Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:08:33 (3738708): wrapper (7.7.26015): starting
13:08:33 (3738708): wrapper: running run_atlas (--nthreads 8)
[2024-05-15 13:08:33] Arguments: --nthreads 8
[2024-05-15 13:08:33] Threads: 8
[2024-05-15 13:08:33] Checking for CVMFS
[2024-05-15 13:08:34] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 13:08:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 13:08:34] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 13:08:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 13:08:35] 2.11.2.0 911815 3934 79984 132767 1 241 17319244 18432001 4541 130560 0 17285012 99.974 1397259 6684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-15 13:08:35] CVMFS is ok
[2024-05-15 13:08:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 13:08:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 13:08:35] Further information can be found at the LHC@home message board.
[2024-05-15 13:08:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 13:08:35] Checking for apptainer binary...
[2024-05-15 13:08:35] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 13:08:35] Running /usr/bin/apptainer --version
[2024-05-15 13:08:35] apptainer version 1.2.4-1.el7
[2024-05-15 13:08:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 13:08:36] gc-9-36.aglt2.org
[2024-05-15 13:08:36] apptainer works
[2024-05-15 13:08:36] Set ATHENA_PROC_NUMBER=8
[2024-05-15 13:08:36] Set ATHENA_CORE_NUMBER=8
[2024-05-15 13:08:36] Starting ATLAS job with PandaID=6206778135
[2024-05-15 13:08:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 14:46:18]  *** The last 200 lines of the pilot log: ***
[2024-05-15 14:46:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-15 14:46:18]  is_tar=False
[2024-05-15 14:46:18]  lfn=log.38776104._005767.job.log.tgz.1
[2024-05-15 14:46:18]  mtime=0
[2024-05-15 14:46:18]  protocol_id=None
[2024-05-15 14:46:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-15 14:46:18]  replicas=None
[2024-05-15 14:46:18]  scope=mc23_13p6TeV
[2024-05-15 14:46:18]  status=None
[2024-05-15 14:46:18]  status_code=0
[2024-05-15 14:46:18]  storage_token=
[2024-05-15 14:46:18]  surl=/data/boinchome/slots/2/PanDA_Pilot-6206778135/log.38776104._005767.job.log.tgz.1
[2024-05-15 14:46:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/b1/log.38776104._005767.job.log.tgz.1
[2024-05-15 14:46:18]  workdir=None
[2024-05-15 14:46:18] ]
[2024-05-15 14:46:18] 2024-05-15 18:45:47,793 | INFO     | transferring file log.38776104._005767.job.log.tgz.1 from /data/boinchome/slots/2/PanDA_Pilot-6206778135/log.38776104._005767.job.log.tgz.1 to /data/boinchome/slot
[2024-05-15 14:46:18] 2024-05-15 18:45:47,793 | INFO     | executing command: /usr/bin/env mv /data/boinchome/slots/2/PanDA_Pilot-6206778135/log.38776104._005767.job.log.tgz.1 /data/boinchome/slots/2/log.38776104._005767.j
[2024-05-15 14:46:18] 2024-05-15 18:45:47,817 | INFO     | adding to output.list: log.38776104._005767.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/b1/log.38776104._005767.job.log.tg
[2024-05-15 14:46:18] 2024-05-15 18:45:47,818 | INFO     | summary of transferred files:
[2024-05-15 14:46:18] 2024-05-15 18:45:47,818 | INFO     |  -- lfn=log.38776104._005767.job.log.tgz.1, status_code=0, status=transferred
[2024-05-15 14:46:18] 2024-05-15 18:45:47,818 | INFO     | stage-out finished correctly
[2024-05-15 14:46:18] 2024-05-15 18:45:48,110 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-15 14:46:18] 2024-05-15 18:45:48,274 | INFO     | job 6206778135 has state=finished
[2024-05-15 14:46:18] 2024-05-15 18:45:48,274 | INFO     | preparing for final server update for job 6206778135 in state='finished'
[2024-05-15 14:46:18] 2024-05-15 18:45:48,275 | INFO     | this job has now completed (state=finished)
[2024-05-15 14:46:18] 2024-05-15 18:45:48,275 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-15 14:46:18] 2024-05-15 18:45:48,275 | INFO     | job 6206778135 has finished - writing final server update
[2024-05-15 14:46:18] 2024-05-15 18:45:48,275 | INFO     | total number of processed events: 400 (read)
[2024-05-15 14:46:18] 2024-05-15 18:45:48,277 | INFO     | executing command: lscpu
[2024-05-15 14:46:18] 2024-05-15 18:45:48,359 | INFO     | found 24 cores (12 cores per socket, 2 sockets)
[2024-05-15 14:46:18] 2024-05-15 18:45:48,360 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-15 14:46:18] 2024-05-15 18:45:48,413 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-15 14:46:18] 2024-05-15 18:45:49,966 | INFO     | monitor loop #443: job 0:6206778135 is in state 'finished'
[2024-05-15 14:46:18] 2024-05-15 18:45:49,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 14:46:18] 2024-05-15 18:45:52,476 | INFO     | monitor loop #444: job 0:6206778135 is in state 'finished'
[2024-05-15 14:46:18] 2024-05-15 18:45:52,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 14:46:18] 2024-05-15 18:45:54,979 | INFO     | monitor loop #445: job 0:6206778135 is in state 'finished'
[2024-05-15 14:46:18] 2024-05-15 18:45:54,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 14:46:18] 2024-05-15 18:45:56,853 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-15 14:46:18] 2024-05-15 18:45:56,854 | INFO     | using path: /data/boinchome/slots/2/PanDA_Pilot-6206778135/memory_monitor_summary.json (trf name=prmon)
[2024-05-15 14:46:18] 2024-05-15 18:45:56,855 | INFO     | extracted standard info from prmon json
[2024-05-15 14:46:18] 2024-05-15 18:45:56,855 | INFO     | extracted standard memory fields from prmon json
[2024-05-15 14:46:18] 2024-05-15 18:45:56,855 | WARNING  | GPU info not found in prmon json
[2024-05-15 14:46:18] 2024-05-15 18:45:56,855 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-15 14:46:18] 2024-05-15 18:45:56,855 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-15 14:46:18] 2024-05-15 18:45:56,857 | INFO     | fitting pss+swap vs Time
[2024-05-15 14:46:18] 2024-05-15 18:45:56,857 | INFO     | model: linear, x: [1715793276.0, 1715793337.0, 1715793398.0, 1715793459.0, 1715793520.0, 1715793581.0, 1715793642.0, 1715793703.0, 1715793764.0, 1715793825.0, 1715
[2024-05-15 14:46:18] 2024-05-15 18:45:56,857 | INFO     | sum of square deviations: 211285822.0
[2024-05-15 14:46:18] 2024-05-15 18:45:56,858 | INFO     | sum of deviations: 4795807251.000001
[2024-05-15 14:46:18] 2024-05-15 18:45:56,858 | INFO     | mean x: 1715795929.5
[2024-05-15 14:46:18] 2024-05-15 18:45:56,858 | INFO     | mean y: 2522271.8181818184
[2024-05-15 14:46:18] 2024-05-15 18:45:56,858 | INFO     | -- intersect: -38942952072.08922
[2024-05-15 14:46:18] 2024-05-15 18:45:56,858 | INFO     | intersect: -38942952072.08922
[2024-05-15 14:46:18] 2024-05-15 18:45:56,858 | INFO     | chi2: 0.13415767835390466
[2024-05-15 14:46:18] 2024-05-15 18:45:56,858 | INFO     | -- intersect: -38942952072.08922
[2024-05-15 14:46:18] 2024-05-15 18:45:56,858 | INFO     | current memory leak: 22.70 B/s (using 88 data points, chi2=0.13)
[2024-05-15 14:46:18] 2024-05-15 18:45:56,859 | INFO     | ..............................
[2024-05-15 14:46:18] 2024-05-15 18:45:56,859 | INFO     | . Timing measurements:
[2024-05-15 14:46:18] 2024-05-15 18:45:56,859 | INFO     | . get job = 0 s
[2024-05-15 14:46:18] 2024-05-15 18:45:56,859 | INFO     | . initial setup = 1 s
[2024-05-15 14:46:18] 2024-05-15 18:45:56,859 | INFO     | . payload setup = 7 s
[2024-05-15 14:46:18] 2024-05-15 18:45:56,859 | INFO     | . stage-in = 0 s
[2024-05-15 14:46:18] 2024-05-15 18:45:56,859 | INFO     | . payload execution = 5784 s
[2024-05-15 14:46:18] 2024-05-15 18:45:56,859 | INFO     | . stage-out = 0 s
[2024-05-15 14:46:18] 2024-05-15 18:45:56,859 | INFO     | . log creation = 0 s
[2024-05-15 14:46:18] 2024-05-15 18:45:56,859 | INFO     | ..............................
[2024-05-15 14:46:18] 2024-05-15 18:45:56,939 | INFO     | 
[2024-05-15 14:46:18] 2024-05-15 18:45:56,939 | INFO     | job summary report
[2024-05-15 14:46:18] 2024-05-15 18:45:56,939 | INFO     | --------------------------------------------------
[2024-05-15 14:46:18] 2024-05-15 18:45:56,939 | INFO     | PanDA job id: 6206778135
[2024-05-15 14:46:18] 2024-05-15 18:45:56,939 | INFO     | task id: 38776104
[2024-05-15 14:46:18] 2024-05-15 18:45:56,939 | INFO     | errors: (none)
[2024-05-15 14:46:18] 2024-05-15 18:45:56,939 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 14:46:18] 2024-05-15 18:45:56,939 | INFO     | pilot state: finished 
[2024-05-15 14:46:18] 2024-05-15 18:45:56,939 | INFO     | transexitcode: 0
[2024-05-15 14:46:18] 2024-05-15 18:45:56,939 | INFO     | exeerrorcode: 0
[2024-05-15 14:46:18] 2024-05-15 18:45:56,939 | INFO     | exeerrordiag: 
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | exitcode: 0
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | exitmsg: OK
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | cpuconsumptiontime: 36865 s
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | nevents: 400
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | neventsw: 0
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | pid: 3750869
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | pgrp: 3750869
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | corecount: 8
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | event service: False
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | sizes: {0: 2391245, 1: 2392180, 6: 2392386, 12: 2392414, 5795: 2419025, 5796: 2427987, 5797: 2428171, 5805: 2428341}
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | --------------------------------------------------
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | 
[2024-05-15 14:46:18] 2024-05-15 18:45:56,940 | INFO     | executing command: ls -lF /data/boinchome/slots/2
[2024-05-15 14:46:18] 2024-05-15 18:45:57,023 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,024 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,024 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,024 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,024 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,024 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,024 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,024 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,024 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,025 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 14:46:18] 2024-05-15 18:45:57,025 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,025 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 14:46:18] 2024-05-15 18:45:57,025 | INFO     | job 6206778135 has completed (purged errors)
[2024-05-15 14:46:18] 2024-05-15 18:45:57,025 | INFO     | overall cleanup function is called
[2024-05-15 14:46:18] 2024-05-15 18:45:58,039 | INFO     | --- collectZombieJob: --- 10, [3750869]
[2024-05-15 14:46:18] 2024-05-15 18:45:58,039 | INFO     | zombie collector waiting for pid 3750869
[2024-05-15 14:46:18] 2024-05-15 18:45:58,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 14:46:18] 2024-05-15 18:45:59,045 | INFO     | collected zombie processes
[2024-05-15 14:46:18] 2024-05-15 18:45:59,045 | INFO     | will now attempt to kill all subprocesses of pid=3750869
[2024-05-15 14:46:18] 2024-05-15 18:45:59,168 | INFO     | process IDs to be killed: [3750869] (in reverse order)
[2024-05-15 14:46:18] 2024-05-15 18:45:59,259 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 14:46:18] 2024-05-15 18:45:59,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 14:46:18] 2024-05-15 18:45:59,264 | INFO     | did not find any defunct processes belonging to 3750869
[2024-05-15 14:46:18] 2024-05-15 18:45:59,268 | INFO     | did not find any defunct processes belonging to 3750869
[2024-05-15 14:46:18] 2024-05-15 18:45:59,268 | INFO     | ready for new job
[2024-05-15 14:46:18] 2024-05-15 18:45:59,268 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 14:46:18] 2024-05-15 18:45:59,269 | INFO     | *************************************
[2024-05-15 14:46:18] 2024-05-15 18:45:59,269 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 14:46:18] 2024-05-15 18:45:59,269 | INFO     | *************************************
[2024-05-15 14:46:18] 2024-05-15 18:45:59,270 | INFO     | 
[2024-05-15 14:46:18] 2024-05-15 18:45:59,271 | INFO     | architecture information:
[2024-05-15 14:46:18] 2024-05-15 18:45:59,271 | INFO     | executing command: cat /etc/os-release
[2024-05-15 14:46:18] 2024-05-15 18:45:59,284 | INFO     | cat /etc/os-release:
[2024-05-15 14:46:18] NAME="CentOS Linux"
[2024-05-15 14:46:18] VERSION="7 (Core)"
[2024-05-15 14:46:18] ID="centos"
[2024-05-15 14:46:18] ID_LIKE="rhel fedora"
[2024-05-15 14:46:18] VERSION_ID="7"
[2024-05-15 14:46:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 14:46:18] ANSI_COLOR="0;31"
[2024-05-15 14:46:18] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 14:46:18] HOME_URL="https://www.centos.org/"
[2024-05-15 14:46:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 14:46:18] 
[2024-05-15 14:46:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 14:46:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 14:46:18] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 14:46:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 14:46:18] 
[2024-05-15 14:46:18] 2024-05-15 18:45:59,284 | INFO     | *************************************
[2024-05-15 14:46:18] 2024-05-15 18:45:59,787 | INFO     | executing command: df -mP /data/boinchome/slots/2
[2024-05-15 14:46:18] 2024-05-15 18:45:59,806 | INFO     | sufficient remaining disk space (905784066048 B)
[2024-05-15 14:46:18] 2024-05-15 18:45:59,806 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 14:46:18] 2024-05-15 18:45:59,807 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 14:46:18] 2024-05-15 18:45:59,807 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 14:46:18] 2024-05-15 18:45:59,807 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 14:46:18] 2024-05-15 18:45:59,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 14:46:18] 2024-05-15 18:45:59,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 14:46:18] 2024-05-15 18:45:59,994 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-15 14:46:18] 2024-05-15 18:45:59,994 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-15 14:46:18] 2024-05-15 18:45:59,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 14:46:18] 2024-05-15 18:45:59,995 | INFO     | will abort loop
[2024-05-15 14:46:18] 2024-05-15 18:46:00,196 | INFO     | all job control threads have been joined
[2024-05-15 14:46:18] 2024-05-15 18:46:00,496 | INFO     | all payload control threads have been joined
[2024-05-15 14:46:18] 2024-05-15 18:46:00,697 | INFO     | all data control threads have been joined
[2024-05-15 14:46:18] 2024-05-15 18:46:00,812 | INFO     | [job] retrieve thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:00,899 | INFO     | [data] copytool_in thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:00,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 14:46:18] 2024-05-15 18:46:01,001 | INFO     | [job] job monitor thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:01,202 | INFO     | [job] control thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:01,446 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:01,471 | INFO     | [payload] failed_post thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:01,501 | INFO     | [payload] control thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:01,702 | INFO     | [data] control thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:01,857 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:01,864 | INFO     | [job] validate thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:01,883 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:01,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 14:46:18] 2024-05-15 18:46:02,412 | INFO     | [payload] validate_post thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:02,939 | INFO     | [data] copytool_out thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:02,955 | INFO     | [job] queue monitor thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:03,298 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 14:46:18] 2024-05-15 18:46:07,307 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:10,389 | INFO     | job.realtimelogging is not enabled
[2024-05-15 14:46:18] 2024-05-15 18:46:11,394 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 14:46:18] 2024-05-15 18:46:13,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139980275816256)>', '<ExcThread(monitor, started 139979527272192)>']
[2024-05-15 14:46:18] 2024-05-15 18:46:13,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 14:46:18] 2024-05-15 18:46:13,886 | INFO     | [monitor] control thread has ended
[2024-05-15 14:46:18] 2024-05-15 18:46:18,088 | INFO     | all workflow threads have been joined
[2024-05-15 14:46:18] 2024-05-15 18:46:18,088 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 14:46:18] 2024-05-15 18:46:18,089 | INFO     | traces error code: 0
[2024-05-15 14:46:18] 2024-05-15 18:46:18,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 14:46:18] 2024-05-15 18:46:18,190 [wrapper] ==== pilot stdout END ====
[2024-05-15 14:46:18] 2024-05-15 18:46:18,193 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 14:46:18] 2024-05-15 18:46:18,196 [wrapper] pilotpid: 3744399
[2024-05-15 14:46:18] 2024-05-15 18:46:18,198 [wrapper] Pilot exit status: 0
[2024-05-15 14:46:18] 2024-05-15 18:46:18,218 [wrapper] pandaids: 6206778135
[2024-05-15 14:46:18] 2024-05-15 18:46:18,272 [wrapper] cleanup: SIGTERM to supervisor_pilot 4136972 3744400
[2024-05-15 14:46:18] 2024-05-15 18:46:18,274 [wrapper] Test setup, not cleaning
[2024-05-15 14:46:18] 2024-05-15 18:46:18,276 [wrapper] ==== wrapper stdout END ====
[2024-05-15 14:46:18] 2024-05-15 18:46:18,292 [wrapper] ==== wrapper stderr END ====
[2024-05-15 14:46:18] 2024-05-15 18:46:18,312 [wrapper] apfmon messages muted
[2024-05-15 14:46:18]  *** Error codes and diagnostics ***
[2024-05-15 14:46:18]     "exeErrorCode": 0,
[2024-05-15 14:46:18]     "exeErrorDiag": "",
[2024-05-15 14:46:18]     "pilotErrorCode": 0,
[2024-05-15 14:46:18]     "pilotErrorDiag": "",
[2024-05-15 14:46:18]  *** Listing of results directory ***
[2024-05-15 14:46:18] total 824760
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas    467845 May 15 09:14 pilot3.tar.gz
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas      5633 May 15 09:20 queuedata.json
[2024-05-15 14:46:18] -rwx------ 1 boincer umatlas     32251 May 15 09:21 runpilot2-wrapper.sh
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas       100 May 15 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 14:46:18] -rwxr-xr-x 1 boincer umatlas      7986 May 15 13:08 run_atlas
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas       105 May 15 13:08 job.xml
[2024-05-15 14:46:18] -rw-r--r-- 2 boincer umatlas 604173153 May 15 13:08 EVNT.38776100._000227.pool.root.1
[2024-05-15 14:46:18] -rw-r--r-- 2 boincer umatlas     17537 May 15 13:08 start_atlas.sh
[2024-05-15 14:46:18] drwxrwx--x 2 boincer umatlas      4096 May 15 13:08 shared
[2024-05-15 14:46:18] -rw-r--r-- 2 boincer umatlas    480008 May 15 13:08 input.tar.gz
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas         0 May 15 13:08 boinc_lockfile
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas      2640 May 15 13:08 pandaJob.out
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas       461 May 15 13:08 setup.sh.local
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas   1011281 May 15 13:08 agis_schedconf.cvmfs.json
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas         0 May 15 13:08 agis_ddmendpoints.agis.ALL.json
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas   1324701 May 15 13:08 cric_ddmendpoints.json
[2024-05-15 14:46:18] drwx------ 4 boincer umatlas      4096 May 15 13:08 pilot3
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas      9220 May 15 14:37 init_data.xml
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas 235023264 May 15 14:45 HITS.38776104._005767.pool.root.1
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas        95 May 15 14:45 pilot_heartbeat.json
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas       530 May 15 14:45 boinc_task_state.xml
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas      1049 May 15 14:45 memory_monitor_summary.json
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas    319792 May 15 14:45 log.38776104._005767.job.log.tgz.1
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas      7743 May 15 14:45 heartbeat.json
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas      8192 May 15 14:45 boinc_mmap_file
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas        27 May 15 14:45 wrapper_checkpoint.txt
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas      4594 May 15 14:46 pilotlog.txt
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas    595142 May 15 14:46 log.38776104._005767.job.log.1
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas       357 May 15 14:46 output.list
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas       620 May 15 14:46 runtime_log
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas    931840 May 15 14:46 result.tar.gz
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas       644 May 15 14:46 WMkNDmZkTR5n7Olcko1bjSoqABFKDmABFKDmOtvXDmRlYKDmfvkiAn.diag
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas     11381 May 15 14:46 runtime_log.err
[2024-05-15 14:46:18] -rw-r--r-- 1 boincer umatlas     21563 May 15 14:46 stderr.txt
[2024-05-15 14:46:18] HITS file was successfully produced:
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas 235023264 May 15 14:45 shared/HITS.pool.root.1
[2024-05-15 14:46:18]  *** Contents of shared directory: ***
[2024-05-15 14:46:18] total 820944
[2024-05-15 14:46:18] -rw-r--r-- 2 boincer umatlas 604173153 May 15 13:08 ATLAS.root_0
[2024-05-15 14:46:18] -rw-r--r-- 2 boincer umatlas     17537 May 15 13:08 start_atlas.sh
[2024-05-15 14:46:18] -rw-r--r-- 2 boincer umatlas    480008 May 15 13:08 input.tar.gz
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas 235023264 May 15 14:45 HITS.pool.root.1
[2024-05-15 14:46:18] -rw------- 1 boincer umatlas    931840 May 15 14:46 result.tar.gz
14:46:20 (3738708): run_atlas exited; CPU time 36717.999732
14:46:20 (3738708): called boinc_finish(0)

</stderr_txt>
]]>

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