Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
17:26:52 (23405): wrapper (7.7.26015): starting
17:26:52 (23405): wrapper: running run_atlas (--nthreads 12)
[2024-05-16 17:26:52] Arguments: --nthreads 12
[2024-05-16 17:26:52] Threads: 12
[2024-05-16 17:26:52] Checking for CVMFS
[2024-05-16 17:26:53] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 17:26:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 17:26:53] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 17:26:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 17:26:53] 2.10.1.0 2766 171586 177808 132819 0 241 44098532 45568000 6274 130560 0 580155384 99.770 358678705 12322 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-16 17:26:53] CVMFS is ok
[2024-05-16 17:26:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 17:26:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 17:26:53] Further information can be found at the LHC@home message board.
[2024-05-16 17:26:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 17:26:53] Checking for apptainer binary...
[2024-05-16 17:26:53] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 17:26:53] Running /usr/bin/apptainer --version
[2024-05-16 17:26:53] apptainer version 1.1.8-1.el7
[2024-05-16 17:26:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 17:26:54] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0085.triumf.lcg
[2024-05-16 17:26:54] apptainer works
[2024-05-16 17:26:54] Set ATHENA_PROC_NUMBER=12
[2024-05-16 17:26:54] Set ATHENA_CORE_NUMBER=12
[2024-05-16 17:26:54] Starting ATLAS job with PandaID=6206732535
[2024-05-16 17:26:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 18:20:31]  *** The last 200 lines of the pilot log: ***
[2024-05-16 18:20:31]  domain=
[2024-05-16 18:20:31]  filesize=346150
[2024-05-16 18:20:31]  filetype=log
[2024-05-16 18:20:31]  guid=219746f9-a539-4e25-8b1b-6cef2c6f4e71
[2024-05-16 18:20:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-16 18:20:31]  is_tar=False
[2024-05-16 18:20:31]  lfn=log.38776104._005512.job.log.tgz.1
[2024-05-16 18:20:31]  mtime=0
[2024-05-16 18:20:31]  protocol_id=None
[2024-05-16 18:20:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-16 18:20:31]  replicas=None
[2024-05-16 18:20:31]  scope=mc23_13p6TeV
[2024-05-16 18:20:31]  status=None
[2024-05-16 18:20:31]  status_code=0
[2024-05-16 18:20:31]  storage_token=
[2024-05-16 18:20:31]  surl=/home/boinc/slots/0/PanDA_Pilot-6206732535/log.38776104._005512.job.log.tgz.1
[2024-05-16 18:20:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/b1/log.38776104._005512.job.log.tgz.1
[2024-05-16 18:20:31]  workdir=None
[2024-05-16 18:20:31] ]
[2024-05-16 18:20:31] 2024-05-17 01:20:06,986 | INFO     | transferring file log.38776104._005512.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6206732535/log.38776104._005512.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-16 18:20:31] 2024-05-17 01:20:06,986 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6206732535/log.38776104._005512.job.log.tgz.1 /home/boinc/slots/0/log.38776104._005512.job.log.t
[2024-05-16 18:20:31] 2024-05-17 01:20:07,011 | INFO     | adding to output.list: log.38776104._005512.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/b1/log.38776104._005512.job.log.tg
[2024-05-16 18:20:31] 2024-05-17 01:20:07,012 | INFO     | summary of transferred files:
[2024-05-16 18:20:31] 2024-05-17 01:20:07,012 | INFO     |  -- lfn=log.38776104._005512.job.log.tgz.1, status_code=0, status=transferred
[2024-05-16 18:20:31] 2024-05-17 01:20:07,012 | INFO     | stage-out finished correctly
[2024-05-16 18:20:31] 2024-05-17 01:20:08,278 | INFO     | monitor loop #253: job 0:6206732535 is in state 'finished'
[2024-05-16 18:20:31] 2024-05-17 01:20:08,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 18:20:31] 2024-05-17 01:20:09,977 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-16 18:20:31] 2024-05-17 01:20:10,750 | INFO     | job 6206732535 has state=finished
[2024-05-16 18:20:31] 2024-05-17 01:20:10,751 | INFO     | preparing for final server update for job 6206732535 in state='finished'
[2024-05-16 18:20:31] 2024-05-17 01:20:10,751 | INFO     | this job has now completed (state=finished)
[2024-05-16 18:20:31] 2024-05-17 01:20:10,751 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-16 18:20:31] 2024-05-17 01:20:10,752 | INFO     | job 6206732535 has finished - writing final server update
[2024-05-16 18:20:31] 2024-05-17 01:20:10,752 | INFO     | total number of processed events: 400 (read)
[2024-05-16 18:20:31] 2024-05-17 01:20:10,758 | INFO     | executing command: lscpu
[2024-05-16 18:20:31] 2024-05-17 01:20:10,785 | INFO     | monitor loop #254: job 0:6206732535 is in state 'finished'
[2024-05-16 18:20:31] 2024-05-17 01:20:10,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 18:20:31] 2024-05-17 01:20:10,825 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-16 18:20:31] 2024-05-17 01:20:10,825 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-16 18:20:31] 2024-05-17 01:20:10,880 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-16 18:20:31] 2024-05-17 01:20:13,289 | INFO     | monitor loop #255: job 0:6206732535 is in state 'finished'
[2024-05-16 18:20:31] 2024-05-17 01:20:13,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 18:20:31] 2024-05-17 01:20:14,795 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-16 18:20:31] 2024-05-17 01:20:14,795 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6206732535/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 18:20:31] 2024-05-17 01:20:14,797 | INFO     | extracted standard info from prmon json
[2024-05-16 18:20:31] 2024-05-17 01:20:14,797 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 18:20:31] 2024-05-17 01:20:14,797 | WARNING  | GPU info not found in prmon json
[2024-05-16 18:20:31] 2024-05-17 01:20:14,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 18:20:31] 2024-05-17 01:20:14,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 18:20:31] 2024-05-17 01:20:14,800 | INFO     | fitting pss+swap vs Time
[2024-05-16 18:20:31] 2024-05-17 01:20:14,800 | INFO     | model: linear, x: [1715905952.0, 1715906013.0, 1715906074.0, 1715906135.0, 1715906196.0, 1715906257.0, 1715906318.0, 1715906379.0, 1715906440.0, 1715906501.0, 1715
[2024-05-16 18:20:31] 2024-05-17 01:20:14,800 | INFO     | sum of square deviations: 28242390.0
[2024-05-16 18:20:31] 2024-05-17 01:20:14,801 | INFO     | sum of deviations: 16070097176.0
[2024-05-16 18:20:31] 2024-05-17 01:20:14,801 | INFO     | mean x: 1715907294.0
[2024-05-16 18:20:31] 2024-05-17 01:20:14,801 | INFO     | mean y: 2692232.888888889
[2024-05-16 18:20:31] 2024-05-17 01:20:14,801 | INFO     | -- intersect: -976359328105.5881
[2024-05-16 18:20:31] 2024-05-17 01:20:14,801 | INFO     | intersect: -976359328105.5881
[2024-05-16 18:20:31] 2024-05-17 01:20:14,802 | INFO     | chi2: 1.800288137406314
[2024-05-16 18:20:31] 2024-05-17 01:20:14,802 | INFO     | -- intersect: -976359328105.5881
[2024-05-16 18:20:31] 2024-05-17 01:20:14,802 | INFO     | current memory leak: 569.01 B/s (using 45 data points, chi2=1.80)
[2024-05-16 18:20:31] 2024-05-17 01:20:14,803 | INFO     | ..............................
[2024-05-16 18:20:31] 2024-05-17 01:20:14,803 | INFO     | . Timing measurements:
[2024-05-16 18:20:31] 2024-05-17 01:20:14,803 | INFO     | . get job = 0 s
[2024-05-16 18:20:31] 2024-05-17 01:20:14,803 | INFO     | . initial setup = 2 s
[2024-05-16 18:20:31] 2024-05-17 01:20:14,803 | INFO     | . payload setup = 5 s
[2024-05-16 18:20:31] 2024-05-17 01:20:14,803 | INFO     | . stage-in = 0 s
[2024-05-16 18:20:31] 2024-05-17 01:20:14,803 | INFO     | . payload execution = 3157 s
[2024-05-16 18:20:31] 2024-05-17 01:20:14,803 | INFO     | . stage-out = 0 s
[2024-05-16 18:20:31] 2024-05-17 01:20:14,803 | INFO     | . log creation = 0 s
[2024-05-16 18:20:31] 2024-05-17 01:20:14,804 | INFO     | ..............................
[2024-05-16 18:20:31] 2024-05-17 01:20:14,898 | INFO     | 
[2024-05-16 18:20:31] 2024-05-17 01:20:14,898 | INFO     | job summary report
[2024-05-16 18:20:31] 2024-05-17 01:20:14,899 | INFO     | --------------------------------------------------
[2024-05-16 18:20:31] 2024-05-17 01:20:14,899 | INFO     | PanDA job id: 6206732535
[2024-05-16 18:20:31] 2024-05-17 01:20:14,899 | INFO     | task id: 38776104
[2024-05-16 18:20:31] 2024-05-17 01:20:14,899 | INFO     | errors: (none)
[2024-05-16 18:20:31] 2024-05-17 01:20:14,899 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 18:20:31] 2024-05-17 01:20:14,899 | INFO     | pilot state: finished 
[2024-05-16 18:20:31] 2024-05-17 01:20:14,899 | INFO     | transexitcode: 0
[2024-05-16 18:20:31] 2024-05-17 01:20:14,899 | INFO     | exeerrorcode: 0
[2024-05-16 18:20:31] 2024-05-17 01:20:14,899 | INFO     | exeerrordiag: 
[2024-05-16 18:20:31] 2024-05-17 01:20:14,900 | INFO     | exitcode: 0
[2024-05-16 18:20:31] 2024-05-17 01:20:14,900 | INFO     | exitmsg: OK
[2024-05-16 18:20:31] 2024-05-17 01:20:14,900 | INFO     | cpuconsumptiontime: 26779 s
[2024-05-16 18:20:31] 2024-05-17 01:20:14,900 | INFO     | nevents: 400
[2024-05-16 18:20:31] 2024-05-17 01:20:14,900 | INFO     | neventsw: 0
[2024-05-16 18:20:31] 2024-05-17 01:20:14,900 | INFO     | pid: 33999
[2024-05-16 18:20:31] 2024-05-17 01:20:14,900 | INFO     | pgrp: 33999
[2024-05-16 18:20:31] 2024-05-17 01:20:14,900 | INFO     | corecount: 12
[2024-05-16 18:20:31] 2024-05-17 01:20:14,900 | INFO     | event service: False
[2024-05-16 18:20:31] 2024-05-17 01:20:14,901 | INFO     | sizes: {0: 2392028, 1: 2392227, 4: 2392433, 11: 2392461, 3166: 2418014, 3168: 2426968, 3171: 2427152, 3176: 2427322}
[2024-05-16 18:20:31] 2024-05-17 01:20:14,901 | INFO     | --------------------------------------------------
[2024-05-16 18:20:31] 2024-05-17 01:20:14,901 | INFO     | 
[2024-05-16 18:20:31] 2024-05-17 01:20:14,901 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-16 18:20:31] 2024-05-17 01:20:14,934 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,934 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,934 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,934 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,936 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 18:20:31] 2024-05-17 01:20:14,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,936 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 18:20:31] 2024-05-17 01:20:14,937 | INFO     | job 6206732535 has completed (purged errors)
[2024-05-16 18:20:31] 2024-05-17 01:20:14,937 | INFO     | overall cleanup function is called
[2024-05-16 18:20:31] 2024-05-17 01:20:15,946 | INFO     | --- collectZombieJob: --- 10, [33999]
[2024-05-16 18:20:31] 2024-05-17 01:20:15,947 | INFO     | zombie collector waiting for pid 33999
[2024-05-16 18:20:31] 2024-05-17 01:20:15,947 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 18:20:31] 2024-05-17 01:20:16,952 | INFO     | collected zombie processes
[2024-05-16 18:20:31] 2024-05-17 01:20:16,952 | INFO     | will now attempt to kill all subprocesses of pid=33999
[2024-05-16 18:20:31] 2024-05-17 01:20:17,081 | INFO     | process IDs to be killed: [33999] (in reverse order)
[2024-05-16 18:20:31] 2024-05-17 01:20:17,172 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 18:20:31] 2024-05-17 01:20:17,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 18:20:31] 2024-05-17 01:20:17,180 | INFO     | did not find any defunct processes belonging to 33999
[2024-05-16 18:20:31] 2024-05-17 01:20:17,187 | INFO     | did not find any defunct processes belonging to 33999
[2024-05-16 18:20:31] 2024-05-17 01:20:17,187 | INFO     | ready for new job
[2024-05-16 18:20:31] 2024-05-17 01:20:17,187 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 18:20:31] 2024-05-17 01:20:17,189 | INFO     | *************************************
[2024-05-16 18:20:31] 2024-05-17 01:20:17,189 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 18:20:31] 2024-05-17 01:20:17,189 | INFO     | *************************************
[2024-05-16 18:20:31] 2024-05-17 01:20:17,189 | INFO     | 
[2024-05-16 18:20:31] 2024-05-17 01:20:17,194 | INFO     | architecture information:
[2024-05-16 18:20:31] 2024-05-17 01:20:17,194 | INFO     | executing command: cat /etc/os-release
[2024-05-16 18:20:31] 2024-05-17 01:20:17,216 | INFO     | cat /etc/os-release:
[2024-05-16 18:20:31] NAME="CentOS Linux"
[2024-05-16 18:20:31] VERSION="7 (Core)"
[2024-05-16 18:20:31] ID="centos"
[2024-05-16 18:20:31] ID_LIKE="rhel fedora"
[2024-05-16 18:20:31] VERSION_ID="7"
[2024-05-16 18:20:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 18:20:31] ANSI_COLOR="0;31"
[2024-05-16 18:20:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 18:20:31] HOME_URL="https://www.centos.org/"
[2024-05-16 18:20:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 18:20:31] 
[2024-05-16 18:20:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 18:20:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 18:20:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 18:20:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 18:20:31] 
[2024-05-16 18:20:31] 2024-05-17 01:20:17,217 | INFO     | *************************************
[2024-05-16 18:20:31] 2024-05-17 01:20:17,720 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-16 18:20:31] 2024-05-17 01:20:17,746 | INFO     | sufficient remaining disk space (2232897503232 B)
[2024-05-16 18:20:31] 2024-05-17 01:20:17,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 18:20:31] 2024-05-17 01:20:17,746 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 18:20:31] 2024-05-17 01:20:17,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 18:20:31] 2024-05-17 01:20:17,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 18:20:31] 2024-05-17 01:20:17,748 | INFO     | aborting loop
[2024-05-16 18:20:31] 2024-05-17 01:20:18,027 | INFO     | all data control threads have been joined
[2024-05-16 18:20:31] 2024-05-17 01:20:18,361 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 18:20:31] 2024-05-17 01:20:18,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 18:20:31] 2024-05-17 01:20:18,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 18:20:31] 2024-05-17 01:20:18,601 | INFO     | all job control threads have been joined
[2024-05-16 18:20:31] 2024-05-17 01:20:18,752 | INFO     | [job] retrieve thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:18,753 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:18,755 | INFO     | [job] job monitor thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:18,855 | INFO     | all payload control threads have been joined
[2024-05-16 18:20:31] 2024-05-17 01:20:18,909 | INFO     | [payload] validate_post thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:19,027 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:19,031 | INFO     | [data] control thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:19,069 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:19,274 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:19,581 | INFO     | [data] copytool_in thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:19,607 | INFO     | [job] control thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:19,749 | INFO     | [data] copytool_out thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:19,861 | INFO     | [payload] control thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:19,914 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 18:20:31] 2024-05-17 01:20:20,022 | INFO     | [job] validate thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:20,095 | INFO     | [payload] failed_post thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:20,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 18:20:31] 2024-05-17 01:20:20,921 | INFO     | [job] queue monitor thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:24,587 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 18:20:31] 2024-05-17 01:20:25,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057312126784)>', '<ExcThread(monitor, started 140057029617408)>']
[2024-05-16 18:20:31] 2024-05-17 01:20:26,404 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 18:20:31] 2024-05-17 01:20:26,404 | INFO     | [monitor] control thread has ended
[2024-05-16 18:20:31] 2024-05-17 01:20:30,520 | INFO     | all workflow threads have been joined
[2024-05-16 18:20:31] 2024-05-17 01:20:30,520 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 18:20:31] 2024-05-17 01:20:30,520 | INFO     | traces error code: 0
[2024-05-16 18:20:31] 2024-05-17 01:20:30,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 18:20:31] 2024-05-17 01:20:30,650 [wrapper] ==== pilot stdout END ====
[2024-05-16 18:20:31] 2024-05-17 01:20:30,654 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 18:20:31] 2024-05-17 01:20:30,657 [wrapper] pilotpid: 27583
[2024-05-16 18:20:31] 2024-05-17 01:20:30,661 [wrapper] Pilot exit status: 0
[2024-05-16 18:20:31] 2024-05-17 01:20:30,674 [wrapper] pandaids: 6206732535
[2024-05-16 18:20:31] 2024-05-17 01:20:30,722 [wrapper] cleanup: SIGTERM to supervisor_pilot  87837 27584
[2024-05-16 18:20:31] 2024-05-17 01:20:30,727 [wrapper] Test setup, not cleaning
[2024-05-16 18:20:31] 2024-05-17 01:20:30,731 [wrapper] ==== wrapper stdout END ====
[2024-05-16 18:20:31] 2024-05-17 01:20:30,734 [wrapper] ==== wrapper stderr END ====
[2024-05-16 18:20:31] 2024-05-17 01:20:30,742 [wrapper] apfmon messages muted
[2024-05-16 18:20:31]  *** Error codes and diagnostics ***
[2024-05-16 18:20:31]     "exeErrorCode": 0,
[2024-05-16 18:20:31]     "exeErrorDiag": "",
[2024-05-16 18:20:31]     "pilotErrorCode": 0,
[2024-05-16 18:20:31]     "pilotErrorDiag": "",
[2024-05-16 18:20:31]  *** Listing of results directory ***
[2024-05-16 18:20:31] total 819760
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc    467845 May 15 05:25 pilot3.tar.gz
[2024-05-16 18:20:31] -rwx------ 1 boinc boinc     32251 May 15 05:31 runpilot2-wrapper.sh
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc      5633 May 15 05:31 queuedata.json
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc       100 May 16 17:26 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 18:20:31] -rwxr-xr-x 1 boinc boinc      7986 May 16 17:26 run_atlas
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc       105 May 16 17:26 job.xml
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc      6628 May 16 17:26 init_data.xml
[2024-05-16 18:20:31] -rw-r--r-- 2 boinc boinc 602266478 May 16 17:26 EVNT.38776100._000249.pool.root.1
[2024-05-16 18:20:31] drwxrwx--x 2 boinc boinc      4096 May 16 17:26 shared
[2024-05-16 18:20:31] -rw-r--r-- 2 boinc boinc    480008 May 16 17:26 input.tar.gz
[2024-05-16 18:20:31] -rw-r--r-- 2 boinc boinc     17537 May 16 17:26 start_atlas.sh
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc         0 May 16 17:26 boinc_lockfile
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc      2641 May 16 17:26 pandaJob.out
[2024-05-16 18:20:31] -rw------- 1 boinc boinc       424 May 16 17:26 setup.sh.local
[2024-05-16 18:20:31] -rw------- 1 boinc boinc   1019310 May 16 17:27 agis_schedconf.cvmfs.json
[2024-05-16 18:20:31] -rw------- 1 boinc boinc         0 May 16 17:27 agis_ddmendpoints.agis.ALL.json
[2024-05-16 18:20:31] -rw------- 1 boinc boinc   1324701 May 16 17:27 cric_ddmendpoints.json
[2024-05-16 18:20:31] drwx------ 4 boinc boinc      4096 May 16 17:27 pilot3
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc       530 May 16 18:19 boinc_task_state.xml
[2024-05-16 18:20:31] -rw------- 1 boinc boinc 232276875 May 16 18:19 HITS.38776104._005512.pool.root.1
[2024-05-16 18:20:31] -rw------- 1 boinc boinc      1061 May 16 18:20 memory_monitor_summary.json
[2024-05-16 18:20:31] -rw------- 1 boinc boinc    346150 May 16 18:20 log.38776104._005512.job.log.tgz.1
[2024-05-16 18:20:31] -rw------- 1 boinc boinc        95 May 16 18:20 pilot_heartbeat.json
[2024-05-16 18:20:31] -rw------- 1 boinc boinc      7764 May 16 18:20 heartbeat.json
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc      8192 May 16 18:20 boinc_mmap_file
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc        27 May 16 18:20 wrapper_checkpoint.txt
[2024-05-16 18:20:31] -rw------- 1 boinc boinc      4210 May 16 18:20 pilotlog.txt
[2024-05-16 18:20:31] -rw------- 1 boinc boinc    334069 May 16 18:20 log.38776104._005512.job.log.1
[2024-05-16 18:20:31] -rw------- 1 boinc boinc       357 May 16 18:20 output.list
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc       620 May 16 18:20 runtime_log
[2024-05-16 18:20:31] -rw------- 1 boinc boinc    696320 May 16 18:20 result.tar.gz
[2024-05-16 18:20:31] -rw------- 1 boinc boinc       651 May 16 18:20 yodNDm8xSR5n7Olcko1bjSoqABFKDmABFKDmOtvXDmjkYKDmGsGJhm.diag
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc     11286 May 16 18:20 runtime_log.err
[2024-05-16 18:20:31] -rw-r--r-- 1 boinc boinc     21541 May 16 18:20 stderr.txt
[2024-05-16 18:20:31] HITS file was successfully produced:
[2024-05-16 18:20:31] -rw------- 1 boinc boinc 232276875 May 16 18:19 shared/HITS.pool.root.1
[2024-05-16 18:20:31]  *** Contents of shared directory: ***
[2024-05-16 18:20:31] total 816168
[2024-05-16 18:20:31] -rw-r--r-- 2 boinc boinc 602266478 May 16 17:26 ATLAS.root_0
[2024-05-16 18:20:31] -rw-r--r-- 2 boinc boinc    480008 May 16 17:26 input.tar.gz
[2024-05-16 18:20:31] -rw-r--r-- 2 boinc boinc     17537 May 16 17:26 start_atlas.sh
[2024-05-16 18:20:31] -rw------- 1 boinc boinc 232276875 May 16 18:19 HITS.pool.root.1
[2024-05-16 18:20:31] -rw------- 1 boinc boinc    696320 May 16 18:20 result.tar.gz
18:20:32 (23405): run_atlas exited; CPU time 26682.108191
18:20:32 (23405): called boinc_finish(0)

</stderr_txt>
]]>

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