Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:06:40 (1561018): wrapper (7.7.26015): starting
08:06:40 (1561018): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 08:06:40] Arguments: --nthreads 4
[2024-05-20 08:06:40] Threads: 4
[2024-05-20 08:06:40] Checking for CVMFS
[2024-05-20 08:06:40] No cvmfs_config command found, will try listing directly
[2024-05-20 08:06:40] CVMFS is ok
[2024-05-20 08:06:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 08:06:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 08:06:40] Further information can be found at the LHC@home message board.
[2024-05-20 08:06:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 08:06:40] Checking for apptainer binary...
[2024-05-20 08:06:40] which: no apptainer in ((null))
[2024-05-20 08:06:40] apptainer is not installed, using version from CVMFS
[2024-05-20 08:06:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 08:06:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2024-05-20 08:06:41] apptainer works
[2024-05-20 08:06:41] Set ATHENA_PROC_NUMBER=4
[2024-05-20 08:06:41] Set ATHENA_CORE_NUMBER=4
[2024-05-20 08:06:41] Starting ATLAS job with PandaID=6206829815
[2024-05-20 08:06:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 14:56:59]  *** The last 200 lines of the pilot log: ***
[2024-05-20 14:56:59] 2024-05-20 12:56:43,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 14:56:59] 2024-05-20 12:56:43,718 | INFO     | fitting pss+swap vs Time
[2024-05-20 14:56:59] 2024-05-20 12:56:43,718 | INFO     | model: linear, x: [1716185231.0, 1716185292.0, 1716185353.0, 1716185414.0, 1716185475.0, 1716185536.0, 1716185597.0, 1716185658.0, 1716185719.0, 1716185780.0, 1716
[2024-05-20 14:56:59] 2024-05-20 12:56:43,719 | INFO     | sum of square deviations: 20295085642.0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,721 | INFO     | sum of deviations: 169963457102.0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,721 | INFO     | mean x: 1716197492.0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,721 | INFO     | mean y: 2322271.8089330024
[2024-05-20 14:56:59] 2024-05-20 12:56:43,722 | INFO     | -- intersect: -14370164937.92511
[2024-05-20 14:56:59] 2024-05-20 12:56:43,722 | INFO     | intersect: -14370164937.92511
[2024-05-20 14:56:59] 2024-05-20 12:56:43,722 | INFO     | chi2: 5.1629032526111125
[2024-05-20 14:56:59] 2024-05-20 12:56:43,722 | INFO     | model: linear, x: [1716185231.0, 1716185292.0, 1716185353.0, 1716185414.0, 1716185475.0, 1716185536.0, 1716185597.0, 1716185658.0, 1716185719.0, 1716185780.0, 1716
[2024-05-20 14:56:59] 2024-05-20 12:56:43,722 | INFO     | sum of square deviations: 19549015839.5
[2024-05-20 14:56:59] 2024-05-20 12:56:43,725 | INFO     | sum of deviations: 194323679886.49994
[2024-05-20 14:56:59] 2024-05-20 12:56:43,725 | INFO     | mean x: 1716197339.5
[2024-05-20 14:56:59] 2024-05-20 12:56:43,725 | INFO     | mean y: 2327195.8969849246
[2024-05-20 14:56:59] 2024-05-20 12:56:43,725 | INFO     | -- intersect: -17057241692.94743
[2024-05-20 14:56:59] 2024-05-20 12:56:43,725 | INFO     | intersect: -17057241692.94743
[2024-05-20 14:56:59] 2024-05-20 12:56:43,725 | INFO     | chi2: 4.308281740188738
[2024-05-20 14:56:59] 2024-05-20 12:56:43,726 | INFO     | current chi2=4.308281740188738 (change=16.553118867570372 %)
[2024-05-20 14:56:59] 2024-05-20 12:56:43,726 | INFO     | right removable region: 397
[2024-05-20 14:56:59] 2024-05-20 12:56:43,726 | INFO     | model: linear, x: [1716185536.0, 1716185597.0, 1716185658.0, 1716185719.0, 1716185780.0, 1716185841.0, 1716185902.0, 1716185963.0, 1716186024.0, 1716186085.0, 1716
[2024-05-20 14:56:59] 2024-05-20 12:56:43,726 | INFO     | sum of square deviations: 19549015839.5
[2024-05-20 14:56:59] 2024-05-20 12:56:43,728 | INFO     | sum of deviations: 72092469451.50003
[2024-05-20 14:56:59] 2024-05-20 12:56:43,728 | INFO     | mean x: 1716197644.5
[2024-05-20 14:56:59] 2024-05-20 12:56:43,729 | INFO     | mean y: 2342249.5351758795
[2024-05-20 14:56:59] 2024-05-20 12:56:43,729 | INFO     | -- intersect: -6326617084.001127
[2024-05-20 14:56:59] 2024-05-20 12:56:43,729 | INFO     | intersect: -6326617084.001127
[2024-05-20 14:56:59] 2024-05-20 12:56:43,729 | INFO     | chi2: 2.5850919853486296
[2024-05-20 14:56:59] 2024-05-20 12:56:43,729 | INFO     | current chi2=2.5850919853486296 (change=49.92949007825718 %)
[2024-05-20 14:56:59] 2024-05-20 12:56:43,729 | INFO     | model: linear, x: [1716185841.0, 1716185902.0, 1716185963.0, 1716186024.0, 1716186085.0, 1716186146.0, 1716186207.0, 1716186268.0, 1716186329.0, 1716186390.0, 1716
[2024-05-20 14:56:59] 2024-05-20 12:56:43,730 | INFO     | sum of square deviations: 18821458012.0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,732 | INFO     | sum of deviations: -7270935382.0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,732 | INFO     | mean x: 1716197797.0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,732 | INFO     | mean y: 2358886.368956743
[2024-05-20 14:56:59] 2024-05-20 12:56:43,732 | INFO     | -- intersect: 665344892.9132913
[2024-05-20 14:56:59] 2024-05-20 12:56:43,732 | INFO     | intersect: 665344892.9132913
[2024-05-20 14:56:59] 2024-05-20 12:56:43,732 | INFO     | chi2: 1.0142247357854202
[2024-05-20 14:56:59] 2024-05-20 12:56:43,733 | INFO     | current chi2=1.0142247357854202 (change=60.76639664918383 %)
[2024-05-20 14:56:59] 2024-05-20 12:56:43,733 | INFO     | model: linear, x: [1716186146.0, 1716186207.0, 1716186268.0, 1716186329.0, 1716186390.0, 1716186451.0, 1716186512.0, 1716186573.0, 1716186634.0, 1716186695.0, 1716
[2024-05-20 14:56:59] 2024-05-20 12:56:43,733 | INFO     | sum of square deviations: 18112179597.0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,735 | INFO     | sum of deviations: -25773322768.0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,735 | INFO     | mean x: 1716197949.5
[2024-05-20 14:56:59] 2024-05-20 12:56:43,735 | INFO     | mean y: 2362849.8608247424
[2024-05-20 14:56:59] 2024-05-20 12:56:43,736 | INFO     | -- intersect: 2444483272.163264
[2024-05-20 14:56:59] 2024-05-20 12:56:43,736 | INFO     | intersect: 2444483272.163264
[2024-05-20 14:56:59] 2024-05-20 12:56:43,736 | INFO     | chi2: 0.8960932376931917
[2024-05-20 14:56:59] 2024-05-20 12:56:43,736 | INFO     | current chi2=0.8960932376931917 (change=11.647467659201476 %)
[2024-05-20 14:56:59] 2024-05-20 12:56:43,736 | INFO     | left removable region: 30
[2024-05-20 14:56:59] 2024-05-20 12:56:43,736 | INFO     | model: linear, x: [1716187061.0, 1716187122.0, 1716187183.0, 1716187244.0, 1716187305.0, 1716187366.0, 1716187427.0, 1716187488.0, 1716187549.0, 1716187610.0, 1716
[2024-05-20 14:56:59] 2024-05-20 12:56:43,736 | INFO     | sum of square deviations: 15327572968.0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,738 | INFO     | sum of deviations: 1152561998.9999976
[2024-05-20 14:56:59] 2024-05-20 12:56:43,739 | INFO     | mean x: 1716198224.0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,739 | INFO     | mean y: 2368192.697547684
[2024-05-20 14:56:59] 2024-05-20 12:56:43,739 | INFO     | -- intersect: -126681909.35470083
[2024-05-20 14:56:59] 2024-05-20 12:56:43,739 | INFO     | intersect: -126681909.35470083
[2024-05-20 14:56:59] 2024-05-20 12:56:43,739 | INFO     | chi2: 0.009449440766267629
[2024-05-20 14:56:59] 2024-05-20 12:56:43,739 | INFO     | -- intersect: -126681909.35470083
[2024-05-20 14:56:59] 2024-05-20 12:56:43,739 | INFO     | current memory leak: 0.08 B/s (using 367 data points, chi2=0.01)
[2024-05-20 14:56:59] 2024-05-20 12:56:43,740 | INFO     | ..............................
