Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:04:34 (1079494): wrapper (7.7.26015): starting
03:04:34 (1079494): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 03:04:34] Arguments: --nthreads 4
[2024-05-20 03:04:34] Threads: 4
[2024-05-20 03:04:34] Checking for CVMFS
[2024-05-20 03:04:34] No cvmfs_config command found, will try listing directly
[2024-05-20 03:04:34] CVMFS is ok
[2024-05-20 03:04:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 03:04:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 03:04:34] Further information can be found at the LHC@home message board.
[2024-05-20 03:04:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 03:04:34] Checking for apptainer binary...
[2024-05-20 03:04:34] which: no apptainer in ((null))
[2024-05-20 03:04:34] apptainer is not installed, using version from CVMFS
[2024-05-20 03:04:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 03:04:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-05-20 03:04:35] apptainer works
[2024-05-20 03:04:35] Set ATHENA_PROC_NUMBER=4
[2024-05-20 03:04:35] Set ATHENA_CORE_NUMBER=4
[2024-05-20 03:04:35] Starting ATLAS job with PandaID=6206854910
[2024-05-20 03:04:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 05:27:08]  *** The last 200 lines of the pilot log: ***
[2024-05-20 05:27:08] 2024-05-20 03:26:47,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-20 05:27:08] 2024-05-20 03:26:47,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 05:27:08] 2024-05-20 03:26:47,538 | INFO     | fitting pss+swap vs Time
[2024-05-20 05:27:08] 2024-05-20 03:26:47,538 | INFO     | model: linear, x: [1716167110.0, 1716167171.0, 1716167232.0, 1716167293.0, 1716167354.0, 1716167415.0, 1716167476.0, 1716167537.0, 1716167598.0, 1716167659.0, 1716
[2024-05-20 05:27:08] 2024-05-20 03:26:47,539 | INFO     | sum of square deviations: 850825255.0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,539 | INFO     | sum of deviations: 53021911931.0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,539 | INFO     | mean x: 1716171349.5
[2024-05-20 05:27:08] 2024-05-20 03:26:47,539 | INFO     | mean y: 2218480.2285714285
[2024-05-20 05:27:08] 2024-05-20 03:26:47,539 | INFO     | -- intersect: -106946518192.726
[2024-05-20 05:27:08] 2024-05-20 03:26:47,539 | INFO     | intersect: -106946518192.726
[2024-05-20 05:27:08] 2024-05-20 03:26:47,539 | INFO     | chi2: 4.832236730389107
[2024-05-20 05:27:08] 2024-05-20 03:26:47,540 | INFO     | model: linear, x: [1716167110.0, 1716167171.0, 1716167232.0, 1716167293.0, 1716167354.0, 1716167415.0, 1716167476.0, 1716167537.0, 1716167598.0, 1716167659.0, 1716
[2024-05-20 05:27:08] 2024-05-20 03:26:47,540 | INFO     | sum of square deviations: 762879420.0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,540 | INFO     | sum of deviations: 59568370686.99999
[2024-05-20 05:27:08] 2024-05-20 03:26:47,540 | INFO     | mean x: 1716171197.0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,540 | INFO     | mean y: 2229388.962962963
[2024-05-20 05:27:08] 2024-05-20 03:26:47,540 | INFO     | -- intersect: -134002594106.27367
[2024-05-20 05:27:08] 2024-05-20 03:26:47,540 | INFO     | intersect: -134002594106.27367
[2024-05-20 05:27:08] 2024-05-20 03:26:47,540 | INFO     | chi2: 4.035193964134301
[2024-05-20 05:27:08] 2024-05-20 03:26:47,540 | INFO     | current chi2=4.035193964134301 (change=16.49428226978909 %)
[2024-05-20 05:27:08] 2024-05-20 03:26:47,540 | INFO     | right removable region: 134
[2024-05-20 05:27:08] 2024-05-20 03:26:47,541 | INFO     | model: linear, x: [1716167415.0, 1716167476.0, 1716167537.0, 1716167598.0, 1716167659.0, 1716167720.0, 1716167781.0, 1716167842.0, 1716167903.0, 1716167964.0, 1716
[2024-05-20 05:27:08] 2024-05-20 03:26:47,541 | INFO     | sum of square deviations: 762879420.0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,541 | INFO     | sum of deviations: 21587607504.999992
