Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:31:23 (9501): wrapper (7.7.26015): starting
13:31:23 (9501): wrapper: running run_atlas (--nthreads 8)
[2024-05-15 13:31:23] Arguments: --nthreads 8
[2024-05-15 13:31:23] Threads: 8
[2024-05-15 13:31:23] Checking for CVMFS
[2024-05-15 13:31:24] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 13:31:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 13:31:25] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 13:31:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 13:31:26] 2.11.2.0 18811 2610 128132 132768 3 344 12840503 18432000 32470 130560 0 20862007 98.787 45884949 53511 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-05-15 13:31:26] CVMFS is ok
[2024-05-15 13:31:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 13:31:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 13:31:26] Further information can be found at the LHC@home message board.
[2024-05-15 13:31:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 13:31:26] Checking for apptainer binary...
[2024-05-15 13:31:26] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 13:31:26] Running /usr/bin/apptainer --version
[2024-05-15 13:31:26] apptainer version 1.3.0-1.el7
[2024-05-15 13:31:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 13:31:40] c-212-7.aglt2.org
[2024-05-15 13:31:40] apptainer works
[2024-05-15 13:31:40] Set ATHENA_PROC_NUMBER=8
[2024-05-15 13:31:40] Set ATHENA_CORE_NUMBER=8
[2024-05-15 13:31:40] Starting ATLAS job with PandaID=6206778234
[2024-05-15 13:31:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 16:39:47]  *** The last 200 lines of the pilot log: ***
[2024-05-15 16:39:47] 2024-05-15 20:39:11,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 16:39:47] 2024-05-15 20:39:14,314 | INFO     | monitor loop #829: job 0:6206778234 is in state 'finished'
[2024-05-15 16:39:47] 2024-05-15 20:39:14,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 16:39:47] 2024-05-15 20:39:16,839 | INFO     | monitor loop #830: job 0:6206778234 is in state 'finished'
[2024-05-15 16:39:47] 2024-05-15 20:39:16,839 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 16:39:47] 2024-05-15 20:39:19,346 | INFO     | monitor loop #831: job 0:6206778234 is in state 'finished'
[2024-05-15 16:39:47] 2024-05-15 20:39:19,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 16:39:47] 2024-05-15 20:39:21,864 | INFO     | monitor loop #832: job 0:6206778234 is in state 'finished'
[2024-05-15 16:39:47] 2024-05-15 20:39:21,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 16:39:47] 2024-05-15 20:39:24,369 | INFO     | monitor loop #833: job 0:6206778234 is in state 'finished'
[2024-05-15 16:39:47] 2024-05-15 20:39:24,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 16:39:47] 2024-05-15 20:39:26,874 | INFO     | monitor loop #834: job 0:6206778234 is in state 'finished'
[2024-05-15 16:39:47] 2024-05-15 20:39:26,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 16:39:47] 2024-05-15 20:39:27,897 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-15 16:39:47] 2024-05-15 20:39:27,898 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6206778234/memory_monitor_summary.json (trf name=prmon)
[2024-05-15 16:39:47] 2024-05-15 20:39:27,898 | INFO     | extracted standard info from prmon json
[2024-05-15 16:39:47] 2024-05-15 20:39:27,899 | INFO     | extracted standard memory fields from prmon json
[2024-05-15 16:39:47] 2024-05-15 20:39:27,899 | WARNING  | GPU info not found in prmon json
[2024-05-15 16:39:47] 2024-05-15 20:39:27,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-15 16:39:47] 2024-05-15 20:39:27,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-15 16:39:47] 2024-05-15 20:39:27,906 | INFO     | fitting pss+swap vs Time
[2024-05-15 16:39:47] 2024-05-15 20:39:27,906 | INFO     | model: linear, x: [1715794618.0, 1715794679.0, 1715794740.0, 1715794801.0, 1715794862.0, 1715794923.0, 1715794984.0, 1715795045.0, 1715795106.0, 1715795167.0, 1715
