Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:31:58 (2990789): wrapper (7.7.26015): starting
10:31:58 (2990789): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 10:31:58] Arguments: --nthreads 4
[2024-05-19 10:31:58] Threads: 4
[2024-05-19 10:31:58] Checking for CVMFS
[2024-05-19 10:31:58] No cvmfs_config command found, will try listing directly
[2024-05-19 10:31:58] CVMFS is ok
[2024-05-19 10:31:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 10:31:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 10:31:58] Further information can be found at the LHC@home message board.
[2024-05-19 10:31:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 10:31:58] Checking for apptainer binary...
[2024-05-19 10:31:58] which: no apptainer in ((null))
[2024-05-19 10:31:58] apptainer is not installed, using version from CVMFS
[2024-05-19 10:31:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 10:31:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-19 10:31:59] apptainer works
[2024-05-19 10:31:59] Set ATHENA_PROC_NUMBER=4
[2024-05-19 10:31:59] Set ATHENA_CORE_NUMBER=4
[2024-05-19 10:31:59] Starting ATLAS job with PandaID=6206854459
[2024-05-19 10:31:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 12:53:41]  *** The last 200 lines of the pilot log: ***
[2024-05-19 12:53:41] 2024-05-19 10:53:19,296 | INFO     | model: linear, x: [1716107563.0, 1716107624.0, 1716107685.0, 1716107746.0, 1716107807.0, 1716107868.0, 1716107929.0, 1716107990.0, 1716108051.0, 1716108112.0, 1716
[2024-05-19 12:53:41] 2024-05-19 10:53:19,296 | INFO     | sum of square deviations: 832722590.0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,297 | INFO     | sum of deviations: 49803672284.0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,297 | INFO     | mean x: 1716111772.0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,297 | INFO     | mean y: 2226843.2086330936
[2024-05-19 12:53:41] 2024-05-19 10:53:19,297 | INFO     | -- intersect: -102635397404.98491
[2024-05-19 12:53:41] 2024-05-19 10:53:19,297 | INFO     | intersect: -102635397404.98491
[2024-05-19 12:53:41] 2024-05-19 10:53:19,297 | INFO     | chi2: 4.930409629610793
[2024-05-19 12:53:41] 2024-05-19 10:53:19,297 | INFO     | model: linear, x: [1716107563.0, 1716107624.0, 1716107685.0, 1716107746.0, 1716107807.0, 1716107868.0, 1716107929.0, 1716107990.0, 1716108051.0, 1716108112.0, 1716
[2024-05-19 12:53:41] 2024-05-19 10:53:19,297 | INFO     | sum of square deviations: 746051197.5
[2024-05-19 12:53:41] 2024-05-19 10:53:19,297 | INFO     | sum of deviations: 56511251620.99999
[2024-05-19 12:53:41] 2024-05-19 10:53:19,298 | INFO     | mean x: 1716111619.5
[2024-05-19 12:53:41] 2024-05-19 10:53:19,298 | INFO     | mean y: 2238192.895522388
[2024-05-19 12:53:41] 2024-05-19 10:53:19,298 | INFO     | -- intersect: -129988325275.4867
[2024-05-19 12:53:41] 2024-05-19 10:53:19,298 | INFO     | intersect: -129988325275.4867
[2024-05-19 12:53:41] 2024-05-19 10:53:19,298 | INFO     | chi2: 4.131569103829829
[2024-05-19 12:53:41] 2024-05-19 10:53:19,298 | INFO     | current chi2=4.131569103829829 (change=16.20231554358749 %)
[2024-05-19 12:53:41] 2024-05-19 10:53:19,298 | INFO     | right removable region: 133
[2024-05-19 12:53:41] 2024-05-19 10:53:19,298 | INFO     | model: linear, x: [1716107868.0, 1716107929.0, 1716107990.0, 1716108051.0, 1716108112.0, 1716108173.0, 1716108234.0, 1716108295.0, 1716108356.0, 1716108417.0, 1716
[2024-05-19 12:53:41] 2024-05-19 10:53:19,298 | INFO     | sum of square deviations: 746051197.5
[2024-05-19 12:53:41] 2024-05-19 10:53:19,298 | INFO     | sum of deviations: 18387288956.500008
[2024-05-19 12:53:41] 2024-05-19 10:53:19,298 | INFO     | mean x: 1716111924.5
[2024-05-19 12:53:41] 2024-05-19 10:53:19,298 | INFO     | mean y: 2281903.7537313434
[2024-05-19 12:53:41] 2024-05-19 10:53:19,299 | INFO     | -- intersect: -42293268245.10429
[2024-05-19 12:53:41] 2024-05-19 10:53:19,299 | INFO     | intersect: -42293268245.10429
[2024-05-19 12:53:41] 2024-05-19 10:53:19,299 | INFO     | chi2: 2.393670943089596
[2024-05-19 12:53:41] 2024-05-19 10:53:19,299 | INFO     | current chi2=2.393670943089596 (change=51.45087076104562 %)
[2024-05-19 12:53:41] 2024-05-19 10:53:19,299 | INFO     | model: linear, x: [1716108173.0, 1716108234.0, 1716108295.0, 1716108356.0, 1716108417.0, 1716108478.0, 1716108539.0, 1716108600.0, 1716108661.0, 1716108722.0, 1716
[2024-05-19 12:53:41] 2024-05-19 10:53:19,299 | INFO     | sum of square deviations: 665612480.0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,299 | INFO     | sum of deviations: -6882229413.0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,299 | INFO     | mean x: 1716112077.0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,299 | INFO     | mean y: 2329826.472868217
[2024-05-19 12:53:41] 2024-05-19 10:53:19,299 | INFO     | -- intersect: 17746403694.09915
[2024-05-19 12:53:41] 2024-05-19 10:53:19,299 | INFO     | intersect: 17746403694.09915
[2024-05-19 12:53:41] 2024-05-19 10:53:19,300 | INFO     | chi2: 0.8835586254161227
[2024-05-19 12:53:41] 2024-05-19 10:53:19,300 | INFO     | current chi2=0.8835586254161227 (change=63.08771562912978 %)
[2024-05-19 12:53:41] 2024-05-19 10:53:19,300 | INFO     | model: linear, x: [1716108478.0, 1716108539.0, 1716108600.0, 1716108661.0, 1716108722.0, 1716108783.0, 1716108844.0, 1716108905.0, 1716108966.0, 1716109027.0, 1716
[2024-05-19 12:53:41] 2024-05-19 10:53:19,300 | INFO     | sum of square deviations: 591173875.0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,300 | INFO     | sum of deviations: -9049935691.5
[2024-05-19 12:53:41] 2024-05-19 10:53:19,300 | INFO     | mean x: 1716112229.5
[2024-05-19 12:53:41] 2024-05-19 10:53:19,300 | INFO     | mean y: 2334139.7983870967
[2024-05-19 12:53:41] 2024-05-19 10:53:19,300 | INFO     | -- intersect: 26273294297.45368
[2024-05-19 12:53:41] 2024-05-19 10:53:19,300 | INFO     | intersect: 26273294297.45368
[2024-05-19 12:53:41] 2024-05-19 10:53:19,300 | INFO     | chi2: 0.8448319217906409
[2024-05-19 12:53:41] 2024-05-19 10:53:19,300 | INFO     | current chi2=0.8448319217906409 (change=4.383037244103977 %)
[2024-05-19 12:53:41] 2024-05-19 10:53:19,300 | INFO     | left removable region: 30
[2024-05-19 12:53:41] 2024-05-19 10:53:19,301 | INFO     | model: linear, x: [1716109393.0, 1716109454.0, 1716109515.0, 1716109576.0, 1716109637.0, 1716109698.0, 1716109759.0, 1716109820.0, 1716109881.0, 1716109942.0, 1716
[2024-05-19 12:53:41] 2024-05-19 10:53:19,301 | INFO     | sum of square deviations: 338804492.0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,301 | INFO     | sum of deviations: -225273182.99999967
[2024-05-19 12:53:41] 2024-05-19 10:53:19,301 | INFO     | mean x: 1716112504.0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,301 | INFO     | mean y: 2349316.223300971
[2024-05-19 12:53:41] 2024-05-19 10:53:19,301 | INFO     | -- intersect: 1143403036.8515966
[2024-05-19 12:53:41] 2024-05-19 10:53:19,301 | INFO     | intersect: 1143403036.8515966
[2024-05-19 12:53:41] 2024-05-19 10:53:19,301 | INFO     | chi2: 0.0003903832882453663
[2024-05-19 12:53:41] 2024-05-19 10:53:19,301 | INFO     | -- intersect: 1143403036.8515966
[2024-05-19 12:53:41] 2024-05-19 10:53:19,301 | INFO     | current memory leak: -0.66 B/s (using 103 data points, chi2=0.00)
[2024-05-19 12:53:41] 2024-05-19 10:53:19,301 | INFO     | ..............................
[2024-05-19 12:53:41] 2024-05-19 10:53:19,302 | INFO     | . Timing measurements:
[2024-05-19 12:53:41] 2024-05-19 10:53:19,302 | INFO     | . get job = 0 s
[2024-05-19 12:53:41] 2024-05-19 10:53:19,302 | INFO     | . initial setup = 1 s
[2024-05-19 12:53:41] 2024-05-19 10:53:19,302 | INFO     | . payload setup = 6 s
[2024-05-19 12:53:41] 2024-05-19 10:53:19,302 | INFO     | . stage-in = 0 s
[2024-05-19 12:53:41] 2024-05-19 10:53:19,302 | INFO     | . payload execution = 8429 s
[2024-05-19 12:53:41] 2024-05-19 10:53:19,302 | INFO     | . stage-out = 0 s
[2024-05-19 12:53:41] 2024-05-19 10:53:19,302 | INFO     | . log creation = 0 s
[2024-05-19 12:53:41] 2024-05-19 10:53:19,302 | INFO     | ..............................
[2024-05-19 12:53:41] 2024-05-19 10:53:19,667 | INFO     | 
[2024-05-19 12:53:41] 2024-05-19 10:53:19,667 | INFO     | job summary report
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | --------------------------------------------------
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | PanDA job id: 6206854459
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | task id: 38776104
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | errors: (none)
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | pilot state: finished 
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | transexitcode: 0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | exeerrorcode: 0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | exeerrordiag: 
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | exitcode: 0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | exitmsg: OK
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | cpuconsumptiontime: 31058 s
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | nevents: 400
[2024-05-19 12:53:41] 2024-05-19 10:53:19,668 | INFO     | neventsw: 0
[2024-05-19 12:53:41] 2024-05-19 10:53:19,669 | INFO     | pid: 3003381
[2024-05-19 12:53:41] 2024-05-19 10:53:19,669 | INFO     | pgrp: 3003381
[2024-05-19 12:53:41] 2024-05-19 10:53:19,669 | INFO     | corecount: 4
[2024-05-19 12:53:41] 2024-05-19 10:53:19,669 | INFO     | event service: False
[2024-05-19 12:53:41] 2024-05-19 10:53:19,669 | INFO     | sizes: {0: 2392213, 5: 2392419, 11: 2392475, 8439: 2420345, 8441: 2429385, 8447: 2429499}
[2024-05-19 12:53:41] 2024-05-19 10:53:19,669 | INFO     | --------------------------------------------------
[2024-05-19 12:53:41] 2024-05-19 10:53:19,669 | INFO     | 
[2024-05-19 12:53:41] 2024-05-19 10:53:19,669 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/1
[2024-05-19 12:53:41] 2024-05-19 10:53:19,690 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,690 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,690 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,690 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,691 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 12:53:41] 2024-05-19 10:53:19,692 | INFO     | job 6206854459 has completed (purged errors)
[2024-05-19 12:53:41] 2024-05-19 10:53:19,692 | INFO     | overall cleanup function is called
[2024-05-19 12:53:41] 2024-05-19 10:53:20,699 | INFO     | --- collectZombieJob: --- 10, [3003381]
[2024-05-19 12:53:41] 2024-05-19 10:53:20,699 | INFO     | zombie collector waiting for pid 3003381
[2024-05-19 12:53:41] 2024-05-19 10:53:20,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 12:53:41] 2024-05-19 10:53:21,704 | INFO     | collected zombie processes
[2024-05-19 12:53:41] 2024-05-19 10:53:21,704 | INFO     | will now attempt to kill all subprocesses of pid=3003381
[2024-05-19 12:53:41] 2024-05-19 10:53:21,931 | INFO     | process IDs to be killed: [3003381] (in reverse order)
[2024-05-19 12:53:41] 2024-05-19 10:53:22,108 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 12:53:41] 2024-05-19 10:53:22,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 12:53:41] 2024-05-19 10:53:22,129 | INFO     | did not find any defunct processes belonging to 3003381
[2024-05-19 12:53:41] 2024-05-19 10:53:22,144 | INFO     | did not find any defunct processes belonging to 3003381
[2024-05-19 12:53:41] 2024-05-19 10:53:22,144 | INFO     | ready for new job
[2024-05-19 12:53:41] 2024-05-19 10:53:22,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 12:53:41] 2024-05-19 10:53:22,146 | INFO     | *************************************
[2024-05-19 12:53:41] 2024-05-19 10:53:22,146 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 12:53:41] 2024-05-19 10:53:22,146 | INFO     | *************************************
[2024-05-19 12:53:41] 2024-05-19 10:53:22,146 | INFO     | 
[2024-05-19 12:53:41] 2024-05-19 10:53:22,153 | INFO     | architecture information:
[2024-05-19 12:53:41] 2024-05-19 10:53:22,153 | INFO     | executing command: cat /etc/os-release
[2024-05-19 12:53:41] 2024-05-19 10:53:22,172 | INFO     | cat /etc/os-release:
[2024-05-19 12:53:41] NAME="CentOS Linux"
[2024-05-19 12:53:41] VERSION="7 (Core)"
[2024-05-19 12:53:41] ID="centos"
[2024-05-19 12:53:41] ID_LIKE="rhel fedora"
[2024-05-19 12:53:41] VERSION_ID="7"
[2024-05-19 12:53:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 12:53:41] ANSI_COLOR="0;31"
[2024-05-19 12:53:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 12:53:41] HOME_URL="https://www.centos.org/"
[2024-05-19 12:53:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 12:53:41] 
[2024-05-19 12:53:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 12:53:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 12:53:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 12:53:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 12:53:41] 
[2024-05-19 12:53:41] 2024-05-19 10:53:22,172 | INFO     | *************************************
[2024-05-19 12:53:41] 2024-05-19 10:53:22,675 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/1
[2024-05-19 12:53:41] 2024-05-19 10:53:22,695 | INFO     | sufficient remaining disk space (2987857543168 B)
[2024-05-19 12:53:41] 2024-05-19 10:53:22,695 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 12:53:41] 2024-05-19 10:53:22,695 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 12:53:41] 2024-05-19 10:53:22,696 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 12:53:41] 2024-05-19 10:53:22,696 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 12:53:41] 2024-05-19 10:53:22,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 12:53:41] 2024-05-19 10:53:22,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 12:53:41] 2024-05-19 10:53:22,769 | INFO     | all data control threads have been joined
[2024-05-19 12:53:41] 2024-05-19 10:53:23,047 | INFO     | all job control threads have been joined
[2024-05-19 12:53:41] 2024-05-19 10:53:23,119 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-19 12:53:41] 2024-05-19 10:53:23,119 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-19 12:53:41] 2024-05-19 10:53:23,120 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 12:53:41] 2024-05-19 10:53:23,120 | INFO     | will abort loop
[2024-05-19 12:53:41] 2024-05-19 10:53:23,201 | INFO     | all payload control threads have been joined
[2024-05-19 12:53:41] 2024-05-19 10:53:23,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 12:53:41] 2024-05-19 10:53:23,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 12:53:41] 2024-05-19 10:53:23,701 | INFO     | [job] retrieve thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:23,707 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:23,775 | INFO     | [data] control thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:24,052 | INFO     | [job] control thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:24,095 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:24,125 | INFO     | [job] job monitor thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:24,206 | INFO     | [payload] control thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:24,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 12:53:41] 2024-05-19 10:53:24,514 | INFO     | [data] copytool_in thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:24,585 | INFO     | [payload] validate_post thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:24,836 | INFO     | [payload] failed_post thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:25,119 | INFO     | [job] validate thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:25,177 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:25,367 | INFO     | [job] queue monitor thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:25,418 | INFO     | [data] copytool_out thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:27,477 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:33,605 | INFO     | job.realtimelogging is not enabled
[2024-05-19 12:53:41] 2024-05-19 10:53:34,610 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 12:53:41] 2024-05-19 10:53:35,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47784979092544)>', '<ExcThread(monitor, started 47785152444160)>']
[2024-05-19 12:53:41] 2024-05-19 10:53:35,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 12:53:41] 2024-05-19 10:53:35,763 | INFO     | [monitor] control thread has ended
[2024-05-19 12:53:41] 2024-05-19 10:53:40,381 | INFO     | all workflow threads have been joined
[2024-05-19 12:53:41] 2024-05-19 10:53:40,382 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 12:53:41] 2024-05-19 10:53:40,382 | INFO     | traces error code: 0
[2024-05-19 12:53:41] 2024-05-19 10:53:40,382 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 12:53:41] 2024-05-19 10:53:40,465 [wrapper] ==== pilot stdout END ====
[2024-05-19 12:53:41] 2024-05-19 10:53:40,468 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 12:53:41] 2024-05-19 10:53:40,470 [wrapper] pilotpid: 2995686
[2024-05-19 12:53:41] 2024-05-19 10:53:40,472 [wrapper] Pilot exit status: 0
[2024-05-19 12:53:41] 2024-05-19 10:53:40,484 [wrapper] pandaids: 6206854459
[2024-05-19 12:53:41] 2024-05-19 10:53:40,587 [wrapper] cleanup: SIGTERM to supervisor_pilot 3692293 2995687
[2024-05-19 12:53:41] 2024-05-19 10:53:40,590 [wrapper] Test setup, not cleaning
[2024-05-19 12:53:41] 2024-05-19 10:53:40,592 [wrapper] ==== wrapper stdout END ====
[2024-05-19 12:53:41] 2024-05-19 10:53:40,595 [wrapper] ==== wrapper stderr END ====
[2024-05-19 12:53:41] 2024-05-19 10:53:40,599 [wrapper] apfmon messages muted
[2024-05-19 12:53:41]  *** Error codes and diagnostics ***
[2024-05-19 12:53:41]     "exeErrorCode": 0,
[2024-05-19 12:53:41]     "exeErrorDiag": "",
[2024-05-19 12:53:41]     "pilotErrorCode": 0,
[2024-05-19 12:53:41]     "pilotErrorDiag": "",
[2024-05-19 12:53:41]  *** Listing of results directory ***
[2024-05-19 12:53:41] total 824888
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc      5633 May 15 18:11 queuedata.json
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc    467845 May 15 18:11 pilot3.tar.gz
[2024-05-19 12:53:41] -rwx------ 1 boinc boinc     32251 May 15 18:13 runpilot2-wrapper.sh
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc       100 May 19 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 12:53:41] -rwxr-xr-x 1 boinc boinc      7986 May 19 09:50 run_atlas
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc       105 May 19 09:50 job.xml
[2024-05-19 12:53:41] -rw-r--r-- 2 boinc boinc 604520577 May 19 10:31 EVNT.38776100._000281.pool.root.1
[2024-05-19 12:53:41] -rw-r--r-- 2 boinc boinc     17537 May 19 10:31 start_atlas.sh
[2024-05-19 12:53:41] drwxrwx--x 2 boinc boinc      4096 May 19 10:31 shared
[2024-05-19 12:53:41] -rw-r--r-- 2 boinc boinc    480002 May 19 10:31 input.tar.gz
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc         0 May 19 10:31 boinc_lockfile
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc      6646 May 19 10:31 init_data.xml
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc      2640 May 19 10:31 pandaJob.out
[2024-05-19 12:53:41] -rw------- 1 boinc boinc       424 May 19 10:31 setup.sh.local
[2024-05-19 12:53:41] -rw------- 1 boinc boinc   1014045 May 19 10:32 agis_schedconf.cvmfs.json
[2024-05-19 12:53:41] -rw------- 1 boinc boinc         0 May 19 10:32 agis_ddmendpoints.agis.ALL.json
[2024-05-19 12:53:41] -rw------- 1 boinc boinc   1324701 May 19 10:32 cric_ddmendpoints.json
[2024-05-19 12:53:41] drwx------ 4 boinc boinc      4096 May 19 10:32 pilot3
[2024-05-19 12:53:41] -rw------- 1 boinc boinc        95 May 19 12:52 pilot_heartbeat.json
[2024-05-19 12:53:41] -rw------- 1 boinc boinc 234337245 May 19 12:52 HITS.38776104._006935.pool.root.1
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc       530 May 19 12:52 boinc_task_state.xml
[2024-05-19 12:53:41] -rw------- 1 boinc boinc      1037 May 19 12:53 memory_monitor_summary.json
[2024-05-19 12:53:41] -rw------- 1 boinc boinc    276866 May 19 12:53 log.38776104._006935.job.log.tgz.1
[2024-05-19 12:53:41] -rw------- 1 boinc boinc      7713 May 19 12:53 heartbeat.json
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc        27 May 19 12:53 wrapper_checkpoint.txt
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc      8192 May 19 12:53 boinc_mmap_file
[2024-05-19 12:53:41] -rw------- 1 boinc boinc      4604 May 19 12:53 pilotlog.txt
[2024-05-19 12:53:41] -rw------- 1 boinc boinc    869647 May 19 12:53 log.38776104._006935.job.log.1
[2024-05-19 12:53:41] -rw------- 1 boinc boinc       357 May 19 12:53 output.list
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc       620 May 19 12:53 runtime_log
[2024-05-19 12:53:41] -rw------- 1 boinc boinc   1167360 May 19 12:53 result.tar.gz
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc     11428 May 19 12:53 runtime_log.err
[2024-05-19 12:53:41] -rw------- 1 boinc boinc       654 May 19 12:53 eFdKDm4QWR5nsSi4apGgGQJmABFKDmABFKDm4ySLDm3XOKDm6jqOem.diag
[2024-05-19 12:53:41] -rw-r--r-- 1 boinc boinc     21342 May 19 12:53 stderr.txt
[2024-05-19 12:53:41] HITS file was successfully produced:
[2024-05-19 12:53:41] -rw------- 1 boinc boinc 234337245 May 19 12:52 shared/HITS.pool.root.1
[2024-05-19 12:53:41]  *** Contents of shared directory: ***
[2024-05-19 12:53:41] total 820844
[2024-05-19 12:53:41] -rw-r--r-- 2 boinc boinc 604520577 May 19 10:31 ATLAS.root_0
[2024-05-19 12:53:41] -rw-r--r-- 2 boinc boinc     17537 May 19 10:31 start_atlas.sh
[2024-05-19 12:53:41] -rw-r--r-- 2 boinc boinc    480002 May 19 10:31 input.tar.gz
[2024-05-19 12:53:41] -rw------- 1 boinc boinc 234337245 May 19 12:52 HITS.pool.root.1
[2024-05-19 12:53:41] -rw------- 1 boinc boinc   1167360 May 19 12:53 result.tar.gz
12:53:43 (2990789): run_atlas exited; CPU time 30740.796763
12:53:43 (2990789): called boinc_finish(0)

</stderr_txt>
]]>

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