Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:49:25 (4186948): wrapper (7.7.26015): starting
00:49:25 (4186948): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 00:49:25] Arguments: --nthreads 4
[2024-05-20 00:49:25] Threads: 4
[2024-05-20 00:49:25] Checking for CVMFS
[2024-05-20 00:49:25] No cvmfs_config command found, will try listing directly
[2024-05-20 00:49:25] CVMFS is ok
[2024-05-20 00:49:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 00:49:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 00:49:25] Further information can be found at the LHC@home message board.
[2024-05-20 00:49:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 00:49:25] Checking for apptainer binary...
[2024-05-20 00:49:25] which: no apptainer in ((null))
[2024-05-20 00:49:25] apptainer is not installed, using version from CVMFS
[2024-05-20 00:49:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 00:49:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-20 00:49:26] apptainer works
[2024-05-20 00:49:26] Set ATHENA_PROC_NUMBER=4
[2024-05-20 00:49:26] Set ATHENA_CORE_NUMBER=4
[2024-05-20 00:49:26] Starting ATLAS job with PandaID=6206855910
[2024-05-20 00:49:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 03:07:30]  *** The last 200 lines of the pilot log: ***
[2024-05-20 03:07:30] 2024-05-20 01:07:15,252 | INFO     | model: linear, x: [1716159001.0, 1716159062.0, 1716159123.0, 1716159184.0, 1716159245.0, 1716159306.0, 1716159367.0, 1716159428.0, 1716159489.0, 1716159550.0, 1716
[2024-05-20 03:07:30] 2024-05-20 01:07:15,252 | INFO     | sum of square deviations: 681212772.5
[2024-05-20 03:07:30] 2024-05-20 01:07:15,252 | INFO     | sum of deviations: 56886656479.0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,252 | INFO     | mean x: 1716162935.5
[2024-05-20 03:07:30] 2024-05-20 01:07:15,252 | INFO     | mean y: 2219843.123076923
[2024-05-20 03:07:30] 2024-05-20 01:07:15,252 | INFO     | -- intersect: -143310964105.99426
[2024-05-20 03:07:30] 2024-05-20 01:07:15,252 | INFO     | intersect: -143310964105.99426
[2024-05-20 03:07:30] 2024-05-20 01:07:15,252 | INFO     | chi2: 4.195201835156368
[2024-05-20 03:07:30] 2024-05-20 01:07:15,253 | INFO     | current chi2=4.195201835156368 (change=0.1568898669226563 %)
[2024-05-20 03:07:30] 2024-05-20 01:07:15,253 | INFO     | right removable region: 129
[2024-05-20 03:07:30] 2024-05-20 01:07:15,253 | INFO     | model: linear, x: [1716159306.0, 1716159367.0, 1716159428.0, 1716159489.0, 1716159550.0, 1716159611.0, 1716159672.0, 1716159733.0, 1716159794.0, 1716159855.0, 1716
[2024-05-20 03:07:30] 2024-05-20 01:07:15,253 | INFO     | sum of square deviations: 681212772.5
[2024-05-20 03:07:30] 2024-05-20 01:07:15,253 | INFO     | sum of deviations: 28514031112.999992
[2024-05-20 03:07:30] 2024-05-20 01:07:15,253 | INFO     | mean x: 1716163240.5
[2024-05-20 03:07:30] 2024-05-20 01:07:15,253 | INFO     | mean y: 2281630.7384615387
[2024-05-20 03:07:30] 2024-05-20 01:07:15,253 | INFO     | -- intersect: -71832443157.25557
[2024-05-20 03:07:30] 2024-05-20 01:07:15,253 | INFO     | intersect: -71832443157.25557
[2024-05-20 03:07:30] 2024-05-20 01:07:15,253 | INFO     | chi2: 1.6250709373955432
[2024-05-20 03:07:30] 2024-05-20 01:07:15,253 | INFO     | current chi2=1.6250709373955432 (change=61.32435507232303 %)
[2024-05-20 03:07:30] 2024-05-20 01:07:15,254 | INFO     | model: linear, x: [1716159611.0, 1716159672.0, 1716159733.0, 1716159794.0, 1716159855.0, 1716159916.0, 1716159977.0, 1716160038.0, 1716160099.0, 1716160160.0, 1716
[2024-05-20 03:07:30] 2024-05-20 01:07:15,254 | INFO     | sum of square deviations: 605592750.0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,254 | INFO     | sum of deviations: 3455802073.0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,254 | INFO     | mean x: 1716163393.0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,254 | INFO     | mean y: 2332182.824
