Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:43:19 (3953801): wrapper (7.7.26015): starting
05:43:19 (3953801): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 05:43:19] Arguments: --nthreads 4
[2024-05-18 05:43:19] Threads: 4
[2024-05-18 05:43:19] Checking for CVMFS
[2024-05-18 05:43:19] No cvmfs_config command found, will try listing directly
[2024-05-18 05:43:19] CVMFS is ok
[2024-05-18 05:43:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 05:43:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 05:43:19] Further information can be found at the LHC@home message board.
[2024-05-18 05:43:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 05:43:19] Checking for apptainer binary...
[2024-05-18 05:43:19] which: no apptainer in ((null))
[2024-05-18 05:43:19] apptainer is not installed, using version from CVMFS
[2024-05-18 05:43:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 05:43:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-05-18 05:43:20] apptainer works
[2024-05-18 05:43:20] Set ATHENA_PROC_NUMBER=4
[2024-05-18 05:43:20] Set ATHENA_CORE_NUMBER=4
[2024-05-18 05:43:20] Starting ATLAS job with PandaID=6206856858
[2024-05-18 05:43:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 12:01:03]  *** The last 200 lines of the pilot log: ***
[2024-05-18 12:01:03] 2024-05-18 10:00:46,610 | WARNING  | GPU info not found in prmon json
[2024-05-18 12:01:03] 2024-05-18 10:00:46,611 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 12:01:03] 2024-05-18 10:00:46,611 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 12:01:03] 2024-05-18 10:00:46,615 | INFO     | fitting pss+swap vs Time
[2024-05-18 12:01:03] 2024-05-18 10:00:46,616 | INFO     | model: linear, x: [1716003834.0, 1716003895.0, 1716003956.0, 1716004017.0, 1716004078.0, 1716004139.0, 1716004200.0, 1716004261.0, 1716004322.0, 1716004383.0, 1716
[2024-05-18 12:01:03] 2024-05-18 10:00:46,616 | INFO     | sum of square deviations: 15834231770.0
[2024-05-18 12:01:03] 2024-05-18 10:00:46,618 | INFO     | sum of deviations: 156708192665.0
[2024-05-18 12:01:03] 2024-05-18 10:00:46,618 | INFO     | mean x: 1716015119.0
[2024-05-18 12:01:03] 2024-05-18 10:00:46,618 | INFO     | mean y: 2318567.369272237
[2024-05-18 12:01:03] 2024-05-18 10:00:46,618 | INFO     | -- intersect: -16980736360.10732
[2024-05-18 12:01:03] 2024-05-18 10:00:46,618 | INFO     | intersect: -16980736360.10732
[2024-05-18 12:01:03] 2024-05-18 10:00:46,618 | INFO     | chi2: 4.631550347070978
[2024-05-18 12:01:03] 2024-05-18 10:00:46,619 | INFO     | model: linear, x: [1716003834.0, 1716003895.0, 1716003956.0, 1716004017.0, 1716004078.0, 1716004139.0, 1716004200.0, 1716004261.0, 1716004322.0, 1716004383.0, 1716
[2024-05-18 12:01:03] 2024-05-18 10:00:46,619 | INFO     | sum of square deviations: 15202619927.5
[2024-05-18 12:01:03] 2024-05-18 10:00:46,621 | INFO     | sum of deviations: 177248386677.0
[2024-05-18 12:01:03] 2024-05-18 10:00:46,621 | INFO     | mean x: 1716014966.5
[2024-05-18 12:01:03] 2024-05-18 10:00:46,621 | INFO     | mean y: 2323465.7158469944
[2024-05-18 12:01:03] 2024-05-18 10:00:46,621 | INFO     | -- intersect: -20004812526.38476
[2024-05-18 12:01:03] 2024-05-18 10:00:46,621 | INFO     | intersect: -20004812526.38476
[2024-05-18 12:01:03] 2024-05-18 10:00:46,621 | INFO     | chi2: 3.8826056679659464
[2024-05-18 12:01:03] 2024-05-18 10:00:46,621 | INFO     | current chi2=3.8826056679659464 (change=16.170496334530167 %)
[2024-05-18 12:01:03] 2024-05-18 10:00:46,621 | INFO     | right removable region: 365
[2024-05-18 12:01:03] 2024-05-18 10:00:46,622 | INFO     | model: linear, x: [1716004139.0, 1716004200.0, 1716004261.0, 1716004322.0, 1716004383.0, 1716004444.0, 1716004505.0, 1716004566.0, 1716004627.0, 1716004688.0, 1716
[2024-05-18 12:01:03] 2024-05-18 10:00:46,622 | INFO     | sum of square deviations: 15202619927.5
[2024-05-18 12:01:03] 2024-05-18 10:00:46,624 | INFO     | sum of deviations: 71201569423.0
[2024-05-18 12:01:03] 2024-05-18 10:00:46,624 | INFO     | mean x: 1716015271.5
[2024-05-18 12:01:03] 2024-05-18 10:00:46,624 | INFO     | mean y: 2339178.4098360655
[2024-05-18 12:01:03] 2024-05-18 10:00:46,624 | INFO     | -- intersect: -8034629519.572201
[2024-05-18 12:01:03] 2024-05-18 10:00:46,624 | INFO     | intersect: -8034629519.572201
[2024-05-18 12:01:03] 2024-05-18 10:00:46,624 | INFO     | chi2: 2.2764160241928275
[2024-05-18 12:01:03] 2024-05-18 10:00:46,624 | INFO     | current chi2=2.2764160241928275 (change=50.849805062953756 %)
[2024-05-18 12:01:03] 2024-05-18 10:00:46,624 | INFO     | model: linear, x: [1716004444.0, 1716004505.0, 1716004566.0, 1716004627.0, 1716004688.0, 1716004749.0, 1716004810.0, 1716004871.0, 1716004932.0, 1716004993.0, 1716
[2024-05-18 12:01:03] 2024-05-18 10:00:46,625 | INFO     | sum of square deviations: 14588031660.0
[2024-05-18 12:01:03] 2024-05-18 10:00:46,627 | INFO     | sum of deviations: 1424823786.9999962
[2024-05-18 12:01:03] 2024-05-18 10:00:46,627 | INFO     | mean x: 1716015424.0
[2024-05-18 12:01:03] 2024-05-18 10:00:46,627 | INFO     | mean y: 2356494.1994459834
[2024-05-18 12:01:03] 2024-05-18 10:00:46,627 | INFO     | -- intersect: -165247995.01195762
[2024-05-18 12:01:03] 2024-05-18 10:00:46,627 | INFO     | intersect: -165247995.01195762
[2024-05-18 12:01:03] 2024-05-18 10:00:46,627 | INFO     | chi2: 0.846183238783027
[2024-05-18 12:01:03] 2024-05-18 10:00:46,627 | INFO     | current chi2=0.846183238783027 (change=62.828269095361556 %)
[2024-05-18 12:01:03] 2024-05-18 10:00:46,627 | INFO     | model: linear, x: [1716004749.0, 1716004810.0, 1716004871.0, 1716004932.0, 1716004993.0, 1716005054.0, 1716005115.0, 1716005176.0, 1716005237.0, 1716005298.0, 1716
[2024-05-18 12:01:03] 2024-05-18 10:00:46,628 | INFO     | sum of square deviations: 13990234405.0
[2024-05-18 12:01:03] 2024-05-18 10:00:46,629 | INFO     | sum of deviations: -9800079074.000002
[2024-05-18 12:01:03] 2024-05-18 10:00:46,629 | INFO     | mean x: 1716015576.5
[2024-05-18 12:01:03] 2024-05-18 10:00:46,629 | INFO     | mean y: 2359347.7808988765
[2024-05-18 12:01:03] 2024-05-18 10:00:46,629 | INFO     | -- intersect: 1204418430.9300277
[2024-05-18 12:01:03] 2024-05-18 10:00:46,629 | INFO     | intersect: 1204418430.9300277
[2024-05-18 12:01:03] 2024-05-18 10:00:46,630 | INFO     | chi2: 0.7960938683870135
[2024-05-18 12:01:03] 2024-05-18 10:00:46,630 | INFO     | current chi2=0.7960938683870135 (change=5.919447242662434 %)
[2024-05-18 12:01:03] 2024-05-18 10:00:46,630 | INFO     | left removable region: 30
[2024-05-18 12:01:03] 2024-05-18 10:00:46,630 | INFO     | model: linear, x: [1716005664.0, 1716005725.0, 1716005786.0, 1716005847.0, 1716005908.0, 1716005969.0, 1716006030.0, 1716006091.0, 1716006152.0, 1716006213.0, 1716
[2024-05-18 12:01:03] 2024-05-18 10:00:46,630 | INFO     | sum of square deviations: 11657595320.0
[2024-05-18 12:01:03] 2024-05-18 10:00:46,632 | INFO     | sum of deviations: 21550690854.000004
[2024-05-18 12:01:03] 2024-05-18 10:00:46,632 | INFO     | mean x: 1716015851.0
[2024-05-18 12:01:03] 2024-05-18 10:00:46,632 | INFO     | mean y: 2362300.576119403
[2024-05-18 12:01:03] 2024-05-18 10:00:46,632 | INFO     | -- intersect: -3169932335.695809
[2024-05-18 12:01:03] 2024-05-18 10:00:46,632 | INFO     | intersect: -3169932335.695809
[2024-05-18 12:01:03] 2024-05-18 10:00:46,632 | INFO     | chi2: 0.003928643514603761
[2024-05-18 12:01:03] 2024-05-18 10:00:46,632 | INFO     | -- intersect: -3169932335.695809
[2024-05-18 12:01:03] 2024-05-18 10:00:46,632 | INFO     | current memory leak: 1.85 B/s (using 335 data points, chi2=0.00)
[2024-05-18 12:01:03] 2024-05-18 10:00:46,633 | INFO     | ..............................
[2024-05-18 12:01:03] 2024-05-18 10:00:46,633 | INFO     | . Timing measurements:
[2024-05-18 12:01:03] 2024-05-18 10:00:46,633 | INFO     | . get job = 0 s
[2024-05-18 12:01:03] 2024-05-18 10:00:46,633 | INFO     | . initial setup = 1 s
[2024-05-18 12:01:03] 2024-05-18 10:00:46,633 | INFO     | . payload setup = 5 s
[2024-05-18 12:01:03] 2024-05-18 10:00:46,633 | INFO     | . stage-in = 0 s
[2024-05-18 12:01:03] 2024-05-18 10:00:46,633 | INFO     | . payload execution = 22600 s
[2024-05-18 12:01:03] 2024-05-18 10:00:46,633 | INFO     | . stage-out = 1 s
[2024-05-18 12:01:03] 2024-05-18 10:00:46,633 | INFO     | . log creation = 0 s
[2024-05-18 12:01:03] 2024-05-18 10:00:46,633 | INFO     | ..............................
[2024-05-18 12:01:03] 2024-05-18 10:00:47,170 | INFO     | 
[2024-05-18 12:01:03] 2024-05-18 10:00:47,170 | INFO     | job summary report
[2024-05-18 12:01:03] 2024-05-18 10:00:47,171 | INFO     | --------------------------------------------------
[2024-05-18 12:01:03] 2024-05-18 10:00:47,171 | INFO     | PanDA job id: 6206856858
[2024-05-18 12:01:03] 2024-05-18 10:00:47,171 | INFO     | task id: 38921007
[2024-05-18 12:01:03] 2024-05-18 10:00:47,171 | INFO     | errors: (none)
[2024-05-18 12:01:03] 2024-05-18 10:00:47,171 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 12:01:03] 2024-05-18 10:00:47,171 | INFO     | pilot state: finished 
[2024-05-18 12:01:03] 2024-05-18 10:00:47,171 | INFO     | transexitcode: 0
[2024-05-18 12:01:03] 2024-05-18 10:00:47,171 | INFO     | exeerrorcode: 0
[2024-05-18 12:01:03] 2024-05-18 10:00:47,172 | INFO     | exeerrordiag: 
[2024-05-18 12:01:03] 2024-05-18 10:00:47,172 | INFO     | exitcode: 0
[2024-05-18 12:01:03] 2024-05-18 10:00:47,172 | INFO     | exitmsg: OK
[2024-05-18 12:01:03] 2024-05-18 10:00:47,172 | INFO     | cpuconsumptiontime: 87488 s
[2024-05-18 12:01:03] 2024-05-18 10:00:47,172 | INFO     | nevents: 400
[2024-05-18 12:01:03] 2024-05-18 10:00:47,172 | INFO     | neventsw: 0
[2024-05-18 12:01:03] 2024-05-18 10:00:47,172 | INFO     | pid: 3965552
[2024-05-18 12:01:03] 2024-05-18 10:00:47,172 | INFO     | pgrp: 3965552
[2024-05-18 12:01:03] 2024-05-18 10:00:47,172 | INFO     | corecount: 4
[2024-05-18 12:01:03] 2024-05-18 10:00:47,172 | INFO     | event service: False
[2024-05-18 12:01:03] 2024-05-18 10:00:47,172 | INFO     | sizes: {0: 2392080, 1: 2392194, 5: 2392428, 11: 2392484, 22609: 2427023, 22611: 2436005, 22612: 2436189, 22622: 2436359}
[2024-05-18 12:01:03] 2024-05-18 10:00:47,173 | INFO     | --------------------------------------------------
[2024-05-18 12:01:03] 2024-05-18 10:00:47,173 | INFO     | 
[2024-05-18 12:01:03] 2024-05-18 10:00:47,173 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2024-05-18 12:01:03] 2024-05-18 10:00:47,202 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,203 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,203 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,203 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,204 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,204 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,205 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 12:01:03] 2024-05-18 10:00:47,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,205 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 12:01:03] 2024-05-18 10:00:47,206 | INFO     | job 6206856858 has completed (purged errors)
[2024-05-18 12:01:03] 2024-05-18 10:00:47,206 | INFO     | overall cleanup function is called
[2024-05-18 12:01:03] 2024-05-18 10:00:48,214 | INFO     | --- collectZombieJob: --- 10, [3965552]
[2024-05-18 12:01:03] 2024-05-18 10:00:48,214 | INFO     | zombie collector waiting for pid 3965552
[2024-05-18 12:01:03] 2024-05-18 10:00:48,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 12:01:03] 2024-05-18 10:00:49,220 | INFO     | collected zombie processes
[2024-05-18 12:01:03] 2024-05-18 10:00:49,220 | INFO     | will now attempt to kill all subprocesses of pid=3965552
[2024-05-18 12:01:03] 2024-05-18 10:00:49,369 | INFO     | process IDs to be killed: [3965552] (in reverse order)
[2024-05-18 12:01:03] 2024-05-18 10:00:49,508 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 12:01:03] 2024-05-18 10:00:49,509 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 12:01:03] 2024-05-18 10:00:49,523 | INFO     | did not find any defunct processes belonging to 3965552
[2024-05-18 12:01:03] 2024-05-18 10:00:49,536 | INFO     | did not find any defunct processes belonging to 3965552
[2024-05-18 12:01:03] 2024-05-18 10:00:49,536 | INFO     | ready for new job
[2024-05-18 12:01:03] 2024-05-18 10:00:49,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 12:01:03] 2024-05-18 10:00:49,540 | INFO     | *************************************
[2024-05-18 12:01:03] 2024-05-18 10:00:49,540 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 12:01:03] 2024-05-18 10:00:49,540 | INFO     | *************************************
[2024-05-18 12:01:03] 2024-05-18 10:00:49,540 | INFO     | 
[2024-05-18 12:01:03] 2024-05-18 10:00:49,546 | INFO     | architecture information:
[2024-05-18 12:01:03] 2024-05-18 10:00:49,546 | INFO     | executing command: cat /etc/os-release
[2024-05-18 12:01:03] 2024-05-18 10:00:49,568 | INFO     | cat /etc/os-release:
[2024-05-18 12:01:03] NAME="CentOS Linux"
[2024-05-18 12:01:03] VERSION="7 (Core)"
[2024-05-18 12:01:03] ID="centos"
[2024-05-18 12:01:03] ID_LIKE="rhel fedora"
[2024-05-18 12:01:03] VERSION_ID="7"
[2024-05-18 12:01:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 12:01:03] ANSI_COLOR="0;31"
[2024-05-18 12:01:03] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 12:01:03] HOME_URL="https://www.centos.org/"
[2024-05-18 12:01:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 12:01:03] 
[2024-05-18 12:01:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 12:01:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 12:01:03] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 12:01:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 12:01:03] 
[2024-05-18 12:01:03] 2024-05-18 10:00:49,568 | INFO     | *************************************
[2024-05-18 12:01:03] 2024-05-18 10:00:50,070 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2024-05-18 12:01:03] 2024-05-18 10:00:50,095 | INFO     | sufficient remaining disk space (554707189760 B)
[2024-05-18 12:01:03] 2024-05-18 10:00:50,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 12:01:03] 2024-05-18 10:00:50,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 12:01:03] 2024-05-18 10:00:50,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 12:01:03] 2024-05-18 10:00:50,746 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 12:01:03] 2024-05-18 10:00:50,747 | INFO     | aborting loop
[2024-05-18 12:01:03] 2024-05-18 10:00:50,802 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 12:01:03] 2024-05-18 10:00:50,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 12:01:03] 2024-05-18 10:00:50,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 12:01:03] 2024-05-18 10:00:50,844 | INFO     | all data control threads have been joined
[2024-05-18 12:01:03] 2024-05-18 10:00:51,084 | INFO     | all payload control threads have been joined
[2024-05-18 12:01:03] 2024-05-18 10:00:51,101 | INFO     | [job] retrieve thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:51,248 | INFO     | [payload] validate_post thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:51,286 | INFO     | all job control threads have been joined
[2024-05-18 12:01:03] 2024-05-18 10:00:51,294 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:51,325 | INFO     | [data] copytool_in thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:51,594 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:51,688 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:51,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 12:01:03] 2024-05-18 10:00:51,752 | INFO     | [job] job monitor thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:51,794 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:51,849 | INFO     | [data] control thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:52,090 | INFO     | [payload] control thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:52,101 | INFO     | [data] copytool_out thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:52,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 12:01:03] 2024-05-18 10:00:52,255 | INFO     | [job] validate thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:52,292 | INFO     | [job] control thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:52,505 | INFO     | [payload] failed_post thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:52,703 | INFO     | [job] queue monitor thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:56,243 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 12:01:03] 2024-05-18 10:00:57,585 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47463677838400)>', '<ExcThread(monitor, started 47463849088768)>']
[2024-05-18 12:01:03] 2024-05-18 10:00:57,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 12:01:03] 2024-05-18 10:00:57,838 | INFO     | [monitor] control thread has ended
[2024-05-18 12:01:03] 2024-05-18 10:01:02,610 | INFO     | all workflow threads have been joined
[2024-05-18 12:01:03] 2024-05-18 10:01:02,610 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 12:01:03] 2024-05-18 10:01:02,611 | INFO     | traces error code: 0
[2024-05-18 12:01:03] 2024-05-18 10:01:02,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 12:01:03] 2024-05-18 10:01:02,718 [wrapper] ==== pilot stdout END ====
[2024-05-18 12:01:03] 2024-05-18 10:01:02,722 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 12:01:03] 2024-05-18 10:01:02,726 [wrapper] pilotpid: 3958196
[2024-05-18 12:01:03] 2024-05-18 10:01:02,729 [wrapper] Pilot exit status: 0
[2024-05-18 12:01:03] 2024-05-18 10:01:02,741 [wrapper] pandaids: 6206856858
[2024-05-18 12:01:03] 2024-05-18 10:01:02,831 [wrapper] cleanup: SIGTERM to supervisor_pilot  165963 3958197
[2024-05-18 12:01:03] 2024-05-18 10:01:02,835 [wrapper] Test setup, not cleaning
[2024-05-18 12:01:03] 2024-05-18 10:01:02,839 [wrapper] ==== wrapper stdout END ====
[2024-05-18 12:01:03] 2024-05-18 10:01:02,841 [wrapper] ==== wrapper stderr END ====
[2024-05-18 12:01:03] 2024-05-18 10:01:02,848 [wrapper] apfmon messages muted
[2024-05-18 12:01:03]  *** Error codes and diagnostics ***
[2024-05-18 12:01:03]     "exeErrorCode": 0,
[2024-05-18 12:01:03]     "exeErrorDiag": "",
[2024-05-18 12:01:03]     "pilotErrorCode": 0,
[2024-05-18 12:01:03]     "pilotErrorDiag": "",
[2024-05-18 12:01:03]  *** Listing of results directory ***
[2024-05-18 12:01:03] total 926380
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc    467845 May 15 18:54 pilot3.tar.gz
[2024-05-18 12:01:03] -rwx------ 1 boinc boinc     32251 May 15 19:06 runpilot2-wrapper.sh
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc      5633 May 15 19:06 queuedata.json
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc       100 May 18 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 12:01:03] -rwxr-xr-x 1 boinc boinc      7986 May 18 05:43 run_atlas
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc       105 May 18 05:43 job.xml
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc      6663 May 18 05:43 init_data.xml
[2024-05-18 12:01:03] -rw-r--r-- 2 boinc boinc 586244112 May 18 05:43 EVNT.38776201._000040.pool.root.1
[2024-05-18 12:01:03] drwxrwx--x 2 boinc boinc      4096 May 18 05:43 shared
[2024-05-18 12:01:03] -rw-r--r-- 2 boinc boinc    479995 May 18 05:43 input.tar.gz
[2024-05-18 12:01:03] -rw-r--r-- 2 boinc boinc     17537 May 18 05:43 start_atlas.sh
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc         0 May 18 05:43 boinc_lockfile
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc      2625 May 18 05:43 pandaJob.out
[2024-05-18 12:01:03] -rw------- 1 boinc boinc       424 May 18 05:43 setup.sh.local
[2024-05-18 12:01:03] -rw------- 1 boinc boinc   1019073 May 18 05:43 agis_schedconf.cvmfs.json
[2024-05-18 12:01:03] -rw------- 1 boinc boinc   1324701 May 18 05:43 cric_ddmendpoints.json
[2024-05-18 12:01:03] drwx------ 4 boinc boinc      4096 May 18 05:43 pilot3
[2024-05-18 12:01:03] -rw------- 1 boinc boinc 352847811 May 18 11:59 HITS.38921007._000985.pool.root.1
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc       531 May 18 11:59 boinc_task_state.xml
[2024-05-18 12:01:03] -rw------- 1 boinc boinc        95 May 18 12:00 pilot_heartbeat.json
[2024-05-18 12:01:03] -rw------- 1 boinc boinc      1051 May 18 12:00 memory_monitor_summary.json
[2024-05-18 12:01:03] -rw------- 1 boinc boinc         0 May 18 12:00 agis_ddmendpoints.agis.ALL.json
[2024-05-18 12:01:03] -rw------- 1 boinc boinc    437684 May 18 12:00 log.38921007._000985.job.log.tgz.1
[2024-05-18 12:01:03] -rw------- 1 boinc boinc      7763 May 18 12:00 heartbeat.json
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc      8192 May 18 12:01 boinc_mmap_file
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc        28 May 18 12:01 wrapper_checkpoint.txt
[2024-05-18 12:01:03] -rw------- 1 boinc boinc      4221 May 18 12:01 pilotlog.txt
[2024-05-18 12:01:03] -rw------- 1 boinc boinc   2556943 May 18 12:01 log.38921007._000985.job.log.1
[2024-05-18 12:01:03] -rw------- 1 boinc boinc       357 May 18 12:01 output.list
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc       620 May 18 12:01 runtime_log
[2024-05-18 12:01:03] -rw------- 1 boinc boinc   3010560 May 18 12:01 result.tar.gz
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc     11410 May 18 12:01 runtime_log.err
[2024-05-18 12:01:03] -rw------- 1 boinc boinc       660 May 18 12:01 YytNDmTGXR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmvaOKDmKnQWcm.diag
[2024-05-18 12:01:03] -rw-r--r-- 1 boinc boinc     21300 May 18 12:01 stderr.txt
[2024-05-18 12:01:03] HITS file was successfully produced:
[2024-05-18 12:01:03] -rw------- 1 boinc boinc 352847811 May 18 11:59 shared/HITS.pool.root.1
[2024-05-18 12:01:03]  *** Contents of shared directory: ***
[2024-05-18 12:01:03] total 920528
[2024-05-18 12:01:03] -rw-r--r-- 2 boinc boinc 586244112 May 18 05:43 ATLAS.root_0
[2024-05-18 12:01:03] -rw-r--r-- 2 boinc boinc    479995 May 18 05:43 input.tar.gz
[2024-05-18 12:01:03] -rw-r--r-- 2 boinc boinc     17537 May 18 05:43 start_atlas.sh
[2024-05-18 12:01:03] -rw------- 1 boinc boinc 352847811 May 18 11:59 HITS.pool.root.1
[2024-05-18 12:01:03] -rw------- 1 boinc boinc   3010560 May 18 12:01 result.tar.gz
12:01:04 (3953801): run_atlas exited; CPU time 86692.204310
12:01:04 (3953801): called boinc_finish(0)

</stderr_txt>
]]>

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