[2024-05-15 16:39:47] 2024-05-15 20:39:27,907 | INFO     | sum of square deviations: 1778393881.977653
[2024-05-15 16:39:47] 2024-05-15 20:39:27,907 | INFO     | sum of deviations: 283519973918.9386
[2024-05-15 16:39:47] 2024-05-15 20:39:27,907 | INFO     | mean x: 1715800047.0111732
[2024-05-15 16:39:47] 2024-05-15 20:39:27,908 | INFO     | mean y: 2139773.530726257
[2024-05-15 16:39:47] 2024-05-15 20:39:27,908 | INFO     | -- intersect: -273538828573.56702
[2024-05-15 16:39:47] 2024-05-15 20:39:27,908 | INFO     | intersect: -273538828573.56702
[2024-05-15 16:39:47] 2024-05-15 20:39:27,908 | INFO     | chi2: 13.940584869324464
[2024-05-15 16:39:47] 2024-05-15 20:39:27,908 | INFO     | model: linear, x: [1715794618.0, 1715794679.0, 1715794740.0, 1715794801.0, 1715794862.0, 1715794923.0, 1715794984.0, 1715795045.0, 1715795106.0, 1715795167.0, 1715
[2024-05-15 16:39:47] 2024-05-15 20:39:27,908 | INFO     | sum of square deviations: 1633489449.4770074
[2024-05-15 16:39:47] 2024-05-15 20:39:27,913 | INFO     | sum of deviations: 285047152919.5688
[2024-05-15 16:39:47] 2024-05-15 20:39:27,913 | INFO     | mean x: 1715799894.5114942
[2024-05-15 16:39:47] 2024-05-15 20:39:27,913 | INFO     | mean y: 2141090.4655172415
[2024-05-15 16:39:47] 2024-05-15 20:39:27,913 | INFO     | -- intersect: -299408347949.9059
[2024-05-15 16:39:47] 2024-05-15 20:39:27,913 | INFO     | intersect: -299408347949.9059
[2024-05-15 16:39:47] 2024-05-15 20:39:27,914 | INFO     | chi2: 12.660106472343955
[2024-05-15 16:39:47] 2024-05-15 20:39:27,914 | INFO     | current chi2=12.660106472343955 (change=9.185255919915782 %)
[2024-05-15 16:39:47] 2024-05-15 20:39:27,914 | INFO     | right removable region: 173
[2024-05-15 16:39:47] 2024-05-15 20:39:27,914 | INFO     | model: linear, x: [1715794923.0, 1715794984.0, 1715795045.0, 1715795106.0, 1715795167.0, 1715795228.0, 1715795289.0, 1715795350.0, 1715795411.0, 1715795472.0, 1715
[2024-05-15 16:39:47] 2024-05-15 20:39:27,914 | INFO     | sum of square deviations: 1633488229.4770074
[2024-05-15 16:39:47] 2024-05-15 20:39:27,915 | INFO     | sum of deviations: 232649740514.83908
[2024-05-15 16:39:47] 2024-05-15 20:39:27,915 | INFO     | mean x: 1715800199.5114942
[2024-05-15 16:39:47] 2024-05-15 20:39:27,915 | INFO     | mean y: 2193256.0804597703
[2024-05-15 16:39:47] 2024-05-15 20:39:27,915 | INFO     | -- intersect: -244370838632.53223
[2024-05-15 16:39:47] 2024-05-15 20:39:27,915 | INFO     | intersect: -244370838632.53223
[2024-05-15 16:39:47] 2024-05-15 20:39:27,915 | INFO     | chi2: 10.524776907603023
[2024-05-15 16:39:47] 2024-05-15 20:39:27,916 | INFO     | current chi2=10.524776907603023 (change=24.50261587831763 %)
[2024-05-15 16:39:47] 2024-05-15 20:39:27,916 | INFO     | left removable region: 10
[2024-05-15 16:39:47] 2024-05-15 20:39:27,916 | INFO     | model: linear, x: [1715795228.0, 1715795289.0, 1715795350.0, 1715795411.0, 1715795472.0, 1715795533.0, 1715795594.0, 1715795655.0, 1715795716.0, 1715795777.0, 1715
[2024-05-15 16:39:47] 2024-05-15 20:39:27,916 | INFO     | sum of square deviations: 1342857785.97546
[2024-05-15 16:39:47] 2024-05-15 20:39:27,917 | INFO     | sum of deviations: 199635303456.54605
[2024-05-15 16:39:47] 2024-05-15 20:39:27,917 | INFO     | mean x: 1715800169.01227
[2024-05-15 16:39:47] 2024-05-15 20:39:27,917 | INFO     | mean y: 2234969.226993865
[2024-05-15 16:39:47] 2024-05-15 20:39:27,917 | INFO     | -- intersect: -255076367537.24655
[2024-05-15 16:39:47] 2024-05-15 20:39:27,921 | INFO     | intersect: -255076367537.24655
[2024-05-15 16:39:47] 2024-05-15 20:39:27,921 | INFO     | chi2: 8.400606425603778
[2024-05-15 16:39:47] 2024-05-15 20:39:27,921 | INFO     | -- intersect: -255076367537.24655
[2024-05-15 16:39:47] 2024-05-15 20:39:27,921 | INFO     | current memory leak: 148.66 B/s (using 163 data points, chi2=8.40)
[2024-05-15 16:39:47] 2024-05-15 20:39:27,922 | INFO     | ..............................
