Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
05:38:31 (16903): wrapper (7.7.26015): starting
05:38:31 (16903): wrapper: running run_atlas (--nthreads 12)
[2024-05-16 05:38:31] Arguments: --nthreads 12
[2024-05-16 05:38:31] Threads: 12
[2024-05-16 05:38:31] Checking for CVMFS
[2024-05-16 05:38:31] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 05:38:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 05:38:32] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 05:38:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 05:38:32] 2.9.2.0 165920 181940 100448 132799 0 98 44632824 45568000 7229 130560 0 618886347 99.780 414292630 14119 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-16 05:38:32] CVMFS is ok
[2024-05-16 05:38:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 05:38:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 05:38:32] Further information can be found at the LHC@home message board.
[2024-05-16 05:38:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 05:38:32] Checking for apptainer binary...
[2024-05-16 05:38:32] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 05:38:32] Running /usr/bin/apptainer --version
[2024-05-16 05:38:32] apptainer version 1.1.8-1.el7
[2024-05-16 05:38:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 05:38:33] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0038.triumf.lcg
[2024-05-16 05:38:33] apptainer works
[2024-05-16 05:38:33] Set ATHENA_PROC_NUMBER=12
[2024-05-16 05:38:33] Set ATHENA_CORE_NUMBER=12
[2024-05-16 05:38:33] Starting ATLAS job with PandaID=6206814486
[2024-05-16 05:38:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 09:03:14]  *** The last 200 lines of the pilot log: ***
[2024-05-16 09:03:14] 2024-05-16 16:02:53,508 | INFO     | current chi2=5.2310189232453235 (change=-0.0540395302219398 %)
[2024-05-16 09:03:14] 2024-05-16 16:02:53,508 | INFO     | right removable region: 194
[2024-05-16 09:03:14] 2024-05-16 16:02:53,508 | INFO     | model: linear, x: [1715863464.0, 1715863525.0, 1715863586.0, 1715863647.0, 1715863708.0, 1715863769.0, 1715863830.0, 1715863891.0, 1715863952.0, 1715864013.0, 1715
[2024-05-16 09:03:14] 2024-05-16 16:02:53,508 | INFO     | sum of square deviations: 2299096396.687188
[2024-05-16 09:03:14] 2024-05-16 16:02:53,508 | INFO     | sum of deviations: 58471542114.251305
[2024-05-16 09:03:14] 2024-05-16 16:02:53,509 | INFO     | mean x: 1715869381.0820513
[2024-05-16 09:03:14] 2024-05-16 16:02:53,509 | INFO     | mean y: 2699897.671794872
[2024-05-16 09:03:14] 2024-05-16 16:02:53,509 | INFO     | -- intersect: -43635978725.39952
[2024-05-16 09:03:14] 2024-05-16 16:02:53,509 | INFO     | intersect: -43635978725.39952
[2024-05-16 09:03:14] 2024-05-16 16:02:53,509 | INFO     | chi2: 2.4470900739202324
[2024-05-16 09:03:14] 2024-05-16 16:02:53,509 | INFO     | current chi2=2.4470900739202324 (change=53.19434882905581 %)
[2024-05-16 09:03:14] 2024-05-16 16:02:53,509 | INFO     | model: linear, x: [1715863769.0, 1715863830.0, 1715863891.0, 1715863952.0, 1715864013.0, 1715864074.0, 1715864135.0, 1715864196.0, 1715864257.0, 1715864318.0, 1715
[2024-05-16 09:03:14] 2024-05-16 16:02:53,509 | INFO     | sum of square deviations: 2126725494.1526353
[2024-05-16 09:03:14] 2024-05-16 16:02:53,510 | INFO     | sum of deviations: 15094068588.41053
[2024-05-16 09:03:14] 2024-05-16 16:02:53,510 | INFO     | mean x: 1715869533.5842106
[2024-05-16 09:03:14] 2024-05-16 16:02:53,510 | INFO     | mean y: 2738279.5368421054
[2024-05-16 09:03:14] 2024-05-16 16:02:53,510 | INFO     | -- intersect: -12175350759.172567
[2024-05-16 09:03:14] 2024-05-16 16:02:53,510 | INFO     | intersect: -12175350759.172567
[2024-05-16 09:03:14] 2024-05-16 16:02:53,510 | INFO     | chi2: 0.9011047888480501
[2024-05-16 09:03:14] 2024-05-16 16:02:53,510 | INFO     | current chi2=0.9011047888480501 (change=63.176476483169154 %)
[2024-05-16 09:03:14] 2024-05-16 16:02:53,510 | INFO     | model: linear, x: [1715864074.0, 1715864135.0, 1715864196.0, 1715864257.0, 1715864318.0, 1715864379.0, 1715864440.0, 1715864501.0, 1715864562.0, 1715864623.0, 1715
[2024-05-16 09:03:14] 2024-05-16 16:02:53,510 | INFO     | sum of square deviations: 1963191966.6162124
[2024-05-16 09:03:14] 2024-05-16 16:02:53,511 | INFO     | sum of deviations: -10965004849.486494
[2024-05-16 09:03:14] 2024-05-16 16:02:53,511 | INFO     | mean x: 1715869686.0864866
[2024-05-16 09:03:14] 2024-05-16 16:02:53,511 | INFO     | mean y: 2762394.4054054054
[2024-05-16 09:03:14] 2024-05-16 16:02:53,511 | INFO     | -- intersect: 9586399526.669239
[2024-05-16 09:03:14] 2024-05-16 16:02:53,511 | INFO     | intersect: 9586399526.669239
[2024-05-16 09:03:14] 2024-05-16 16:02:53,511 | INFO     | chi2: 0.1636174095007114
[2024-05-16 09:03:14] 2024-05-16 16:02:53,511 | INFO     | current chi2=0.1636174095007114 (change=81.84257685392218 %)
[2024-05-16 09:03:14] 2024-05-16 16:02:53,512 | INFO     | model: linear, x: [1715864379.0, 1715864440.0, 1715864501.0, 1715864562.0, 1715864623.0, 1715864684.0, 1715864747.0, 1715864806.0, 1715864867.0, 1715864930.0, 1715
[2024-05-16 09:03:14] 2024-05-16 16:02:53,512 | INFO     | sum of square deviations: 1808263251.5777714
[2024-05-16 09:03:14] 2024-05-16 16:02:53,512 | INFO     | sum of deviations: -15736980360.17778
[2024-05-16 09:03:14] 2024-05-16 16:02:53,512 | INFO     | mean x: 1715869838.588889
[2024-05-16 09:03:14] 2024-05-16 16:02:53,512 | INFO     | mean y: 2767006.511111111
[2024-05-16 09:03:14] 2024-05-16 16:02:53,512 | INFO     | -- intersect: 14935664595.915785
[2024-05-16 09:03:14] 2024-05-16 16:02:53,512 | INFO     | intersect: 14935664595.915785
[2024-05-16 09:03:14] 2024-05-16 16:02:53,513 | INFO     | chi2: 0.10009030212830926
[2024-05-16 09:03:14] 2024-05-16 16:02:53,513 | INFO     | current chi2=0.10009030212830926 (change=38.82661849143012 %)
[2024-05-16 09:03:14] 2024-05-16 16:02:53,513 | INFO     | model: linear, x: [1715864684.0, 1715864747.0, 1715864806.0, 1715864867.0, 1715864930.0, 1715864989.0, 1715865050.0, 1715865111.0, 1715865172.0, 1715865233.0, 1715
[2024-05-16 09:03:14] 2024-05-16 16:02:53,513 | INFO     | sum of square deviations: 1661706786.537146
[2024-05-16 09:03:14] 2024-05-16 16:02:53,513 | INFO     | sum of deviations: -10937306801.651432
[2024-05-16 09:03:14] 2024-05-16 16:02:53,513 | INFO     | mean x: 1715869991.0914285
[2024-05-16 09:03:14] 2024-05-16 16:02:53,514 | INFO     | mean y: 2762004.165714286
[2024-05-16 09:03:14] 2024-05-16 16:02:53,514 | INFO     | -- intersect: 11296569477.518261
[2024-05-16 09:03:14] 2024-05-16 16:02:53,514 | INFO     | intersect: 11296569477.518261
[2024-05-16 09:03:14] 2024-05-16 16:02:53,514 | INFO     | chi2: 0.08881542734586918
[2024-05-16 09:03:14] 2024-05-16 16:02:53,514 | INFO     | current chi2=0.08881542734586918 (change=11.264702516320131 %)
[2024-05-16 09:03:14] 2024-05-16 16:02:53,514 | INFO     | left removable region: 50
[2024-05-16 09:03:14] 2024-05-16 16:02:53,514 | INFO     | model: linear, x: [1715866215.0, 1715866270.0, 1715866331.0, 1715866392.0, 1715866453.0, 1715866514.0, 1715866575.0, 1715866636.0, 1715866697.0, 1715866758.0, 1715
[2024-05-16 09:03:14] 2024-05-16 16:02:53,514 | INFO     | sum of square deviations: 925803815.1597219
[2024-05-16 09:03:14] 2024-05-16 16:02:53,515 | INFO     | sum of deviations: 3102207042.3611107
[2024-05-16 09:03:14] 2024-05-16 16:02:53,515 | INFO     | mean x: 1715870570.5763888
[2024-05-16 09:03:14] 2024-05-16 16:02:53,515 | INFO     | mean y: 2744887.6944444445
[2024-05-16 09:03:14] 2024-05-16 16:02:53,515 | INFO     | -- intersect: -5746837994.40236
[2024-05-16 09:03:14] 2024-05-16 16:02:53,515 | INFO     | intersect: -5746837994.40236
[2024-05-16 09:03:14] 2024-05-16 16:02:53,515 | INFO     | chi2: 0.0004932577598421834
[2024-05-16 09:03:14] 2024-05-16 16:02:53,515 | INFO     | -- intersect: -5746837994.40236
[2024-05-16 09:03:14] 2024-05-16 16:02:53,515 | INFO     | current memory leak: 3.35 B/s (using 144 data points, chi2=0.00)
[2024-05-16 09:03:14] 2024-05-16 16:02:53,516 | INFO     | ..............................
[2024-05-16 09:03:14] 2024-05-16 16:02:53,516 | INFO     | . Timing measurements:
[2024-05-16 09:03:14] 2024-05-16 16:02:53,516 | INFO     | . get job = 0 s
[2024-05-16 09:03:14] 2024-05-16 16:02:53,516 | INFO     | . initial setup = 2 s
[2024-05-16 09:03:14] 2024-05-16 16:02:53,516 | INFO     | . payload setup = 6 s
[2024-05-16 09:03:14] 2024-05-16 16:02:53,516 | INFO     | . stage-in = 0 s
[2024-05-16 09:03:14] 2024-05-16 16:02:53,516 | INFO     | . payload execution = 12204 s
[2024-05-16 09:03:14] 2024-05-16 16:02:53,516 | INFO     | . stage-out = 2 s
[2024-05-16 09:03:14] 2024-05-16 16:02:53,516 | INFO     | . log creation = 0 s
[2024-05-16 09:03:14] 2024-05-16 16:02:53,516 | INFO     | ..............................
[2024-05-16 09:03:14] 2024-05-16 16:02:53,862 | INFO     | 
[2024-05-16 09:03:14] 2024-05-16 16:02:53,862 | INFO     | job summary report
[2024-05-16 09:03:14] 2024-05-16 16:02:53,862 | INFO     | --------------------------------------------------
[2024-05-16 09:03:14] 2024-05-16 16:02:53,863 | INFO     | PanDA job id: 6206814486
[2024-05-16 09:03:14] 2024-05-16 16:02:53,863 | INFO     | task id: 38921013
[2024-05-16 09:03:14] 2024-05-16 16:02:53,863 | INFO     | errors: (none)
[2024-05-16 09:03:14] 2024-05-16 16:02:53,863 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 09:03:14] 2024-05-16 16:02:53,863 | INFO     | pilot state: finished 
[2024-05-16 09:03:14] 2024-05-16 16:02:53,863 | INFO     | transexitcode: 0
[2024-05-16 09:03:14] 2024-05-16 16:02:53,863 | INFO     | exeerrorcode: 0
[2024-05-16 09:03:14] 2024-05-16 16:02:53,863 | INFO     | exeerrordiag: 
[2024-05-16 09:03:14] 2024-05-16 16:02:53,863 | INFO     | exitcode: 0
[2024-05-16 09:03:14] 2024-05-16 16:02:53,863 | INFO     | exitmsg: OK
[2024-05-16 09:03:14] 2024-05-16 16:02:53,864 | INFO     | cpuconsumptiontime: 101983 s
[2024-05-16 09:03:14] 2024-05-16 16:02:53,864 | INFO     | nevents: 400
[2024-05-16 09:03:14] 2024-05-16 16:02:53,864 | INFO     | neventsw: 0
[2024-05-16 09:03:14] 2024-05-16 16:02:53,864 | INFO     | pid: 42032
[2024-05-16 09:03:14] 2024-05-16 16:02:53,864 | INFO     | pgrp: 42032
[2024-05-16 09:03:14] 2024-05-16 16:02:53,864 | INFO     | corecount: 12
[2024-05-16 09:03:14] 2024-05-16 16:02:53,864 | INFO     | event service: False
[2024-05-16 09:03:14] 2024-05-16 16:02:53,864 | INFO     | sizes: {0: 2392200, 6: 2392406, 11: 2392434, 12215: 2421945, 12218: 2430899, 12222: 2430955, 12229: 2431253}
[2024-05-16 09:03:14] 2024-05-16 16:02:53,864 | INFO     | --------------------------------------------------
[2024-05-16 09:03:14] 2024-05-16 16:02:53,864 | INFO     | 
[2024-05-16 09:03:14] 2024-05-16 16:02:53,865 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-16 09:03:14] 2024-05-16 16:02:53,901 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,902 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,902 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,902 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,903 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,903 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,903 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 09:03:14] 2024-05-16 16:02:53,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,903 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 09:03:14] 2024-05-16 16:02:53,904 | INFO     | job 6206814486 has completed (purged errors)
[2024-05-16 09:03:14] 2024-05-16 16:02:53,904 | INFO     | overall cleanup function is called
[2024-05-16 09:03:14] 2024-05-16 16:02:54,911 | INFO     | --- collectZombieJob: --- 10, [42032]
[2024-05-16 09:03:14] 2024-05-16 16:02:54,911 | INFO     | zombie collector waiting for pid 42032
[2024-05-16 09:03:14] 2024-05-16 16:02:54,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 09:03:14] 2024-05-16 16:02:55,913 | INFO     | collected zombie processes
[2024-05-16 09:03:14] 2024-05-16 16:02:55,913 | INFO     | will now attempt to kill all subprocesses of pid=42032
[2024-05-16 09:03:14] 2024-05-16 16:02:56,040 | INFO     | process IDs to be killed: [42032] (in reverse order)
[2024-05-16 09:03:14] 2024-05-16 16:02:56,122 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 09:03:14] 2024-05-16 16:02:56,123 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 09:03:14] 2024-05-16 16:02:56,128 | INFO     | did not find any defunct processes belonging to 42032
[2024-05-16 09:03:14] 2024-05-16 16:02:56,132 | INFO     | did not find any defunct processes belonging to 42032
[2024-05-16 09:03:14] 2024-05-16 16:02:56,132 | INFO     | ready for new job
[2024-05-16 09:03:14] 2024-05-16 16:02:56,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 09:03:14] 2024-05-16 16:02:56,133 | INFO     | *************************************
[2024-05-16 09:03:14] 2024-05-16 16:02:56,134 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 09:03:14] 2024-05-16 16:02:56,134 | INFO     | *************************************
[2024-05-16 09:03:14] 2024-05-16 16:02:56,134 | INFO     | 
[2024-05-16 09:03:14] 2024-05-16 16:02:56,136 | INFO     | architecture information:
[2024-05-16 09:03:14] 2024-05-16 16:02:56,136 | INFO     | executing command: cat /etc/os-release
[2024-05-16 09:03:14] 2024-05-16 16:02:56,159 | INFO     | cat /etc/os-release:
[2024-05-16 09:03:14] NAME="CentOS Linux"
[2024-05-16 09:03:14] VERSION="7 (Core)"
[2024-05-16 09:03:14] ID="centos"
[2024-05-16 09:03:14] ID_LIKE="rhel fedora"
[2024-05-16 09:03:14] VERSION_ID="7"
[2024-05-16 09:03:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 09:03:14] ANSI_COLOR="0;31"
[2024-05-16 09:03:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 09:03:14] HOME_URL="https://www.centos.org/"
[2024-05-16 09:03:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 09:03:14] 
[2024-05-16 09:03:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 09:03:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 09:03:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 09:03:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 09:03:14] 
[2024-05-16 09:03:14] 2024-05-16 16:02:56,159 | INFO     | *************************************
[2024-05-16 09:03:14] 2024-05-16 16:02:56,661 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-16 09:03:14] 2024-05-16 16:02:56,686 | INFO     | sufficient remaining disk space (1995433836544 B)
[2024-05-16 09:03:14] 2024-05-16 16:02:56,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 09:03:14] 2024-05-16 16:02:56,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 09:03:14] 2024-05-16 16:02:56,687 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 09:03:14] 2024-05-16 16:02:56,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 09:03:14] 2024-05-16 16:02:56,688 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 09:03:14] 2024-05-16 16:02:56,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 09:03:14] 2024-05-16 16:02:56,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 09:03:14] 2024-05-16 16:02:56,722 | INFO     | all data control threads have been joined
[2024-05-16 09:03:14] 2024-05-16 16:02:57,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 09:03:14] 2024-05-16 16:02:57,295 | INFO     | aborting loop
[2024-05-16 09:03:14] 2024-05-16 16:02:57,427 | INFO     | all payload control threads have been joined
[2024-05-16 09:03:14] 2024-05-16 16:02:57,692 | INFO     | [job] retrieve thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:02:57,729 | INFO     | [data] control thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:02:58,032 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:02:58,045 | INFO     | [payload] validate_post thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:02:58,083 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:02:58,117 | INFO     | all job control threads have been joined
[2024-05-16 09:03:14] 2024-05-16 16:02:58,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 09:03:14] 2024-05-16 16:02:58,190 | INFO     | [job] validate thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:02:58,279 | INFO     | [payload] failed_post thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:02:58,300 | INFO     | [job] job monitor thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:02:58,432 | INFO     | [payload] control thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:02:58,490 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:02:58,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 09:03:14] 2024-05-16 16:02:58,779 | INFO     | [data] copytool_in thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:02:59,122 | INFO     | [job] control thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:02:59,580 | INFO     | [job] queue monitor thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:03:00,177 | INFO     | [data] copytool_out thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:03:00,693 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:03:06,812 | INFO     | job.realtimelogging is not enabled
[2024-05-16 09:03:14] 2024-05-16 16:03:07,815 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 09:03:14] 2024-05-16 16:03:08,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686338537280)>', '<ExcThread(monitor, started 140685529306880)>']
[2024-05-16 09:03:14] 2024-05-16 16:03:09,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 09:03:14] 2024-05-16 16:03:09,749 | INFO     | [monitor] control thread has ended
[2024-05-16 09:03:14] 2024-05-16 16:03:13,781 | INFO     | all workflow threads have been joined
[2024-05-16 09:03:14] 2024-05-16 16:03:13,781 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 09:03:14] 2024-05-16 16:03:13,781 | INFO     | traces error code: 0
[2024-05-16 09:03:14] 2024-05-16 16:03:13,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 09:03:14] 2024-05-16 16:03:13,868 [wrapper] ==== pilot stdout END ====
[2024-05-16 09:03:14] 2024-05-16 16:03:13,876 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 09:03:14] 2024-05-16 16:03:13,882 [wrapper] pilotpid: 25453
[2024-05-16 09:03:14] 2024-05-16 16:03:13,889 [wrapper] Pilot exit status: 0
[2024-05-16 09:03:14] 2024-05-16 16:03:13,915 [wrapper] pandaids: 6206814486
[2024-05-16 09:03:14] 2024-05-16 16:03:14,048 [wrapper] cleanup: SIGTERM to supervisor_pilot 196425 25454
[2024-05-16 09:03:14] 2024-05-16 16:03:14,057 [wrapper] Test setup, not cleaning
[2024-05-16 09:03:14] 2024-05-16 16:03:14,064 [wrapper] ==== wrapper stdout END ====
[2024-05-16 09:03:14] 2024-05-16 16:03:14,071 [wrapper] ==== wrapper stderr END ====
[2024-05-16 09:03:14] 2024-05-16 16:03:14,082 [wrapper] apfmon messages muted
[2024-05-16 09:03:14]  *** Error codes and diagnostics ***
[2024-05-16 09:03:14]     "exeErrorCode": 0,
[2024-05-16 09:03:14]     "exeErrorDiag": "",
[2024-05-16 09:03:14]     "pilotErrorCode": 0,
[2024-05-16 09:03:14]     "pilotErrorDiag": "",
[2024-05-16 09:03:14]  *** Listing of results directory ***
[2024-05-16 09:03:14] total 870484
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc    467845 May 15 07:23 pilot3.tar.gz
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc      5633 May 15 07:43 queuedata.json
