Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:01:12 (211860): wrapper (7.7.26015): starting
14:01:12 (211860): wrapper: running run_atlas (--nthreads 8)
[2024-05-15 14:01:12] Arguments: --nthreads 8
[2024-05-15 14:01:12] Threads: 8
[2024-05-15 14:01:12] Checking for CVMFS
[2024-05-15 14:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 14:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 14:01:13] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 14:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 14:01:13] 2.11.2.0 191761 28 98120 132768 3 676 17375462 18432000 11689 130560 0 523222 97.128 2492982 26996 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-05-15 14:01:13] CVMFS is ok
[2024-05-15 14:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 14:01:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 14:01:13] Further information can be found at the LHC@home message board.
[2024-05-15 14:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 14:01:13] Checking for apptainer binary...
[2024-05-15 14:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 14:01:13] Running /usr/bin/apptainer --version
[2024-05-15 14:01:13] apptainer version 1.3.0-1.el7
[2024-05-15 14:01:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 14:01:14] c-211-35-1.aglt2.org
[2024-05-15 14:01:14] apptainer works
[2024-05-15 14:01:14] Set ATHENA_PROC_NUMBER=8
[2024-05-15 14:01:14] Set ATHENA_CORE_NUMBER=8
[2024-05-15 14:01:14] Starting ATLAS job with PandaID=6206778291
[2024-05-15 14:01:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 20:23:07]  *** The last 200 lines of the pilot log: ***
[2024-05-15 20:23:07] 2024-05-16 00:22:43,240 | INFO     | executing command: lscpu
[2024-05-15 20:23:07] 2024-05-16 00:22:43,378 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-15 20:23:07] 2024-05-16 00:22:43,378 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-15 20:23:07] 2024-05-16 00:22:43,535 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-15 20:23:07] 2024-05-16 00:22:45,637 | INFO     | monitor loop #1503: job 0:6206778291 is in state 'finished'
[2024-05-15 20:23:07] 2024-05-16 00:22:45,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 20:23:07] 2024-05-16 00:22:48,141 | INFO     | monitor loop #1504: job 0:6206778291 is in state 'finished'
[2024-05-15 20:23:07] 2024-05-16 00:22:48,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 20:23:07] 2024-05-16 00:22:50,644 | INFO     | monitor loop #1505: job 0:6206778291 is in state 'finished'
[2024-05-15 20:23:07] 2024-05-16 00:22:50,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 20:23:07] 2024-05-16 00:22:53,147 | INFO     | monitor loop #1506: job 0:6206778291 is in state 'finished'
[2024-05-15 20:23:07] 2024-05-16 00:22:53,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 20:23:07] 2024-05-16 00:22:54,363 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-15 20:23:07] 2024-05-16 00:22:54,364 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6206778291/memory_monitor_summary.json (trf name=prmon)
[2024-05-15 20:23:07] 2024-05-16 00:22:54,365 | INFO     | extracted standard info from prmon json
[2024-05-15 20:23:07] 2024-05-16 00:22:54,365 | INFO     | extracted standard memory fields from prmon json
[2024-05-15 20:23:07] 2024-05-16 00:22:54,365 | WARNING  | GPU info not found in prmon json
[2024-05-15 20:23:07] 2024-05-16 00:22:54,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-15 20:23:07] 2024-05-16 00:22:54,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-15 20:23:07] 2024-05-16 00:22:54,373 | INFO     | fitting pss+swap vs Time
[2024-05-15 20:23:07] 2024-05-16 00:22:54,374 | INFO     | model: linear, x: [1715796127.0, 1715796188.0, 1715796249.0, 1715796310.0, 1715796371.0, 1715796432.0, 1715796493.0, 1715796554.0, 1715796615.0, 1715796676.0, 1715