[2024-05-20 05:27:08] 2024-05-20 03:26:47,541 | INFO     | mean x: 1716171502.0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,541 | INFO     | mean y: 2272773.1407407406
[2024-05-20 05:27:08] 2024-05-20 03:26:47,541 | INFO     | -- intersect: -48561151308.27216
[2024-05-20 05:27:08] 2024-05-20 03:26:47,541 | INFO     | intersect: -48561151308.27216
[2024-05-20 05:27:08] 2024-05-20 03:26:47,541 | INFO     | chi2: 2.3441903053786293
[2024-05-20 05:27:08] 2024-05-20 03:26:47,541 | INFO     | current chi2=2.3441903053786293 (change=51.48850447171972 %)
[2024-05-20 05:27:08] 2024-05-20 03:26:47,541 | INFO     | model: linear, x: [1716167720.0, 1716167781.0, 1716167842.0, 1716167903.0, 1716167964.0, 1716168025.0, 1716168086.0, 1716168147.0, 1716168208.0, 1716168269.0, 1716
[2024-05-20 05:27:08] 2024-05-20 03:26:47,542 | INFO     | sum of square deviations: 681212772.5
[2024-05-20 05:27:08] 2024-05-20 03:26:47,542 | INFO     | sum of deviations: -3643973134.499999
[2024-05-20 05:27:08] 2024-05-20 03:26:47,542 | INFO     | mean x: 1716171654.5
[2024-05-20 05:27:08] 2024-05-20 03:26:47,542 | INFO     | mean y: 2319904.2384615387
[2024-05-20 05:27:08] 2024-05-20 03:26:47,542 | INFO     | -- intersect: 9182540322.358139
[2024-05-20 05:27:08] 2024-05-20 03:26:47,542 | INFO     | intersect: 9182540322.358139
[2024-05-20 05:27:08] 2024-05-20 03:26:47,542 | INFO     | chi2: 0.8742302049616876
[2024-05-20 05:27:08] 2024-05-20 03:26:47,542 | INFO     | current chi2=0.8742302049616876 (change=62.706517343928546 %)
[2024-05-20 05:27:08] 2024-05-20 03:26:47,542 | INFO     | model: linear, x: [1716168025.0, 1716168086.0, 1716168147.0, 1716168208.0, 1716168269.0, 1716168330.0, 1716168391.0, 1716168452.0, 1716168513.0, 1716168574.0, 1716
[2024-05-20 05:27:08] 2024-05-20 03:26:47,542 | INFO     | sum of square deviations: 605592750.0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,543 | INFO     | sum of deviations: -6516989595.0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,543 | INFO     | mean x: 1716171807.0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,543 | INFO     | mean y: 2325590.392
[2024-05-20 05:27:08] 2024-05-20 03:26:47,543 | INFO     | -- intersect: 18470634217.68542
[2024-05-20 05:27:08] 2024-05-20 03:26:47,543 | INFO     | intersect: 18470634217.68542
[2024-05-20 05:27:08] 2024-05-20 03:26:47,543 | INFO     | chi2: 0.8344489269588108
[2024-05-20 05:27:08] 2024-05-20 03:26:47,543 | INFO     | current chi2=0.8344489269588108 (change=4.5504350887327405 %)
[2024-05-20 05:27:08] 2024-05-20 03:26:47,543 | INFO     | left removable region: 30
[2024-05-20 05:27:08] 2024-05-20 03:26:47,543 | INFO     | model: linear, x: [1716168940.0, 1716169001.0, 1716169062.0, 1716169123.0, 1716169184.0, 1716169245.0, 1716169306.0, 1716169367.0, 1716169428.0, 1716169489.0, 1716
[2024-05-20 05:27:08] 2024-05-20 03:26:47,543 | INFO     | sum of square deviations: 348769330.0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,544 | INFO     | sum of deviations: 506617474.5
[2024-05-20 05:27:08] 2024-05-20 03:26:47,544 | INFO     | mean x: 1716172081.5
[2024-05-20 05:27:08] 2024-05-20 03:26:47,544 | INFO     | mean y: 2344475.875
[2024-05-20 05:27:08] 2024-05-20 03:26:47,544 | INFO     | -- intersect: -2490543203.6034055
[2024-05-20 05:27:08] 2024-05-20 03:26:47,544 | INFO     | intersect: -2490543203.6034055
[2024-05-20 05:27:08] 2024-05-20 03:26:47,544 | INFO     | chi2: 5.2456360179208094e-05
[2024-05-20 05:27:08] 2024-05-20 03:26:47,544 | INFO     | -- intersect: -2490543203.6034055
[2024-05-20 05:27:08] 2024-05-20 03:26:47,544 | INFO     | current memory leak: 1.45 B/s (using 104 data points, chi2=0.00)
[2024-05-20 05:27:08] 2024-05-20 03:26:47,544 | INFO     | ..............................
[2024-05-20 05:27:08] 2024-05-20 03:26:47,545 | INFO     | . Timing measurements:
[2024-05-20 05:27:08] 2024-05-20 03:26:47,545 | INFO     | . get job = 0 s
[2024-05-20 05:27:08] 2024-05-20 03:26:47,545 | INFO     | . initial setup = 1 s
[2024-05-20 05:27:08] 2024-05-20 03:26:47,545 | INFO     | . payload setup = 5 s
[2024-05-20 05:27:08] 2024-05-20 03:26:47,545 | INFO     | . stage-in = 0 s
[2024-05-20 05:27:08] 2024-05-20 03:26:47,545 | INFO     | . payload execution = 8490 s
[2024-05-20 05:27:08] 2024-05-20 03:26:47,545 | INFO     | . stage-out = 0 s
[2024-05-20 05:27:08] 2024-05-20 03:26:47,545 | INFO     | . log creation = 0 s
[2024-05-20 05:27:08] 2024-05-20 03:26:47,545 | INFO     | ..............................
[2024-05-20 05:27:08] 2024-05-20 03:26:47,606 | INFO     | 
[2024-05-20 05:27:08] 2024-05-20 03:26:47,606 | INFO     | job summary report
[2024-05-20 05:27:08] 2024-05-20 03:26:47,606 | INFO     | --------------------------------------------------
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | PanDA job id: 6206854910
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | task id: 38776104
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | errors: (none)
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | pilot state: finished 
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | transexitcode: 0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | exeerrorcode: 0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | exeerrordiag: 
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | exitcode: 0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | exitmsg: OK
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | cpuconsumptiontime: 31380 s
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | nevents: 400
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | neventsw: 0
[2024-05-20 05:27:08] 2024-05-20 03:26:47,607 | INFO     | pid: 1107580
[2024-05-20 05:27:08] 2024-05-20 03:26:47,608 | INFO     | pgrp: 1107580
[2024-05-20 05:27:08] 2024-05-20 03:26:47,608 | INFO     | corecount: 4
[2024-05-20 05:27:08] 2024-05-20 03:26:47,608 | INFO     | event service: False
[2024-05-20 05:27:08] 2024-05-20 03:26:47,608 | INFO     | sizes: {0: 2392041, 1: 2392240, 5: 2392446, 11: 2392502, 8499: 2420399, 8500: 2429381, 8503: 2429565, 8508: 2429735}
[2024-05-20 05:27:08] 2024-05-20 03:26:47,608 | INFO     | --------------------------------------------------
[2024-05-20 05:27:08] 2024-05-20 03:26:47,608 | INFO     | 
[2024-05-20 05:27:08] 2024-05-20 03:26:47,608 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/1
[2024-05-20 05:27:08] 2024-05-20 03:26:47,629 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,630 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,630 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,630 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,631 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 05:27:08] 2024-05-20 03:26:47,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,631 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 05:27:08] 2024-05-20 03:26:47,631 | INFO     | job 6206854910 has completed (purged errors)
[2024-05-20 05:27:08] 2024-05-20 03:26:47,631 | INFO     | overall cleanup function is called
[2024-05-20 05:27:08] 2024-05-20 03:26:48,639 | INFO     | --- collectZombieJob: --- 10, [1107580]
[2024-05-20 05:27:08] 2024-05-20 03:26:48,639 | INFO     | zombie collector waiting for pid 1107580
[2024-05-20 05:27:08] 2024-05-20 03:26:48,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 05:27:08] 2024-05-20 03:26:49,644 | INFO     | collected zombie processes
[2024-05-20 05:27:08] 2024-05-20 03:26:49,645 | INFO     | will now attempt to kill all subprocesses of pid=1107580
[2024-05-20 05:27:08] 2024-05-20 03:26:49,829 | INFO     | process IDs to be killed: [1107580] (in reverse order)
[2024-05-20 05:27:08] 2024-05-20 03:26:49,988 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 05:27:08] 2024-05-20 03:26:49,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 05:27:08] 2024-05-20 03:26:50,008 | INFO     | did not find any defunct processes belonging to 1107580
[2024-05-20 05:27:08] 2024-05-20 03:26:50,022 | INFO     | did not find any defunct processes belonging to 1107580
[2024-05-20 05:27:08] 2024-05-20 03:26:50,022 | INFO     | ready for new job
[2024-05-20 05:27:08] 2024-05-20 03:26:50,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 05:27:08] 2024-05-20 03:26:50,024 | INFO     | *************************************
[2024-05-20 05:27:08] 2024-05-20 03:26:50,024 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 05:27:08] 2024-05-20 03:26:50,024 | INFO     | *************************************
[2024-05-20 05:27:08] 2024-05-20 03:26:50,024 | INFO     | 
[2024-05-20 05:27:08] 2024-05-20 03:26:50,031 | INFO     | architecture information:
[2024-05-20 05:27:08] 2024-05-20 03:26:50,031 | INFO     | executing command: cat /etc/os-release
[2024-05-20 05:27:08] 2024-05-20 03:26:50,045 | INFO     | cat /etc/os-release:
[2024-05-20 05:27:08] NAME="CentOS Linux"
[2024-05-20 05:27:08] VERSION="7 (Core)"
[2024-05-20 05:27:08] ID="centos"
[2024-05-20 05:27:08] ID_LIKE="rhel fedora"
[2024-05-20 05:27:08] VERSION_ID="7"
[2024-05-20 05:27:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 05:27:08] ANSI_COLOR="0;31"
[2024-05-20 05:27:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 05:27:08] HOME_URL="https://www.centos.org/"
[2024-05-20 05:27:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 05:27:08] 
[2024-05-20 05:27:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 05:27:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 05:27:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 05:27:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 05:27:08] 
[2024-05-20 05:27:08] 2024-05-20 03:26:50,046 | INFO     | *************************************
[2024-05-20 05:27:08] 2024-05-20 03:26:50,549 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/1
[2024-05-20 05:27:08] 2024-05-20 03:26:50,566 | INFO     | sufficient remaining disk space (2997004271616 B)
[2024-05-20 05:27:08] 2024-05-20 03:26:50,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 05:27:08] 2024-05-20 03:26:50,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 05:27:08] 2024-05-20 03:26:50,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 05:27:08] 2024-05-20 03:26:50,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 05:27:08] 2024-05-20 03:26:50,694 | INFO     | all data control threads have been joined
[2024-05-20 05:27:08] 2024-05-20 03:26:51,313 | INFO     | all job control threads have been joined
[2024-05-20 05:27:08] 2024-05-20 03:26:51,340 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 05:27:08] 2024-05-20 03:26:51,341 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 05:27:08] 2024-05-20 03:26:51,341 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 05:27:08] 2024-05-20 03:26:51,398 | INFO     | all payload control threads have been joined
[2024-05-20 05:27:08] 2024-05-20 03:26:51,400 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 05:27:08] 2024-05-20 03:26:51,400 | INFO     | aborting loop
[2024-05-20 05:27:08] 2024-05-20 03:26:51,572 | INFO     | [job] retrieve thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:51,660 | INFO     | [payload] validate_post thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:51,700 | INFO     | [data] control thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:51,907 | INFO     | [data] copytool_in thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:52,305 | INFO     | [payload] failed_post thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:52,318 | INFO     | [job] control thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:52,378 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:52,403 | INFO     | [payload] control thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:52,406 | INFO     | [job] job monitor thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:52,534 | INFO     | [job] validate thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:52,582 | INFO     | [data] copytool_out thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:52,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 05:27:08] 2024-05-20 03:26:53,071 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:53,072 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:53,622 | INFO     | [job] queue monitor thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:26:54,569 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:27:01,242 | INFO     | job.realtimelogging is not enabled
[2024-05-20 05:27:08] 2024-05-20 03:27:02,248 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 05:27:08] 2024-05-20 03:27:02,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47858304066624)>', '<ExcThread(monitor, started 47858477418240)>']
[2024-05-20 05:27:08] 2024-05-20 03:27:03,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 05:27:08] 2024-05-20 03:27:03,401 | INFO     | [monitor] control thread has ended
[2024-05-20 05:27:08] 2024-05-20 03:27:07,754 | INFO     | all workflow threads have been joined
[2024-05-20 05:27:08] 2024-05-20 03:27:07,754 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 05:27:08] 2024-05-20 03:27:07,754 | INFO     | traces error code: 0
[2024-05-20 05:27:08] 2024-05-20 03:27:07,754 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 05:27:08] 2024-05-20 03:27:07,823 [wrapper] ==== pilot stdout END ====
[2024-05-20 05:27:08] 2024-05-20 03:27:07,825 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 05:27:08] 2024-05-20 03:27:07,826 [wrapper] pilotpid: 1087314
[2024-05-20 05:27:08] 2024-05-20 03:27:07,828 [wrapper] Pilot exit status: 0
[2024-05-20 05:27:08] 2024-05-20 03:27:07,837 [wrapper] pandaids: 6206854910
[2024-05-20 05:27:08] 2024-05-20 03:27:07,932 [wrapper] cleanup: SIGTERM to supervisor_pilot 1687201 1087315
[2024-05-20 05:27:08] 2024-05-20 03:27:07,935 [wrapper] Test setup, not cleaning
[2024-05-20 05:27:08] 2024-05-20 03:27:07,937 [wrapper] ==== wrapper stdout END ====
[2024-05-20 05:27:08] 2024-05-20 03:27:07,938 [wrapper] ==== wrapper stderr END ====
[2024-05-20 05:27:08] 2024-05-20 03:27:07,942 [wrapper] apfmon messages muted
[2024-05-20 05:27:08]  *** Error codes and diagnostics ***
[2024-05-20 05:27:08]     "exeErrorCode": 0,
[2024-05-20 05:27:08]     "exeErrorDiag": "",
[2024-05-20 05:27:08]     "pilotErrorCode": 0,
[2024-05-20 05:27:08]     "pilotErrorDiag": "",
[2024-05-20 05:27:08]  *** Listing of results directory ***
[2024-05-20 05:27:08] total 814560
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc    467845 May 15 18:22 pilot3.tar.gz
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc      5633 May 15 18:29 queuedata.json
[2024-05-20 05:27:08] -rwx------ 1 boinc boinc     32251 May 15 18:29 runpilot2-wrapper.sh
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc       100 May 20 03:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 05:27:08] -rwxr-xr-x 1 boinc boinc      7986 May 20 03:04 run_atlas
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc       105 May 20 03:04 job.xml
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc      6644 May 20 03:04 init_data.xml
[2024-05-20 05:27:08] -rw-r--r-- 2 boinc boinc 597508150 May 20 03:04 EVNT.38776100._000285.pool.root.1
[2024-05-20 05:27:08] -rw-r--r-- 2 boinc boinc     17537 May 20 03:04 start_atlas.sh
[2024-05-20 05:27:08] drwxrwx--x 2 boinc boinc      4096 May 20 03:04 shared
[2024-05-20 05:27:08] -rw-r--r-- 2 boinc boinc    480006 May 20 03:04 input.tar.gz
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc         0 May 20 03:04 boinc_lockfile
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc      2640 May 20 03:04 pandaJob.out
[2024-05-20 05:27:08] -rw------- 1 boinc boinc       424 May 20 03:04 setup.sh.local
[2024-05-20 05:27:08] -rw------- 1 boinc boinc   1013669 May 20 03:04 agis_schedconf.cvmfs.json
[2024-05-20 05:27:08] -rw------- 1 boinc boinc         0 May 20 03:04 agis_ddmendpoints.agis.ALL.json
[2024-05-20 05:27:08] -rw------- 1 boinc boinc   1324701 May 20 03:04 cric_ddmendpoints.json
[2024-05-20 05:27:08] drwx------ 4 boinc boinc      4096 May 20 03:04 pilot3
[2024-05-20 05:27:08] -rw------- 1 boinc boinc        95 May 20 05:26 pilot_heartbeat.json
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc       530 May 20 05:26 boinc_task_state.xml
[2024-05-20 05:27:08] -rw------- 1 boinc boinc 230747979 May 20 05:26 HITS.38776104._007048.pool.root.1
[2024-05-20 05:27:08] -rw------- 1 boinc boinc      1039 May 20 05:26 memory_monitor_summary.json
[2024-05-20 05:27:08] -rw------- 1 boinc boinc    291288 May 20 05:26 log.38776104._007048.job.log.tgz.1
[2024-05-20 05:27:08] -rw------- 1 boinc boinc      7713 May 20 05:26 heartbeat.json
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc      8192 May 20 05:26 boinc_mmap_file
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc        27 May 20 05:26 wrapper_checkpoint.txt
[2024-05-20 05:27:08] -rw------- 1 boinc boinc      4294 May 20 05:27 pilotlog.txt
[2024-05-20 05:27:08] -rw------- 1 boinc boinc    871241 May 20 05:27 log.38776104._007048.job.log.1
[2024-05-20 05:27:08] -rw------- 1 boinc boinc       357 May 20 05:27 output.list
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc       620 May 20 05:27 runtime_log
[2024-05-20 05:27:08] -rw------- 1 boinc boinc   1177600 May 20 05:27 result.tar.gz
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc     11409 May 20 05:27 runtime_log.err
[2024-05-20 05:27:08] -rw------- 1 boinc boinc       654 May 20 05:27 JDfLDm0gWR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmaYOKDm4Lksym.diag
[2024-05-20 05:27:08] -rw-r--r-- 1 boinc boinc     21266 May 20 05:27 stderr.txt
[2024-05-20 05:27:08] HITS file was successfully produced:
[2024-05-20 05:27:08] -rw------- 1 boinc boinc 230747979 May 20 05:26 shared/HITS.pool.root.1
[2024-05-20 05:27:08]  *** Contents of shared directory: ***
[2024-05-20 05:27:08] total 810500
[2024-05-20 05:27:08] -rw-r--r-- 2 boinc boinc 597508150 May 20 03:04 ATLAS.root_0
[2024-05-20 05:27:08] -rw-r--r-- 2 boinc boinc     17537 May 20 03:04 start_atlas.sh
[2024-05-20 05:27:08] -rw-r--r-- 2 boinc boinc    480006 May 20 03:04 input.tar.gz
[2024-05-20 05:27:08] -rw------- 1 boinc boinc 230747979 May 20 05:26 HITS.pool.root.1
[2024-05-20 05:27:08] -rw------- 1 boinc boinc   1177600 May 20 05:27 result.tar.gz
05:27:10 (1079494): run_atlas exited; CPU time 31179.936578
05:27:10 (1079494): called boinc_finish(0)

</stderr_txt>
]]>

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