[2024-05-20 03:07:30] 2024-05-20 01:07:15,254 | INFO     | -- intersect: -9790917507.06432
[2024-05-20 03:07:30] 2024-05-20 01:07:15,254 | INFO     | intersect: -9790917507.06432
[2024-05-20 03:07:30] 2024-05-20 01:07:15,254 | INFO     | chi2: 0.05309261548646607
[2024-05-20 03:07:30] 2024-05-20 01:07:15,254 | INFO     | current chi2=0.05309261548646607 (change=96.7329047449734 %)
[2024-05-20 03:07:30] 2024-05-20 01:07:15,255 | INFO     | model: linear, x: [1716159916.0, 1716159977.0, 1716160038.0, 1716160099.0, 1716160160.0, 1716160221.0, 1716160282.0, 1716160343.0, 1716160404.0, 1716160465.0, 1716
[2024-05-20 03:07:30] 2024-05-20 01:07:15,255 | INFO     | sum of square deviations: 535786790.0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,255 | INFO     | sum of deviations: 391996004.00000006
[2024-05-20 03:07:30] 2024-05-20 01:07:15,255 | INFO     | mean x: 1716163545.5
[2024-05-20 03:07:30] 2024-05-20 01:07:15,255 | INFO     | mean y: 2338727.05
[2024-05-20 03:07:30] 2024-05-20 01:07:15,255 | INFO     | -- intersect: -1253252610.031066
[2024-05-20 03:07:30] 2024-05-20 01:07:15,256 | INFO     | intersect: -1253252610.031066
[2024-05-20 03:07:30] 2024-05-20 01:07:15,256 | INFO     | chi2: 0.00035961139466509447
[2024-05-20 03:07:30] 2024-05-20 01:07:15,256 | INFO     | current chi2=0.00035961139466509447 (change=99.32267154034488 %)
[2024-05-20 03:07:30] 2024-05-20 01:07:15,256 | INFO     | model: linear, x: [1716160221.0, 1716160282.0, 1716160343.0, 1716160404.0, 1716160465.0, 1716160526.0, 1716160587.0, 1716160648.0, 1716160709.0, 1716160770.0, 1716
[2024-05-20 03:07:30] 2024-05-20 01:07:15,256 | INFO     | sum of square deviations: 471562330.0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,256 | INFO     | sum of deviations: 327922153.0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,256 | INFO     | mean x: 1716163698.0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,256 | INFO     | mean y: 2338872.8260869565
[2024-05-20 03:07:30] 2024-05-20 01:07:15,256 | INFO     | -- intersect: -1191073024.0669532
[2024-05-20 03:07:30] 2024-05-20 01:07:15,256 | INFO     | intersect: -1191073024.0669532
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | chi2: 0.0003204913392524642
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | current chi2=0.0003204913392524642 (change=10.878424875569568 %)
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | left removable region: 40
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | model: linear, x: [1716161441.0, 1716161502.0, 1716161563.0, 1716161624.0, 1716161685.0, 1716161746.0, 1716161807.0, 1716161868.0, 1716161929.0, 1716161990.0, 1716
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | sum of square deviations: 218571540.0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | sum of deviations: 203267005.9999999
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | mean x: 1716164125.0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | mean y: 2338999.2921348317
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | -- intersect: -1593658098.4698136
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | intersect: -1593658098.4698136
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | chi2: 7.350890603749759e-06
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | -- intersect: -1593658098.4698136
[2024-05-20 03:07:30] 2024-05-20 01:07:15,257 | INFO     | current memory leak: 0.93 B/s (using 89 data points, chi2=0.00)
[2024-05-20 03:07:30] 2024-05-20 01:07:15,258 | INFO     | ..............................
[2024-05-20 03:07:30] 2024-05-20 01:07:15,258 | INFO     | . Timing measurements:
[2024-05-20 03:07:30] 2024-05-20 01:07:15,258 | INFO     | . get job = 0 s
[2024-05-20 03:07:30] 2024-05-20 01:07:15,258 | INFO     | . initial setup = 1 s
[2024-05-20 03:07:30] 2024-05-20 01:07:15,258 | INFO     | . payload setup = 5 s
[2024-05-20 03:07:30] 2024-05-20 01:07:15,258 | INFO     | . stage-in = 0 s
[2024-05-20 03:07:30] 2024-05-20 01:07:15,258 | INFO     | . payload execution = 8227 s
[2024-05-20 03:07:30] 2024-05-20 01:07:15,258 | INFO     | . stage-out = 0 s
[2024-05-20 03:07:30] 2024-05-20 01:07:15,258 | INFO     | . log creation = 0 s
[2024-05-20 03:07:30] 2024-05-20 01:07:15,258 | INFO     | ..............................
[2024-05-20 03:07:30] 2024-05-20 01:07:15,459 | WARNING  | process 6362 is no longer using CPU - aborting
[2024-05-20 03:07:30] 2024-05-20 01:07:15,459 | INFO     | aborting job monitoring since job object (job id=6206855910) has expired
[2024-05-20 03:07:30] 2024-05-20 01:07:15,596 | INFO     | 
[2024-05-20 03:07:30] 2024-05-20 01:07:15,597 | INFO     | job summary report
[2024-05-20 03:07:30] 2024-05-20 01:07:15,597 | INFO     | --------------------------------------------------
[2024-05-20 03:07:30] 2024-05-20 01:07:15,597 | INFO     | PanDA job id: 6206855910
[2024-05-20 03:07:30] 2024-05-20 01:07:15,597 | INFO     | task id: 38776104
[2024-05-20 03:07:30] 2024-05-20 01:07:15,597 | INFO     | errors: (none)
[2024-05-20 03:07:30] 2024-05-20 01:07:15,597 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 03:07:30] 2024-05-20 01:07:15,597 | INFO     | pilot state: finished 
[2024-05-20 03:07:30] 2024-05-20 01:07:15,597 | INFO     | transexitcode: 0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,597 | INFO     | exeerrorcode: 0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,597 | INFO     | exeerrordiag: 
[2024-05-20 03:07:30] 2024-05-20 01:07:15,597 | INFO     | exitcode: 0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,597 | INFO     | exitmsg: OK
[2024-05-20 03:07:30] 2024-05-20 01:07:15,598 | INFO     | cpuconsumptiontime: 30196 s
[2024-05-20 03:07:30] 2024-05-20 01:07:15,598 | INFO     | nevents: 400
[2024-05-20 03:07:30] 2024-05-20 01:07:15,598 | INFO     | neventsw: 0
[2024-05-20 03:07:30] 2024-05-20 01:07:15,598 | INFO     | pid: 6362
[2024-05-20 03:07:30] 2024-05-20 01:07:15,598 | INFO     | pgrp: 6362
[2024-05-20 03:07:30] 2024-05-20 01:07:15,598 | INFO     | corecount: 4
[2024-05-20 03:07:30] 2024-05-20 01:07:15,598 | INFO     | event service: False
[2024-05-20 03:07:30] 2024-05-20 01:07:15,598 | INFO     | sizes: {0: 2391991, 1: 2392190, 5: 2392396, 11: 2392452, 8236: 2420234, 8237: 2429216, 8238: 2429400, 8244: 2429570}
[2024-05-20 03:07:30] 2024-05-20 01:07:15,598 | INFO     | --------------------------------------------------
[2024-05-20 03:07:30] 2024-05-20 01:07:15,598 | INFO     | 
[2024-05-20 03:07:30] 2024-05-20 01:07:15,598 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/1
[2024-05-20 03:07:30] 2024-05-20 01:07:15,625 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,625 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,626 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,627 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,627 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,627 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 03:07:30] 2024-05-20 01:07:15,627 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,627 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 03:07:30] 2024-05-20 01:07:15,627 | INFO     | job 6206855910 has completed (purged errors)
[2024-05-20 03:07:30] 2024-05-20 01:07:15,627 | INFO     | overall cleanup function is called
[2024-05-20 03:07:30] 2024-05-20 01:07:16,635 | INFO     | --- collectZombieJob: --- 10, [6362]
[2024-05-20 03:07:30] 2024-05-20 01:07:16,635 | INFO     | zombie collector waiting for pid 6362
[2024-05-20 03:07:30] 2024-05-20 01:07:16,635 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 03:07:30] 2024-05-20 01:07:17,641 | INFO     | collected zombie processes
[2024-05-20 03:07:30] 2024-05-20 01:07:17,641 | INFO     | will now attempt to kill all subprocesses of pid=6362
[2024-05-20 03:07:30] 2024-05-20 01:07:17,837 | INFO     | process IDs to be killed: [6362] (in reverse order)
[2024-05-20 03:07:30] 2024-05-20 01:07:17,979 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 03:07:30] 2024-05-20 01:07:17,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 03:07:30] 2024-05-20 01:07:17,992 | INFO     | did not find any defunct processes belonging to 6362
[2024-05-20 03:07:30] 2024-05-20 01:07:18,003 | INFO     | did not find any defunct processes belonging to 6362
[2024-05-20 03:07:30] 2024-05-20 01:07:18,003 | INFO     | ready for new job
[2024-05-20 03:07:30] 2024-05-20 01:07:18,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 03:07:30] 2024-05-20 01:07:18,005 | INFO     | *************************************
[2024-05-20 03:07:30] 2024-05-20 01:07:18,005 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 03:07:30] 2024-05-20 01:07:18,005 | INFO     | *************************************
[2024-05-20 03:07:30] 2024-05-20 01:07:18,005 | INFO     | 
[2024-05-20 03:07:30] 2024-05-20 01:07:18,012 | INFO     | architecture information:
[2024-05-20 03:07:30] 2024-05-20 01:07:18,012 | INFO     | executing command: cat /etc/os-release
[2024-05-20 03:07:30] 2024-05-20 01:07:18,029 | INFO     | cat /etc/os-release:
[2024-05-20 03:07:30] NAME="CentOS Linux"
[2024-05-20 03:07:30] VERSION="7 (Core)"
[2024-05-20 03:07:30] ID="centos"
[2024-05-20 03:07:30] ID_LIKE="rhel fedora"
[2024-05-20 03:07:30] VERSION_ID="7"
[2024-05-20 03:07:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 03:07:30] ANSI_COLOR="0;31"
[2024-05-20 03:07:30] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 03:07:30] HOME_URL="https://www.centos.org/"
[2024-05-20 03:07:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 03:07:30] 
[2024-05-20 03:07:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 03:07:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 03:07:30] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 03:07:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 03:07:30] 
[2024-05-20 03:07:30] 2024-05-20 01:07:18,029 | INFO     | *************************************
[2024-05-20 03:07:30] 2024-05-20 01:07:18,532 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/1
[2024-05-20 03:07:30] 2024-05-20 01:07:18,552 | INFO     | sufficient remaining disk space (3101858725888 B)
[2024-05-20 03:07:30] 2024-05-20 01:07:18,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 03:07:30] 2024-05-20 01:07:18,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 03:07:30] 2024-05-20 01:07:18,553 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 03:07:30] 2024-05-20 01:07:18,553 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 03:07:30] 2024-05-20 01:07:18,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 03:07:30] 2024-05-20 01:07:18,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 03:07:30] 2024-05-20 01:07:18,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 03:07:30] 2024-05-20 01:07:18,967 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 03:07:30] 2024-05-20 01:07:18,968 | INFO     | aborting loop
[2024-05-20 03:07:30] 2024-05-20 01:07:19,033 | INFO     | all payload control threads have been joined
[2024-05-20 03:07:30] 2024-05-20 01:07:19,247 | INFO     | all job control threads have been joined
[2024-05-20 03:07:30] 2024-05-20 01:07:19,287 | INFO     | all data control threads have been joined
[2024-05-20 03:07:30] 2024-05-20 01:07:19,558 | INFO     | [job] retrieve thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:19,588 | INFO     | [payload] failed_post thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:19,606 | INFO     | [job] validate thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:19,620 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:19,724 | INFO     | [data] copytool_in thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:19,745 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:19,968 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:19,972 | INFO     | [job] job monitor thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:20,031 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:20,039 | INFO     | [payload] control thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:20,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 03:07:30] 2024-05-20 01:07:20,252 | INFO     | [job] control thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:20,292 | INFO     | [data] control thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:20,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 03:07:30] 2024-05-20 01:07:20,490 | INFO     | [payload] validate_post thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:20,880 | INFO     | [data] copytool_out thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:21,333 | INFO     | [job] queue monitor thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:24,059 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 03:07:30] 2024-05-20 01:07:24,957 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47704315769920)>', '<ExcThread(monitor, started 47704489121536)>']
[2024-05-20 03:07:30] 2024-05-20 01:07:25,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 03:07:30] 2024-05-20 01:07:25,588 | INFO     | [monitor] control thread has ended
[2024-05-20 03:07:30] 2024-05-20 01:07:29,977 | INFO     | all workflow threads have been joined
[2024-05-20 03:07:30] 2024-05-20 01:07:29,977 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 03:07:30] 2024-05-20 01:07:29,977 | INFO     | traces error code: 0
[2024-05-20 03:07:30] 2024-05-20 01:07:29,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 03:07:30] 2024-05-20 01:07:30,042 [wrapper] ==== pilot stdout END ====
[2024-05-20 03:07:30] 2024-05-20 01:07:30,045 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 03:07:30] 2024-05-20 01:07:30,046 [wrapper] pilotpid: 4191586
[2024-05-20 03:07:30] 2024-05-20 01:07:30,048 [wrapper] Pilot exit status: 0
[2024-05-20 03:07:30] 2024-05-20 01:07:30,056 [wrapper] pandaids: 6206855910
[2024-05-20 03:07:30] 2024-05-20 01:07:30,133 [wrapper] cleanup: SIGTERM to supervisor_pilot  933238 4191587
[2024-05-20 03:07:30] 2024-05-20 01:07:30,135 [wrapper] Test setup, not cleaning
[2024-05-20 03:07:30] 2024-05-20 01:07:30,137 [wrapper] ==== wrapper stdout END ====
[2024-05-20 03:07:30] 2024-05-20 01:07:30,140 [wrapper] ==== wrapper stderr END ====
[2024-05-20 03:07:30] 2024-05-20 01:07:30,143 [wrapper] apfmon messages muted
[2024-05-20 03:07:30]  *** Error codes and diagnostics ***
[2024-05-20 03:07:30]     "exeErrorCode": 0,
[2024-05-20 03:07:30]     "exeErrorDiag": "",
[2024-05-20 03:07:30]     "pilotErrorCode": 0,
[2024-05-20 03:07:30]     "pilotErrorDiag": "",
[2024-05-20 03:07:30]  *** Listing of results directory ***
[2024-05-20 03:07:30] total 823712
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc    467845 May 15 18:42 pilot3.tar.gz
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc      5633 May 15 18:44 queuedata.json
[2024-05-20 03:07:30] -rwx------ 1 boinc boinc     32251 May 15 18:46 runpilot2-wrapper.sh
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc       100 May 20 00:49 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 03:07:30] -rwxr-xr-x 1 boinc boinc      7986 May 20 00:49 run_atlas
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc       105 May 20 00:49 job.xml
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc      6644 May 20 00:49 init_data.xml
[2024-05-20 03:07:30] -rw-r--r-- 2 boinc boinc 604008154 May 20 00:49 EVNT.38776100._000289.pool.root.1
[2024-05-20 03:07:30] -rw-r--r-- 2 boinc boinc     17537 May 20 00:49 start_atlas.sh
[2024-05-20 03:07:30] drwxrwx--x 2 boinc boinc      4096 May 20 00:49 shared
[2024-05-20 03:07:30] -rw-r--r-- 2 boinc boinc    480007 May 20 00:49 input.tar.gz
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc         0 May 20 00:49 boinc_lockfile
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc      2640 May 20 00:49 pandaJob.out
[2024-05-20 03:07:30] -rw------- 1 boinc boinc       424 May 20 00:49 setup.sh.local
[2024-05-20 03:07:30] -rw------- 1 boinc boinc   1013669 May 20 00:49 agis_schedconf.cvmfs.json
[2024-05-20 03:07:30] -rw------- 1 boinc boinc         0 May 20 00:49 agis_ddmendpoints.agis.ALL.json
[2024-05-20 03:07:30] -rw------- 1 boinc boinc   1324701 May 20 00:49 cric_ddmendpoints.json
[2024-05-20 03:07:30] drwx------ 4 boinc boinc      4096 May 20 00:49 pilot3
[2024-05-20 03:07:30] -rw------- 1 boinc boinc 233668702 May 20 03:06 HITS.38776104._007151.pool.root.1
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc       530 May 20 03:06 boinc_task_state.xml
[2024-05-20 03:07:30] -rw------- 1 boinc boinc        95 May 20 03:06 pilot_heartbeat.json
[2024-05-20 03:07:30] -rw------- 1 boinc boinc      1037 May 20 03:07 memory_monitor_summary.json
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc      8192 May 20 03:07 boinc_mmap_file
[2024-05-20 03:07:30] -rw------- 1 boinc boinc    290650 May 20 03:07 log.38776104._007151.job.log.tgz.1
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc        27 May 20 03:07 wrapper_checkpoint.txt
[2024-05-20 03:07:30] -rw------- 1 boinc boinc      7709 May 20 03:07 heartbeat.json
[2024-05-20 03:07:30] -rw------- 1 boinc boinc      4345 May 20 03:07 pilotlog.txt
[2024-05-20 03:07:30] -rw------- 1 boinc boinc    844548 May 20 03:07 log.38776104._007151.job.log.1
[2024-05-20 03:07:30] -rw------- 1 boinc boinc       357 May 20 03:07 output.list
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc       620 May 20 03:07 runtime_log
[2024-05-20 03:07:30] -rw------- 1 boinc boinc   1157120 May 20 03:07 result.tar.gz
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc     11409 May 20 03:07 runtime_log.err
[2024-05-20 03:07:30] -rw------- 1 boinc boinc       653 May 20 03:07 Gy8NDmCxWR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmlbJKDm4efecm.diag
[2024-05-20 03:07:30] -rw-r--r-- 1 boinc boinc     21383 May 20 03:07 stderr.txt
[2024-05-20 03:07:30] HITS file was successfully produced:
[2024-05-20 03:07:30] -rw------- 1 boinc boinc 233668702 May 20 03:06 shared/HITS.pool.root.1
[2024-05-20 03:07:30]  *** Contents of shared directory: ***
[2024-05-20 03:07:30] total 819680
[2024-05-20 03:07:30] -rw-r--r-- 2 boinc boinc 604008154 May 20 00:49 ATLAS.root_0
[2024-05-20 03:07:30] -rw-r--r-- 2 boinc boinc     17537 May 20 00:49 start_atlas.sh
[2024-05-20 03:07:30] -rw-r--r-- 2 boinc boinc    480007 May 20 00:49 input.tar.gz
[2024-05-20 03:07:30] -rw------- 1 boinc boinc 233668702 May 20 03:06 HITS.pool.root.1
[2024-05-20 03:07:30] -rw------- 1 boinc boinc   1157120 May 20 03:07 result.tar.gz
03:07:32 (4186948): run_atlas exited; CPU time 30012.436323
03:07:32 (4186948): called boinc_finish(0)

</stderr_txt>
]]>

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