[2024-05-16 09:03:14] -rwx------ 1 boinc boinc     32251 May 15 07:44 runpilot2-wrapper.sh
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc       100 May 16 05:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 09:03:14] -rwxr-xr-x 1 boinc boinc      7986 May 16 05:38 run_atlas
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc       105 May 16 05:38 job.xml
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc      6627 May 16 05:38 init_data.xml
[2024-05-16 09:03:14] -rw-r--r-- 2 boinc boinc 541000992 May 16 05:38 EVNT.38776210._000002.pool.root.1
[2024-05-16 09:03:14] -rw-r--r-- 2 boinc boinc     17537 May 16 05:38 start_atlas.sh
[2024-05-16 09:03:14] drwxrwx--x 2 boinc boinc      4096 May 16 05:38 shared
[2024-05-16 09:03:14] -rw-r--r-- 2 boinc boinc    479998 May 16 05:38 input.tar.gz
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc         0 May 16 05:38 boinc_lockfile
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc      2640 May 16 05:38 pandaJob.out
[2024-05-16 09:03:14] -rw------- 1 boinc boinc       424 May 16 05:38 setup.sh.local
[2024-05-16 09:03:14] -rw------- 1 boinc boinc   1010335 May 16 05:38 agis_schedconf.cvmfs.json
[2024-05-16 09:03:14] -rw------- 1 boinc boinc   1324701 May 16 05:38 cric_ddmendpoints.json
[2024-05-16 09:03:14] drwx------ 4 boinc boinc      4096 May 16 05:38 pilot3
[2024-05-16 09:03:14] -rw------- 1 boinc boinc 343609086 May 16 09:01 HITS.38921013._000036.pool.root.1
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc       533 May 16 09:01 boinc_task_state.xml
[2024-05-16 09:03:14] -rw------- 1 boinc boinc      1065 May 16 09:02 memory_monitor_summary.json
[2024-05-16 09:03:14] -rw------- 1 boinc boinc         0 May 16 09:02 agis_ddmendpoints.agis.ALL.json
[2024-05-16 09:03:14] -rw------- 1 boinc boinc    443616 May 16 09:02 log.38921013._000036.job.log.tgz.1
[2024-05-16 09:03:14] -rw------- 1 boinc boinc        95 May 16 09:02 pilot_heartbeat.json
[2024-05-16 09:03:14] -rw------- 1 boinc boinc      7782 May 16 09:02 heartbeat.json
[2024-05-16 09:03:14] -rw------- 1 boinc boinc      4405 May 16 09:03 pilotlog.txt
[2024-05-16 09:03:14] -rw------- 1 boinc boinc   1178742 May 16 09:03 log.38921013._000036.job.log.1
[2024-05-16 09:03:14] -rw------- 1 boinc boinc       357 May 16 09:03 output.list
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc       620 May 16 09:03 runtime_log
[2024-05-16 09:03:14] -rw------- 1 boinc boinc   1638400 May 16 09:03 result.tar.gz
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc     11287 May 16 09:03 runtime_log.err
[2024-05-16 09:03:14] -rw------- 1 boinc boinc       661 May 16 09:03 JUVMDmt2UR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmeSOKDmRWyqlm.diag
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc      8192 May 16 09:03 boinc_mmap_file
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc        29 May 16 09:03 wrapper_checkpoint.txt
[2024-05-16 09:03:14] -rw-r--r-- 1 boinc boinc     21985 May 16 09:03 stderr.txt
[2024-05-16 09:03:14] HITS file was successfully produced:
[2024-05-16 09:03:14] -rw------- 1 boinc boinc 343609086 May 16 09:01 shared/HITS.pool.root.1
[2024-05-16 09:03:14]  *** Contents of shared directory: ***
[2024-05-16 09:03:14] total 865980
[2024-05-16 09:03:14] -rw-r--r-- 2 boinc boinc 541000992 May 16 05:38 ATLAS.root_0
[2024-05-16 09:03:14] -rw-r--r-- 2 boinc boinc     17537 May 16 05:38 start_atlas.sh
[2024-05-16 09:03:14] -rw-r--r-- 2 boinc boinc    479998 May 16 05:38 input.tar.gz
[2024-05-16 09:03:14] -rw------- 1 boinc boinc 343609086 May 16 09:01 HITS.pool.root.1
[2024-05-16 09:03:14] -rw------- 1 boinc boinc   1638400 May 16 09:03 result.tar.gz
09:03:16 (16903): run_atlas exited; CPU time 101578.172759
09:03:16 (16903): called boinc_finish(0)

</stderr_txt>
]]>

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