | INFO     | sum of square deviations: 49919894120.0
[2024-05-19 19:34:48] 2024-05-19 17:34:33,740 | INFO     | sum of deviations: 122814448972.5
[2024-05-19 19:34:48] 2024-05-19 17:34:33,740 | INFO     | mean x: 1716123462.5
[2024-05-19 19:34:48] 2024-05-19 17:34:33,740 | INFO     | mean y: 2348649.751838235
[2024-05-19 19:34:48] 2024-05-19 17:34:33,740 | INFO     | -- intersect: -4219710734.2097774
[2024-05-19 19:34:48] 2024-05-19 17:34:33,740 | INFO     | intersect: -4219710734.2097774
[2024-05-19 19:34:48] 2024-05-19 17:34:33,741 | INFO     | chi2: 3.6287135257863183
[2024-05-19 19:34:48] 2024-05-19 17:34:33,742 | INFO     | model: linear, x: [1716106901.0, 1716106962.0, 1716107023.0, 1716107084.0, 1716107145.0, 1716107206.0, 1716107267.0, 1716107328.0, 1716107389.0, 1716107450.0, 1716
[2024-05-19 19:34:48] 2024-05-19 17:34:33,742 | INFO     | sum of square deviations: 48556035990.0
[2024-05-19 19:34:48] 2024-05-19 17:34:33,749 | INFO     | sum of deviations: 121398674139.00005
[2024-05-19 19:34:48] 2024-05-19 17:34:33,749 | INFO     | mean x: 1716123310.0
[2024-05-19 19:34:48] 2024-05-19 17:34:33,749 | INFO     | mean y: 2348491.4304267163
[2024-05-19 19:34:48] 2024-05-19 17:34:33,750 | INFO     | -- intersect: -4288263174.9736896
[2024-05-19 19:34:48] 2024-05-19 17:34:33,750 | INFO     | intersect: -4288263174.9736896
[2024-05-19 19:34:48] 2024-05-19 17:34:33,750 | INFO     | chi2: 3.629490863169805
[2024-05-19 19:34:48] 2024-05-19 17:34:33,751 | INFO     | current chi2=3.629490863169805 (change=-0.021421844903512673 %)
[2024-05-19 19:34:48] 2024-05-19 17:34:33,751 | INFO     | right removable region: 538
[2024-05-19 19:34:48] 2024-05-19 17:34:33,751 | INFO     | model: linear, x: [1716107206.0, 1716107267.0, 1716107328.0, 1716107389.0, 1716107450.0, 1716107511.0, 1716107572.0, 1716107633.0, 1716107694.0, 1716107755.0, 1716
[2024-05-19 19:34:48] 2024-05-19 17:34:33,752 | INFO     | sum of square deviations: 48556035990.0
[2024-05-19 19:34:48] 2024-05-19 17:34:33,758 | INFO     | sum of deviations: 3836172636.0000086
[2024-05-19 19:34:48] 2024-05-19 17:34:33,759 | INFO     | mean x: 1716123615.0
[2024-05-19 19:34:48] 2024-05-19 17:34:33,759 | INFO     | mean y: 2361935.3636363638
[2024-05-19 19:34:48] 2024-05-19 17:34:33,759 | INFO     | -- intersect: -133220517.31458966
[2024-05-19 19:34:48] 2024-05-19 17:34:33,759 | INFO     | intersect: -133220517.31458966
[2024-05-19 19:34:48] 2024-05-19 17:34:33,760 | INFO     | chi2: 1.4743491916939455
[2024-05-19 19:34:48] 2024-05-19 17:34:33,760 | INFO     | current chi2=1.4743491916939455 (change=59.36992046308026 %)
[2024-05-19 19:34:48] 2024-05-19 17:34:33,760 | INFO     | model: linear, x: [1716107511.0, 1716107572.0, 1716107633.0, 1716107694.0, 1716107755.0, 1716107816.0, 1716107877.0, 1716107938.0, 1716107999.0, 1716108060.0, 1716
[2024-05-19 19:34:48] 2024-05-19 17:34:33,761 | INFO     | sum of square deviations: 47217248097.5
[2024-05-19 19:34:48] 2024-05-19 17:34:33,767 | INFO     | sum of deviations: -86450388920.49997
[2024-05-19 19:34:48] 2024-05-19 17:34:33,767 | INFO     | mean x: 1716123767.5
[2024-05-19 19:34:48] 2024-05-19 17:34:33,767 | INFO     | mean y: 2372219.6086142324
[2024-05-19 19:34:48] 2024-05-19 17:34:33,767 | INFO     | -- intersect: 3144435196.886272
[2024-05-19 19:34:48] 2024-05-19 17:34:33,767 | INFO     | intersect: 3144435196.886272
[2024-05-19 19:34:48] 2024-05-19 17:34:33,768 | INFO     | chi2: 0.3428594658426002
[2024-05-19 19:34:48] 2024-05-19 17:34:33,768 | INFO     | current chi2=0.3428594658426002 (change=76.74502975454047 %)
[2024-05-19 19:34:48] 2024-05-19 17:34:33,769 | INFO     | model: linear, x: [1716107816.0, 1716107877.0, 1716107938.0, 1716107999.0, 1716108060.0, 1716108121.0, 1716108182.0, 1716108243.0, 1716108304.0, 1716108365.0, 1716
[2024-05-19 19:34:48] 2024-05-19 17:34:33,769 | INFO     | sum of square deviations: 45903297880.0
[2024-05-19 19:34:48] 2024-05-19 17:34:33,775 | INFO     | sum of deviations: -92037520715.00002
[2024-05-19 19:34:48] 2024-05-19 17:34:33,775 | INFO     | mean x: 1716123920.0
[2024-05-19 19:34:48] 2024-05-19 17:34:33,775 | INFO     | mean y: 2372861.291115312
[2024-05-19 19:34:48] 2024-05-19 17:34:33,775 | INFO     | -- intersect: 3443253977.271339
[2024-05-19 19:34:48] 2024-05-19 17:34:33,775 | INFO     | intersect: 3443253977.271339
[2024-05-19 19:34:48] 2024-05-19 17:34:33,776 | INFO     | chi2: 0.3102983835204918
[2024-05-19 19:34:48] 2024-05-19 17:34:33,776 | INFO     | current chi2=0.3102983835204918 (change=9.496917998774602 %)
[2024-05-19 19:34:48] 2024-05-19 17:34:33,776 | INFO     | left removable region: 30
[2024-05-19 19:34:48] 2024-05-19 17:34:33,777 | INFO     | model: linear, x: [1716108731.0, 1716108792.0, 1716108853.0, 1716108914.0, 1716108975.0, 1716109036.0, 1716109097.0, 1716109158.0, 1716109219.0, 1716109280.0, 1716
[2024-05-19 19:34:48] 2024-05-19 17:34:33,777 | INFO     | sum of square deviations: 40650685907.0
[2024-05-19 19:34:48] 2024-05-19 17:34:33,782 | INFO     | sum of deviations: -46449029438.99998
[2024-05-19 19:34:48] 2024-05-19 17:34:33,782 | INFO     | mean x: 1716124194.5
[2024-05-19 19:34:48] 2024-05-19 17:34:33,782 | INFO     | mean y: 2367385.724409449
[2024-05-19 19:34:48] 2024-05-19 17:34:33,782 | INFO     | -- intersect: 1963276567.2736502
[2024-05-19 19:34:48] 2024-05-19 17:34:33,782 | INFO     | intersect: 1963276567.2736502
[2024-05-19 19:34:48] 2024-05-19 17:34:33,783 | INFO     | chi2: 0.23636277711210657
[2024-05-19 19:34:48] 2024-05-19 17:34:33,783 | INFO     | -- intersect: 1963276567.2736502
[2024-05-19 19:34:48] 2024-05-19 17:34:33,783 | INFO     | current memory leak: -1.14 B/s (using 508 data points, chi2=0.24)
[2024-05-19 19:34:48] 2024-05-19 17:34:33,784 | INFO     | ..............................
[2024-05-19 19:34:48] 2024-05-19 17:34:33,784 | INFO     | . Timing measurements:
[2024-05-19 19:34:48] 2024-05-19 17:34:33,784 | INFO     | . get job = 0 s
[2024-05-19 19:34:48] 2024-05-19 17:34:33,784 | INFO     | . initial setup = 1 s
[2024-05-19 19:34:48] 2024-05-19 17:34:33,784 | INFO     | . payload setup = 4 s
[2024-05-19 19:34:48] 2024-05-19 17:34:33,784 | INFO     | . stage-in = 0 s
[2024-05-19 19:34:48] 2024-05-19 17:34:33,784 | INFO     | . payload execution = 33167 s
[2024-05-19 19:34:48] 2024-05-19 17:34:33,784 | INFO     | . stage-out = 1 s
[2024-05-19 19:34:48] 2024-05-19 17:34:33,784 | INFO     | . log creation = 0 s
[2024-05-19 19:34:48] 2024-05-19 17:34:33,784 | INFO     | ..............................
[2024-05-19 19:34:48] 2024-05-19 17:34:34,227 | INFO     | 
[2024-05-19 19:34:48] 2024-05-19 17:34:34,228 | INFO     | job summary report
[2024-05-19 19:34:48] 2024-05-19 17:34:34,228 | INFO     | --------------------------------------------------
[2024-05-19 19:34:48] 2024-05-19 17:34:34,228 | INFO     | PanDA job id: 6206857534
[2024-05-19 19:34:48] 2024-05-19 17:34:34,228 | INFO     | task id: 38921007
[2024-05-19 19:34:48] 2024-05-19 17:34:34,228 | INFO     | errors: (none)
[2024-05-19 19:34:48] 2024-05-19 17:34:34,228 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 19:34:48] 2024-05-19 17:34:34,228 | INFO     | pilot state: finished 
[2024-05-19 19:34:48] 2024-05-19 17:34:34,229 | INFO     | transexitcode: 0
[2024-05-19 19:34:48] 2024-05-19 17:34:34,229 | INFO     | exeerrorcode: 0
[2024-05-19 19:34:48] 2024-05-19 17:34:34,229 | INFO     | exeerrordiag: 
[2024-05-19 19:34:48] 2024-05-19 17:34:34,229 | INFO     | exitcode: 0
[2024-05-19 19:34:48] 2024-05-19 17:34:34,229 | INFO     | exitmsg: OK
[2024-05-19 19:34:48] 2024-05-19 17:34:34,229 | INFO     | cpuconsumptiontime: 129329 s
[2024-05-19 19:34:48] 2024-05-19 17:34:34,229 | INFO     | nevents: 400
[2024-05-19 19:34:48] 2024-05-19 17:34:34,229 | INFO     | neventsw: 0
[2024-05-19 19:34:48] 2024-05-19 17:34:34,229 | INFO     | pid: 3541346
[2024-05-19 19:34:48] 2024-05-19 17:34:34,230 | INFO     | pgrp: 3541346
[2024-05-19 19:34:48] 2024-05-19 17:34:34,230 | INFO     | corecount: 4
[2024-05-19 19:34:48] 2024-05-19 17:34:34,230 | INFO     | event service: False
[2024-05-19 19:34:48] 2024-05-19 17:34:34,230 | INFO     | sizes: {0: 2392148, 4: 2392354, 11: 2392382, 33175: 2431945, 33178: 2440983, 33181: 2441097}
[2024-05-19 19:34:48] 2024-05-19 17:34:34,230 | INFO     | --------------------------------------------------
[2024-05-19 19:34:48] 2024-05-19 17:34:34,230 | INFO     | 
[2024-05-19 19:34:48] 2024-05-19 17:34:34,230 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-05-19 19:34:48] 2024-05-19 17:34:34,253 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,254 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,254 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,254 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,256 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 19:34:48] 2024-05-19 17:34:34,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,256 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 19:34:48] 2024-05-19 17:34:34,256 | INFO     | job 6206857534 has completed (purged errors)
[2024-05-19 19:34:48] 2024-05-19 17:34:34,257 | INFO     | overall cleanup function is called
[2024-05-19 19:34:48] 2024-05-19 17:34:35,259 | INFO     | --- collectZombieJob: --- 10, [3541346]
[2024-05-19 19:34:48] 2024-05-19 17:34:35,260 | INFO     | zombie collector waiting for pid 3541346
[2024-05-19 19:34:48] 2024-05-19 17:34:35,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 19:34:48] 2024-05-19 17:34:36,265 | INFO     | collected zombie processes
[2024-05-19 19:34:48] 2024-05-19 17:34:36,265 | INFO     | will now attempt to kill all subprocesses of pid=3541346
[2024-05-19 19:34:48] 2024-05-19 17:34:36,386 | INFO     | process IDs to be killed: [3541346] (in reverse order)
[2024-05-19 19:34:48] 2024-05-19 17:34:36,472 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 19:34:48] 2024-05-19 17:34:36,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 19:34:48] 2024-05-19 17:34:36,477 | INFO     | did not find any defunct processes belonging to 3541346
[2024-05-19 19:34:48] 2024-05-19 17:34:36,481 | INFO     | did not find any defunct processes belonging to 3541346
[2024-05-19 19:34:48] 2024-05-19 17:34:36,481 | INFO     | ready for new job
[2024-05-19 19:34:48] 2024-05-19 17:34:36,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 19:34:48] 2024-05-19 17:34:36,483 | INFO     | *************************************
[2024-05-19 19:34:48] 2024-05-19 17:34:36,484 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 19:34:48] 2024-05-19 17:34:36,484 | INFO     | *************************************
[2024-05-19 19:34:48] 2024-05-19 17:34:36,484 | INFO     | 
[2024-05-19 19:34:48] 2024-05-19 17:34:36,485 | INFO     | architecture information:
[2024-05-19 19:34:48] 2024-05-19 17:34:36,486 | INFO     | executing command: cat /etc/os-release
[2024-05-19 19:34:48] 2024-05-19 17:34:36,498 | INFO     | cat /etc/os-release:
[2024-05-19 19:34:48] NAME="CentOS Linux"
[2024-05-19 19:34:48] VERSION="7 (Core)"
[2024-05-19 19:34:48] ID="centos"
[2024-05-19 19:34:48] ID_LIKE="rhel fedora"
[2024-05-19 19:34:48] VERSION_ID="7"
[2024-05-19 19:34:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 19:34:48] ANSI_COLOR="0;31"
[2024-05-19 19:34:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 19:34:48] HOME_URL="https://www.centos.org/"
[2024-05-19 19:34:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 19:34:48] 
[2024-05-19 19:34:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 19:34:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 19:34:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 19:34:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 19:34:48] 
[2024-05-19 19:34:48] 2024-05-19 17:34:36,498 | INFO     | *************************************
[2024-05-19 19:34:48] 2024-05-19 17:34:37,002 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-05-19 19:34:48] 2024-05-19 17:34:37,021 | INFO     | sufficient remaining disk space (1631603130368 B)
[2024-05-19 19:34:48] 2024-05-19 17:34:37,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 19:34:48] 2024-05-19 17:34:37,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 19:34:48] 2024-05-19 17:34:37,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 19:34:48] 2024-05-19 17:34:37,023 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 19:34:48] 2024-05-19 17:34:37,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 19:34:48] 2024-05-19 17:34:37,023 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 19:34:48] 2024-05-19 17:34:37,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 19:34:48] 2024-05-19 17:34:37,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 19:34:48] 2024-05-19 17:34:37,142 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-19 19:34:48] 2024-05-19 17:34:37,142 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-19 19:34:48] 2024-05-19 17:34:37,142 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 19:34:48] 2024-05-19 17:34:37,142 | INFO     | will abort loop
[2024-05-19 19:34:48] 2024-05-19 17:34:37,636 | INFO     | all data control threads have been joined
[2024-05-19 19:34:48] 2024-05-19 17:34:38,028 | INFO     | [job] retrieve thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:38,120 | INFO     | [payload] failed_post thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:38,148 | INFO     | [job] job monitor thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:38,240 | INFO     | all job control threads have been joined
[2024-05-19 19:34:48] 2024-05-19 17:34:38,277 | INFO     | all payload control threads have been joined
[2024-05-19 19:34:48] 2024-05-19 17:34:38,454 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:38,642 | INFO     | [data] control thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:38,732 | INFO     | [payload] validate_post thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:38,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 19:34:48] 2024-05-19 17:34:38,975 | INFO     | [data] copytool_in thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:39,028 | INFO     | [data] copytool_out thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:39,173 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:39,246 | INFO     | [job] control thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:39,272 | INFO     | [job] validate thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:39,283 | INFO     | [payload] control thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:39,403 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:39,517 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:39,865 | INFO     | [job] queue monitor thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:41,029 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 19:34:48] 2024-05-19 17:34:42,994 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47819594130496)>', '<ExcThread(monitor, started 47820035856128)>']
[2024-05-19 19:34:48] 2024-05-19 17:34:43,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 19:34:48] 2024-05-19 17:34:43,049 | INFO     | [monitor] control thread has ended
[2024-05-19 19:34:48] 2024-05-19 17:34:48,020 | INFO     | all workflow threads have been joined
[2024-05-19 19:34:48] 2024-05-19 17:34:48,020 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 19:34:48] 2024-05-19 17:34:48,020 | INFO     | traces error code: 0
[2024-05-19 19:34:48] 2024-05-19 17:34:48,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 19:34:48] 2024-05-19 17:34:48,097 [wrapper] ==== pilot stdout END ====
[2024-05-19 19:34:48] 2024-05-19 17:34:48,100 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 19:34:48] 2024-05-19 17:34:48,104 [wrapper] pilotpid: 3534467
[2024-05-19 19:34:48] 2024-05-19 17:34:48,106 [wrapper] Pilot exit status: 0
[2024-05-19 19:34:48] 2024-05-19 17:34:48,115 [wrapper] pandaids: 6206857534
[2024-05-19 19:34:48] 2024-05-19 17:34:48,171 [wrapper] cleanup: SIGTERM to supervisor_pilot  147017 3534468
[2024-05-19 19:34:48] 2024-05-19 17:34:48,174 [wrapper] Test setup, not cleaning
[2024-05-19 19:34:48] 2024-05-19 17:34:48,176 [wrapper] ==== wrapper stdout END ====
[2024-05-19 19:34:48] 2024-05-19 17:34:48,179 [wrapper] ==== wrapper stderr END ====
[2024-05-19 19:34:48] 2024-05-19 17:34:48,185 [wrapper] apfmon messages muted
[2024-05-19 19:34:48]  *** Error codes and diagnostics ***
[2024-05-19 19:34:48]     "exeErrorCode": 0,
[2024-05-19 19:34:48]     "exeErrorDiag": "",
[2024-05-19 19:34:48]     "pilotErrorCode": 0,
[2024-05-19 19:34:48]     "pilotErrorDiag": "",
[2024-05-19 19:34:48]  *** Listing of results directory ***
[2024-05-19 19:34:48] total 921844
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc    467845 May 15 18:54 pilot3.tar.gz
[2024-05-19 19:34:48] -rwx------ 1 boinc boinc     32251 May 15 19:12 runpilot2-wrapper.sh
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc      5633 May 15 19:12 queuedata.json
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc       100 May 19 09:33 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 19:34:48] -rwxr-xr-x 1 boinc boinc      7986 May 19 09:33 run_atlas
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc       105 May 19 09:33 job.xml
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc      6457 May 19 10:21 init_data.xml
[2024-05-19 19:34:48] -rw-r--r-- 2 boinc boinc 584882920 May 19 10:21 EVNT.38776201._000042.pool.root.1
[2024-05-19 19:34:48] -rw-r--r-- 2 boinc boinc     17537 May 19 10:21 start_atlas.sh
[2024-05-19 19:34:48] drwxrwx--x 2 boinc boinc      4096 May 19 10:21 shared
[2024-05-19 19:34:48] -rw-r--r-- 2 boinc boinc    479996 May 19 10:21 input.tar.gz
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc         0 May 19 10:21 boinc_lockfile
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc      2627 May 19 10:21 pandaJob.out
[2024-05-19 19:34:48] -rw------- 1 boinc boinc       424 May 19 10:21 setup.sh.local
[2024-05-19 19:34:48] -rw------- 1 boinc boinc   1014045 May 19 10:21 agis_schedconf.cvmfs.json
[2024-05-19 19:34:48] -rw------- 1 boinc boinc   1324701 May 19 10:21 cric_ddmendpoints.json
[2024-05-19 19:34:48] drwx------ 4 boinc boinc      4096 May 19 10:21 pilot3
[2024-05-19 19:34:48] -rw------- 1 boinc boinc        95 May 19 19:33 pilot_heartbeat.json
[2024-05-19 19:34:48] -rw------- 1 boinc boinc 346541625 May 19 19:33 HITS.38921007._001034.pool.root.1
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc       533 May 19 19:33 boinc_task_state.xml
[2024-05-19 19:34:48] -rw------- 1 boinc boinc      1051 May 19 19:34 memory_monitor_summary.json
[2024-05-19 19:34:48] -rw------- 1 boinc boinc         0 May 19 19:34 agis_ddmendpoints.agis.ALL.json
[2024-05-19 19:34:48] -rw------- 1 boinc boinc    560151 May 19 19:34 log.38921007._001034.job.log.tgz.1
[2024-05-19 19:34:48] -rw------- 1 boinc boinc      7773 May 19 19:34 heartbeat.json
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc      8192 May 19 19:34 boinc_mmap_file
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc        29 May 19 19:34 wrapper_checkpoint.txt
[2024-05-19 19:34:48] -rw------- 1 boinc boinc      4531 May 19 19:34 pilotlog.txt
[2024-05-19 19:34:48] -rw------- 1 boinc boinc   3950968 May 19 19:34 log.38921007._001034.job.log.1
[2024-05-19 19:34:48] -rw------- 1 boinc boinc       357 May 19 19:34 output.list
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc       620 May 19 19:34 runtime_log
[2024-05-19 19:34:48] -rw------- 1 boinc boinc   4526080 May 19 19:34 result.tar.gz
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc     11410 May 19 19:34 runtime_log.err
[2024-05-19 19:34:48] -rw------- 1 boinc boinc       661 May 19 19:34 l5lNDmgMXR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmrcJKDmrJoVEn.diag
[2024-05-19 19:34:48] -rw-r--r-- 1 boinc boinc     21365 May 19 19:34 stderr.txt
[2024-05-19 19:34:48] HITS file was successfully produced:
[2024-05-19 19:34:48] -rw------- 1 boinc boinc 346541625 May 19 19:33 shared/HITS.pool.root.1
[2024-05-19 19:34:48]  *** Contents of shared directory: ***
[2024-05-19 19:34:48] total 914516
[2024-05-19 19:34:48] -rw-r--r-- 2 boinc boinc 584882920 May 19 10:21 ATLAS.root_0
[2024-05-19 19:34:48] -rw-r--r-- 2 boinc boinc     17537 May 19 10:21 start_atlas.sh
[2024-05-19 19:34:48] -rw-r--r-- 2 boinc boinc    479996 May 19 10:21 input.tar.gz
[2024-05-19 19:34:48] -rw------- 1 boinc boinc 346541625 May 19 19:33 HITS.pool.root.1
[2024-05-19 19:34:48] -rw------- 1 boinc boinc   4526080 May 19 19:34 result.tar.gz
19:34:49 (3529924): run_atlas exited; CPU time 128820.474924
19:34:49 (3529924): called boinc_finish(0)

</stderr_txt>
]]>

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