[2024-05-20 14:56:59] 2024-05-20 12:56:43,740 | INFO     | . Timing measurements:
[2024-05-20 14:56:59] 2024-05-20 12:56:43,740 | INFO     | . get job = 0 s
[2024-05-20 14:56:59] 2024-05-20 12:56:43,740 | INFO     | . initial setup = 1 s
[2024-05-20 14:56:59] 2024-05-20 12:56:43,740 | INFO     | . payload setup = 4 s
[2024-05-20 14:56:59] 2024-05-20 12:56:43,740 | INFO     | . stage-in = 0 s
[2024-05-20 14:56:59] 2024-05-20 12:56:43,740 | INFO     | . payload execution = 24565 s
[2024-05-20 14:56:59] 2024-05-20 12:56:43,740 | INFO     | . stage-out = 1 s
[2024-05-20 14:56:59] 2024-05-20 12:56:43,740 | INFO     | . log creation = 0 s
[2024-05-20 14:56:59] 2024-05-20 12:56:43,740 | INFO     | ..............................
[2024-05-20 14:56:59] 2024-05-20 12:56:43,800 | INFO     | 
[2024-05-20 14:56:59] 2024-05-20 12:56:43,801 | INFO     | job summary report
[2024-05-20 14:56:59] 2024-05-20 12:56:43,807 | WARNING  | process 1572070 is no longer using CPU - aborting
[2024-05-20 14:56:59] 2024-05-20 12:56:43,807 | INFO     | --------------------------------------------------
[2024-05-20 14:56:59] 2024-05-20 12:56:43,808 | INFO     | aborting job monitoring since job object (job id=6206829815) has expired
[2024-05-20 14:56:59] 2024-05-20 12:56:43,808 | INFO     | PanDA job id: 6206829815
[2024-05-20 14:56:59] 2024-05-20 12:56:43,808 | INFO     | task id: 38920995
[2024-05-20 14:56:59] 2024-05-20 12:56:43,808 | INFO     | errors: (none)
[2024-05-20 14:56:59] 2024-05-20 12:56:43,808 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 14:56:59] 2024-05-20 12:56:43,808 | INFO     | pilot state: finished 
[2024-05-20 14:56:59] 2024-05-20 12:56:43,809 | INFO     | transexitcode: 0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,809 | INFO     | exeerrorcode: 0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,809 | INFO     | exeerrordiag: 
[2024-05-20 14:56:59] 2024-05-20 12:56:43,809 | INFO     | exitcode: 0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,809 | INFO     | exitmsg: OK
[2024-05-20 14:56:59] 2024-05-20 12:56:43,809 | INFO     | cpuconsumptiontime: 94896 s
[2024-05-20 14:56:59] 2024-05-20 12:56:43,809 | INFO     | nevents: 400
[2024-05-20 14:56:59] 2024-05-20 12:56:43,809 | INFO     | neventsw: 0
[2024-05-20 14:56:59] 2024-05-20 12:56:43,809 | INFO     | pid: 1572070
[2024-05-20 14:56:59] 2024-05-20 12:56:43,809 | INFO     | pgrp: 1572070
[2024-05-20 14:56:59] 2024-05-20 12:56:43,810 | INFO     | corecount: 4
[2024-05-20 14:56:59] 2024-05-20 12:56:43,810 | INFO     | event service: False
[2024-05-20 14:56:59] 2024-05-20 12:56:43,810 | INFO     | sizes: {0: 2392134, 4: 2392340, 11: 2392368, 24573: 2428048, 24575: 2437086, 24581: 2437200}
[2024-05-20 14:56:59] 2024-05-20 12:56:43,810 | INFO     | --------------------------------------------------
[2024-05-20 14:56:59] 2024-05-20 12:56:43,810 | INFO     | 
[2024-05-20 14:56:59] 2024-05-20 12:56:43,810 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/1
[2024-05-20 14:56:59] 2024-05-20 12:56:43,826 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,827 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,827 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,827 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,828 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,828 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,828 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,828 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,828 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,829 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 14:56:59] 2024-05-20 12:56:43,829 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,829 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 14:56:59] 2024-05-20 12:56:43,829 | INFO     | job 6206829815 has completed (purged errors)
[2024-05-20 14:56:59] 2024-05-20 12:56:43,829 | INFO     | overall cleanup function is called
[2024-05-20 14:56:59] 2024-05-20 12:56:44,837 | INFO     | --- collectZombieJob: --- 10, [1572070]
[2024-05-20 14:56:59] 2024-05-20 12:56:44,837 | INFO     | zombie collector waiting for pid 1572070
[2024-05-20 14:56:59] 2024-05-20 12:56:44,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 14:56:59] 2024-05-20 12:56:45,843 | INFO     | collected zombie processes
[2024-05-20 14:56:59] 2024-05-20 12:56:45,843 | INFO     | will now attempt to kill all subprocesses of pid=1572070
[2024-05-20 14:56:59] 2024-05-20 12:56:45,958 | INFO     | process IDs to be killed: [1572070] (in reverse order)
[2024-05-20 14:56:59] 2024-05-20 12:56:46,043 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 14:56:59] 2024-05-20 12:56:46,043 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 14:56:59] 2024-05-20 12:56:46,047 | INFO     | did not find any defunct processes belonging to 1572070
[2024-05-20 14:56:59] 2024-05-20 12:56:46,050 | INFO     | did not find any defunct processes belonging to 1572070
[2024-05-20 14:56:59] 2024-05-20 12:56:46,050 | INFO     | ready for new job
[2024-05-20 14:56:59] 2024-05-20 12:56:46,050 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 14:56:59] 2024-05-20 12:56:46,052 | INFO     | *************************************
[2024-05-20 14:56:59] 2024-05-20 12:56:46,052 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 14:56:59] 2024-05-20 12:56:46,052 | INFO     | *************************************
[2024-05-20 14:56:59] 2024-05-20 12:56:46,052 | INFO     | 
[2024-05-20 14:56:59] 2024-05-20 12:56:46,054 | INFO     | architecture information:
[2024-05-20 14:56:59] 2024-05-20 12:56:46,054 | INFO     | executing command: cat /etc/os-release
[2024-05-20 14:56:59] 2024-05-20 12:56:46,067 | INFO     | cat /etc/os-release:
[2024-05-20 14:56:59] NAME="CentOS Linux"
[2024-05-20 14:56:59] VERSION="7 (Core)"
[2024-05-20 14:56:59] ID="centos"
[2024-05-20 14:56:59] ID_LIKE="rhel fedora"
[2024-05-20 14:56:59] VERSION_ID="7"
[2024-05-20 14:56:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 14:56:59] ANSI_COLOR="0;31"
[2024-05-20 14:56:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 14:56:59] HOME_URL="https://www.centos.org/"
[2024-05-20 14:56:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 14:56:59] 
[2024-05-20 14:56:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 14:56:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 14:56:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 14:56:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 14:56:59] 
[2024-05-20 14:56:59] 2024-05-20 12:56:46,067 | INFO     | *************************************
[2024-05-20 14:56:59] 2024-05-20 12:56:46,570 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/1
[2024-05-20 14:56:59] 2024-05-20 12:56:46,589 | INFO     | sufficient remaining disk space (1625533972480 B)
[2024-05-20 14:56:59] 2024-05-20 12:56:46,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 14:56:59] 2024-05-20 12:56:46,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 14:56:59] 2024-05-20 12:56:46,726 | INFO     | all data control threads have been joined
[2024-05-20 14:56:59] 2024-05-20 12:56:46,943 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 14:56:59] 2024-05-20 12:56:46,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 14:56:59] 2024-05-20 12:56:46,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 14:56:59] 2024-05-20 12:56:47,178 | INFO     | all payload control threads have been joined
[2024-05-20 14:56:59] 2024-05-20 12:56:47,182 | INFO     | all job control threads have been joined
[2024-05-20 14:56:59] 2024-05-20 12:56:47,316 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 14:56:59] 2024-05-20 12:56:47,316 | INFO     | aborting loop
[2024-05-20 14:56:59] 2024-05-20 12:56:47,596 | INFO     | [job] retrieve thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:47,638 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:47,639 | INFO     | [payload] failed_post thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:47,731 | INFO     | [data] control thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:47,735 | INFO     | [job] validate thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:47,838 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 14:56:59] 2024-05-20 12:56:48,063 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:48,167 | INFO     | [payload] validate_post thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:48,184 | INFO     | [payload] control thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:48,187 | INFO     | [job] control thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:48,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 14:56:59] 2024-05-20 12:56:48,321 | INFO     | [job] job monitor thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:48,411 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:48,718 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:48,732 | INFO     | [data] copytool_in thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:48,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 14:56:59] 2024-05-20 12:56:49,816 | INFO     | [job] queue monitor thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:49,844 | INFO     | [data] copytool_out thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:52,214 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 14:56:59] 2024-05-20 12:56:54,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47303588430912)>', '<ExcThread(monitor, started 47303761782528)>']
[2024-05-20 14:56:59] 2024-05-20 12:56:54,984 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 14:56:59] 2024-05-20 12:56:54,985 | INFO     | [monitor] control thread has ended
[2024-05-20 14:56:59] 2024-05-20 12:56:59,082 | INFO     | all workflow threads have been joined
[2024-05-20 14:56:59] 2024-05-20 12:56:59,083 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 14:56:59] 2024-05-20 12:56:59,083 | INFO     | traces error code: 0
[2024-05-20 14:56:59] 2024-05-20 12:56:59,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 14:56:59] 2024-05-20 12:56:59,171 [wrapper] ==== pilot stdout END ====
[2024-05-20 14:56:59] 2024-05-20 12:56:59,174 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 14:56:59] 2024-05-20 12:56:59,177 [wrapper] pilotpid: 1565223
[2024-05-20 14:56:59] 2024-05-20 12:56:59,180 [wrapper] Pilot exit status: 0
[2024-05-20 14:56:59] 2024-05-20 12:56:59,187 [wrapper] pandaids: 6206829815
[2024-05-20 14:56:59] 2024-05-20 12:56:59,227 [wrapper] cleanup: SIGTERM to supervisor_pilot 2080014 1565224
[2024-05-20 14:56:59] 2024-05-20 12:56:59,231 [wrapper] Test setup, not cleaning
[2024-05-20 14:56:59] 2024-05-20 12:56:59,234 [wrapper] ==== wrapper stdout END ====
[2024-05-20 14:56:59] 2024-05-20 12:56:59,236 [wrapper] ==== wrapper stderr END ====
[2024-05-20 14:56:59] 2024-05-20 12:56:59,242 [wrapper] apfmon messages muted
[2024-05-20 14:56:59]  *** Error codes and diagnostics ***
[2024-05-20 14:56:59]     "exeErrorCode": 0,
[2024-05-20 14:56:59]     "exeErrorDiag": "",
[2024-05-20 14:56:59]     "pilotErrorCode": 0,
[2024-05-20 14:56:59]     "pilotErrorDiag": "",
[2024-05-20 14:56:59]  *** Listing of results directory ***
[2024-05-20 14:56:59] total 975336
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc    467845 May 15 17:27 pilot3.tar.gz
[2024-05-20 14:56:59] -rwx------ 1 boinc boinc     32251 May 15 17:28 runpilot2-wrapper.sh
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc      5633 May 15 17:28 queuedata.json
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc       100 May 20 08:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 14:56:59] -rwxr-xr-x 1 boinc boinc      7986 May 20 08:06 run_atlas
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc       105 May 20 08:06 job.xml
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc      6457 May 20 08:06 init_data.xml
[2024-05-20 14:56:59] -rw-r--r-- 2 boinc boinc 632220859 May 20 08:06 EVNT.38776180._000155.pool.root.1
[2024-05-20 14:56:59] drwxrwx--x 2 boinc boinc      4096 May 20 08:06 shared
[2024-05-20 14:56:59] -rw-r--r-- 2 boinc boinc    479992 May 20 08:06 input.tar.gz
[2024-05-20 14:56:59] -rw-r--r-- 2 boinc boinc     17537 May 20 08:06 start_atlas.sh
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc         0 May 20 08:06 boinc_lockfile
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc      2612 May 20 08:06 pandaJob.out
[2024-05-20 14:56:59] -rw------- 1 boinc boinc       424 May 20 08:06 setup.sh.local
[2024-05-20 14:56:59] -rw------- 1 boinc boinc   1013883 May 20 08:06 agis_schedconf.cvmfs.json
[2024-05-20 14:56:59] -rw------- 1 boinc boinc   1324701 May 20 08:06 cric_ddmendpoints.json
[2024-05-20 14:56:59] drwx------ 4 boinc boinc      4096 May 20 08:06 pilot3
[2024-05-20 14:56:59] -rw------- 1 boinc boinc        95 May 20 14:55 pilot_heartbeat.json
[2024-05-20 14:56:59] -rw------- 1 boinc boinc 356400944 May 20 14:55 HITS.38920995._003855.pool.root.1
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc       532 May 20 14:55 boinc_task_state.xml
[2024-05-20 14:56:59] -rw------- 1 boinc boinc      1051 May 20 14:56 memory_monitor_summary.json
[2024-05-20 14:56:59] -rw------- 1 boinc boinc         0 May 20 14:56 agis_ddmendpoints.agis.ALL.json
[2024-05-20 14:56:59] -rw------- 1 boinc boinc    459321 May 20 14:56 log.38920995._003855.job.log.tgz.1
[2024-05-20 14:56:59] -rw------- 1 boinc boinc      7769 May 20 14:56 heartbeat.json
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc      8192 May 20 14:56 boinc_mmap_file
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc        28 May 20 14:56 wrapper_checkpoint.txt
[2024-05-20 14:56:59] -rw------- 1 boinc boinc      4222 May 20 14:56 pilotlog.txt
[2024-05-20 14:56:59] -rw------- 1 boinc boinc   2837487 May 20 14:56 log.38920995._003855.job.log.1
[2024-05-20 14:56:59] -rw------- 1 boinc boinc       357 May 20 14:56 output.list
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc       620 May 20 14:56 runtime_log
[2024-05-20 14:56:59] -rw------- 1 boinc boinc   3317760 May 20 14:56 result.tar.gz
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc     11410 May 20 14:56 runtime_log.err
[2024-05-20 14:56:59] -rw------- 1 boinc boinc       660 May 20 14:56 Sc0MDmKjVR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmjYJKDmrjnSkn.diag
[2024-05-20 14:56:59] -rw-r--r-- 1 boinc boinc     21317 May 20 14:56 stderr.txt
[2024-05-20 14:56:59] HITS file was successfully produced:
[2024-05-20 14:56:59] -rw------- 1 boinc boinc 356400944 May 20 14:55 shared/HITS.pool.root.1
[2024-05-20 14:56:59]  *** Contents of shared directory: ***
[2024-05-20 14:56:59] total 969192
[2024-05-20 14:56:59] -rw-r--r-- 2 boinc boinc 632220859 May 20 08:06 ATLAS.root_0
[2024-05-20 14:56:59] -rw-r--r-- 2 boinc boinc    479992 May 20 08:06 input.tar.gz
[2024-05-20 14:56:59] -rw-r--r-- 2 boinc boinc     17537 May 20 08:06 start_atlas.sh
[2024-05-20 14:56:59] -rw------- 1 boinc boinc 356400944 May 20 14:55 HITS.pool.root.1
[2024-05-20 14:56:59] -rw------- 1 boinc boinc   3317760 May 20 14:56 result.tar.gz
14:57:01 (1561018): run_atlas exited; CPU time 94152.416951
14:57:01 (1561018): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN