Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:44:39 (232253): wrapper (7.7.26015): starting
10:44:39 (232253): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 10:44:39] Arguments: --nthreads 4
[2024-05-19 10:44:39] Threads: 4
[2024-05-19 10:44:39] Checking for CVMFS
[2024-05-19 10:44:39] No cvmfs_config command found, will try listing directly
[2024-05-19 10:44:39] CVMFS is ok
[2024-05-19 10:44:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 10:44:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 10:44:39] Further information can be found at the LHC@home message board.
[2024-05-19 10:44:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 10:44:39] Checking for apptainer binary...
[2024-05-19 10:44:39] which: no apptainer in ((null))
[2024-05-19 10:44:39] apptainer is not installed, using version from CVMFS
[2024-05-19 10:44:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 10:44:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-05-19 10:44:40] apptainer works
[2024-05-19 10:44:40] Set ATHENA_PROC_NUMBER=4
[2024-05-19 10:44:40] Set ATHENA_CORE_NUMBER=4
[2024-05-19 10:44:40] Starting ATLAS job with PandaID=6206778076
[2024-05-19 10:44:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 13:20:36]  *** The last 200 lines of the pilot log: ***
[2024-05-19 13:20:36] 2024-05-19 11:20:14,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 13:20:36] 2024-05-19 11:20:14,150 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 13:20:36] 2024-05-19 11:20:14,153 | INFO     | fitting pss+swap vs Time
[2024-05-19 13:20:36] 2024-05-19 11:20:14,153 | INFO     | model: linear, x: [1716108320.0, 1716108381.0, 1716108442.0, 1716108503.0, 1716108564.0, 1716108625.0, 1716108686.0, 1716108747.0, 1716108808.0, 1716108869.0, 1716
[2024-05-19 13:20:36] 2024-05-19 11:20:14,154 | INFO     | sum of square deviations: 1110539892.0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,155 | INFO     | sum of deviations: 56886255891.99999
[2024-05-19 13:20:36] 2024-05-19 11:20:14,155 | INFO     | mean x: 1716112956.0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,155 | INFO     | mean y: 2239097.3398692813
[2024-05-19 13:20:36] 2024-05-19 11:20:14,155 | INFO     | -- intersect: -87903869866.27449
[2024-05-19 13:20:36] 2024-05-19 11:20:14,155 | INFO     | intersect: -87903869866.27449
[2024-05-19 13:20:36] 2024-05-19 11:20:14,155 | INFO     | chi2: 4.572909204085201
[2024-05-19 13:20:36] 2024-05-19 11:20:14,155 | INFO     | model: linear, x: [1716108320.0, 1716108381.0, 1716108442.0, 1716108503.0, 1716108564.0, 1716108625.0, 1716108686.0, 1716108747.0, 1716108808.0, 1716108869.0, 1716
[2024-05-19 13:20:36] 2024-05-19 11:20:14,156 | INFO     | sum of square deviations: 1005179777.0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,156 | INFO     | sum of deviations: 63818881858.0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,156 | INFO     | mean x: 1716112803.5
[2024-05-19 13:20:36] 2024-05-19 11:20:14,157 | INFO     | mean y: 2248770.9594594594
[2024-05-19 13:20:36] 2024-05-19 11:20:14,157 | INFO     | -- intersect: -108953783540.43042
[2024-05-19 13:20:36] 2024-05-19 11:20:14,157 | INFO     | intersect: -108953783540.43042
[2024-05-19 13:20:36] 2024-05-19 11:20:14,157 | INFO     | chi2: 3.832401219763336
[2024-05-19 13:20:36] 2024-05-19 11:20:14,157 | INFO     | current chi2=3.832401219763336 (change=16.19336731331411 %)
[2024-05-19 13:20:36] 2024-05-19 11:20:14,157 | INFO     | right removable region: 147
[2024-05-19 13:20:36] 2024-05-19 11:20:14,158 | INFO     | model: linear, x: [1716108625.0, 1716108686.0, 1716108747.0, 1716108808.0, 1716108869.0, 1716108930.0, 1716108991.0, 1716109052.0, 1716109113.0, 1716109174.0, 1716
[2024-05-19 13:20:36] 2024-05-19 11:20:14,158 | INFO     | sum of square deviations: 1005179777.0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,158 | INFO     | sum of deviations: 23376889120.5
[2024-05-19 13:20:36] 2024-05-19 11:20:14,159 | INFO     | mean x: 1716113108.5
[2024-05-19 13:20:36] 2024-05-19 11:20:14,159 | INFO     | mean y: 2287421.2905405406
[2024-05-19 13:20:36] 2024-05-19 11:20:14,159 | INFO     | -- intersect: -39908370128.32019
[2024-05-19 13:20:36] 2024-05-19 11:20:14,159 | INFO     | intersect: -39908370128.32019
[2024-05-19 13:20:36] 2024-05-19 11:20:14,159 | INFO     | chi2: 2.2382601579011547
[2024-05-19 13:20:36] 2024-05-19 11:20:14,159 | INFO     | current chi2=2.2382601579011547 (change=51.05391211569194 %)
[2024-05-19 13:20:36] 2024-05-19 11:20:14,159 | INFO     | model: linear, x: [1716108930.0, 1716108991.0, 1716109052.0, 1716109113.0, 1716109174.0, 1716109235.0, 1716109296.0, 1716109357.0, 1716109418.0, 1716109479.0, 1716
[2024-05-19 13:20:36] 2024-05-19 11:20:14,159 | INFO     | sum of square deviations: 906703512.0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,160 | INFO     | sum of deviations: -3958469766.999999
[2024-05-19 13:20:36] 2024-05-19 11:20:14,160 | INFO     | mean x: 1716113261.0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,160 | INFO     | mean y: 2329763.4265734265
[2024-05-19 13:20:36] 2024-05-19 11:20:14,161 | INFO     | -- intersect: 7494505949.478755
[2024-05-19 13:20:36] 2024-05-19 11:20:14,161 | INFO     | intersect: 7494505949.478755
[2024-05-19 13:20:36] 2024-05-19 11:20:14,161 | INFO     | chi2: 0.8191929781139498
[2024-05-19 13:20:36] 2024-05-19 11:20:14,161 | INFO     | current chi2=0.8191929781139498 (change=63.40045748381111 %)
[2024-05-19 13:20:36] 2024-05-19 11:20:14,161 | INFO     | model: linear, x: [1716109235.0, 1716109296.0, 1716109357.0, 1716109418.0, 1716109479.0, 1716109540.0, 1716109601.0, 1716109662.0, 1716109723.0, 1716109784.0, 1716
[2024-05-19 13:20:36] 2024-05-19 11:20:14,161 | INFO     | sum of square deviations: 814878534.5
[2024-05-19 13:20:36] 2024-05-19 11:20:14,162 | INFO     | sum of deviations: -6630318506.0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,162 | INFO     | mean x: 1716113413.5
[2024-05-19 13:20:36] 2024-05-19 11:20:14,162 | INFO     | mean y: 2334093.0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,162 | INFO     | -- intersect: 13965615787.37611
[2024-05-19 13:20:36] 2024-05-19 11:20:14,162 | INFO     | intersect: 13965615787.37611
[2024-05-19 13:20:36] 2024-05-19 11:20:14,163 | INFO     | chi2: 0.7788451471670622
[2024-05-19 13:20:36] 2024-05-19 11:20:14,163 | INFO     | current chi2=0.7788451471670622 (change=4.925314550398301 %)
[2024-05-19 13:20:36] 2024-05-19 11:20:14,163 | INFO     | left removable region: 30
[2024-05-19 13:20:36] 2024-05-19 11:20:14,163 | INFO     | model: linear, x: [1716110150.0, 1716110211.0, 1716110272.0, 1716110333.0, 1716110394.0, 1716110455.0, 1716110516.0, 1716110577.0, 1716110638.0, 1716110699.0, 1716
[2024-05-19 13:20:36] 2024-05-19 11:20:14,163 | INFO     | sum of square deviations: 496597218.0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,164 | INFO     | sum of deviations: 2272694873.0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,164 | INFO     | mean x: 1716113688.0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,164 | INFO     | mean y: 2346934.487179487
[2024-05-19 13:20:36] 2024-05-19 11:20:14,164 | INFO     | -- intersect: -7851508542.010318
[2024-05-19 13:20:36] 2024-05-19 11:20:14,164 | INFO     | intersect: -7851508542.010318
[2024-05-19 13:20:36] 2024-05-19 11:20:14,164 | INFO     | chi2: 0.00011972363279498802
[2024-05-19 13:20:36] 2024-05-19 11:20:14,164 | INFO     | -- intersect: -7851508542.010318
[2024-05-19 13:20:36] 2024-05-19 11:20:14,165 | INFO     | current memory leak: 4.58 B/s (using 117 data points, chi2=0.00)
[2024-05-19 13:20:36] 2024-05-19 11:20:14,165 | INFO     | ..............................
[2024-05-19 13:20:36] 2024-05-19 11:20:14,165 | INFO     | . Timing measurements:
[2024-05-19 13:20:36] 2024-05-19 11:20:14,165 | INFO     | . get job = 0 s
[2024-05-19 13:20:36] 2024-05-19 11:20:14,165 | INFO     | . initial setup = 1 s
[2024-05-19 13:20:36] 2024-05-19 11:20:14,165 | INFO     | . payload setup = 7 s
[2024-05-19 13:20:36] 2024-05-19 11:20:14,165 | INFO     | . stage-in = 0 s
[2024-05-19 13:20:36] 2024-05-19 11:20:14,165 | INFO     | . payload execution = 9286 s
[2024-05-19 13:20:36] 2024-05-19 11:20:14,165 | INFO     | . stage-out = 0 s
[2024-05-19 13:20:36] 2024-05-19 11:20:14,166 | INFO     | . log creation = 0 s
[2024-05-19 13:20:36] 2024-05-19 11:20:14,166 | INFO     | ..............................
[2024-05-19 13:20:36] 2024-05-19 11:20:14,232 | INFO     | 
[2024-05-19 13:20:36] 2024-05-19 11:20:14,233 | INFO     | job summary report
[2024-05-19 13:20:36] 2024-05-19 11:20:14,233 | INFO     | --------------------------------------------------
[2024-05-19 13:20:36] 2024-05-19 11:20:14,233 | INFO     | PanDA job id: 6206778076
[2024-05-19 13:20:36] 2024-05-19 11:20:14,233 | INFO     | task id: 38776104
[2024-05-19 13:20:36] 2024-05-19 11:20:14,233 | INFO     | errors: (none)
[2024-05-19 13:20:36] 2024-05-19 11:20:14,233 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 13:20:36] 2024-05-19 11:20:14,233 | INFO     | pilot state: finished 
[2024-05-19 13:20:36] 2024-05-19 11:20:14,233 | INFO     | transexitcode: 0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,233 | INFO     | exeerrorcode: 0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,233 | INFO     | exeerrordiag: 
[2024-05-19 13:20:36] 2024-05-19 11:20:14,233 | INFO     | exitcode: 0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,234 | INFO     | exitmsg: OK
[2024-05-19 13:20:36] 2024-05-19 11:20:14,234 | INFO     | cpuconsumptiontime: 34305 s
[2024-05-19 13:20:36] 2024-05-19 11:20:14,234 | INFO     | nevents: 400
[2024-05-19 13:20:36] 2024-05-19 11:20:14,234 | INFO     | neventsw: 0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,234 | INFO     | pid: 248479
[2024-05-19 13:20:36] 2024-05-19 11:20:14,234 | INFO     | pgrp: 248479
[2024-05-19 13:20:36] 2024-05-19 11:20:14,234 | INFO     | corecount: 4
[2024-05-19 13:20:36] 2024-05-19 11:20:14,234 | INFO     | event service: False
[2024-05-19 13:20:36] 2024-05-19 11:20:14,234 | INFO     | sizes: {0: 2390694, 1: 2392241, 6: 2392447, 12: 2392475, 9297: 2420783, 9299: 2429765, 9303: 2429949, 9307: 2430119}
[2024-05-19 13:20:36] 2024-05-19 11:20:14,234 | INFO     | --------------------------------------------------
[2024-05-19 13:20:36] 2024-05-19 11:20:14,234 | INFO     | 
[2024-05-19 13:20:36] 2024-05-19 11:20:14,234 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2024-05-19 13:20:36] 2024-05-19 11:20:14,254 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,254 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,254 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,254 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,255 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 13:20:36] 2024-05-19 11:20:14,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,256 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 13:20:36] 2024-05-19 11:20:14,256 | INFO     | job 6206778076 has completed (purged errors)
[2024-05-19 13:20:36] 2024-05-19 11:20:14,256 | INFO     | overall cleanup function is called
[2024-05-19 13:20:36] 2024-05-19 11:20:15,263 | INFO     | --- collectZombieJob: --- 10, [248479]
[2024-05-19 13:20:36] 2024-05-19 11:20:15,263 | INFO     | zombie collector waiting for pid 248479
[2024-05-19 13:20:36] 2024-05-19 11:20:15,263 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 13:20:36] 2024-05-19 11:20:16,268 | INFO     | collected zombie processes
[2024-05-19 13:20:36] 2024-05-19 11:20:16,268 | INFO     | will now attempt to kill all subprocesses of pid=248479
[2024-05-19 13:20:36] 2024-05-19 11:20:16,542 | INFO     | process IDs to be killed: [248479] (in reverse order)
[2024-05-19 13:20:36] 2024-05-19 11:20:16,747 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 13:20:36] 2024-05-19 11:20:16,747 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 13:20:36] 2024-05-19 11:20:16,766 | INFO     | did not find any defunct processes belonging to 248479
[2024-05-19 13:20:36] 2024-05-19 11:20:16,781 | INFO     | did not find any defunct processes belonging to 248479
[2024-05-19 13:20:36] 2024-05-19 11:20:16,781 | INFO     | ready for new job
[2024-05-19 13:20:36] 2024-05-19 11:20:16,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 13:20:36] 2024-05-19 11:20:16,782 | INFO     | *************************************
[2024-05-19 13:20:36] 2024-05-19 11:20:16,783 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 13:20:36] 2024-05-19 11:20:16,783 | INFO     | *************************************
[2024-05-19 13:20:36] 2024-05-19 11:20:16,783 | INFO     | 
[2024-05-19 13:20:36] 2024-05-19 11:20:16,789 | INFO     | architecture information:
[2024-05-19 13:20:36] 2024-05-19 11:20:16,789 | INFO     | executing command: cat /etc/os-release
[2024-05-19 13:20:36] 2024-05-19 11:20:16,806 | INFO     | cat /etc/os-release:
[2024-05-19 13:20:36] NAME="CentOS Linux"
[2024-05-19 13:20:36] VERSION="7 (Core)"
[2024-05-19 13:20:36] ID="centos"
[2024-05-19 13:20:36] ID_LIKE="rhel fedora"
[2024-05-19 13:20:36] VERSION_ID="7"
[2024-05-19 13:20:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 13:20:36] ANSI_COLOR="0;31"
[2024-05-19 13:20:36] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 13:20:36] HOME_URL="https://www.centos.org/"
[2024-05-19 13:20:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 13:20:36] 
[2024-05-19 13:20:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 13:20:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 13:20:36] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 13:20:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 13:20:36] 
[2024-05-19 13:20:36] 2024-05-19 11:20:16,806 | INFO     | *************************************
[2024-05-19 13:20:36] 2024-05-19 11:20:17,309 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2024-05-19 13:20:36] 2024-05-19 11:20:17,331 | INFO     | sufficient remaining disk space (3103977897984 B)
[2024-05-19 13:20:36] 2024-05-19 11:20:17,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 13:20:36] 2024-05-19 11:20:17,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 13:20:36] 2024-05-19 11:20:17,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 13:20:36] 2024-05-19 11:20:17,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 13:20:36] 2024-05-19 11:20:17,332 | INFO     | aborting loop
[2024-05-19 13:20:36] 2024-05-19 11:20:17,871 | INFO     | all job control threads have been joined
[2024-05-19 13:20:36] 2024-05-19 11:20:17,915 | INFO     | all payload control threads have been joined
[2024-05-19 13:20:36] 2024-05-19 11:20:18,104 | INFO     | all data control threads have been joined
[2024-05-19 13:20:36] 2024-05-19 11:20:18,292 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 13:20:36] 2024-05-19 11:20:18,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 13:20:36] 2024-05-19 11:20:18,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 13:20:36] 2024-05-19 11:20:18,336 | INFO     | [job] retrieve thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:18,338 | INFO     | [job] job monitor thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:18,716 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:18,876 | INFO     | [job] control thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:18,920 | INFO     | [payload] control thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:18,973 | INFO     | [payload] failed_post thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:19,054 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:19,109 | INFO     | [data] control thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:19,145 | INFO     | [job] validate thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:19,227 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:19,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 13:20:36] 2024-05-19 11:20:19,338 | INFO     | [data] copytool_out thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:19,773 | INFO     | [data] copytool_in thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:19,814 | INFO     | [payload] validate_post thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:20,247 | INFO     | [job] queue monitor thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:20,269 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 13:20:36] 2024-05-19 11:20:24,274 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:27,885 | INFO     | job.realtimelogging is not enabled
[2024-05-19 13:20:36] 2024-05-19 11:20:28,890 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 13:20:36] 2024-05-19 11:20:30,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47324520973376)>', '<ExcThread(monitor, started 47324690122496)>']
[2024-05-19 13:20:36] 2024-05-19 11:20:31,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 13:20:36] 2024-05-19 11:20:31,356 | INFO     | [monitor] control thread has ended
[2024-05-19 13:20:36] 2024-05-19 11:20:35,675 | INFO     | all workflow threads have been joined
[2024-05-19 13:20:36] 2024-05-19 11:20:35,675 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 13:20:36] 2024-05-19 11:20:35,675 | INFO     | traces error code: 0
[2024-05-19 13:20:36] 2024-05-19 11:20:35,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 13:20:36] 2024-05-19 11:20:35,745 [wrapper] ==== pilot stdout END ====
[2024-05-19 13:20:36] 2024-05-19 11:20:35,749 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 13:20:36] 2024-05-19 11:20:35,752 [wrapper] pilotpid: 238192
[2024-05-19 13:20:36] 2024-05-19 11:20:35,754 [wrapper] Pilot exit status: 0
[2024-05-19 13:20:36] 2024-05-19 11:20:35,763 [wrapper] pandaids: 6206778076
[2024-05-19 13:20:36] 2024-05-19 11:20:35,860 [wrapper] cleanup: SIGTERM to supervisor_pilot  972591 238193
[2024-05-19 13:20:36] 2024-05-19 11:20:35,862 [wrapper] Test setup, not cleaning
[2024-05-19 13:20:36] 2024-05-19 11:20:35,866 [wrapper] ==== wrapper stdout END ====
[2024-05-19 13:20:36] 2024-05-19 11:20:35,869 [wrapper] ==== wrapper stderr END ====
[2024-05-19 13:20:36] 2024-05-19 11:20:35,873 [wrapper] apfmon messages muted
[2024-05-19 13:20:36]  *** Error codes and diagnostics ***
[2024-05-19 13:20:36]     "exeErrorCode": 0,
[2024-05-19 13:20:36]     "exeErrorDiag": "",
[2024-05-19 13:20:36]     "pilotErrorCode": 0,
[2024-05-19 13:20:36]     "pilotErrorDiag": "",
[2024-05-19 13:20:36]  *** Listing of results directory ***
[2024-05-19 13:20:36] total 823708
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc    467845 May 15 15:14 pilot3.tar.gz
[2024-05-19 13:20:36] -rwx------ 1 boinc boinc     32251 May 15 15:18 runpilot2-wrapper.sh
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc      5633 May 15 15:18 queuedata.json
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc       100 May 19 10:44 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 13:20:36] -rwxr-xr-x 1 boinc boinc      7986 May 19 10:44 run_atlas
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc       105 May 19 10:44 job.xml
[2024-05-19 13:20:36] -rw-r--r-- 2 boinc boinc     17537 May 19 10:44 start_atlas.sh
[2024-05-19 13:20:36] drwxrwx--x 2 boinc boinc      4096 May 19 10:44 shared
[2024-05-19 13:20:36] -rw-r--r-- 2 boinc boinc    480004 May 19 10:44 input.tar.gz
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc      6644 May 19 10:44 init_data.xml
[2024-05-19 13:20:36] -rw-r--r-- 2 boinc boinc 603795052 May 19 10:44 EVNT.38776100._000222.pool.root.1
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc         0 May 19 10:44 boinc_lockfile
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc      2641 May 19 10:44 pandaJob.out
[2024-05-19 13:20:36] -rw------- 1 boinc boinc       424 May 19 10:44 setup.sh.local
[2024-05-19 13:20:36] -rw------- 1 boinc boinc   1014045 May 19 10:44 agis_schedconf.cvmfs.json
[2024-05-19 13:20:36] -rw------- 1 boinc boinc         0 May 19 10:44 agis_ddmendpoints.agis.ALL.json
[2024-05-19 13:20:36] -rw------- 1 boinc boinc   1324701 May 19 10:44 cric_ddmendpoints.json
[2024-05-19 13:20:36] drwx------ 4 boinc boinc      4096 May 19 10:44 pilot3
[2024-05-19 13:20:36] -rw------- 1 boinc boinc 233628984 May 19 13:19 HITS.38776104._005708.pool.root.1
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc       531 May 19 13:19 boinc_task_state.xml
[2024-05-19 13:20:36] -rw------- 1 boinc boinc      1042 May 19 13:20 memory_monitor_summary.json
[2024-05-19 13:20:36] -rw------- 1 boinc boinc    285669 May 19 13:20 log.38776104._005708.job.log.tgz.1
[2024-05-19 13:20:36] -rw------- 1 boinc boinc      7717 May 19 13:20 heartbeat.json
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc      8192 May 19 13:20 boinc_mmap_file
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc        27 May 19 13:20 wrapper_checkpoint.txt
[2024-05-19 13:20:36] -rw------- 1 boinc boinc        95 May 19 13:20 pilot_heartbeat.json
[2024-05-19 13:20:36] -rw------- 1 boinc boinc      4294 May 19 13:20 pilotlog.txt
[2024-05-19 13:20:36] -rw------- 1 boinc boinc    975403 May 19 13:20 log.38776104._005708.job.log.1
[2024-05-19 13:20:36] -rw------- 1 boinc boinc       357 May 19 13:20 output.list
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc       620 May 19 13:20 runtime_log
[2024-05-19 13:20:36] -rw------- 1 boinc boinc   1280000 May 19 13:20 result.tar.gz
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc     11409 May 19 13:20 runtime_log.err
[2024-05-19 13:20:36] -rw------- 1 boinc boinc       657 May 19 13:20 cf1NDmhhTR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmFLOKDmAO4HFm.diag
[2024-05-19 13:20:36] -rw-r--r-- 1 boinc boinc     21255 May 19 13:20 stderr.txt
[2024-05-19 13:20:36] HITS file was successfully produced:
[2024-05-19 13:20:36] -rw------- 1 boinc boinc 233628984 May 19 13:19 shared/HITS.pool.root.1
[2024-05-19 13:20:36]  *** Contents of shared directory: ***
[2024-05-19 13:20:36] total 819552
[2024-05-19 13:20:36] -rw-r--r-- 2 boinc boinc     17537 May 19 10:44 start_atlas.sh
[2024-05-19 13:20:36] -rw-r--r-- 2 boinc boinc    480004 May 19 10:44 input.tar.gz
[2024-05-19 13:20:36] -rw-r--r-- 2 boinc boinc 603795052 May 19 10:44 ATLAS.root_0
[2024-05-19 13:20:36] -rw------- 1 boinc boinc 233628984 May 19 13:19 HITS.pool.root.1
[2024-05-19 13:20:36] -rw------- 1 boinc boinc   1280000 May 19 13:20 result.tar.gz
13:20:37 (232253): run_atlas exited; CPU time 34080.987372
13:20:37 (232253): called boinc_finish(0)

</stderr_txt>
]]>

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