[2024-05-15 16:39:47] 2024-05-15 20:39:27,922 | INFO     | . Timing measurements:
[2024-05-15 16:39:47] 2024-05-15 20:39:27,922 | INFO     | . get job = 0 s
[2024-05-15 16:39:47] 2024-05-15 20:39:27,922 | INFO     | . initial setup = 2 s
[2024-05-15 16:39:47] 2024-05-15 20:39:27,922 | INFO     | . payload setup = 55 s
[2024-05-15 16:39:47] 2024-05-15 20:39:27,922 | INFO     | . stage-in = 0 s
[2024-05-15 16:39:47] 2024-05-15 20:39:27,922 | INFO     | . payload execution = 10951 s
[2024-05-15 16:39:47] 2024-05-15 20:39:27,922 | INFO     | . stage-out = 3 s
[2024-05-15 16:39:47] 2024-05-15 20:39:27,922 | INFO     | . log creation = 1 s
[2024-05-15 16:39:47] 2024-05-15 20:39:27,922 | INFO     | ..............................
[2024-05-15 16:39:47] 2024-05-15 20:39:28,656 | INFO     | 
[2024-05-15 16:39:47] 2024-05-15 20:39:28,656 | INFO     | job summary report
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | --------------------------------------------------
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | PanDA job id: 6206778234
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | task id: 38776104
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | errors: (none)
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | pilot state: finished 
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | transexitcode: 0
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | exeerrorcode: 0
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | exeerrordiag: 
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | exitcode: 0
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | exitmsg: OK
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | cpuconsumptiontime: 36947 s
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | nevents: 400
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | neventsw: 0
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | pid: 34835
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | pgrp: 34835
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | corecount: 8
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | event service: False
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | sizes: {0: 2390643, 1: 2392008, 2: 2392207, 13: 2392207, 24: 2392263, 34: 2392291, 45: 2392681, 56: 2392681, 11011: 2421420, 11016: 2430436, 11064: 2430550}
[2024-05-15 16:39:47] 2024-05-15 20:39:28,657 | INFO     | --------------------------------------------------
[2024-05-15 16:39:47] 2024-05-15 20:39:28,658 | INFO     | 
[2024-05-15 16:39:47] 2024-05-15 20:39:28,658 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-05-15 16:39:47] 2024-05-15 20:39:29,001 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,002 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,002 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,002 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,002 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,002 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,002 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,002 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,002 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,002 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,003 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,003 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,003 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 16:39:47] 2024-05-15 20:39:29,003 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,003 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 16:39:47] 2024-05-15 20:39:29,003 | INFO     | job 6206778234 has completed (purged errors)
[2024-05-15 16:39:47] 2024-05-15 20:39:29,003 | INFO     | overall cleanup function is called
[2024-05-15 16:39:47] 2024-05-15 20:39:30,024 | INFO     | --- collectZombieJob: --- 10, [34835]
[2024-05-15 16:39:47] 2024-05-15 20:39:30,024 | INFO     | zombie collector waiting for pid 34835
[2024-05-15 16:39:47] 2024-05-15 20:39:30,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 16:39:47] 2024-05-15 20:39:31,030 | INFO     | collected zombie processes
[2024-05-15 16:39:47] 2024-05-15 20:39:31,030 | INFO     | will now attempt to kill all subprocesses of pid=34835
[2024-05-15 16:39:47] 2024-05-15 20:39:31,506 | INFO     | process IDs to be killed: [34835] (in reverse order)
[2024-05-15 16:39:47] 2024-05-15 20:39:32,509 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 16:39:47] 2024-05-15 20:39:32,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 16:39:47] 2024-05-15 20:39:32,521 | INFO     | did not find any defunct processes belonging to 34835
[2024-05-15 16:39:47] 2024-05-15 20:39:32,532 | INFO     | did not find any defunct processes belonging to 34835
[2024-05-15 16:39:47] 2024-05-15 20:39:32,532 | INFO     | ready for new job
[2024-05-15 16:39:47] 2024-05-15 20:39:32,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 16:39:47] 2024-05-15 20:39:32,534 | INFO     | *************************************
