Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:04:48 (68657): wrapper (7.7.26015): starting
15:04:48 (68657): wrapper: running run_atlas (--nthreads 8)
[2024-05-15 15:04:48] Arguments: --nthreads 8
[2024-05-15 15:04:48] Threads: 8
[2024-05-15 15:04:48] Checking for CVMFS
[2024-05-15 15:04:49] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 15:04:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 15:04:49] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 15:04:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 15:04:51] 2.11.2.0 66440 2135 111500 132771 2 210 17563064 18432000 28675 130560 0 12899752 98.959 24050927 38024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-15 15:04:51] CVMFS is ok
[2024-05-15 15:04:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 15:04:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 15:04:51] Further information can be found at the LHC@home message board.
[2024-05-15 15:04:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 15:04:51] Checking for apptainer binary...
[2024-05-15 15:04:51] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 15:04:51] Running /usr/bin/apptainer --version
[2024-05-15 15:04:51] apptainer version 1.3.0-1.el7
[2024-05-15 15:04:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 15:05:22] c6-12-29-2.aglt2.org
[2024-05-15 15:05:22] apptainer works
[2024-05-15 15:05:22] Set ATHENA_PROC_NUMBER=8
[2024-05-15 15:05:22] Set ATHENA_CORE_NUMBER=8
[2024-05-15 15:05:22] Starting ATLAS job with PandaID=6206829127
[2024-05-15 15:05:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 19:37:39]  *** The last 200 lines of the pilot log: ***
[2024-05-15 19:37:39] 2024-05-15 23:37:18,101 | INFO     | current chi2=11.370073406356736 (change=12.197395144134681 %)
[2024-05-15 19:37:39] 2024-05-15 23:37:18,101 | INFO     | right removable region: 253
[2024-05-15 19:37:39] 2024-05-15 23:37:18,101 | INFO     | model: linear, x: [1715800670.0, 1715800731.0, 1715800792.0, 1715800853.0, 1715800914.0, 1715800975.0, 1715801036.0, 1715801097.0, 1715801158.0, 1715801219.0, 1715
[2024-05-15 19:37:39] 2024-05-15 23:37:18,102 | INFO     | sum of square deviations: 5081429693.468501
[2024-05-15 19:37:39] 2024-05-15 23:37:18,110 | INFO     | sum of deviations: 155093855493.2361
[2024-05-15 19:37:39] 2024-05-15 23:37:18,110 | INFO     | mean x: 1715808386.6259842
[2024-05-15 19:37:39] 2024-05-15 23:37:18,110 | INFO     | mean y: 2423380.05511811
[2024-05-15 19:37:39] 2024-05-15 23:37:18,110 | INFO     | -- intersect: -52366959652.34294
[2024-05-15 19:37:39] 2024-05-15 23:37:18,110 | INFO     | intersect: -52366959652.34294
[2024-05-15 19:37:39] 2024-05-15 23:37:18,111 | INFO     | chi2: 7.878134504138103
[2024-05-15 19:37:39] 2024-05-15 23:37:18,111 | INFO     | current chi2=7.878134504138103 (change=39.163037374809576 %)
[2024-05-15 19:37:39] 2024-05-15 23:37:18,111 | INFO     | model: linear, x: [1715800975.0, 1715801036.0, 1715801097.0, 1715801158.0, 1715801219.0, 1715801280.0, 1715801341.0, 1715801402.0, 1715801463.0, 1715801524.0, 1715
[2024-05-15 19:37:39] 2024-05-15 23:37:18,112 | INFO     | sum of square deviations: 4787209765.887532
[2024-05-15 19:37:39] 2024-05-15 23:37:18,119 | INFO     | sum of deviations: 89260031645.04016
[2024-05-15 19:37:39] 2024-05-15 23:37:18,120 | INFO     | mean x: 1715808539.128514
[2024-05-15 19:37:39] 2024-05-15 23:37:18,120 | INFO     | mean y: 2457459.81124498
[2024-05-15 19:37:39] 2024-05-15 23:37:18,120 | INFO     | -- intersect: -31989690782.94436
[2024-05-15 19:37:39] 2024-05-15 23:37:18,120 | INFO     | intersect: -31989690782.94436
[2024-05-15 19:37:39] 2024-05-15 23:37:18,120 | INFO     | chi2: 5.226920470946713
[2024-05-15 19:37:39] 2024-05-15 23:37:18,121 | INFO     | current chi2=5.226920470946713 (change=33.65281503887502 %)
[2024-05-15 19:37:39] 2024-05-15 23:37:18,121 | INFO     | model: linear, x: [1715801280.0, 1715801341.0, 1715801402.0, 1715801463.0, 1715801524.0, 1715801585.0, 1715801646.0, 1715801708.0, 1715801768.0, 1715801829.0, 1715
[2024-05-15 19:37:39] 2024-05-15 23:37:18,121 | INFO     | sum of square deviations: 4504571450.80329
[2024-05-15 19:37:39] 2024-05-15 23:37:18,123 | INFO     | sum of deviations: 37945215463.311356
[2024-05-15 19:37:39] 2024-05-15 23:37:18,123 | INFO     | mean x: 1715808691.6311476
[2024-05-15 19:37:39] 2024-05-15 23:37:18,123 | INFO     | mean y: 2485141.9590163934
[2024-05-15 19:37:39] 2024-05-15 23:37:18,123 | INFO     | -- intersect: -14450994219.80267
[2024-05-15 19:37:39] 2024-05-15 23:37:18,123 | INFO     | intersect: -14450994219.80267
[2024-05-15 19:37:39] 2024-05-15 23:37:18,124 | INFO     | chi2: 3.675817472891408
[2024-05-15 19:37:39] 2024-05-15 23:37:18,128 | INFO     | current chi2=3.675817472891408 (change=29.675274507751702 %)
[2024-05-15 19:37:39] 2024-05-15 23:37:18,128 | INFO     | model: linear, x: [1715801585.0, 1715801646.0, 1715801708.0, 1715801768.0, 1715801829.0, 1715801890.0, 1715801951.0, 1715802012.0, 1715802073.0, 1715802134.0, 1715
[2024-05-15 19:37:39] 2024-05-15 23:37:18,129 | INFO     | sum of square deviations: 4233282185.7154813
[2024-05-15 19:37:39] 2024-05-15 23:37:18,131 | INFO     | sum of deviations: -13005324940.887028
[2024-05-15 19:37:39] 2024-05-15 23:37:18,131 | INFO     | mean x: 1715808844.133891
[2024-05-15 19:37:39] 2024-05-15 23:37:18,131 | INFO     | mean y: 2513786.6527196653
[2024-05-15 19:37:39] 2024-05-15 23:37:18,131 | INFO     | -- intersect: 5273755006.930021
[2024-05-15 19:37:39] 2024-05-15 23:37:18,131 | INFO     | intersect: 5273755006.930021
[2024-05-15 19:37:39] 2024-05-15 23:37:18,131 | INFO     | chi2: 2.138053350635868
[2024-05-15 19:37:39] 2024-05-15 23:37:18,131 | INFO     | current chi2=2.138053350635868 (change=41.83461593499447 %)
[2024-05-15 19:37:39] 2024-05-15 23:37:18,132 | INFO     | model: linear, x: [1715801890.0, 1715801951.0, 1715802012.0, 1715802073.0, 1715802134.0, 1715802195.0, 1715802256.0, 1715802317.0, 1715802378.0, 1715802439.0, 1715
[2024-05-15 19:37:39] 2024-05-15 23:37:18,132 | INFO     | sum of square deviations: 3973123986.393166
[2024-05-15 19:37:39] 2024-05-15 23:37:18,139 | INFO     | sum of deviations: -35391111744.36752
[2024-05-15 19:37:39] 2024-05-15 23:37:18,139 | INFO     | mean x: 1715808996.6324787
[2024-05-15 19:37:39] 2024-05-15 23:37:18,139 | INFO     | mean y: 2526853.9957264955
[2024-05-15 19:37:39] 2024-05-15 23:37:18,139 | INFO     | -- intersect: 15286315665.96715
[2024-05-15 19:37:39] 2024-05-15 23:37:18,139 | INFO     | intersect: 15286315665.96715
[2024-05-15 19:37:39] 2024-05-15 23:37:18,140 | INFO     | chi2: 1.7898040461699765
[2024-05-15 19:37:39] 2024-05-15 23:37:18,140 | INFO     | current chi2=1.7898040461699765 (change=16.28814848620688 %)
[2024-05-15 19:37:39] 2024-05-15 23:37:18,140 | INFO     | left removable region: 50
[2024-05-15 19:37:39] 2024-05-15 23:37:18,140 | INFO     | model: linear, x: [1715803415.0, 1715803476.0, 1715803537.0, 1715803598.0, 1715803659.0, 1715803720.0, 1715803781.0, 1715803842.0, 1715803903.0, 1715803964.0, 1715
[2024-05-15 19:37:39] 2024-05-15 23:37:18,140 | INFO     | sum of square deviations: 2593997584.1379423
[2024-05-15 19:37:39] 2024-05-15 23:37:18,145 | INFO     | sum of deviations: -3933676979.7586184
[2024-05-15 19:37:39] 2024-05-15 23:37:18,145 | INFO     | mean x: 1715809576.137931
[2024-05-15 19:37:39] 2024-05-15 23:37:18,145 | INFO     | mean y: 2547357.669950739
[2024-05-15 19:37:39] 2024-05-15 23:37:18,145 | INFO     | -- intersect: 2604492969.560796
[2024-05-15 19:37:39] 2024-05-15 23:37:18,145 | INFO     | intersect: 2604492969.560796
[2024-05-15 19:37:39] 2024-05-15 23:37:18,146 | INFO     | chi2: 0.005045440427997197
[2024-05-15 19:37:39] 2024-05-15 23:37:18,146 | INFO     | -- intersect: 2604492969.560796
[2024-05-15 19:37:39] 2024-05-15 23:37:18,146 | INFO     | current memory leak: -1.52 B/s (using 203 data points, chi2=0.01)
[2024-05-15 19:37:39] 2024-05-15 23:37:18,147 | INFO     | ..............................
[2024-05-15 19:37:39] 2024-05-15 23:37:18,147 | INFO     | . Timing measurements:
[2024-05-15 19:37:39] 2024-05-15 23:37:18,147 | INFO     | . get job = 0 s
[2024-05-15 19:37:39] 2024-05-15 23:37:18,147 | INFO     | . initial setup = 6 s
[2024-05-15 19:37:39] 2024-05-15 23:37:18,147 | INFO     | . payload setup = 90 s
[2024-05-15 19:37:39] 2024-05-15 23:37:18,147 | INFO     | . stage-in = 0 s
[2024-05-15 19:37:39] 2024-05-15 23:37:18,147 | INFO     | . payload execution = 15882 s
[2024-05-15 19:37:39] 2024-05-15 23:37:18,147 | INFO     | . stage-out = 12 s
[2024-05-15 19:37:39] 2024-05-15 23:37:18,147 | INFO     | . log creation = 1 s
[2024-05-15 19:37:39] 2024-05-15 23:37:18,147 | INFO     | ..............................
[2024-05-15 19:37:39] 2024-05-15 23:37:18,327 | INFO     | 
[2024-05-15 19:37:39] 2024-05-15 23:37:18,327 | INFO     | job summary report
[2024-05-15 19:37:39] 2024-05-15 23:37:18,327 | INFO     | --------------------------------------------------
[2024-05-15 19:37:39] 2024-05-15 23:37:18,327 | INFO     | PanDA job id: 6206829127
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | task id: 38776104
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | errors: (none)
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | pilot state: finished 
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | transexitcode: 0
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | exeerrorcode: 0
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | exeerrordiag: 
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | exitcode: 0
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | exitmsg: OK
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | cpuconsumptiontime: 46461 s
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | nevents: 400
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | neventsw: 0
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | pid: 192842
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | pgrp: 192842
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | corecount: 8
[2024-05-15 19:37:39] 2024-05-15 23:37:18,328 | INFO     | event service: False
[2024-05-15 19:37:39] 2024-05-15 23:37:18,329 | INFO     | sizes: {0: 2391244, 1: 2392008, 2: 2392207, 13: 2392207, 24: 2392263, 35: 2392291, 46: 2392447, 57: 2392475, 59: 2392709, 68: 2392737, 15980: 2424097, 15981: 24243
[2024-05-15 19:37:39] 2024-05-15 23:37:18,329 | INFO     | --------------------------------------------------
[2024-05-15 19:37:39] 2024-05-15 23:37:18,329 | INFO     | 
[2024-05-15 19:37:39] 2024-05-15 23:37:18,329 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2024-05-15 19:37:39] 2024-05-15 23:37:18,658 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,658 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,658 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,658 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,660 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 19:37:39] 2024-05-15 23:37:18,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,660 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 19:37:39] 2024-05-15 23:37:18,660 | INFO     | job 6206829127 has completed (purged errors)
[2024-05-15 19:37:39] 2024-05-15 23:37:18,660 | INFO     | overall cleanup function is called
[2024-05-15 19:37:39] 2024-05-15 23:37:18,725 | INFO     | 16182s have passed since pilot start
[2024-05-15 19:37:39] 2024-05-15 23:37:19,697 | INFO     | --- collectZombieJob: --- 10, [192842]
[2024-05-15 19:37:39] 2024-05-15 23:37:19,697 | INFO     | zombie collector waiting for pid 192842
[2024-05-15 19:37:39] 2024-05-15 23:37:19,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 19:37:39] 2024-05-15 23:37:20,703 | INFO     | collected zombie processes
[2024-05-15 19:37:39] 2024-05-15 23:37:20,703 | INFO     | will now attempt to kill all subprocesses of pid=192842
[2024-05-15 19:37:39] 2024-05-15 23:37:21,511 | INFO     | process IDs to be killed: [192842] (in reverse order)
[2024-05-15 19:37:39] 2024-05-15 23:37:23,203 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 19:37:39] 2024-05-15 23:37:23,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 19:37:39] 2024-05-15 23:37:23,623 | INFO     | did not find any defunct processes belonging to 192842
[2024-05-15 19:37:39] 2024-05-15 23:37:23,737 | INFO     | did not find any defunct processes belonging to 192842
[2024-05-15 19:37:39] 2024-05-15 23:37:23,738 | INFO     | ready for new job
[2024-05-15 19:37:39] 2024-05-15 23:37:23,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 19:37:39] 2024-05-15 23:37:23,759 | INFO     | *************************************
[2024-05-15 19:37:39] 2024-05-15 23:37:23,759 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 19:37:39] 2024-05-15 23:37:23,759 | INFO     | *************************************
[2024-05-15 19:37:39] 2024-05-15 23:37:23,759 | INFO     | 
[2024-05-15 19:37:39] 2024-05-15 23:37:23,770 | INFO     | architecture information:
[2024-05-15 19:37:39] 2024-05-15 23:37:23,779 | INFO     | executing command: cat /etc/os-release
[2024-05-15 19:37:39] 2024-05-15 23:37:23,881 | INFO     | cat /etc/os-release:
[2024-05-15 19:37:39] NAME="CentOS Linux"
[2024-05-15 19:37:39] VERSION="7 (Core)"
[2024-05-15 19:37:39] ID="centos"
[2024-05-15 19:37:39] ID_LIKE="rhel fedora"
[2024-05-15 19:37:39] VERSION_ID="7"
[2024-05-15 19:37:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 19:37:39] ANSI_COLOR="0;31"
[2024-05-15 19:37:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 19:37:39] HOME_URL="https://www.centos.org/"
[2024-05-15 19:37:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 19:37:39] 
[2024-05-15 19:37:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 19:37:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 19:37:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 19:37:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 19:37:39] 
[2024-05-15 19:37:39] 2024-05-15 23:37:23,881 | INFO     | *************************************
[2024-05-15 19:37:39] 2024-05-15 23:37:24,416 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2024-05-15 19:37:39] 2024-05-15 23:37:24,558 | INFO     | sufficient remaining disk space (99089383424 B)
[2024-05-15 19:37:39] 2024-05-15 23:37:24,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 19:37:39] 2024-05-15 23:37:24,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 19:37:39] 2024-05-15 23:37:24,560 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 19:37:39] 2024-05-15 23:37:24,561 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 19:37:39] 2024-05-15 23:37:24,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 19:37:39] 2024-05-15 23:37:24,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 19:37:39] 2024-05-15 23:37:24,851 | INFO     | all payload control threads have been joined
[2024-05-15 19:37:39] 2024-05-15 23:37:24,862 | INFO     | all data control threads have been joined
[2024-05-15 19:37:39] 2024-05-15 23:37:25,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 19:37:39] 2024-05-15 23:37:25,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 19:37:39] 2024-05-15 23:37:25,195 | INFO     | aborting loop
[2024-05-15 19:37:39] 2024-05-15 23:37:25,415 | INFO     | all job control threads have been joined
[2024-05-15 19:37:39] 2024-05-15 23:37:25,564 | INFO     | [job] retrieve thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:25,687 | INFO     | [data] copytool_in thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:25,691 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:25,704 | INFO     | [job] validate thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:25,857 | INFO     | [payload] control thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:25,868 | INFO     | [data] control thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:26,007 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 19:37:39] 2024-05-15 23:37:26,201 | INFO     | [job] job monitor thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:26,241 | INFO     | [payload] validate_post thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:26,246 | INFO     | [payload] failed_post thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:26,320 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:26,321 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:26,321 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:26,421 | INFO     | [job] control thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:27,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 19:37:39] 2024-05-15 23:37:28,014 | INFO     | [data] copytool_out thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:28,400 | INFO     | [job] queue monitor thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:29,055 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 19:37:39] 2024-05-15 23:37:29,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325544187712)>', '<ExcThread(monitor, started 140325263746816)>']
[2024-05-15 19:37:39] 2024-05-15 23:37:30,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 19:37:39] 2024-05-15 23:37:30,596 | INFO     | [monitor] control thread has ended
[2024-05-15 19:37:39] 2024-05-15 23:37:34,697 | INFO     | all workflow threads have been joined
[2024-05-15 19:37:39] 2024-05-15 23:37:34,697 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 19:37:39] 2024-05-15 23:37:34,698 | INFO     | traces error code: 0
[2024-05-15 19:37:39] 2024-05-15 23:37:34,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 19:37:39] 2024-05-15 23:37:36,009 [wrapper] ==== pilot stdout END ====
[2024-05-15 19:37:39] 2024-05-15 23:37:36,013 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 19:37:39] 2024-05-15 23:37:36,016 [wrapper] pilotpid: 126159
[2024-05-15 19:37:39] 2024-05-15 23:37:36,021 [wrapper] Pilot exit status: 0
[2024-05-15 19:37:39] 2024-05-15 23:37:36,285 [wrapper] pandaids: 6206829127
[2024-05-15 19:37:39] 2024-05-15 23:37:37,066 [wrapper] cleanup: SIGTERM to supervisor_pilot 164286 126160
[2024-05-15 19:37:39] 2024-05-15 23:37:37,113 [wrapper] Test setup, not cleaning
[2024-05-15 19:37:39] 2024-05-15 23:37:37,149 [wrapper] ==== wrapper stdout END ====
[2024-05-15 19:37:39] 2024-05-15 23:37:37,206 [wrapper] ==== wrapper stderr END ====
[2024-05-15 19:37:39] 2024-05-15 23:37:37,298 [wrapper] apfmon messages muted
[2024-05-15 19:37:39]  *** Error codes and diagnostics ***
[2024-05-15 19:37:39]     "exeErrorCode": 0,
[2024-05-15 19:37:39]     "exeErrorDiag": "",
[2024-05-15 19:37:39]     "pilotErrorCode": 0,
[2024-05-15 19:37:39]     "pilotErrorDiag": "",
[2024-05-15 19:37:39]  *** Listing of results directory ***
[2024-05-15 19:37:39] total 816752
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas    467845 May 15 10:51 pilot3.tar.gz
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas      5633 May 15 11:07 queuedata.json
[2024-05-15 19:37:39] -rwx------ 1 boincer umatlas     32251 May 15 11:08 runpilot2-wrapper.sh
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas       100 May 15 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 19:37:39] -rwxr-xr-x 1 boincer umatlas      7986 May 15 15:04 run_atlas
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas       105 May 15 15:04 job.xml
[2024-05-15 19:37:39] -rw-r--r-- 2 boincer umatlas 598394522 May 15 15:04 EVNT.38776100._000262.pool.root.1
[2024-05-15 19:37:39] -rw-r--r-- 2 boincer umatlas     17537 May 15 15:04 start_atlas.sh
[2024-05-15 19:37:39] drwxrwx--x 2 boincer umatlas      4096 May 15 15:04 shared
[2024-05-15 19:37:39] -rw-r--r-- 2 boincer umatlas    480006 May 15 15:04 input.tar.gz
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas         0 May 15 15:04 boinc_lockfile
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas      2640 May 15 15:05 pandaJob.out
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas       424 May 15 15:05 setup.sh.local
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas   1011265 May 15 15:07 agis_schedconf.cvmfs.json
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas   1324701 May 15 15:07 cric_ddmendpoints.json
[2024-05-15 19:37:39] drwx------ 4 boincer umatlas      4096 May 15 15:07 pilot3
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas 230394601 May 15 19:33 HITS.38776104._006551.pool.root.1
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas       532 May 15 19:33 boinc_task_state.xml
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas      1072 May 15 19:35 memory_monitor_summary.json
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas         0 May 15 19:36 agis_ddmendpoints.agis.ALL.json
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas    438294 May 15 19:36 log.38776104._006551.job.log.tgz.1
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas        95 May 15 19:37 pilot_heartbeat.json
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas      7796 May 15 19:37 heartbeat.json
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas      6301 May 15 19:37 init_data.xml
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas      8192 May 15 19:37 boinc_mmap_file
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas        28 May 15 19:37 wrapper_checkpoint.txt
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas      4334 May 15 19:37 pilotlog.txt
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas   1580500 May 15 19:37 log.38776104._006551.job.log.1
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas       357 May 15 19:37 output.list
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas       620 May 15 19:37 runtime_log
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas   2037760 May 15 19:37 result.tar.gz
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas     11010 May 15 19:37 runtime_log.err
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas       653 May 15 19:37 f8pKDmKQVR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmLUOKDmeoaTRn.diag
[2024-05-15 19:37:39] -rw-r--r-- 1 boincer umatlas     21715 May 15 19:37 stderr.txt
[2024-05-15 19:37:39] HITS file was successfully produced:
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas 230394601 May 15 19:33 shared/HITS.pool.root.1
[2024-05-15 19:37:39]  *** Contents of shared directory: ***
[2024-05-15 19:37:39] total 811860
[2024-05-15 19:37:39] -rw-r--r-- 2 boincer umatlas 598394522 May 15 15:04 ATLAS.root_0
[2024-05-15 19:37:39] -rw-r--r-- 2 boincer umatlas     17537 May 15 15:04 start_atlas.sh
[2024-05-15 19:37:39] -rw-r--r-- 2 boincer umatlas    480006 May 15 15:04 input.tar.gz
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas 230394601 May 15 19:33 HITS.pool.root.1
[2024-05-15 19:37:39] -rw------- 1 boincer umatlas   2037760 May 15 19:37 result.tar.gz
19:37:41 (68657): run_atlas exited; CPU time 46099.927218
19:37:41 (68657): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN