Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:34:04 (3720394): wrapper (7.7.26015): starting
20:34:04 (3720394): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 20:34:04] Arguments: --nthreads 4
[2024-05-19 20:34:04] Threads: 4
[2024-05-19 20:34:04] Checking for CVMFS
[2024-05-19 20:34:04] No cvmfs_config command found, will try listing directly
[2024-05-19 20:34:04] CVMFS is ok
[2024-05-19 20:34:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 20:34:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 20:34:04] Further information can be found at the LHC@home message board.
[2024-05-19 20:34:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 20:34:04] Checking for apptainer binary...
[2024-05-19 20:34:04] which: no apptainer in ((null))
[2024-05-19 20:34:04] apptainer is not installed, using version from CVMFS
[2024-05-19 20:34:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 20:34:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-05-19 20:34:05] apptainer works
[2024-05-19 20:34:05] Set ATHENA_PROC_NUMBER=4
[2024-05-19 20:34:05] Set ATHENA_CORE_NUMBER=4
[2024-05-19 20:34:05] Starting ATLAS job with PandaID=6206829830
[2024-05-19 20:34:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 02:18:33]  *** The last 200 lines of the pilot log: ***
[2024-05-20 02:18:33] 2024-05-20 00:18:18,133 | INFO     | intersect: -24498093404.572033
[2024-05-20 02:18:33] 2024-05-20 00:18:18,133 | INFO     | chi2: 4.144610342565893
[2024-05-20 02:18:33] 2024-05-20 00:18:18,133 | INFO     | model: linear, x: [1716143680.0, 1716143741.0, 1716143802.0, 1716143863.0, 1716143924.0, 1716143985.0, 1716144046.0, 1716144107.0, 1716144168.0, 1716144229.0, 1716
[2024-05-20 02:18:33] 2024-05-20 00:18:18,134 | INFO     | sum of square deviations: 11450045382.0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,136 | INFO     | sum of deviations: 168178866600.0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,136 | INFO     | mean x: 1716153806.0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,136 | INFO     | mean y: 2321327.3633633633
[2024-05-20 02:18:33] 2024-05-20 00:18:18,136 | INFO     | -- intersect: -25204635708.639435
[2024-05-20 02:18:33] 2024-05-20 00:18:18,136 | INFO     | intersect: -25204635708.639435
[2024-05-20 02:18:33] 2024-05-20 00:18:18,136 | INFO     | chi2: 4.144745841721474
[2024-05-20 02:18:33] 2024-05-20 00:18:18,136 | INFO     | current chi2=4.144745841721474 (change=-0.003269285756238319 %)
[2024-05-20 02:18:33] 2024-05-20 00:18:18,137 | INFO     | right removable region: 332
[2024-05-20 02:18:33] 2024-05-20 00:18:18,137 | INFO     | model: linear, x: [1716143985.0, 1716144046.0, 1716144107.0, 1716144168.0, 1716144229.0, 1716144290.0, 1716144351.0, 1716144412.0, 1716144473.0, 1716144534.0, 1716
[2024-05-20 02:18:33] 2024-05-20 00:18:18,137 | INFO     | sum of square deviations: 11450045382.0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,139 | INFO     | sum of deviations: 89967403243.0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,139 | INFO     | mean x: 1716154111.0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,139 | INFO     | mean y: 2345678.4744744743
[2024-05-20 02:18:33] 2024-05-20 00:18:18,139 | INFO     | -- intersect: -13482136153.72768
[2024-05-20 02:18:33] 2024-05-20 00:18:18,140 | INFO     | intersect: -13482136153.72768
[2024-05-20 02:18:33] 2024-05-20 00:18:18,140 | INFO     | chi2: 1.6181329227290604
[2024-05-20 02:18:33] 2024-05-20 00:18:18,140 | INFO     | current chi2=1.6181329227290604 (change=60.958141079981765 %)
[2024-05-20 02:18:33] 2024-05-20 00:18:18,140 | INFO     | model: linear, x: [1716144290.0, 1716144351.0, 1716144412.0, 1716144473.0, 1716144534.0, 1716144595.0, 1716144656.0, 1716144717.0, 1716144778.0, 1716144839.0, 1716
[2024-05-20 02:18:33] 2024-05-20 00:18:18,140 | INFO     | sum of square deviations: 10941980042.0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,143 | INFO     | sum of deviations: 23555153660.000004
[2024-05-20 02:18:33] 2024-05-20 00:18:18,143 | INFO     | mean x: 1716154263.5
[2024-05-20 02:18:33] 2024-05-20 00:18:18,143 | INFO     | mean y: 2365613.4695121953
[2024-05-20 02:18:33] 2024-05-20 00:18:18,143 | INFO     | -- intersect: -3692055069.609873
[2024-05-20 02:18:33] 2024-05-20 00:18:18,143 | INFO     | intersect: -3692055069.609873
[2024-05-20 02:18:33] 2024-05-20 00:18:18,143 | INFO     | chi2: 0.057244911798054667
[2024-05-20 02:18:33] 2024-05-20 00:18:18,143 | INFO     | current chi2=0.057244911798054667 (change=96.46228619454152 %)
[2024-05-20 02:18:33] 2024-05-20 00:18:18,144 | INFO     | model: linear, x: [1716144595.0, 1716144656.0, 1716144717.0, 1716144778.0, 1716144839.0, 1716144900.0, 1716144961.0, 1716145022.0, 1716145083.0, 1716145144.0, 1716
[2024-05-20 02:18:33] 2024-05-20 00:18:18,144 | INFO     | sum of square deviations: 10449170802.0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,146 | INFO     | sum of deviations: 13503853406.000002
[2024-05-20 02:18:33] 2024-05-20 00:18:18,146 | INFO     | mean x: 1716154416.0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,146 | INFO     | mean y: 2368704.8730650153
[2024-05-20 02:18:33] 2024-05-20 00:18:18,146 | INFO     | -- intersect: -2215481696.3556952
[2024-05-20 02:18:33] 2024-05-20 00:18:18,146 | INFO     | intersect: -2215481696.3556952
[2024-05-20 02:18:33] 2024-05-20 00:18:18,147 | INFO     | chi2: 0.003409680091792931
[2024-05-20 02:18:33] 2024-05-20 00:18:18,147 | INFO     | current chi2=0.003409680091792931 (change=94.04369753626068 %)
[2024-05-20 02:18:33] 2024-05-20 00:18:18,147 | INFO     | model: linear, x: [1716144900.0, 1716144961.0, 1716145022.0, 1716145083.0, 1716145144.0, 1716145205.0, 1716145266.0, 1716145327.0, 1716145388.0, 1716145449.0, 1716
[2024-05-20 02:18:33] 2024-05-20 00:18:18,147 | INFO     | sum of square deviations: 9971385099.5
[2024-05-20 02:18:33] 2024-05-20 00:18:18,149 | INFO     | sum of deviations: 11843468450.500013
[2024-05-20 02:18:33] 2024-05-20 00:18:18,149 | INFO     | mean x: 1716154568.5
[2024-05-20 02:18:33] 2024-05-20 00:18:18,150 | INFO     | mean y: 2369233.5503144655
[2024-05-20 02:18:33] 2024-05-20 00:18:18,150 | INFO     | -- intersect: -2035985747.7682178
[2024-05-20 02:18:33] 2024-05-20 00:18:18,150 | INFO     | intersect: -2035985747.7682178
[2024-05-20 02:18:33] 2024-05-20 00:18:18,150 | INFO     | chi2: 0.002886452487352652
[2024-05-20 02:18:33] 2024-05-20 00:18:18,150 | INFO     | current chi2=0.002886452487352652 (change=15.345357639260145 %)
[2024-05-20 02:18:33] 2024-05-20 00:18:18,150 | INFO     | left removable region: 40
[2024-05-20 02:18:33] 2024-05-20 00:18:18,150 | INFO     | model: linear, x: [1716146120.0, 1716146181.0, 1716146242.0, 1716146303.0, 1716146364.0, 1716146425.0, 1716146486.0, 1716146547.0, 1716146608.0, 1716146669.0, 1716
[2024-05-20 02:18:33] 2024-05-20 00:18:18,151 | INFO     | sum of square deviations: 7720081493.0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,152 | INFO     | sum of deviations: 12025929240.999998
[2024-05-20 02:18:33] 2024-05-20 00:18:18,152 | INFO     | mean x: 1716154995.5
[2024-05-20 02:18:33] 2024-05-20 00:18:18,153 | INFO     | mean y: 2368881.7260273974
[2024-05-20 02:18:33] 2024-05-20 00:18:18,153 | INFO     | -- intersect: -2670965403.823291
[2024-05-20 02:18:33] 2024-05-20 00:18:18,153 | INFO     | intersect: -2670965403.823291
[2024-05-20 02:18:33] 2024-05-20 00:18:18,153 | INFO     | chi2: 0.0014939169316833573
[2024-05-20 02:18:33] 2024-05-20 00:18:18,153 | INFO     | -- intersect: -2670965403.823291
[2024-05-20 02:18:33] 2024-05-20 00:18:18,153 | INFO     | current memory leak: 1.56 B/s (using 292 data points, chi2=0.00)
[2024-05-20 02:18:33] 2024-05-20 00:18:18,154 | INFO     | ..............................
[2024-05-20 02:18:33] 2024-05-20 00:18:18,154 | INFO     | . Timing measurements:
[2024-05-20 02:18:33] 2024-05-20 00:18:18,154 | INFO     | . get job = 0 s
[2024-05-20 02:18:33] 2024-05-20 00:18:18,154 | INFO     | . initial setup = 1 s
[2024-05-20 02:18:33] 2024-05-20 00:18:18,154 | INFO     | . payload setup = 5 s
[2024-05-20 02:18:33] 2024-05-20 00:18:18,154 | INFO     | . stage-in = 0 s
[2024-05-20 02:18:33] 2024-05-20 00:18:18,154 | INFO     | . payload execution = 20608 s
[2024-05-20 02:18:33] 2024-05-20 00:18:18,154 | INFO     | . stage-out = 0 s
[2024-05-20 02:18:33] 2024-05-20 00:18:18,154 | INFO     | . log creation = 0 s
[2024-05-20 02:18:33] 2024-05-20 00:18:18,154 | INFO     | ..............................
[2024-05-20 02:18:33] 2024-05-20 00:18:18,480 | INFO     | 
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | job summary report
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | --------------------------------------------------
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | PanDA job id: 6206829830
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | task id: 38920995
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | errors: (none)
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | pilot state: finished 
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | transexitcode: 0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | exeerrorcode: 0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | exeerrordiag: 
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | exitcode: 0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | exitmsg: OK
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | cpuconsumptiontime: 79659 s
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | nevents: 400
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | neventsw: 0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,481 | INFO     | pid: 3732559
[2024-05-20 02:18:33] 2024-05-20 00:18:18,482 | INFO     | pgrp: 3732559
[2024-05-20 02:18:33] 2024-05-20 00:18:18,482 | INFO     | corecount: 4
[2024-05-20 02:18:33] 2024-05-20 00:18:18,482 | INFO     | event service: False
[2024-05-20 02:18:33] 2024-05-20 00:18:18,482 | INFO     | sizes: {0: 2390616, 1: 2392163, 5: 2392369, 12: 2392425, 20617: 2425890, 20619: 2434872, 20622: 2435056, 20628: 2435226}
[2024-05-20 02:18:33] 2024-05-20 00:18:18,482 | INFO     | --------------------------------------------------
[2024-05-20 02:18:33] 2024-05-20 00:18:18,482 | INFO     | 
[2024-05-20 02:18:33] 2024-05-20 00:18:18,482 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2024-05-20 02:18:33] 2024-05-20 00:18:18,502 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,504 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 02:18:33] 2024-05-20 00:18:18,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,504 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 02:18:33] 2024-05-20 00:18:18,504 | INFO     | job 6206829830 has completed (purged errors)
[2024-05-20 02:18:33] 2024-05-20 00:18:18,504 | INFO     | overall cleanup function is called
[2024-05-20 02:18:33] 2024-05-20 00:18:19,511 | INFO     | --- collectZombieJob: --- 10, [3732559]
[2024-05-20 02:18:33] 2024-05-20 00:18:19,511 | INFO     | zombie collector waiting for pid 3732559
[2024-05-20 02:18:33] 2024-05-20 00:18:19,512 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 02:18:33] 2024-05-20 00:18:20,516 | INFO     | collected zombie processes
[2024-05-20 02:18:33] 2024-05-20 00:18:20,516 | INFO     | will now attempt to kill all subprocesses of pid=3732559
[2024-05-20 02:18:33] 2024-05-20 00:18:20,727 | INFO     | process IDs to be killed: [3732559] (in reverse order)
[2024-05-20 02:18:33] 2024-05-20 00:18:20,925 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 02:18:33] 2024-05-20 00:18:20,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 02:18:33] 2024-05-20 00:18:20,939 | INFO     | did not find any defunct processes belonging to 3732559
[2024-05-20 02:18:33] 2024-05-20 00:18:20,948 | INFO     | did not find any defunct processes belonging to 3732559
[2024-05-20 02:18:33] 2024-05-20 00:18:20,948 | INFO     | ready for new job
[2024-05-20 02:18:33] 2024-05-20 00:18:20,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 02:18:33] 2024-05-20 00:18:20,950 | INFO     | *************************************
[2024-05-20 02:18:33] 2024-05-20 00:18:20,950 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 02:18:33] 2024-05-20 00:18:20,950 | INFO     | *************************************
[2024-05-20 02:18:33] 2024-05-20 00:18:20,950 | INFO     | 
[2024-05-20 02:18:33] 2024-05-20 00:18:20,955 | INFO     | architecture information:
[2024-05-20 02:18:33] 2024-05-20 00:18:20,955 | INFO     | executing command: cat /etc/os-release
[2024-05-20 02:18:33] 2024-05-20 00:18:20,972 | INFO     | cat /etc/os-release:
[2024-05-20 02:18:33] NAME="CentOS Linux"
[2024-05-20 02:18:33] VERSION="7 (Core)"
[2024-05-20 02:18:33] ID="centos"
[2024-05-20 02:18:33] ID_LIKE="rhel fedora"
[2024-05-20 02:18:33] VERSION_ID="7"
[2024-05-20 02:18:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 02:18:33] ANSI_COLOR="0;31"
[2024-05-20 02:18:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 02:18:33] HOME_URL="https://www.centos.org/"
[2024-05-20 02:18:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 02:18:33] 
[2024-05-20 02:18:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 02:18:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 02:18:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 02:18:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 02:18:33] 
[2024-05-20 02:18:33] 2024-05-20 00:18:20,972 | INFO     | *************************************
[2024-05-20 02:18:33] 2024-05-20 00:18:21,475 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2024-05-20 02:18:33] 2024-05-20 00:18:21,498 | INFO     | sufficient remaining disk space (3011537534976 B)
[2024-05-20 02:18:33] 2024-05-20 00:18:21,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 02:18:33] 2024-05-20 00:18:21,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 02:18:33] 2024-05-20 00:18:21,499 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 02:18:33] 2024-05-20 00:18:21,499 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 02:18:33] 2024-05-20 00:18:21,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 02:18:33] 2024-05-20 00:18:21,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 02:18:33] 2024-05-20 00:18:21,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 02:18:33] 2024-05-20 00:18:21,863 | INFO     | all data control threads have been joined
[2024-05-20 02:18:33] 2024-05-20 00:18:21,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 02:18:33] 2024-05-20 00:18:21,864 | INFO     | aborting loop
[2024-05-20 02:18:33] 2024-05-20 00:18:21,983 | INFO     | all job control threads have been joined
[2024-05-20 02:18:33] 2024-05-20 00:18:22,307 | INFO     | all payload control threads have been joined
[2024-05-20 02:18:33] 2024-05-20 00:18:22,503 | INFO     | [job] retrieve thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:22,511 | INFO     | [data] copytool_in thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:22,555 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:22,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 02:18:33] 2024-05-20 00:18:22,729 | INFO     | [job] validate thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:22,783 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:22,869 | INFO     | [job] job monitor thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:22,870 | INFO     | [data] control thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:22,988 | INFO     | [job] control thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:23,068 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:23,152 | INFO     | [payload] failed_post thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:23,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 02:18:33] 2024-05-20 00:18:23,312 | INFO     | [payload] control thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:23,647 | INFO     | [data] copytool_out thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:23,719 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:23,882 | INFO     | [payload] validate_post thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:24,245 | INFO     | [job] queue monitor thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:26,570 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 02:18:33] 2024-05-20 00:18:27,478 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47461226918976)>', '<ExcThread(monitor, started 47461398169344)>']
[2024-05-20 02:18:33] 2024-05-20 00:18:27,529 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 02:18:33] 2024-05-20 00:18:27,529 | INFO     | [monitor] control thread has ended
[2024-05-20 02:18:33] 2024-05-20 00:18:32,503 | INFO     | all workflow threads have been joined
[2024-05-20 02:18:33] 2024-05-20 00:18:32,503 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 02:18:33] 2024-05-20 00:18:32,503 | INFO     | traces error code: 0
[2024-05-20 02:18:33] 2024-05-20 00:18:32,504 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 02:18:33] 2024-05-20 00:18:32,591 [wrapper] ==== pilot stdout END ====
[2024-05-20 02:18:33] 2024-05-20 00:18:32,594 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 02:18:33] 2024-05-20 00:18:32,596 [wrapper] pilotpid: 3725028
[2024-05-20 02:18:33] 2024-05-20 00:18:32,598 [wrapper] Pilot exit status: 0
[2024-05-20 02:18:33] 2024-05-20 00:18:32,607 [wrapper] pandaids: 6206829830
[2024-05-20 02:18:33] 2024-05-20 00:18:32,702 [wrapper] cleanup: SIGTERM to supervisor_pilot 1069123 3725029
[2024-05-20 02:18:33] 2024-05-20 00:18:32,705 [wrapper] Test setup, not cleaning
[2024-05-20 02:18:33] 2024-05-20 00:18:32,707 [wrapper] ==== wrapper stdout END ====
[2024-05-20 02:18:33] 2024-05-20 00:18:32,709 [wrapper] ==== wrapper stderr END ====
[2024-05-20 02:18:33] 2024-05-20 00:18:32,713 [wrapper] apfmon messages muted
[2024-05-20 02:18:33]  *** Error codes and diagnostics ***
[2024-05-20 02:18:33]     "exeErrorCode": 0,
[2024-05-20 02:18:33]     "exeErrorDiag": "",
[2024-05-20 02:18:33]     "pilotErrorCode": 0,
[2024-05-20 02:18:33]     "pilotErrorDiag": "",
[2024-05-20 02:18:33]  *** Listing of results directory ***
[2024-05-20 02:18:33] total 974812
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc    467845 May 15 17:27 pilot3.tar.gz
[2024-05-20 02:18:33] -rwx------ 1 boinc boinc     32251 May 15 17:28 runpilot2-wrapper.sh
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc      5633 May 15 17:28 queuedata.json
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc       100 May 19 20:26 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 02:18:33] -rwxr-xr-x 1 boinc boinc      7986 May 19 20:26 run_atlas
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc       105 May 19 20:26 job.xml
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc      6644 May 19 20:34 init_data.xml
[2024-05-20 02:18:33] -rw-r--r-- 2 boinc boinc 632220859 May 19 20:34 EVNT.38776180._000155.pool.root.1
[2024-05-20 02:18:33] -rw-r--r-- 2 boinc boinc     17537 May 19 20:34 start_atlas.sh
[2024-05-20 02:18:33] drwxrwx--x 2 boinc boinc      4096 May 19 20:34 shared
[2024-05-20 02:18:33] -rw-r--r-- 2 boinc boinc    479996 May 19 20:34 input.tar.gz
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc         0 May 19 20:34 boinc_lockfile
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc      2613 May 19 20:34 pandaJob.out
[2024-05-20 02:18:33] -rw------- 1 boinc boinc       424 May 19 20:34 setup.sh.local
[2024-05-20 02:18:33] -rw------- 1 boinc boinc   1014069 May 19 20:34 agis_schedconf.cvmfs.json
[2024-05-20 02:18:33] -rw------- 1 boinc boinc   1324701 May 19 20:34 cric_ddmendpoints.json
[2024-05-20 02:18:33] drwx------ 4 boinc boinc      4096 May 19 20:34 pilot3
[2024-05-20 02:18:33] -rw------- 1 boinc boinc 357005933 May 20 02:17 HITS.38920995._003870.pool.root.1
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc       531 May 20 02:17 boinc_task_state.xml
[2024-05-20 02:18:33] -rw------- 1 boinc boinc      1055 May 20 02:18 memory_monitor_summary.json
[2024-05-20 02:18:33] -rw------- 1 boinc boinc        95 May 20 02:18 pilot_heartbeat.json
[2024-05-20 02:18:33] -rw------- 1 boinc boinc         0 May 20 02:18 agis_ddmendpoints.agis.ALL.json
[2024-05-20 02:18:33] -rw------- 1 boinc boinc    429201 May 20 02:18 log.38920995._003870.job.log.tgz.1
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc      8192 May 20 02:18 boinc_mmap_file
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc        28 May 20 02:18 wrapper_checkpoint.txt
[2024-05-20 02:18:33] -rw------- 1 boinc boinc      7720 May 20 02:18 heartbeat.json
[2024-05-20 02:18:33] -rw------- 1 boinc boinc      4345 May 20 02:18 pilotlog.txt
[2024-05-20 02:18:33] -rw------- 1 boinc boinc   2298995 May 20 02:18 log.38920995._003870.job.log.1
[2024-05-20 02:18:33] -rw------- 1 boinc boinc       357 May 20 02:18 output.list
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc       620 May 20 02:18 runtime_log
[2024-05-20 02:18:33] -rw------- 1 boinc boinc   2744320 May 20 02:18 result.tar.gz
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc     11410 May 20 02:18 runtime_log.err
[2024-05-20 02:18:33] -rw------- 1 boinc boinc       658 May 20 02:18 jTjNDmpjVR5nsSi4apGgGQJmABFKDmABFKDm4ySLDm3VOKDmw0KzDm.diag
[2024-05-20 02:18:33] -rw-r--r-- 1 boinc boinc     21386 May 20 02:18 stderr.txt
[2024-05-20 02:18:33] HITS file was successfully produced:
[2024-05-20 02:18:33] -rw------- 1 boinc boinc 357005933 May 20 02:17 shared/HITS.pool.root.1
[2024-05-20 02:18:33]  *** Contents of shared directory: ***
[2024-05-20 02:18:33] total 969224
[2024-05-20 02:18:33] -rw-r--r-- 2 boinc boinc 632220859 May 19 20:34 ATLAS.root_0
[2024-05-20 02:18:33] -rw-r--r-- 2 boinc boinc     17537 May 19 20:34 start_atlas.sh
[2024-05-20 02:18:33] -rw-r--r-- 2 boinc boinc    479996 May 19 20:34 input.tar.gz
[2024-05-20 02:18:33] -rw------- 1 boinc boinc 357005933 May 20 02:17 HITS.pool.root.1
[2024-05-20 02:18:33] -rw------- 1 boinc boinc   2744320 May 20 02:18 result.tar.gz
02:18:35 (3720394): run_atlas exited; CPU time 79224.427405
02:18:35 (3720394): called boinc_finish(0)

</stderr_txt>
]]>

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