Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:15:32 (668740): wrapper (7.7.26015): starting
21:15:32 (668740): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 21:15:32] Arguments: --nthreads 4
[2024-05-19 21:15:32] Threads: 4
[2024-05-19 21:15:32] Checking for CVMFS
[2024-05-19 21:15:32] No cvmfs_config command found, will try listing directly
[2024-05-19 21:15:32] CVMFS is ok
[2024-05-19 21:15:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 21:15:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 21:15:32] Further information can be found at the LHC@home message board.
[2024-05-19 21:15:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 21:15:32] Checking for apptainer binary...
[2024-05-19 21:15:32] which: no apptainer in ((null))
[2024-05-19 21:15:32] apptainer is not installed, using version from CVMFS
[2024-05-19 21:15:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 21:15:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-19 21:15:33] apptainer works
[2024-05-19 21:15:33] Set ATHENA_PROC_NUMBER=4
[2024-05-19 21:15:33] Set ATHENA_CORE_NUMBER=4
[2024-05-19 21:15:33] Starting ATLAS job with PandaID=6206778067
[2024-05-19 21:15:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 23:30:50]  *** The last 200 lines of the pilot log: ***
[2024-05-19 23:30:50] 2024-05-19 21:30:37,283 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 23:30:50] 2024-05-19 21:30:37,284 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 23:30:50] 2024-05-19 21:30:37,286 | INFO     | fitting pss+swap vs Time
[2024-05-19 23:30:50] 2024-05-19 21:30:37,286 | INFO     | model: linear, x: [1716146168.0, 1716146229.0, 1716146290.0, 1716146351.0, 1716146412.0, 1716146473.0, 1716146534.0, 1716146595.0, 1716146656.0, 1716146717.0, 1716
[2024-05-19 23:30:50] 2024-05-19 21:30:37,286 | INFO     | sum of square deviations: 729472282.0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,287 | INFO     | sum of deviations: 25552707727.999996
[2024-05-19 23:30:50] 2024-05-19 21:30:37,287 | INFO     | mean x: 1716150194.0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,287 | INFO     | mean y: 2283691.135338346
[2024-05-19 23:30:50] 2024-05-19 21:30:37,287 | INFO     | -- intersect: -60112795944.79316
[2024-05-19 23:30:50] 2024-05-19 21:30:37,287 | INFO     | intersect: -60112795944.79316
[2024-05-19 23:30:50] 2024-05-19 21:30:37,287 | INFO     | chi2: 4.383297444177953
[2024-05-19 23:30:50] 2024-05-19 21:30:37,288 | INFO     | model: linear, x: [1716146168.0, 1716146229.0, 1716146290.0, 1716146351.0, 1716146412.0, 1716146473.0, 1716146534.0, 1716146595.0, 1716146656.0, 1716146717.0, 1716
[2024-05-19 23:30:50] 2024-05-19 21:30:37,288 | INFO     | sum of square deviations: 650252192.0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,288 | INFO     | sum of deviations: 33049759374.0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,288 | INFO     | mean x: 1716150041.5
[2024-05-19 23:30:50] 2024-05-19 21:30:37,288 | INFO     | mean y: 2297631.796875
[2024-05-19 23:30:50] 2024-05-19 21:30:37,288 | INFO     | -- intersect: -87222853807.99268
[2024-05-19 23:30:50] 2024-05-19 21:30:37,289 | INFO     | intersect: -87222853807.99268
[2024-05-19 23:30:50] 2024-05-19 21:30:37,289 | INFO     | chi2: 3.6077942344938565
[2024-05-19 23:30:50] 2024-05-19 21:30:37,289 | INFO     | current chi2=3.6077942344938565 (change=17.692233291494887 %)
[2024-05-19 23:30:50] 2024-05-19 21:30:37,289 | INFO     | right removable region: 127
[2024-05-19 23:30:50] 2024-05-19 21:30:37,289 | INFO     | model: linear, x: [1716146473.0, 1716146534.0, 1716146595.0, 1716146656.0, 1716146717.0, 1716146778.0, 1716146839.0, 1716146900.0, 1716146961.0, 1716147022.0, 1716
[2024-05-19 23:30:50] 2024-05-19 21:30:37,289 | INFO     | sum of square deviations: 650252192.0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,290 | INFO     | sum of deviations: -2376936065.0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,290 | INFO     | mean x: 1716150346.5
[2024-05-19 23:30:50] 2024-05-19 21:30:37,290 | INFO     | mean y: 2337166.53125
[2024-05-19 23:30:50] 2024-05-19 21:30:37,290 | INFO     | -- intersect: 6275564234.035079
[2024-05-19 23:30:50] 2024-05-19 21:30:37,290 | INFO     | intersect: 6275564234.035079
[2024-05-19 23:30:50] 2024-05-19 21:30:37,290 | INFO     | chi2: 2.10989804643165
[2024-05-19 23:30:50] 2024-05-19 21:30:37,290 | INFO     | current chi2=2.10989804643165 (change=51.865049695997946 %)
[2024-05-19 23:30:50] 2024-05-19 21:30:37,290 | INFO     | model: linear, x: [1716146778.0, 1716146839.0, 1716146900.0, 1716146961.0, 1716147022.0, 1716147083.0, 1716147144.0, 1716147205.0, 1716147266.0, 1716147327.0, 1716
[2024-05-19 23:30:50] 2024-05-19 21:30:37,291 | INFO     | sum of square deviations: 576985702.0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,291 | INFO     | sum of deviations: -23397755177.0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,291 | INFO     | mean x: 1716150499.0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,291 | INFO     | mean y: 2380933.2601626017
[2024-05-19 23:30:50] 2024-05-19 21:30:37,291 | INFO     | -- intersect: 69595213274.34369
[2024-05-19 23:30:50] 2024-05-19 21:30:37,291 | INFO     | intersect: 69595213274.34369
[2024-05-19 23:30:50] 2024-05-19 21:30:37,291 | INFO     | chi2: 0.9045013107577442
[2024-05-19 23:30:50] 2024-05-19 21:30:37,292 | INFO     | current chi2=0.9045013107577442 (change=57.13056788277161 %)
[2024-05-19 23:30:50] 2024-05-19 21:30:37,292 | INFO     | model: linear, x: [1716147083.0, 1716147144.0, 1716147205.0, 1716147266.0, 1716147327.0, 1716147388.0, 1716147449.0, 1716147510.0, 1716147571.0, 1716147632.0, 1716
[2024-05-19 23:30:50] 2024-05-19 21:30:37,292 | INFO     | sum of square deviations: 509440249.5
[2024-05-19 23:30:50] 2024-05-19 21:30:37,292 | INFO     | sum of deviations: -22586996612.999996
[2024-05-19 23:30:50] 2024-05-19 21:30:37,292 | INFO     | mean x: 1716150651.5
[2024-05-19 23:30:50] 2024-05-19 21:30:37,292 | INFO     | mean y: 2378943.1525423727
[2024-05-19 23:30:50] 2024-05-19 21:30:37,293 | INFO     | -- intersect: 76091162644.22961
[2024-05-19 23:30:50] 2024-05-19 21:30:37,293 | INFO     | intersect: 76091162644.22961
[2024-05-19 23:30:50] 2024-05-19 21:30:37,293 | INFO     | chi2: 0.87342882805201
[2024-05-19 23:30:50] 2024-05-19 21:30:37,293 | INFO     | current chi2=0.87342882805201 (change=3.435316492764752 %)
[2024-05-19 23:30:50] 2024-05-19 21:30:37,293 | INFO     | left removable region: 30
[2024-05-19 23:30:50] 2024-05-19 21:30:37,293 | INFO     | model: linear, x: [1716147998.0, 1716148059.0, 1716148120.0, 1716148181.0, 1716148242.0, 1716148303.0, 1716148364.0, 1716148425.0, 1716148486.0, 1716148547.0, 1716
[2024-05-19 23:30:50] 2024-05-19 21:30:37,293 | INFO     | sum of square deviations: 282974608.0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,294 | INFO     | sum of deviations: -7235792427.999999
[2024-05-19 23:30:50] 2024-05-19 21:30:37,294 | INFO     | mean x: 1716150926.0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,294 | INFO     | mean y: 2379446.6082474226
[2024-05-19 23:30:50] 2024-05-19 21:30:37,294 | INFO     | -- intersect: 43885157351.740944
[2024-05-19 23:30:50] 2024-05-19 21:30:37,294 | INFO     | intersect: 43885157351.740944
[2024-05-19 23:30:50] 2024-05-19 21:30:37,294 | INFO     | chi2: 0.026841451376108657
[2024-05-19 23:30:50] 2024-05-19 21:30:37,294 | INFO     | -- intersect: 43885157351.740944
[2024-05-19 23:30:50] 2024-05-19 21:30:37,294 | INFO     | current memory leak: -25.57 B/s (using 97 data points, chi2=0.03)
[2024-05-19 23:30:50] 2024-05-19 21:30:37,295 | INFO     | ..............................
[2024-05-19 23:30:50] 2024-05-19 21:30:37,295 | INFO     | . Timing measurements:
[2024-05-19 23:30:50] 2024-05-19 21:30:37,295 | INFO     | . get job = 0 s
[2024-05-19 23:30:50] 2024-05-19 21:30:37,295 | INFO     | . initial setup = 1 s
[2024-05-19 23:30:50] 2024-05-19 21:30:37,295 | INFO     | . payload setup = 5 s
[2024-05-19 23:30:50] 2024-05-19 21:30:37,295 | INFO     | . stage-in = 0 s
[2024-05-19 23:30:50] 2024-05-19 21:30:37,295 | INFO     | . payload execution = 8064 s
[2024-05-19 23:30:50] 2024-05-19 21:30:37,295 | INFO     | . stage-out = 0 s
[2024-05-19 23:30:50] 2024-05-19 21:30:37,295 | INFO     | . log creation = 0 s
[2024-05-19 23:30:50] 2024-05-19 21:30:37,295 | INFO     | ..............................
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | 
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | job summary report
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | --------------------------------------------------
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | PanDA job id: 6206778067
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | task id: 38776104
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | errors: (none)
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | pilot state: finished 
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | transexitcode: 0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | exeerrorcode: 0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | exeerrordiag: 
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | exitcode: 0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | exitmsg: OK
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | cpuconsumptiontime: 29490 s
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | nevents: 400
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | neventsw: 0
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | pid: 680954
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | pgrp: 680954
[2024-05-19 23:30:50] 2024-05-19 21:30:37,363 | INFO     | corecount: 4
[2024-05-19 23:30:50] 2024-05-19 21:30:37,364 | INFO     | event service: False
[2024-05-19 23:30:50] 2024-05-19 21:30:37,364 | INFO     | sizes: {0: 2392212, 4: 2392418, 11: 2392446, 8073: 2420175, 8074: 2429212, 8075: 2429212, 8079: 2429510}
[2024-05-19 23:30:50] 2024-05-19 21:30:37,364 | INFO     | --------------------------------------------------
[2024-05-19 23:30:50] 2024-05-19 21:30:37,364 | INFO     | 
[2024-05-19 23:30:50] 2024-05-19 21:30:37,364 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/1
[2024-05-19 23:30:50] 2024-05-19 21:30:37,379 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,379 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,379 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,379 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,379 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,379 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,380 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,380 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,380 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,380 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,380 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,380 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,380 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,380 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,380 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,381 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 23:30:50] 2024-05-19 21:30:37,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,381 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 23:30:50] 2024-05-19 21:30:37,381 | INFO     | job 6206778067 has completed (purged errors)
[2024-05-19 23:30:50] 2024-05-19 21:30:37,381 | INFO     | overall cleanup function is called
[2024-05-19 23:30:50] 2024-05-19 21:30:38,389 | INFO     | --- collectZombieJob: --- 10, [680954]
[2024-05-19 23:30:50] 2024-05-19 21:30:38,389 | INFO     | zombie collector waiting for pid 680954
[2024-05-19 23:30:50] 2024-05-19 21:30:38,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 23:30:50] 2024-05-19 21:30:39,394 | INFO     | collected zombie processes
[2024-05-19 23:30:50] 2024-05-19 21:30:39,394 | INFO     | will now attempt to kill all subprocesses of pid=680954
[2024-05-19 23:30:50] 2024-05-19 21:30:39,601 | INFO     | process IDs to be killed: [680954] (in reverse order)
[2024-05-19 23:30:50] 2024-05-19 21:30:39,731 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 23:30:50] 2024-05-19 21:30:39,731 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 23:30:50] 2024-05-19 21:30:39,743 | INFO     | did not find any defunct processes belonging to 680954
[2024-05-19 23:30:50] 2024-05-19 21:30:39,752 | INFO     | did not find any defunct processes belonging to 680954
[2024-05-19 23:30:50] 2024-05-19 21:30:39,752 | INFO     | ready for new job
[2024-05-19 23:30:50] 2024-05-19 21:30:39,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 23:30:50] 2024-05-19 21:30:39,753 | INFO     | *************************************
[2024-05-19 23:30:50] 2024-05-19 21:30:39,754 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 23:30:50] 2024-05-19 21:30:39,754 | INFO     | *************************************
[2024-05-19 23:30:50] 2024-05-19 21:30:39,754 | INFO     | 
[2024-05-19 23:30:50] 2024-05-19 21:30:39,758 | INFO     | architecture information:
[2024-05-19 23:30:50] 2024-05-19 21:30:39,758 | INFO     | executing command: cat /etc/os-release
[2024-05-19 23:30:50] 2024-05-19 21:30:39,772 | INFO     | cat /etc/os-release:
[2024-05-19 23:30:50] NAME="CentOS Linux"
[2024-05-19 23:30:50] VERSION="7 (Core)"
[2024-05-19 23:30:50] ID="centos"
[2024-05-19 23:30:50] ID_LIKE="rhel fedora"
[2024-05-19 23:30:50] VERSION_ID="7"
[2024-05-19 23:30:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 23:30:50] ANSI_COLOR="0;31"
[2024-05-19 23:30:50] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 23:30:50] HOME_URL="https://www.centos.org/"
[2024-05-19 23:30:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 23:30:50] 
[2024-05-19 23:30:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 23:30:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 23:30:50] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 23:30:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 23:30:50] 
[2024-05-19 23:30:50] 2024-05-19 21:30:39,772 | INFO     | *************************************
[2024-05-19 23:30:50] 2024-05-19 21:30:40,275 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/1
[2024-05-19 23:30:50] 2024-05-19 21:30:40,297 | INFO     | sufficient remaining disk space (3003259027456 B)
[2024-05-19 23:30:50] 2024-05-19 21:30:40,297 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 23:30:50] 2024-05-19 21:30:40,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 23:30:50] 2024-05-19 21:30:40,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 23:30:50] 2024-05-19 21:30:40,298 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 23:30:50] 2024-05-19 21:30:40,298 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 23:30:50] 2024-05-19 21:30:40,299 | INFO     | aborting loop
[2024-05-19 23:30:50] 2024-05-19 21:30:40,300 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 23:30:50] 2024-05-19 21:30:40,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 23:30:50] 2024-05-19 21:30:40,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 23:30:50] 2024-05-19 21:30:40,364 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 23:30:50] 2024-05-19 21:30:40,589 | INFO     | all payload control threads have been joined
[2024-05-19 23:30:50] 2024-05-19 21:30:40,918 | INFO     | all job control threads have been joined
[2024-05-19 23:30:50] 2024-05-19 21:30:41,301 | INFO     | [job] job monitor thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:41,302 | INFO     | [job] retrieve thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:41,337 | INFO     | all data control threads have been joined
[2024-05-19 23:30:50] 2024-05-19 21:30:41,364 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:41,594 | INFO     | [payload] control thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:41,639 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:41,676 | INFO     | [payload] failed_post thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:41,924 | INFO     | [job] control thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:42,035 | INFO     | [job] validate thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:42,120 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:42,255 | INFO     | [data] copytool_in thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:42,280 | INFO     | [payload] validate_post thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:42,304 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:42,341 | INFO     | [data] control thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:42,368 | INFO     | [data] copytool_out thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:42,373 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 23:30:50] 2024-05-19 21:30:43,379 | INFO     | [job] queue monitor thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:44,305 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 23:30:50] 2024-05-19 21:30:44,625 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47057227674688)>', '<ExcThread(monitor, started 47057401026304)>']
[2024-05-19 23:30:50] 2024-05-19 21:30:45,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 23:30:50] 2024-05-19 21:30:45,325 | INFO     | [monitor] control thread has ended
[2024-05-19 23:30:50] 2024-05-19 21:30:49,650 | INFO     | all workflow threads have been joined
[2024-05-19 23:30:50] 2024-05-19 21:30:49,650 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 23:30:50] 2024-05-19 21:30:49,650 | INFO     | traces error code: 0
[2024-05-19 23:30:50] 2024-05-19 21:30:49,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 23:30:50] 2024-05-19 21:30:49,712 [wrapper] ==== pilot stdout END ====
[2024-05-19 23:30:50] 2024-05-19 21:30:49,719 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 23:30:50] 2024-05-19 21:30:49,721 [wrapper] pilotpid: 673391
[2024-05-19 23:30:50] 2024-05-19 21:30:49,723 [wrapper] Pilot exit status: 0
[2024-05-19 23:30:50] 2024-05-19 21:30:49,733 [wrapper] pandaids: 6206778067
[2024-05-19 23:30:50] 2024-05-19 21:30:49,821 [wrapper] cleanup: SIGTERM to supervisor_pilot 1239255 673392
[2024-05-19 23:30:50] 2024-05-19 21:30:49,823 [wrapper] Test setup, not cleaning
[2024-05-19 23:30:50] 2024-05-19 21:30:49,824 [wrapper] ==== wrapper stdout END ====
[2024-05-19 23:30:50] 2024-05-19 21:30:49,826 [wrapper] ==== wrapper stderr END ====
[2024-05-19 23:30:50] 2024-05-19 21:30:49,830 [wrapper] apfmon messages muted
[2024-05-19 23:30:50]  *** Error codes and diagnostics ***
[2024-05-19 23:30:50]     "exeErrorCode": 0,
[2024-05-19 23:30:50]     "exeErrorDiag": "",
[2024-05-19 23:30:50]     "pilotErrorCode": 0,
[2024-05-19 23:30:50]     "pilotErrorDiag": "",
[2024-05-19 23:30:50]  *** Listing of results directory ***
[2024-05-19 23:30:50] total 822136
[2024-05-19 23:30:50] -rwx------ 1 boinc boinc     32251 May 15 15:14 runpilot2-wrapper.sh
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc    467845 May 15 15:14 pilot3.tar.gz
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc      5633 May 15 15:14 queuedata.json
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc       100 May 19 20:19 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 23:30:50] -rwxr-xr-x 1 boinc boinc      7986 May 19 20:19 run_atlas
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc       105 May 19 20:19 job.xml
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc      6643 May 19 21:15 init_data.xml
[2024-05-19 23:30:50] -rw-r--r-- 2 boinc boinc 603721926 May 19 21:15 EVNT.38776100._000221.pool.root.1
[2024-05-19 23:30:50] -rw-r--r-- 2 boinc boinc     17537 May 19 21:15 start_atlas.sh
[2024-05-19 23:30:50] drwxrwx--x 2 boinc boinc      4096 May 19 21:15 shared
[2024-05-19 23:30:50] -rw-r--r-- 2 boinc boinc    480001 May 19 21:15 input.tar.gz
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc         0 May 19 21:15 boinc_lockfile
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc      2640 May 19 21:15 pandaJob.out
[2024-05-19 23:30:50] -rw------- 1 boinc boinc       424 May 19 21:15 setup.sh.local
[2024-05-19 23:30:50] -rw------- 1 boinc boinc   1014069 May 19 21:15 agis_schedconf.cvmfs.json
[2024-05-19 23:30:50] -rw------- 1 boinc boinc         0 May 19 21:15 agis_ddmendpoints.agis.ALL.json
[2024-05-19 23:30:50] -rw------- 1 boinc boinc   1324701 May 19 21:15 cric_ddmendpoints.json
[2024-05-19 23:30:50] drwx------ 4 boinc boinc      4096 May 19 21:15 pilot3
[2024-05-19 23:30:50] -rw------- 1 boinc boinc 232363616 May 19 23:30 HITS.38776104._005699.pool.root.1
[2024-05-19 23:30:50] -rw------- 1 boinc boinc        95 May 19 23:30 pilot_heartbeat.json
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc      8192 May 19 23:30 boinc_mmap_file
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc        27 May 19 23:30 wrapper_checkpoint.txt
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc       530 May 19 23:30 boinc_task_state.xml
[2024-05-19 23:30:50] -rw------- 1 boinc boinc      1042 May 19 23:30 memory_monitor_summary.json
[2024-05-19 23:30:50] -rw------- 1 boinc boinc    292519 May 19 23:30 log.38776104._005699.job.log.tgz.1
[2024-05-19 23:30:50] -rw------- 1 boinc boinc      7724 May 19 23:30 heartbeat.json
[2024-05-19 23:30:50] -rw------- 1 boinc boinc      4345 May 19 23:30 pilotlog.txt
[2024-05-19 23:30:50] -rw------- 1 boinc boinc    830161 May 19 23:30 log.38776104._005699.job.log.1
[2024-05-19 23:30:50] -rw------- 1 boinc boinc       357 May 19 23:30 output.list
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc       620 May 19 23:30 runtime_log
[2024-05-19 23:30:50] -rw------- 1 boinc boinc   1146880 May 19 23:30 result.tar.gz
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc     11409 May 19 23:30 runtime_log.err
[2024-05-19 23:30:50] -rw------- 1 boinc boinc       656 May 19 23:30 BNYMDm7dTR5n7Olcko1bjSoqABFKDmABFKDmOtvXDmHlYKDmOL3lRn.diag
[2024-05-19 23:30:50] -rw-r--r-- 1 boinc boinc     21291 May 19 23:30 stderr.txt
[2024-05-19 23:30:50] HITS file was successfully produced:
[2024-05-19 23:30:50] -rw------- 1 boinc boinc 232363616 May 19 23:30 shared/HITS.pool.root.1
[2024-05-19 23:30:50]  *** Contents of shared directory: ***
[2024-05-19 23:30:50] total 818116
[2024-05-19 23:30:50] -rw-r--r-- 2 boinc boinc 603721926 May 19 21:15 ATLAS.root_0
[2024-05-19 23:30:50] -rw-r--r-- 2 boinc boinc     17537 May 19 21:15 start_atlas.sh
[2024-05-19 23:30:50] -rw-r--r-- 2 boinc boinc    480001 May 19 21:15 input.tar.gz
[2024-05-19 23:30:50] -rw------- 1 boinc boinc 232363616 May 19 23:30 HITS.pool.root.1
[2024-05-19 23:30:50] -rw------- 1 boinc boinc   1146880 May 19 23:30 result.tar.gz
23:30:52 (668740): run_atlas exited; CPU time 29310.782748
23:30:52 (668740): called boinc_finish(0)

</stderr_txt>
]]>

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