[2024-05-15 16:39:47] 2024-05-15 20:39:32,534 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 16:39:47] 2024-05-15 20:39:32,534 | INFO     | *************************************
[2024-05-15 16:39:47] 2024-05-15 20:39:32,534 | INFO     | 
[2024-05-15 16:39:47] 2024-05-15 20:39:32,539 | INFO     | architecture information:
[2024-05-15 16:39:47] 2024-05-15 20:39:32,539 | INFO     | executing command: cat /etc/os-release
[2024-05-15 16:39:47] 2024-05-15 20:39:32,659 | INFO     | cat /etc/os-release:
[2024-05-15 16:39:47] NAME="CentOS Linux"
[2024-05-15 16:39:47] VERSION="7 (Core)"
[2024-05-15 16:39:47] ID="centos"
[2024-05-15 16:39:47] ID_LIKE="rhel fedora"
[2024-05-15 16:39:47] VERSION_ID="7"
[2024-05-15 16:39:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 16:39:47] ANSI_COLOR="0;31"
[2024-05-15 16:39:47] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 16:39:47] HOME_URL="https://www.centos.org/"
[2024-05-15 16:39:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 16:39:47] 
[2024-05-15 16:39:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 16:39:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 16:39:47] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 16:39:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 16:39:47] 
[2024-05-15 16:39:47] 2024-05-15 20:39:32,659 | INFO     | *************************************
[2024-05-15 16:39:47] 2024-05-15 20:39:33,164 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-05-15 16:39:47] 2024-05-15 20:39:33,293 | INFO     | sufficient remaining disk space (99163832320 B)
[2024-05-15 16:39:47] 2024-05-15 20:39:33,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 16:39:47] 2024-05-15 20:39:33,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 16:39:47] 2024-05-15 20:39:33,295 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 16:39:47] 2024-05-15 20:39:33,295 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 16:39:47] 2024-05-15 20:39:33,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 16:39:47] 2024-05-15 20:39:33,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 16:39:47] 2024-05-15 20:39:33,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 16:39:47] 2024-05-15 20:39:33,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 16:39:47] 2024-05-15 20:39:33,296 | INFO     | aborting loop
[2024-05-15 16:39:47] 2024-05-15 20:39:33,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 16:39:47] 2024-05-15 20:39:34,299 | INFO     | [job] retrieve thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:34,301 | INFO     | [job] job monitor thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:34,305 | INFO     | [job] queue monitor thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:34,436 | INFO     | all data control threads have been joined
[2024-05-15 16:39:47] 2024-05-15 20:39:34,484 | INFO     | all payload control threads have been joined
[2024-05-15 16:39:47] 2024-05-15 20:39:34,597 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:34,692 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:34,698 | INFO     | [job] validate thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:34,754 | INFO     | [data] copytool_in thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:34,997 | INFO     | all job control threads have been joined
[2024-05-15 16:39:47] 2024-05-15 20:39:35,236 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:35,302 | INFO     | [data] copytool_out thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:35,445 | INFO     | [data] control thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:35,490 | INFO     | [payload] control thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:35,567 | INFO     | [payload] validate_post thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:35,575 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:35,718 | INFO     | [payload] failed_post thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:35,929 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 16:39:47] 2024-05-15 20:39:36,002 | INFO     | [job] control thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:39,948 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 16:39:47] 2024-05-15 20:39:40,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139806848247616)>', '<ExcThread(monitor, started 139806285756160)>']
[2024-05-15 16:39:47] 2024-05-15 20:39:41,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 16:39:47] 2024-05-15 20:39:41,343 | INFO     | [monitor] control thread has ended
[2024-05-15 16:39:47] 2024-05-15 20:39:45,533 | INFO     | all workflow threads have been joined
[2024-05-15 16:39:47] 2024-05-15 20:39:45,533 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 16:39:47] 2024-05-15 20:39:45,534 | INFO     | traces error code: 0
[2024-05-15 16:39:47] 2024-05-15 20:39:45,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 16:39:47] 2024-05-15 20:39:45,691 [wrapper] ==== pilot stdout END ====
[2024-05-15 16:39:47] 2024-05-15 20:39:45,694 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 16:39:47] 2024-05-15 20:39:45,698 [wrapper] pilotpid: 61475
[2024-05-15 16:39:47] 2024-05-15 20:39:45,709 [wrapper] Pilot exit status: 0
[2024-05-15 16:39:47] 2024-05-15 20:39:45,825 [wrapper] pandaids: 6206778234
[2024-05-15 16:39:47] 2024-05-15 20:39:46,003 [wrapper] cleanup: SIGTERM to supervisor_pilot 30868 61476
[2024-05-15 16:39:47] 2024-05-15 20:39:46,023 [wrapper] Test setup, not cleaning
[2024-05-15 16:39:47] 2024-05-15 20:39:46,067 [wrapper] ==== wrapper stdout END ====
[2024-05-15 16:39:47] 2024-05-15 20:39:46,107 [wrapper] ==== wrapper stderr END ====
[2024-05-15 16:39:47] 2024-05-15 20:39:46,143 [wrapper] apfmon messages muted
[2024-05-15 16:39:47]  *** Error codes and diagnostics ***
[2024-05-15 16:39:47]     "exeErrorCode": 0,
[2024-05-15 16:39:47]     "exeErrorDiag": "",
[2024-05-15 16:39:47]     "pilotErrorCode": 0,
[2024-05-15 16:39:47]     "pilotErrorDiag": "",
[2024-05-15 16:39:47]  *** Listing of results directory ***
[2024-05-15 16:39:47] total 820820
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas    467845 May 15 09:14 pilot3.tar.gz
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas      5633 May 15 09:30 queuedata.json
[2024-05-15 16:39:47] -rwx------ 1 boincer umatlas     32251 May 15 09:31 runpilot2-wrapper.sh
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas       100 May 15 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 16:39:47] -rwxr-xr-x 1 boincer umatlas      7986 May 15 13:31 run_atlas
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas       105 May 15 13:31 job.xml
[2024-05-15 16:39:47] -rw-r--r-- 2 boincer umatlas 602328138 May 15 13:31 EVNT.38776100._000231.pool.root.1
[2024-05-15 16:39:47] -rw-r--r-- 2 boincer umatlas     17537 May 15 13:31 start_atlas.sh
[2024-05-15 16:39:47] drwxrwx--x 2 boincer umatlas      4096 May 15 13:31 shared
[2024-05-15 16:39:47] -rw-r--r-- 2 boincer umatlas    480007 May 15 13:31 input.tar.gz
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas         0 May 15 13:31 boinc_lockfile
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas      2640 May 15 13:31 pandaJob.out
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas       467 May 15 13:31 setup.sh.local
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas   1011265 May 15 13:33 agis_schedconf.cvmfs.json
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas   1324701 May 15 13:33 cric_ddmendpoints.json
[2024-05-15 16:39:47] drwx------ 4 boincer umatlas      4096 May 15 13:33 pilot3
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas      6387 May 15 16:36 init_data.xml
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas 231861350 May 15 16:37 HITS.38776104._005861.pool.root.1
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas       532 May 15 16:37 boinc_task_state.xml
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas      1089 May 15 16:38 memory_monitor_summary.json
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas         0 May 15 16:38 agis_ddmendpoints.agis.ALL.json
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas    366303 May 15 16:38 log.38776104._005861.job.log.tgz.1
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas        95 May 15 16:39 pilot_heartbeat.json
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas      7763 May 15 16:39 heartbeat.json
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas      8192 May 15 16:39 boinc_mmap_file
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas        28 May 15 16:39 wrapper_checkpoint.txt
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas      4334 May 15 16:39 pilotlog.txt
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas   1036237 May 15 16:39 log.38776104._005861.job.log.1
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas       357 May 15 16:39 output.list
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas       620 May 15 16:39 runtime_log
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas   1423360 May 15 16:39 result.tar.gz
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas     11400 May 15 16:39 runtime_log.err
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas       650 May 15 16:39 69zNDm7tTR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmfTJKDmvQH9hn.diag
[2024-05-15 16:39:47] -rw-r--r-- 1 boincer umatlas     21937 May 15 16:39 stderr.txt
[2024-05-15 16:39:47] HITS file was successfully produced:
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas 231861350 May 15 16:37 shared/HITS.pool.root.1
[2024-05-15 16:39:47]  *** Contents of shared directory: ***
[2024-05-15 16:39:47] total 816532
[2024-05-15 16:39:47] -rw-r--r-- 2 boincer umatlas 602328138 May 15 13:31 ATLAS.root_0
[2024-05-15 16:39:47] -rw-r--r-- 2 boincer umatlas     17537 May 15 13:31 start_atlas.sh
[2024-05-15 16:39:47] -rw-r--r-- 2 boincer umatlas    480007 May 15 13:31 input.tar.gz
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas 231861350 May 15 16:37 HITS.pool.root.1
[2024-05-15 16:39:47] -rw------- 1 boincer umatlas   1423360 May 15 16:39 result.tar.gz
16:39:49 (9501): run_atlas exited; CPU time 36049.559594
16:39:49 (9501): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN