Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:52:22 (20060): wrapper (7.7.26015): starting
12:52:22 (20060): wrapper: running run_atlas (--nthreads 8)
[2024-05-15 12:52:22] Arguments: --nthreads 8
[2024-05-15 12:52:22] Threads: 8
[2024-05-15 12:52:22] Checking for CVMFS
[2024-05-15 12:52:23] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 12:52:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 12:52:24] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 12:52:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 12:52:25] 2.11.2.0 18811 2571 114252 132767 2 311 13138030 18432000 32994 130560 0 20383154 98.819 42931396 53391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-05-15 12:52:25] CVMFS is ok
[2024-05-15 12:52:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 12:52:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 12:52:25] Further information can be found at the LHC@home message board.
[2024-05-15 12:52:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 12:52:25] Checking for apptainer binary...
[2024-05-15 12:52:25] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 12:52:25] Running /usr/bin/apptainer --version
[2024-05-15 12:52:25] apptainer version 1.3.0-1.el7
[2024-05-15 12:52:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 12:52:39] c-212-7.aglt2.org
[2024-05-15 12:52:39] apptainer works
[2024-05-15 12:52:39] Set ATHENA_PROC_NUMBER=8
[2024-05-15 12:52:39] Set ATHENA_CORE_NUMBER=8
[2024-05-15 12:52:39] Starting ATLAS job with PandaID=6206733193
[2024-05-15 12:52:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 19:07:26]  *** The last 200 lines of the pilot log: ***
[2024-05-15 19:07:26] 2024-05-15 23:06:48,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 19:07:26] 2024-05-15 23:06:51,414 | INFO     | monitor loop #1613: job 0:6206733193 is in state 'finished'
[2024-05-15 19:07:26] 2024-05-15 23:06:51,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 19:07:26] 2024-05-15 23:06:53,930 | INFO     | monitor loop #1614: job 0:6206733193 is in state 'finished'
[2024-05-15 19:07:26] 2024-05-15 23:06:53,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 19:07:26] 2024-05-15 23:06:56,436 | INFO     | monitor loop #1615: job 0:6206733193 is in state 'finished'
[2024-05-15 19:07:26] 2024-05-15 23:06:56,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 19:07:26] 2024-05-15 23:06:58,945 | INFO     | monitor loop #1616: job 0:6206733193 is in state 'finished'
[2024-05-15 19:07:26] 2024-05-15 23:06:58,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 19:07:26] 2024-05-15 23:07:01,450 | INFO     | monitor loop #1617: job 0:6206733193 is in state 'finished'
[2024-05-15 19:07:26] 2024-05-15 23:07:01,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 19:07:26] 2024-05-15 23:07:03,955 | INFO     | monitor loop #1618: job 0:6206733193 is in state 'finished'
[2024-05-15 19:07:26] 2024-05-15 23:07:03,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 19:07:26] 2024-05-15 23:07:05,127 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-15 19:07:26] 2024-05-15 23:07:05,130 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6206733193/memory_monitor_summary.json (trf name=prmon)
[2024-05-15 19:07:26] 2024-05-15 23:07:05,131 | INFO     | extracted standard info from prmon json
[2024-05-15 19:07:26] 2024-05-15 23:07:05,131 | INFO     | extracted standard memory fields from prmon json
[2024-05-15 19:07:26] 2024-05-15 23:07:05,131 | WARNING  | GPU info not found in prmon json
[2024-05-15 19:07:26] 2024-05-15 23:07:05,131 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-15 19:07:26] 2024-05-15 23:07:05,131 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-15 19:07:26] 2024-05-15 23:07:05,143 | INFO     | fitting pss+swap vs Time
[2024-05-15 19:07:26] 2024-05-15 23:07:05,144 | INFO     | model: linear, x: [1715792360.0, 1715792421.0, 1715792482.0, 1715792543.0, 1715792604.0, 1715792665.0, 1715792726.0, 1715792787.0, 1715792848.0, 1715792909.0, 1715
[2024-05-15 19:07:26] 2024-05-15 23:07:05,144 | INFO     | sum of square deviations: 14588099619.955713
[2024-05-15 19:07:26] 2024-05-15 23:07:05,149 | INFO     | sum of deviations: 718215269114.263
[2024-05-15 19:07:26] 2024-05-15 23:07:05,149 | INFO     | mean x: 1715803340.0110803
[2024-05-15 19:07:26] 2024-05-15 23:07:05,149 | INFO     | mean y: 2339215.6842105263
[2024-05-15 19:07:26] 2024-05-15 23:07:05,150 | INFO     | -- intersect: -84471731410.17503
[2024-05-15 19:07:26] 2024-05-15 23:07:05,150 | INFO     | intersect: -84471731410.17503
[2024-05-15 19:07:26] 2024-05-15 23:07:05,150 | INFO     | chi2: 20.313765732316487
[2024-05-15 19:07:26] 2024-05-15 23:07:05,150 | INFO     | model: linear, x: [1715792360.0, 1715792421.0, 1715792482.0, 1715792543.0, 1715792604.0, 1715792665.0, 1715792726.0, 1715792787.0, 1715792848.0, 1715792909.0, 1715
[2024-05-15 19:07:26] 2024-05-15 23:07:05,151 | INFO     | sum of square deviations: 13990303584.955088
[2024-05-15 19:07:26] 2024-05-15 23:07:05,156 | INFO     | sum of deviations: 755725906544.135
[2024-05-15 19:07:26] 2024-05-15 23:07:05,156 | INFO     | mean x: 1715803187.511236
[2024-05-15 19:07:26] 2024-05-15 23:07:05,156 | INFO     | mean y: 2348678.966292135
[2024-05-15 19:07:26] 2024-05-15 23:07:05,156 | INFO     | -- intersect: -92681624292.69012
[2024-05-15 19:07:26] 2024-05-15 23:07:05,156 | INFO     | intersect: -92681624292.69012
[2024-05-15 19:07:26] 2024-05-15 23:07:05,157 | INFO     | chi2: 18.697978208311866
[2024-05-15 19:07:26] 2024-05-15 23:07:05,157 | INFO     | current chi2=18.697978208311866 (change=7.954150625229069 %)
[2024-05-15 19:07:26] 2024-05-15 23:07:05,157 | INFO     | right removable region: 355
[2024-05-15 19:07:26] 2024-05-15 23:07:05,160 | INFO     | model: linear, x: [1715792665.0, 1715792726.0, 1715792787.0, 1715792848.0, 1715792909.0, 1715792970.0, 1715793031.0, 1715793092.0, 1715793153.0, 1715793214.0, 1715
[2024-05-15 19:07:26] 2024-05-15 23:07:05,160 | INFO     | sum of square deviations: 13990301144.955088
[2024-05-15 19:07:26] 2024-05-15 23:07:05,162 | INFO     | sum of deviations: 600909373822.6903
[2024-05-15 19:07:26] 2024-05-15 23:07:05,162 | INFO     | mean x: 1715803492.511236
[2024-05-15 19:07:26] 2024-05-15 23:07:05,163 | INFO     | mean y: 2369125.452247191
[2024-05-15 19:07:26] 2024-05-15 23:07:05,163 | INFO     | -- intersect: -73694572177.30923
[2024-05-15 19:07:26] 2024-05-15 23:07:05,163 | INFO     | intersect: -73694572177.30923
[2024-05-15 19:07:26] 2024-05-15 23:07:05,166 | INFO     | chi2: 15.640183214099787
[2024-05-15 19:07:26] 2024-05-15 23:07:05,166 | INFO     | current chi2=15.640183214099787 (change=23.006972610605892 %)
[2024-05-15 19:07:26] 2024-05-15 23:07:05,166 | INFO     | left removable region: 10
[2024-05-15 19:07:26] 2024-05-15 23:07:05,167 | INFO     | model: linear, x: [1715792970.0, 1715793031.0, 1715793092.0, 1715793153.0, 1715793214.0, 1715793275.0, 1715793336.0, 1715793397.0, 1715793458.0, 1715793519.0, 1715
[2024-05-15 19:07:26] 2024-05-15 23:07:05,167 | INFO     | sum of square deviations: 12733105723.953611
[2024-05-15 19:07:26] 2024-05-15 23:07:05,169 | INFO     | sum of deviations: 548282984263.499
[2024-05-15 19:07:26] 2024-05-15 23:07:05,169 | INFO     | mean x: 1715803462.0115943
[2024-05-15 19:07:26] 2024-05-15 23:07:05,169 | INFO     | mean y: 2402769.875362319
[2024-05-15 19:07:26] 2024-05-15 23:07:05,169 | INFO     | -- intersect: -73879481426.81532
[2024-05-15 19:07:26] 2024-05-15 23:07:05,169 | INFO     | intersect: -73879481426.81532
[2024-05-15 19:07:26] 2024-05-15 23:07:05,170 | INFO     | chi2: 11.52903087385544
[2024-05-15 19:07:26] 2024-05-15 23:07:05,170 | INFO     | -- intersect: -73879481426.81532
[2024-05-15 19:07:26] 2024-05-15 23:07:05,170 | INFO     | current memory leak: 43.06 B/s (using 345 data points, chi2=11.53)
[2024-05-15 19:07:26] 2024-05-15 23:07:05,175 | INFO     | ..............................
[2024-05-15 19:07:26] 2024-05-15 23:07:05,175 | INFO     | . Timing measurements:
[2024-05-15 19:07:26] 2024-05-15 23:07:05,175 | INFO     | . get job = 0 s
[2024-05-15 19:07:26] 2024-05-15 23:07:05,175 | INFO     | . initial setup = 2 s
[2024-05-15 19:07:26] 2024-05-15 23:07:05,175 | INFO     | . payload setup = 79 s
[2024-05-15 19:07:26] 2024-05-15 23:07:05,175 | INFO     | . stage-in = 0 s
[2024-05-15 19:07:26] 2024-05-15 23:07:05,175 | INFO     | . payload execution = 22041 s
[2024-05-15 19:07:26] 2024-05-15 23:07:05,175 | INFO     | . stage-out = 5 s
[2024-05-15 19:07:26] 2024-05-15 23:07:05,175 | INFO     | . log creation = 0 s
[2024-05-15 19:07:26] 2024-05-15 23:07:05,175 | INFO     | ..............................
[2024-05-15 19:07:26] 2024-05-15 23:07:05,353 | INFO     | 
[2024-05-15 19:07:26] 2024-05-15 23:07:05,353 | INFO     | job summary report
[2024-05-15 19:07:26] 2024-05-15 23:07:05,353 | INFO     | --------------------------------------------------
[2024-05-15 19:07:26] 2024-05-15 23:07:05,353 | INFO     | PanDA job id: 6206733193
[2024-05-15 19:07:26] 2024-05-15 23:07:05,353 | INFO     | task id: 38920987
[2024-05-15 19:07:26] 2024-05-15 23:07:05,353 | INFO     | errors: (none)
[2024-05-15 19:07:26] 2024-05-15 23:07:05,353 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 19:07:26] 2024-05-15 23:07:05,353 | INFO     | pilot state: finished 
[2024-05-15 19:07:26] 2024-05-15 23:07:05,353 | INFO     | transexitcode: 0
[2024-05-15 19:07:26] 2024-05-15 23:07:05,353 | INFO     | exeerrorcode: 0
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | exeerrordiag: 
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | exitcode: 0
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | exitmsg: OK
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | cpuconsumptiontime: 84837 s
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | nevents: 400
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | neventsw: 0
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | pid: 95852
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | pgrp: 95852
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | corecount: 8
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | event service: False
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | sizes: {0: 2391264, 1: 2392028, 2: 2392227, 12: 2392227, 23: 2392255, 34: 2392283, 45: 2392439, 54: 2392673, 55: 2392701, 22161: 2426295, 22162: 2426294, 22169: 24
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | --------------------------------------------------
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | 
[2024-05-15 19:07:26] 2024-05-15 23:07:05,354 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-05-15 19:07:26] 2024-05-15 23:07:05,883 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,883 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,883 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,883 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 19:07:26] 2024-05-15 23:07:05,884 | INFO     | job 6206733193 has completed (purged errors)
[2024-05-15 19:07:26] 2024-05-15 23:07:05,885 | INFO     | overall cleanup function is called
[2024-05-15 19:07:26] 2024-05-15 23:07:06,912 | INFO     | --- collectZombieJob: --- 10, [95852]
[2024-05-15 19:07:26] 2024-05-15 23:07:06,912 | INFO     | zombie collector waiting for pid 95852
[2024-05-15 19:07:26] 2024-05-15 23:07:06,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 19:07:26] 2024-05-15 23:07:07,918 | INFO     | collected zombie processes
[2024-05-15 19:07:26] 2024-05-15 23:07:07,918 | INFO     | will now attempt to kill all subprocesses of pid=95852
[2024-05-15 19:07:26] 2024-05-15 23:07:08,583 | INFO     | process IDs to be killed: [95852] (in reverse order)
[2024-05-15 19:07:26] 2024-05-15 23:07:10,127 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 19:07:26] 2024-05-15 23:07:10,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 19:07:26] 2024-05-15 23:07:10,140 | INFO     | did not find any defunct processes belonging to 95852
[2024-05-15 19:07:26] 2024-05-15 23:07:10,150 | INFO     | did not find any defunct processes belonging to 95852
[2024-05-15 19:07:26] 2024-05-15 23:07:10,151 | INFO     | ready for new job
[2024-05-15 19:07:26] 2024-05-15 23:07:10,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 19:07:26] 2024-05-15 23:07:10,153 | INFO     | *************************************
[2024-05-15 19:07:26] 2024-05-15 23:07:10,153 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 19:07:26] 2024-05-15 23:07:10,153 | INFO     | *************************************
[2024-05-15 19:07:26] 2024-05-15 23:07:10,153 | INFO     | 
[2024-05-15 19:07:26] 2024-05-15 23:07:10,158 | INFO     | architecture information:
[2024-05-15 19:07:26] 2024-05-15 23:07:10,169 | INFO     | executing command: cat /etc/os-release
[2024-05-15 19:07:26] 2024-05-15 23:07:10,309 | INFO     | cat /etc/os-release:
[2024-05-15 19:07:26] NAME="CentOS Linux"
[2024-05-15 19:07:26] VERSION="7 (Core)"
[2024-05-15 19:07:26] ID="centos"
[2024-05-15 19:07:26] ID_LIKE="rhel fedora"
[2024-05-15 19:07:26] VERSION_ID="7"
[2024-05-15 19:07:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 19:07:26] ANSI_COLOR="0;31"
[2024-05-15 19:07:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 19:07:26] HOME_URL="https://www.centos.org/"
[2024-05-15 19:07:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 19:07:26] 
[2024-05-15 19:07:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 19:07:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 19:07:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 19:07:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 19:07:26] 
[2024-05-15 19:07:26] 2024-05-15 23:07:10,309 | INFO     | *************************************
[2024-05-15 19:07:26] 2024-05-15 23:07:10,812 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-05-15 19:07:26] 2024-05-15 23:07:10,930 | INFO     | sufficient remaining disk space (99266592768 B)
[2024-05-15 19:07:26] 2024-05-15 23:07:10,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 19:07:26] 2024-05-15 23:07:10,930 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 19:07:26] 2024-05-15 23:07:10,930 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 19:07:26] 2024-05-15 23:07:10,931 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 19:07:26] 2024-05-15 23:07:10,931 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 19:07:26] 2024-05-15 23:07:10,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 19:07:26] 2024-05-15 23:07:10,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 19:07:26] 2024-05-15 23:07:10,931 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 19:07:26] 2024-05-15 23:07:10,931 | INFO     | aborting loop
[2024-05-15 19:07:26] 2024-05-15 23:07:10,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 19:07:26] 2024-05-15 23:07:11,115 | INFO     | all data control threads have been joined
[2024-05-15 19:07:26] 2024-05-15 23:07:11,440 | INFO     | all job control threads have been joined
[2024-05-15 19:07:26] 2024-05-15 23:07:11,558 | INFO     | all payload control threads have been joined
[2024-05-15 19:07:26] 2024-05-15 23:07:11,936 | INFO     | [job] retrieve thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:11,941 | INFO     | [job] queue monitor thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:11,945 | INFO     | [job] job monitor thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:11,975 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:12,062 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:12,069 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:12,077 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:12,121 | INFO     | [data] control thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:12,446 | INFO     | [job] control thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:12,563 | INFO     | [payload] control thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:12,568 | INFO     | [job] validate thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:12,609 | INFO     | [data] copytool_in thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:12,977 | INFO     | [data] copytool_out thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:13,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 19:07:26] 2024-05-15 23:07:13,404 | INFO     | [payload] failed_post thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:13,501 | INFO     | [payload] validate_post thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:17,035 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 19:07:26] 2024-05-15 23:07:17,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139894873388864)>', '<ExcThread(monitor, started 139894450018048)>']
[2024-05-15 19:07:26] 2024-05-15 23:07:17,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 19:07:26] 2024-05-15 23:07:17,983 | INFO     | [monitor] control thread has ended
[2024-05-15 19:07:26] 2024-05-15 23:07:22,613 | INFO     | all workflow threads have been joined
[2024-05-15 19:07:26] 2024-05-15 23:07:22,613 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 19:07:26] 2024-05-15 23:07:22,614 | INFO     | traces error code: 0
[2024-05-15 19:07:26] 2024-05-15 23:07:22,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 19:07:26] 2024-05-15 23:07:22,872 [wrapper] ==== pilot stdout END ====
[2024-05-15 19:07:26] 2024-05-15 23:07:22,921 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 19:07:26] 2024-05-15 23:07:22,965 [wrapper] pilotpid: 81870
[2024-05-15 19:07:26] 2024-05-15 23:07:23,002 [wrapper] Pilot exit status: 0
[2024-05-15 19:07:26] 2024-05-15 23:07:23,154 [wrapper] pandaids: 6206733193
[2024-05-15 19:07:26] 2024-05-15 23:07:23,333 [wrapper] cleanup: SIGTERM to supervisor_pilot 97230 81871
[2024-05-15 19:07:26] 2024-05-15 23:07:23,357 [wrapper] Test setup, not cleaning
[2024-05-15 19:07:26] 2024-05-15 23:07:23,388 [wrapper] ==== wrapper stdout END ====
[2024-05-15 19:07:26] 2024-05-15 23:07:23,429 [wrapper] ==== wrapper stderr END ====
[2024-05-15 19:07:26] 2024-05-15 23:07:23,524 [wrapper] apfmon messages muted
[2024-05-15 19:07:26]  *** Error codes and diagnostics ***
[2024-05-15 19:07:26]     "exeErrorCode": 0,
[2024-05-15 19:07:26]     "exeErrorDiag": "",
[2024-05-15 19:07:26]     "pilotErrorCode": 0,
[2024-05-15 19:07:26]     "pilotErrorDiag": "",
[2024-05-15 19:07:26]  *** Listing of results directory ***
[2024-05-15 19:07:26] total 957736
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas    467845 May 15 08:46 pilot3.tar.gz
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas      5633 May 15 08:47 queuedata.json
[2024-05-15 19:07:26] -rwx------ 1 boincer umatlas     32251 May 15 08:48 runpilot2-wrapper.sh
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas       100 May 15 12:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 19:07:26] -rwxr-xr-x 1 boincer umatlas      7986 May 15 12:52 run_atlas
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas       105 May 15 12:52 job.xml
[2024-05-15 19:07:26] -rw-r--r-- 2 boincer umatlas 636355315 May 15 12:52 EVNT.38776170._000004.pool.root.1
[2024-05-15 19:07:26] -rw-r--r-- 2 boincer umatlas     17537 May 15 12:52 start_atlas.sh
[2024-05-15 19:07:26] drwxrwx--x 2 boincer umatlas      4096 May 15 12:52 shared
[2024-05-15 19:07:26] -rw-r--r-- 2 boincer umatlas    479994 May 15 12:52 input.tar.gz
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas         0 May 15 12:52 boinc_lockfile
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas      2614 May 15 12:52 pandaJob.out
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas      2066 May 15 12:52 stderr.txt
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas       467 May 15 12:52 setup.sh.local
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas   1011281 May 15 12:54 agis_schedconf.cvmfs.json
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas   1324701 May 15 12:54 cric_ddmendpoints.json
[2024-05-15 19:07:26] drwx------ 4 boincer umatlas      4096 May 15 12:54 pilot3
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas      6387 May 15 19:02 init_data.xml
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas 335553667 May 15 19:03 HITS.38920987._000232.pool.root.1
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas       531 May 15 19:04 boinc_task_state.xml
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas      1091 May 15 19:05 memory_monitor_summary.json
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas         0 May 15 19:06 agis_ddmendpoints.agis.ALL.json
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas    490926 May 15 19:06 log.38920987._000232.job.log.tgz.1
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas        95 May 15 19:06 pilot_heartbeat.json
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas      7761 May 15 19:07 heartbeat.json
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas      4334 May 15 19:07 pilotlog.txt
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas   2161066 May 15 19:07 log.38920987._000232.job.log.1
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas       357 May 15 19:07 output.list
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas      8192 May 15 19:07 boinc_mmap_file
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas       620 May 15 19:07 runtime_log
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas   2672640 May 15 19:07 result.tar.gz
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas     11400 May 15 19:07 runtime_log.err
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas       652 May 15 19:07 3ZJODmQETR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmLJOKDmq6Rpgm.diag
[2024-05-15 19:07:26] -rw-r--r-- 1 boincer umatlas        28 May 15 19:07 wrapper_checkpoint.txt
[2024-05-15 19:07:26] HITS file was successfully produced:
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas 335553667 May 15 19:03 shared/HITS.pool.root.1
[2024-05-15 19:07:26]  *** Contents of shared directory: ***
[2024-05-15 19:07:26] total 952248
[2024-05-15 19:07:26] -rw-r--r-- 2 boincer umatlas 636355315 May 15 12:52 ATLAS.root_0
[2024-05-15 19:07:26] -rw-r--r-- 2 boincer umatlas     17537 May 15 12:52 start_atlas.sh
[2024-05-15 19:07:26] -rw-r--r-- 2 boincer umatlas    479994 May 15 12:52 input.tar.gz
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas 335553667 May 15 19:03 HITS.pool.root.1
[2024-05-15 19:07:26] -rw------- 1 boincer umatlas   2672640 May 15 19:07 result.tar.gz
19:07:27 (20060): run_atlas exited; CPU time 82964.297427
19:07:27 (20060): called boinc_finish(0)

</stderr_txt>
]]>

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