[2024-05-15 20:23:07] 2024-05-16 00:22:54,374 | INFO     | sum of square deviations: 16352122196.469261
[2024-05-15 20:23:07] 2024-05-16 00:22:54,378 | INFO     | sum of deviations: 679851938456.5679
[2024-05-15 20:23:07] 2024-05-16 00:22:54,378 | INFO     | mean x: 1715807534.2853334
[2024-05-15 20:23:07] 2024-05-16 00:22:54,378 | INFO     | mean y: 2345783.976
[2024-05-15 20:23:07] 2024-05-16 00:22:54,378 | INFO     | -- intersect: -71333659670.6638
[2024-05-15 20:23:07] 2024-05-16 00:22:54,378 | INFO     | intersect: -71333659670.6638
[2024-05-15 20:23:07] 2024-05-16 00:22:54,379 | INFO     | chi2: 17.356122581797063
[2024-05-15 20:23:07] 2024-05-16 00:22:54,379 | INFO     | model: linear, x: [1715796127.0, 1715796188.0, 1715796249.0, 1715796310.0, 1715796371.0, 1715796432.0, 1715796493.0, 1715796554.0, 1715796615.0, 1715796676.0, 1715
[2024-05-15 20:23:07] 2024-05-16 00:22:54,380 | INFO     | sum of square deviations: 15706756683.556831
[2024-05-15 20:23:07] 2024-05-16 00:22:54,383 | INFO     | sum of deviations: 694541589797.352
[2024-05-15 20:23:07] 2024-05-16 00:22:54,384 | INFO     | mean x: 1715807381.789189
[2024-05-15 20:23:07] 2024-05-16 00:22:54,384 | INFO     | mean y: 2349190.3378378376
[2024-05-15 20:23:07] 2024-05-16 00:22:54,384 | INFO     | -- intersect: -75869430753.98816
[2024-05-15 20:23:07] 2024-05-16 00:22:54,384 | INFO     | intersect: -75869430753.98816
[2024-05-15 20:23:07] 2024-05-16 00:22:54,385 | INFO     | chi2: 16.563665431546585
[2024-05-15 20:23:07] 2024-05-16 00:22:54,385 | INFO     | current chi2=16.563665431546585 (change=4.565865137882808 %)
[2024-05-15 20:23:07] 2024-05-16 00:22:54,385 | INFO     | right removable region: 369
[2024-05-15 20:23:07] 2024-05-16 00:22:54,385 | INFO     | model: linear, x: [1715796432.0, 1715796493.0, 1715796554.0, 1715796615.0, 1715796676.0, 1715796737.0, 1715796798.0, 1715796859.0, 1715796920.0, 1715796981.0, 1715
[2024-05-15 20:23:07] 2024-05-16 00:22:54,386 | INFO     | sum of square deviations: 15706691413.556824
[2024-05-15 20:23:07] 2024-05-16 00:22:54,389 | INFO     | sum of deviations: 570932648271.9183
[2024-05-15 20:23:07] 2024-05-16 00:22:54,390 | INFO     | mean x: 1715807686.789189
[2024-05-15 20:23:07] 2024-05-16 00:22:54,390 | INFO     | mean y: 2371490.7297297297
[2024-05-15 20:23:07] 2024-05-16 00:22:54,390 | INFO     | -- intersect: -62366627858.06632
[2024-05-15 20:23:07] 2024-05-16 00:22:54,390 | INFO     | intersect: -62366627858.06632
[2024-05-15 20:23:07] 2024-05-16 00:22:54,391 | INFO     | chi2: 13.641813944058638
[2024-05-15 20:23:07] 2024-05-16 00:22:54,391 | INFO     | current chi2=13.641813944058638 (change=21.40056697706178 %)
[2024-05-15 20:23:07] 2024-05-16 00:22:54,391 | INFO     | left removable region: 10
[2024-05-15 20:23:07] 2024-05-16 00:22:54,391 | INFO     | model: linear, x: [1715796737.0, 1715796798.0, 1715796859.0, 1715796920.0, 1715796981.0, 1715797042.0, 1715797103.0, 1715797164.0, 1715797225.0, 1715797286.0, 1715
[2024-05-15 20:23:07] 2024-05-16 00:22:54,392 | INFO     | sum of square deviations: 14347072447.108685
[2024-05-15 20:23:07] 2024-05-16 00:22:54,395 | INFO     | sum of deviations: 498046625398.6573
[2024-05-15 20:23:07] 2024-05-16 00:22:54,396 | INFO     | mean x: 1715807656.2980502
[2024-05-15 20:23:07] 2024-05-16 00:22:54,396 | INFO     | mean y: 2396652.367688022
[2024-05-15 20:23:07] 2024-05-16 00:22:54,396 | INFO     | -- intersect: -59560431666.98314
[2024-05-15 20:23:07] 2024-05-16 00:22:54,396 | INFO     | intersect: -59560431666.98314
[2024-05-15 20:23:07] 2024-05-16 00:22:54,397 | INFO     | chi2: 10.667722968857388
[2024-05-15 20:23:07] 2024-05-16 00:22:54,397 | INFO     | -- intersect: -59560431666.98314
[2024-05-15 20:23:07] 2024-05-16 00:22:54,397 | INFO     | current memory leak: 34.71 B/s (using 359 data points, chi2=10.67)
[2024-05-15 20:23:07] 2024-05-16 00:22:54,398 | INFO     | ..............................
[2024-05-15 20:23:07] 2024-05-16 00:22:54,398 | INFO     | . Timing measurements:
[2024-05-15 20:23:07] 2024-05-16 00:22:54,398 | INFO     | . get job = 0 s
[2024-05-15 20:23:07] 2024-05-16 00:22:54,398 | INFO     | . initial setup = 1 s
[2024-05-15 20:23:07] 2024-05-16 00:22:54,398 | INFO     | . payload setup = 9 s
[2024-05-15 20:23:07] 2024-05-16 00:22:54,398 | INFO     | . stage-in = 0 s
[2024-05-15 20:23:07] 2024-05-16 00:22:54,398 | INFO     | . payload execution = 22834 s
[2024-05-15 20:23:07] 2024-05-16 00:22:54,399 | INFO     | . stage-out = 2 s
[2024-05-15 20:23:07] 2024-05-16 00:22:54,399 | INFO     | . log creation = 0 s
[2024-05-15 20:23:07] 2024-05-16 00:22:54,399 | INFO     | ..............................
[2024-05-15 20:23:07] 2024-05-16 00:22:54,538 | INFO     | 
[2024-05-15 20:23:07] 2024-05-16 00:22:54,538 | INFO     | job summary report
[2024-05-15 20:23:07] 2024-05-16 00:22:54,538 | INFO     | --------------------------------------------------
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | PanDA job id: 6206778291
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | task id: 38776104
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | errors: (none)
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | pilot state: finished 
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | transexitcode: 0
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | exeerrorcode: 0
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | exeerrordiag: 
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | exitcode: 0
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | exitmsg: OK
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | cpuconsumptiontime: 48966 s
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | nevents: 400
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | neventsw: 0
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | pid: 8767
[2024-05-15 20:23:07] 2024-05-16 00:22:54,539 | INFO     | pgrp: 8767
[2024-05-15 20:23:07] 2024-05-16 00:22:54,540 | INFO     | corecount: 8
[2024-05-15 20:23:07] 2024-05-16 00:22:54,540 | INFO     | event service: False
[2024-05-15 20:23:07] 2024-05-16 00:22:54,540 | INFO     | sizes: {0: 2392030, 1: 2392229, 8: 2392435, 12: 2392463, 22847: 2427036, 22850: 2435996, 22853: 2436180, 22865: 2436350}
[2024-05-15 20:23:07] 2024-05-16 00:22:54,540 | INFO     | --------------------------------------------------
[2024-05-15 20:23:07] 2024-05-16 00:22:54,540 | INFO     | 
[2024-05-15 20:23:07] 2024-05-16 00:22:54,540 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2024-05-15 20:23:07] 2024-05-16 00:22:54,605 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,605 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,605 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,607 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 20:23:07] 2024-05-16 00:22:54,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,607 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 20:23:07] 2024-05-16 00:22:54,607 | INFO     | job 6206778291 has completed (purged errors)
[2024-05-15 20:23:07] 2024-05-16 00:22:54,607 | INFO     | overall cleanup function is called
[2024-05-15 20:23:07] 2024-05-16 00:22:55,615 | INFO     | --- collectZombieJob: --- 10, [8767]
[2024-05-15 20:23:07] 2024-05-16 00:22:55,615 | INFO     | zombie collector waiting for pid 8767
[2024-05-15 20:23:07] 2024-05-16 00:22:55,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 20:23:07] 2024-05-16 00:22:56,621 | INFO     | collected zombie processes
[2024-05-15 20:23:07] 2024-05-16 00:22:56,621 | INFO     | will now attempt to kill all subprocesses of pid=8767
[2024-05-15 20:23:07] 2024-05-16 00:22:56,880 | INFO     | process IDs to be killed: [8767] (in reverse order)
[2024-05-15 20:23:07] 2024-05-16 00:22:57,077 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 20:23:07] 2024-05-16 00:22:57,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 20:23:07] 2024-05-16 00:22:57,091 | INFO     | did not find any defunct processes belonging to 8767
[2024-05-15 20:23:07] 2024-05-16 00:22:57,103 | INFO     | did not find any defunct processes belonging to 8767
[2024-05-15 20:23:07] 2024-05-16 00:22:57,104 | INFO     | ready for new job
[2024-05-15 20:23:07] 2024-05-16 00:22:57,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 20:23:07] 2024-05-16 00:22:57,106 | INFO     | *************************************
[2024-05-15 20:23:07] 2024-05-16 00:22:57,107 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 20:23:07] 2024-05-16 00:22:57,107 | INFO     | *************************************
[2024-05-15 20:23:07] 2024-05-16 00:22:57,107 | INFO     | 
[2024-05-15 20:23:07] 2024-05-16 00:22:57,112 | INFO     | architecture information:
[2024-05-15 20:23:07] 2024-05-16 00:22:57,112 | INFO     | executing command: cat /etc/os-release
[2024-05-15 20:23:07] 2024-05-16 00:22:57,148 | INFO     | cat /etc/os-release:
[2024-05-15 20:23:07] NAME="CentOS Linux"
[2024-05-15 20:23:07] VERSION="7 (Core)"
[2024-05-15 20:23:07] ID="centos"
[2024-05-15 20:23:07] ID_LIKE="rhel fedora"
[2024-05-15 20:23:07] VERSION_ID="7"
[2024-05-15 20:23:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 20:23:07] ANSI_COLOR="0;31"
[2024-05-15 20:23:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 20:23:07] HOME_URL="https://www.centos.org/"
[2024-05-15 20:23:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 20:23:07] 
[2024-05-15 20:23:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 20:23:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 20:23:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 20:23:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 20:23:07] 
[2024-05-15 20:23:07] 2024-05-16 00:22:57,149 | INFO     | *************************************
[2024-05-15 20:23:07] 2024-05-16 00:22:57,651 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2024-05-15 20:23:07] 2024-05-16 00:22:57,728 | INFO     | sufficient remaining disk space (100455677952 B)
[2024-05-15 20:23:07] 2024-05-16 00:22:57,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 20:23:07] 2024-05-16 00:22:57,729 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 20:23:07] 2024-05-16 00:22:57,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 20:23:07] 2024-05-16 00:22:58,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 20:23:07] 2024-05-16 00:22:58,120 | INFO     | all payload control threads have been joined
[2024-05-15 20:23:07] 2024-05-16 00:22:58,179 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-15 20:23:07] 2024-05-16 00:22:58,179 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-15 20:23:07] 2024-05-16 00:22:58,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 20:23:07] 2024-05-16 00:22:58,180 | INFO     | will abort loop
[2024-05-15 20:23:07] 2024-05-16 00:22:58,354 | INFO     | all data control threads have been joined
[2024-05-15 20:23:07] 2024-05-16 00:22:58,484 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 20:23:07] 2024-05-16 00:22:58,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 20:23:07] 2024-05-16 00:22:58,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 20:23:07] 2024-05-16 00:22:58,734 | INFO     | [job] retrieve thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:22:58,761 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:22:58,909 | INFO     | [payload] validate_post thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:22:58,962 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:22:58,966 | INFO     | all job control threads have been joined
[2024-05-15 20:23:07] 2024-05-16 00:22:59,077 | INFO     | [payload] failed_post thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:22:59,126 | INFO     | [payload] control thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:22:59,169 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:22:59,185 | INFO     | [job] job monitor thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:22:59,360 | INFO     | [data] control thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:22:59,469 | INFO     | [job] validate thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:22:59,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 20:23:07] 2024-05-16 00:22:59,972 | INFO     | [job] control thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:23:00,050 | INFO     | [data] copytool_in thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:23:00,094 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:23:00,115 | INFO     | [data] copytool_out thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:23:00,555 | INFO     | [job] queue monitor thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:23:01,750 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 20:23:07] 2024-05-16 00:23:01,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253860755264)>', '<ExcThread(monitor, started 140252693919488)>']
[2024-05-15 20:23:07] 2024-05-16 00:23:02,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 20:23:07] 2024-05-16 00:23:02,505 | INFO     | [monitor] control thread has ended
[2024-05-15 20:23:07] 2024-05-16 00:23:06,899 | INFO     | all workflow threads have been joined
[2024-05-15 20:23:07] 2024-05-16 00:23:06,899 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 20:23:07] 2024-05-16 00:23:06,900 | INFO     | traces error code: 0
[2024-05-15 20:23:07] 2024-05-16 00:23:06,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 20:23:07] 2024-05-16 00:23:06,986 [wrapper] ==== pilot stdout END ====
[2024-05-15 20:23:07] 2024-05-16 00:23:06,989 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 20:23:07] 2024-05-16 00:23:06,993 [wrapper] pilotpid: 257568
[2024-05-15 20:23:07] 2024-05-16 00:23:07,006 [wrapper] Pilot exit status: 0
[2024-05-15 20:23:07] 2024-05-16 00:23:07,023 [wrapper] pandaids: 6206778291
[2024-05-15 20:23:07] 2024-05-16 00:23:07,130 [wrapper] cleanup: SIGTERM to supervisor_pilot  74809 257569
[2024-05-15 20:23:07] 2024-05-16 00:23:07,136 [wrapper] Test setup, not cleaning
[2024-05-15 20:23:07] 2024-05-16 00:23:07,138 [wrapper] ==== wrapper stdout END ====
[2024-05-15 20:23:07] 2024-05-16 00:23:07,142 [wrapper] ==== wrapper stderr END ====
[2024-05-15 20:23:07] 2024-05-16 00:23:07,148 [wrapper] apfmon messages muted
[2024-05-15 20:23:07]  *** Error codes and diagnostics ***
[2024-05-15 20:23:07]     "exeErrorCode": 0,
[2024-05-15 20:23:07]     "exeErrorDiag": "",
[2024-05-15 20:23:07]     "pilotErrorCode": 0,
[2024-05-15 20:23:07]     "pilotErrorDiag": "",
[2024-05-15 20:23:07]  *** Listing of results directory ***
[2024-05-15 20:23:07] total 825584
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas      5633 May 15 09:36 queuedata.json
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas    467845 May 15 09:36 pilot3.tar.gz
[2024-05-15 20:23:07] -rwx------ 1 boincer umatlas     32251 May 15 09:36 runpilot2-wrapper.sh
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas       100 May 15 14:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 20:23:07] -rwxr-xr-x 1 boincer umatlas      7986 May 15 14:01 run_atlas
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas       105 May 15 14:01 job.xml
[2024-05-15 20:23:07] -rw-r--r-- 2 boincer umatlas 602116180 May 15 14:01 EVNT.38776100._000233.pool.root.1
[2024-05-15 20:23:07] -rw-r--r-- 2 boincer umatlas     17537 May 15 14:01 start_atlas.sh
[2024-05-15 20:23:07] drwxrwx--x 2 boincer umatlas      4096 May 15 14:01 shared
[2024-05-15 20:23:07] -rw-r--r-- 2 boincer umatlas    480003 May 15 14:01 input.tar.gz
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas         0 May 15 14:01 boinc_lockfile
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas      2640 May 15 14:01 pandaJob.out
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas       467 May 15 14:01 setup.sh.local
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas   1011265 May 15 14:01 agis_schedconf.cvmfs.json
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas   1324701 May 15 14:01 cric_ddmendpoints.json
[2024-05-15 20:23:07] drwx------ 4 boincer umatlas      4096 May 15 14:01 pilot3
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas      6384 May 15 20:20 init_data.xml
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas 234566486 May 15 20:21 HITS.38776104._005916.pool.root.1
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas       531 May 15 20:21 boinc_task_state.xml
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas      1069 May 15 20:22 memory_monitor_summary.json
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas         0 May 15 20:22 agis_ddmendpoints.agis.ALL.json
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas    488497 May 15 20:22 log.38776104._005916.job.log.tgz.1
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas        95 May 15 20:22 pilot_heartbeat.json
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas      7785 May 15 20:22 heartbeat.json
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas      8192 May 15 20:23 boinc_mmap_file
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas        28 May 15 20:23 wrapper_checkpoint.txt
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas      4398 May 15 20:23 pilotlog.txt
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas   2101844 May 15 20:23 log.38776104._005916.job.log.1
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas       357 May 15 20:23 output.list
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas       620 May 15 20:23 runtime_log
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas   2611200 May 15 20:23 result.tar.gz
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas     11415 May 15 20:23 runtime_log.err
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas       651 May 15 20:23 pAFMDm7yTR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm2TJKDmmYaO2m.diag
[2024-05-15 20:23:07] -rw-r--r-- 1 boincer umatlas     21857 May 15 20:23 stderr.txt
[2024-05-15 20:23:07] HITS file was successfully produced:
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas 234566486 May 15 20:21 shared/HITS.pool.root.1
[2024-05-15 20:23:07]  *** Contents of shared directory: ***
[2024-05-15 20:23:07] total 820132
[2024-05-15 20:23:07] -rw-r--r-- 2 boincer umatlas 602116180 May 15 14:01 ATLAS.root_0
[2024-05-15 20:23:07] -rw-r--r-- 2 boincer umatlas     17537 May 15 14:01 start_atlas.sh
[2024-05-15 20:23:07] -rw-r--r-- 2 boincer umatlas    480003 May 15 14:01 input.tar.gz
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas 234566486 May 15 20:21 HITS.pool.root.1
[2024-05-15 20:23:07] -rw------- 1 boincer umatlas   2611200 May 15 20:23 result.tar.gz
20:23:09 (211860): run_atlas exited; CPU time 48542.943292
20:23:09 (211860): called boinc_finish(0)

</stderr_txt>
]]>

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