Stderr output

<core_client_version>8.0.0</core_client_version>
<![CDATA[
<stderr_txt>
23:39:10 (50380): wrapper (7.15.26016): starting
23:39:10 (50380): wrapper (7.15.26016): starting
23:39:10 (50380): wrapper: running run_atlas (--nthreads 2)
[2024-05-15 23:39:11] Arguments: --nthreads 2
[2024-05-15 23:39:11] Threads: 2
[2024-05-15 23:39:11] Checking for CVMFS
[2024-05-15 23:39:11] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 23:39:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 23:39:11] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 23:39:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 23:39:11] 2.11.3.0 4091 1989 56608 132775 1 56 3597672 6291457 2715 130560 0 4779307 99.996 399469 5741 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://203.0.113.247:7028 1
[2024-05-15 23:39:11] CVMFS is ok
[2024-05-15 23:39:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 23:39:11] Checking for apptainer binary...
[2024-05-15 23:39:11] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 23:39:11] Running /usr/bin/apptainer --version
[2024-05-15 23:39:11] apptainer version 1.3.0-1.2
[2024-05-15 23:39:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 23:39:11] s4
[2024-05-15 23:39:11] apptainer works
[2024-05-15 23:39:11] Set ATHENA_PROC_NUMBER=2
[2024-05-15 23:39:11] Set ATHENA_CORE_NUMBER=2
[2024-05-15 23:39:12] Starting ATLAS job with PandaID=6206857343
[2024-05-15 23:39:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc4/BOINC_ATLAS/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 23:39:12] Starting apptainer container.
[2024-05-15 23:39:12] To get some details on systemd level run
[2024-05-15 23:39:12] systemctl status ATLAS_boinc4_1_BbPODmDLXR5nsSi4apGgGQJmABFKDmABFKDm4ySLDm5aOKDmgiZhbm_0.scope
[2024-05-15 23:39:12] ----,^^^^,<<<~_____---,^^^,<<~____--,^^,<~__;_
[2024-05-16 18:09:38] Container ATLAS_boinc4_1_BbPODmDLXR5nsSi4apGgGQJmABFKDmABFKDm4ySLDm5aOKDmgiZhbm_0 finished with status code 0.
[2024-05-16 18:09:38]  *** The last 200 lines of the pilot log: ***
[2024-05-16 18:09:38] 2024-05-16 16:09:21,833 | INFO     | fitting pss+swap vs Time
[2024-05-16 18:09:38] 2024-05-16 16:09:21,835 | INFO     | model: linear, x: [1715809198.0, 1715809259.0, 1715809320.0, 1715809381.0, 1715809442.0, 1715809503.0, 1715809564.0, 1715809625.0, 1715809686.0, 1715809747.0, 1715
[2024-05-16 18:09:38] 2024-05-16 16:09:21,835 | INFO     | sum of square deviations: 402672815090.0
[2024-05-16 18:09:38] 2024-05-16 16:09:21,860 | INFO     | sum of deviations: 125364337513.99997
[2024-05-16 18:09:38] 2024-05-16 16:09:21,861 | INFO     | mean x: 1715842443.0
[2024-05-16 18:09:38] 2024-05-16 16:09:21,861 | INFO     | mean y: 2298823.9110907423
[2024-05-16 18:09:38] 2024-05-16 16:09:21,861 | INFO     | -- intersect: -531895298.6720809
[2024-05-16 18:09:38] 2024-05-16 16:09:21,861 | INFO     | intersect: -531895298.6720809
[2024-05-16 18:09:38] 2024-05-16 16:09:21,862 | INFO     | chi2: 2.7905803643030667
[2024-05-16 18:09:38] 2024-05-16 16:09:21,863 | INFO     | model: linear, x: [1715809198.0, 1715809259.0, 1715809320.0, 1715809381.0, 1715809442.0, 1715809503.0, 1715809564.0, 1715809625.0, 1715809686.0, 1715809747.0, 1715
[2024-05-16 18:09:38] 2024-05-16 16:09:21,864 | INFO     | sum of square deviations: 397161855947.5
[2024-05-16 18:09:38] 2024-05-16 16:09:21,885 | INFO     | sum of deviations: 189961125135.50003
[2024-05-16 18:09:38] 2024-05-16 16:09:21,885 | INFO     | mean x: 1715842290.5
[2024-05-16 18:09:38] 2024-05-16 16:09:21,885 | INFO     | mean y: 2300604.6602209946
[2024-05-16 18:09:38] 2024-05-16 16:09:21,885 | INFO     | -- intersect: -818380755.2877476
[2024-05-16 18:09:38] 2024-05-16 16:09:21,885 | INFO     | intersect: -818380755.2877476
[2024-05-16 18:09:38] 2024-05-16 16:09:21,886 | INFO     | chi2: 2.0388279765672173
[2024-05-16 18:09:38] 2024-05-16 16:09:21,886 | INFO     | current chi2=2.0388279765672173 (change=26.93892630193418 %)
[2024-05-16 18:09:38] 2024-05-16 16:09:21,887 | INFO     | model: linear, x: [1715809198.0, 1715809259.0, 1715809320.0, 1715809381.0, 1715809442.0, 1715809503.0, 1715809564.0, 1715809625.0, 1715809686.0, 1715809747.0, 1715
[2024-05-16 18:09:38] 2024-05-16 16:09:21,888 | INFO     | sum of square deviations: 391701409380.0
[2024-05-16 18:09:38] 2024-05-16 16:09:21,914 | INFO     | sum of deviations: 187763983733.99994
[2024-05-16 18:09:38] 2024-05-16 16:09:21,915 | INFO     | mean x: 1715842138.0
[2024-05-16 18:09:38] 2024-05-16 16:09:21,915 | INFO     | mean y: 2300543.308973173
[2024-05-16 18:09:38] 2024-05-16 16:09:21,915 | INFO     | -- intersect: -820196766.0560659
[2024-05-16 18:09:38] 2024-05-16 16:09:21,915 | INFO     | intersect: -820196766.0560659
[2024-05-16 18:09:38] 2024-05-16 16:09:21,916 | INFO     | chi2: 2.038861279210595
[2024-05-16 18:09:38] 2024-05-16 16:09:21,916 | INFO     | current chi2=2.038861279210595 (change=-0.001633420953626189 %)
[2024-05-16 18:09:38] 2024-05-16 16:09:21,916 | INFO     | right removable region: 1080
[2024-05-16 18:09:38] 2024-05-16 16:09:21,917 | INFO     | model: linear, x: [1715809503.0, 1715809564.0, 1715809625.0, 1715809686.0, 1715809747.0, 1715809808.0, 1715809869.0, 1715809930.0, 1715809991.0, 1715810052.0, 1715
[2024-05-16 18:09:38] 2024-05-16 16:09:21,918 | INFO     | sum of square deviations: 397161855947.5
[2024-05-16 18:09:38] 2024-05-16 16:09:21,943 | INFO     | sum of deviations: -72756366215.00005
[2024-05-16 18:09:38] 2024-05-16 16:09:21,943 | INFO     | mean x: 1715842595.5
[2024-05-16 18:09:38] 2024-05-16 16:09:21,943 | INFO     | mean y: 2304300.9318600367
[2024-05-16 18:09:38] 2024-05-16 16:09:21,943 | INFO     | -- intersect: 316630740.8354854
[2024-05-16 18:09:38] 2024-05-16 16:09:21,943 | INFO     | intersect: 316630740.8354854
[2024-05-16 18:09:38] 2024-05-16 16:09:21,944 | INFO     | chi2: 1.1363200624322134
[2024-05-16 18:09:38] 2024-05-16 16:09:21,945 | INFO     | current chi2=1.1363200624322134 (change=59.28015272493313 %)
[2024-05-16 18:09:38] 2024-05-16 16:09:21,946 | INFO     | model: linear, x: [1715809808.0, 1715809869.0, 1715809930.0, 1715809991.0, 1715810052.0, 1715810113.0, 1715810174.0, 1715810235.0, 1715810296.0, 1715810357.0, 1715
[2024-05-16 18:09:38] 2024-05-16 16:09:21,946 | INFO     | sum of square deviations: 391701409380.0
[2024-05-16 18:09:38] 2024-05-16 16:09:21,971 | INFO     | sum of deviations: -37453681397.000015
[2024-05-16 18:09:38] 2024-05-16 16:09:21,971 | INFO     | mean x: 1715842748.0
[2024-05-16 18:09:38] 2024-05-16 16:09:21,971 | INFO     | mean y: 2303313.9629972246
[2024-05-16 18:09:38] 2024-05-16 16:09:21,971 | INFO     | -- intersect: 166368660.8624774
[2024-05-16 18:09:38] 2024-05-16 16:09:21,972 | INFO     | intersect: 166368660.8624774
[2024-05-16 18:09:38] 2024-05-16 16:09:21,973 | INFO     | chi2: 1.0817885634377977
[2024-05-16 18:09:38] 2024-05-16 16:09:21,973 | INFO     | current chi2=1.0817885634377977 (change=4.798955927759898 %)
[2024-05-16 18:09:38] 2024-05-16 16:09:21,973 | INFO     | left removable region: 20
[2024-05-16 18:09:38] 2024-05-16 16:09:21,974 | INFO     | model: linear, x: [1715810418.0, 1715810479.0, 1715810540.0, 1715810601.0, 1715810662.0, 1715810723.0, 1715810784.0, 1715810845.0, 1715810906.0, 1715810967.0, 1715
[2024-05-16 18:09:38] 2024-05-16 16:09:21,974 | INFO     | sum of square deviations: 369313882645.0
[2024-05-16 18:09:38] 2024-05-16 16:09:21,998 | INFO     | sum of deviations: 131566052482.5
[2024-05-16 18:09:38] 2024-05-16 16:09:21,998 | INFO     | mean x: 1715842717.5
[2024-05-16 18:09:38] 2024-05-16 16:09:21,998 | INFO     | mean y: 2302022.808490566
[2024-05-16 18:09:38] 2024-05-16 16:09:21,998 | INFO     | -- intersect: -608957568.641305
[2024-05-16 18:09:38] 2024-05-16 16:09:21,998 | INFO     | intersect: -608957568.641305
[2024-05-16 18:09:38] 2024-05-16 16:09:21,999 | INFO     | chi2: 0.1159322936072844
[2024-05-16 18:09:38] 2024-05-16 16:09:22,000 | INFO     | -- intersect: -608957568.641305
[2024-05-16 18:09:38] 2024-05-16 16:09:22,000 | INFO     | current memory leak: 0.36 B/s (using 1060 data points, chi2=0.12)
[2024-05-16 18:09:38] 2024-05-16 16:09:22,001 | INFO     | ..............................
[2024-05-16 18:09:38] 2024-05-16 16:09:22,001 | INFO     | . Timing measurements:
[2024-05-16 18:09:38] 2024-05-16 16:09:22,001 | INFO     | . get job = 0 s
[2024-05-16 18:09:38] 2024-05-16 16:09:22,001 | INFO     | . initial setup = 1 s
[2024-05-16 18:09:38] 2024-05-16 16:09:22,001 | INFO     | . payload setup = 6 s
[2024-05-16 18:09:38] 2024-05-16 16:09:22,001 | INFO     | . stage-in = 0 s
[2024-05-16 18:09:38] 2024-05-16 16:09:22,001 | INFO     | . payload execution = 66539 s
[2024-05-16 18:09:38] 2024-05-16 16:09:22,002 | INFO     | . stage-out = 1 s
[2024-05-16 18:09:38] 2024-05-16 16:09:22,002 | INFO     | . log creation = 0 s
[2024-05-16 18:09:38] 2024-05-16 16:09:22,002 | INFO     | ..............................
[2024-05-16 18:09:38] 2024-05-16 16:09:22,111 | INFO     | 
[2024-05-16 18:09:38] 2024-05-16 16:09:22,118 | INFO     | job summary report
[2024-05-16 18:09:38] 2024-05-16 16:09:22,118 | INFO     | --------------------------------------------------
[2024-05-16 18:09:38] 2024-05-16 16:09:22,118 | INFO     | PanDA job id: 6206857343
[2024-05-16 18:09:38] 2024-05-16 16:09:22,118 | INFO     | task id: 38921007
[2024-05-16 18:09:38] 2024-05-16 16:09:22,118 | INFO     | errors: (none)
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | pilot state: finished 
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | transexitcode: 0
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | exeerrorcode: 0
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | exeerrordiag: 
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | exitcode: 0
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | exitmsg: OK
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | cpuconsumptiontime: 125609 s
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | nevents: 400
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | neventsw: 0
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | pid: 64863
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | pgrp: 64863
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | corecount: 2
[2024-05-16 18:09:38] 2024-05-16 16:09:22,119 | INFO     | event service: False
[2024-05-16 18:09:38] 2024-05-16 16:09:22,120 | INFO     | sizes: {0: 2392197, 1: 2392197, 5: 2392431, 11: 2392487, 66550: 2446538, 66553: 2455518, 66555: 2455702, 66578: 2455872}
[2024-05-16 18:09:38] 2024-05-16 16:09:22,120 | INFO     | --------------------------------------------------
[2024-05-16 18:09:38] 2024-05-16 16:09:22,120 | INFO     | 
[2024-05-16 18:09:38] 2024-05-16 16:09:22,120 | INFO     | executing command: ls -lF /home/boinc4/BOINC_ATLAS/slots/1
[2024-05-16 18:09:38] 2024-05-16 16:09:22,192 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,192 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,192 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,192 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,192 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,192 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 18:09:38] 2024-05-16 16:09:22,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,194 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 18:09:38] 2024-05-16 16:09:22,194 | INFO     | job 6206857343 has completed (purged errors)
[2024-05-16 18:09:38] 2024-05-16 16:09:22,194 | INFO     | overall cleanup function is called
[2024-05-16 18:09:38] 2024-05-16 16:09:23,208 | INFO     | --- collectZombieJob: --- 10, [64863]
[2024-05-16 18:09:38] 2024-05-16 16:09:23,208 | INFO     | zombie collector waiting for pid 64863
[2024-05-16 18:09:38] 2024-05-16 16:09:23,208 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 18:09:38] 2024-05-16 16:09:24,215 | INFO     | collected zombie processes
[2024-05-16 18:09:38] 2024-05-16 16:09:24,215 | INFO     | will now attempt to kill all subprocesses of pid=64863
[2024-05-16 18:09:38] 2024-05-16 16:09:24,469 | INFO     | process IDs to be killed: [64863] (in reverse order)
[2024-05-16 18:09:38] 2024-05-16 16:09:24,639 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 18:09:38] 2024-05-16 16:09:24,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 18:09:38] 2024-05-16 16:09:24,648 | INFO     | did not find any defunct processes belonging to 64863
[2024-05-16 18:09:38] 2024-05-16 16:09:24,664 | INFO     | did not find any defunct processes belonging to 64863
[2024-05-16 18:09:38] 2024-05-16 16:09:24,664 | INFO     | ready for new job
[2024-05-16 18:09:38] 2024-05-16 16:09:24,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 18:09:38] 2024-05-16 16:09:24,675 | INFO     | *************************************
[2024-05-16 18:09:38] 2024-05-16 16:09:24,676 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 18:09:38] 2024-05-16 16:09:24,676 | INFO     | *************************************
[2024-05-16 18:09:38] 2024-05-16 16:09:24,676 | INFO     | 
[2024-05-16 18:09:38] 2024-05-16 16:09:24,678 | INFO     | architecture information:
[2024-05-16 18:09:38] 2024-05-16 16:09:24,688 | INFO     | executing command: cat /etc/os-release
[2024-05-16 18:09:38] 2024-05-16 16:09:24,758 | INFO     | cat /etc/os-release:
[2024-05-16 18:09:38] NAME="CentOS Linux"
[2024-05-16 18:09:38] VERSION="7 (Core)"
[2024-05-16 18:09:38] ID="centos"
[2024-05-16 18:09:38] ID_LIKE="rhel fedora"
[2024-05-16 18:09:38] VERSION_ID="7"
[2024-05-16 18:09:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 18:09:38] ANSI_COLOR="0;31"
[2024-05-16 18:09:38] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 18:09:38] HOME_URL="https://www.centos.org/"
[2024-05-16 18:09:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 18:09:38] 
[2024-05-16 18:09:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 18:09:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 18:09:38] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 18:09:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 18:09:38] 
[2024-05-16 18:09:38] 2024-05-16 16:09:24,759 | INFO     | *************************************
[2024-05-16 18:09:38] 2024-05-16 16:09:25,265 | INFO     | executing command: df -mP /home/boinc4/BOINC_ATLAS/slots/1
[2024-05-16 18:09:38] 2024-05-16 16:09:25,335 | INFO     | sufficient remaining disk space (101338578944 B)
[2024-05-16 18:09:38] 2024-05-16 16:09:25,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 18:09:38] 2024-05-16 16:09:25,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 18:09:38] 2024-05-16 16:09:25,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 18:09:38] 2024-05-16 16:09:25,338 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 18:09:38] 2024-05-16 16:09:25,338 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 18:09:38] 2024-05-16 16:09:25,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 18:09:38] 2024-05-16 16:09:25,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 18:09:38] 2024-05-16 16:09:25,641 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-16 18:09:38] 2024-05-16 16:09:25,642 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-16 18:09:38] 2024-05-16 16:09:25,642 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 18:09:38] 2024-05-16 16:09:25,642 | INFO     | will abort loop
[2024-05-16 18:09:38] 2024-05-16 16:09:26,078 | INFO     | all payload control threads have been joined
[2024-05-16 18:09:38] 2024-05-16 16:09:26,308 | INFO     | all data control threads have been joined
[2024-05-16 18:09:38] 2024-05-16 16:09:26,342 | INFO     | [job] retrieve thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:26,428 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:26,585 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:26,648 | INFO     | [job] job monitor thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:26,748 | INFO     | [payload] failed_post thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:26,782 | INFO     | [data] copytool_in thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:26,935 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:27,031 | INFO     | all job control threads have been joined
[2024-05-16 18:09:38] 2024-05-16 16:09:27,085 | INFO     | [payload] control thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:27,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 18:09:38] 2024-05-16 16:09:27,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 18:09:38] 2024-05-16 16:09:27,132 | INFO     | [job] validate thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:27,262 | INFO     | [payload] validate_post thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:27,315 | INFO     | [data] control thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:27,345 | INFO     | [data] copytool_out thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:27,808 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:28,036 | INFO     | [job] control thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:28,138 | INFO     | [job] queue monitor thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:31,105 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 18:09:38] 2024-05-16 16:09:32,528 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699588568896)>', '<ExcThread(monitor, started 139699234539264)>']
[2024-05-16 18:09:38] 2024-05-16 16:09:33,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 18:09:38] 2024-05-16 16:09:33,395 | INFO     | [monitor] control thread has ended
[2024-05-16 18:09:38] 2024-05-16 16:09:37,555 | INFO     | all workflow threads have been joined
[2024-05-16 18:09:38] 2024-05-16 16:09:37,555 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 18:09:38] 2024-05-16 16:09:37,555 | INFO     | traces error code: 0
[2024-05-16 18:09:38] 2024-05-16 16:09:37,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 18:09:38] 2024-05-16 16:09:37,698 [wrapper] ==== pilot stdout END ====
[2024-05-16 18:09:38] 2024-05-16 16:09:37,716 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 18:09:38] 2024-05-16 16:09:37,748 [wrapper] pilotpid: 54925
[2024-05-16 18:09:38] 2024-05-16 16:09:37,775 [wrapper] Pilot exit status: 0
[2024-05-16 18:09:38] 2024-05-16 16:09:37,883 [wrapper] pandaids: 6206857343
[2024-05-16 18:09:38] 2024-05-16 16:09:38,092 [wrapper] cleanup: SIGTERM to supervisor_pilot  42913 54926
[2024-05-16 18:09:38] 2024-05-16 16:09:38,115 [wrapper] Test setup, not cleaning
[2024-05-16 18:09:38] 2024-05-16 16:09:38,155 [wrapper] ==== wrapper stdout END ====
[2024-05-16 18:09:38] 2024-05-16 16:09:38,202 [wrapper] ==== wrapper stderr END ====
[2024-05-16 18:09:38] 2024-05-16 16:09:38,288 [wrapper] apfmon messages muted
[2024-05-16 18:09:38]  *** Error codes and diagnostics ***
[2024-05-16 18:09:38]     "exeErrorCode": 0,
[2024-05-16 18:09:38]     "exeErrorDiag": "",
[2024-05-16 18:09:38]     "pilotErrorCode": 0,
[2024-05-16 18:09:38]     "pilotErrorDiag": "",
[2024-05-16 18:09:38]  *** Listing of results directory ***
[2024-05-16 18:09:38] total 938768
[2024-05-16 18:09:38] -rw-r--r-- 1 boinc4 boinc    467845 May 15 18:54 pilot3.tar.gz
[2024-05-16 18:09:38] -rw-r--r-- 1 boinc4 boinc      5633 May 15 19:10 queuedata.json
[2024-05-16 18:09:38] -rwx------ 1 boinc4 boinc     32251 May 15 19:11 runpilot2-wrapper.sh
[2024-05-16 18:09:38] -rw-r--r-- 1 boinc4 boinc       100 May 15 23:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 18:09:38] -rwxr-xr-x 1 boinc4 boinc      9842 May 15 23:39 run_atlas
[2024-05-16 18:09:38] -rw-r--r-- 1 boinc4 boinc       105 May 15 23:39 job.xml
[2024-05-16 18:09:38] -rw-r--r-- 2 boinc4 boinc 585428880 May 15 23:39 EVNT.38776201._000041.pool.root.1
[2024-05-16 18:09:38] -rw-r--r-- 2 boinc4 boinc     17537 May 15 23:39 start_atlas.sh
[2024-05-16 18:09:38] drwxrwx--x 2 boinc4 boinc       100 May 15 23:39 shared
[2024-05-16 18:09:38] -rw-r--r-- 2 boinc4 boinc    480001 May 15 23:39 input.tar.gz
[2024-05-16 18:09:38] -rw-r--r-- 1 boinc4 boinc      6691 May 15 23:39 init_data.xml
[2024-05-16 18:09:38] -rw-r--r-- 1 boinc4 boinc      8192 May 15 23:39 boinc_mmap_file
[2024-05-16 18:09:38] -rw-r--r-- 1 boinc4 boinc         0 May 15 23:39 boinc_lockfile
[2024-05-16 18:09:38] -rw-r--r-- 1 boinc4 boinc      2627 May 15 23:39 pandaJob.out
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc       452 May 15 23:39 setup.sh.local
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc   1011331 May 15 23:39 agis_schedconf.cvmfs.json
[2024-05-16 18:09:38] drwx------ 4 boinc4 boinc       400 May 15 23:39 pilot3
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc 353252826 May 16 18:07 HITS.38921007._001013.pool.root.1
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc      1022 May 16 18:08 memory_monitor_summary.json
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc        95 May 16 18:08 pilot_heartbeat.json
[2024-05-16 18:09:38] -rw-r--r-- 1 boinc4 boinc         0 May 16 18:08 agis_ddmendpoints.agis.ALL.json
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc   1324701 May 16 18:08 cric_ddmendpoints.json
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc    920238 May 16 18:08 log.38921007._001013.job.log.tgz.1
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc      7651 May 16 18:09 heartbeat.json
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc      4531 May 16 18:09 pilotlog.txt
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc   8638761 May 16 18:09 log.38921007._001013.job.log.1
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc       357 May 16 18:09 output.list
[2024-05-16 18:09:38] -rw-r--r-- 1 boinc4 boinc       620 May 16 18:09 runtime_log
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc   9574400 May 16 18:09 result.tar.gz
[2024-05-16 18:09:38] -rw-r--r-- 1 boinc4 boinc     11451 May 16 18:09 runtime_log.err
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc       635 May 16 18:09 BbPODmDLXR5nsSi4apGgGQJmABFKDmABFKDm4ySLDm5aOKDmgiZhbm.diag
[2024-05-16 18:09:38] -rw-r--r-- 1 boinc4 boinc     21777 May 16 18:09 stderr.txt
[2024-05-16 18:09:38] HITS file was successfully produced:
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc 353252826 May 16 18:07 shared/HITS.pool.root.1
[2024-05-16 18:09:38]  *** Contents of shared directory: ***
[2024-05-16 18:09:38] total 926528
[2024-05-16 18:09:38] -rw-r--r-- 2 boinc4 boinc 585428880 May 15 23:39 ATLAS.root_0
[2024-05-16 18:09:38] -rw-r--r-- 2 boinc4 boinc     17537 May 15 23:39 start_atlas.sh
[2024-05-16 18:09:38] -rw-r--r-- 2 boinc4 boinc    480001 May 15 23:39 input.tar.gz
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc 353252826 May 16 18:07 HITS.pool.root.1
[2024-05-16 18:09:38] -rw------- 1 boinc4 boinc   9574400 May 16 18:09 result.tar.gz
18:09:40 (50380): run_atlas exited; CPU time 125255.673879
18:09:40 (50380): called boinc_finish(0)

</stderr_txt>
]]>

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