Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:07:00 (25663): wrapper (7.7.26015): starting
11:07:00 (25663): wrapper: running run_atlas (--nthreads 8)
[2024-05-15 11:07:00] Arguments: --nthreads 8
[2024-05-15 11:07:00] Threads: 8
[2024-05-15 11:07:00] Checking for CVMFS
[2024-05-15 11:07:01] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 11:07:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 11:07:01] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 11:07:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 11:07:03] 2.11.2.0 26827 8047 116992 132763 3 315 12513256 18432000 31987 130560 0 95236909 99.283 138961445 52604 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-05-15 11:07:03] CVMFS is ok
[2024-05-15 11:07:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 11:07:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 11:07:03] Further information can be found at the LHC@home message board.
[2024-05-15 11:07:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 11:07:03] Checking for apptainer binary...
[2024-05-15 11:07:03] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 11:07:03] Running /usr/bin/apptainer --version
[2024-05-15 11:07:04] apptainer version 1.3.0-1.el7
[2024-05-15 11:07:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 11:07:28] c-212-8.aglt2.org
[2024-05-15 11:07:28] apptainer works
[2024-05-15 11:07:28] Set ATHENA_PROC_NUMBER=8
[2024-05-15 11:07:28] Set ATHENA_CORE_NUMBER=8
[2024-05-15 11:07:28] Starting ATLAS job with PandaID=6206688077
[2024-05-15 11:07:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 14:04:04]  *** The last 200 lines of the pilot log: ***
[2024-05-15 14:04:04] 2024-05-15 18:03:40,523 | INFO     | chi2: 8.883441983722712
[2024-05-15 14:04:04] 2024-05-15 18:03:40,523 | INFO     | model: linear, x: [1715786080.0, 1715786141.0, 1715786202.0, 1715786263.0, 1715786324.0, 1715786385.0, 1715786446.0, 1715786507.0, 1715786568.0, 1715786629.0, 1715
[2024-05-15 14:04:04] 2024-05-15 18:03:40,523 | INFO     | sum of square deviations: 1294019598.9441035
[2024-05-15 14:04:04] 2024-05-15 18:03:40,524 | INFO     | sum of deviations: 127239910295.0062
[2024-05-15 14:04:04] 2024-05-15 18:03:40,524 | INFO     | mean x: 1715790960.0186336
[2024-05-15 14:04:04] 2024-05-15 18:03:40,524 | INFO     | mean y: 2369406.664596273
[2024-05-15 14:04:04] 2024-05-15 18:03:40,524 | INFO     | -- intersect: -168709980866.7751
[2024-05-15 14:04:04] 2024-05-15 18:03:40,524 | INFO     | intersect: -168709980866.7751
[2024-05-15 14:04:04] 2024-05-15 18:03:40,524 | INFO     | chi2: 8.121800972626863
[2024-05-15 14:04:04] 2024-05-15 18:03:40,524 | INFO     | current chi2=8.121800972626863 (change=8.573715148828766 %)
[2024-05-15 14:04:04] 2024-05-15 18:03:40,524 | INFO     | right removable region: 160
[2024-05-15 14:04:04] 2024-05-15 18:03:40,524 | INFO     | model: linear, x: [1715786385.0, 1715786446.0, 1715786507.0, 1715786568.0, 1715786629.0, 1715786690.0, 1715786751.0, 1715786812.0, 1715786873.0, 1715786934.0, 1715
[2024-05-15 14:04:04] 2024-05-15 18:03:40,525 | INFO     | sum of square deviations: 1294017768.9441035
[2024-05-15 14:04:04] 2024-05-15 18:03:40,525 | INFO     | sum of deviations: 69804150053.1242
[2024-05-15 14:04:04] 2024-05-15 18:03:40,525 | INFO     | mean x: 1715791265.0186336
[2024-05-15 14:04:04] 2024-05-15 18:03:40,526 | INFO     | mean y: 2423331.2919254657
[2024-05-15 14:04:04] 2024-05-15 18:03:40,526 | INFO     | -- intersect: -92553763915.60365
[2024-05-15 14:04:04] 2024-05-15 18:03:40,526 | INFO     | intersect: -92553763915.60365
[2024-05-15 14:04:04] 2024-05-15 18:03:40,526 | INFO     | chi2: 4.738215933790669
[2024-05-15 14:04:04] 2024-05-15 18:03:40,526 | INFO     | current chi2=4.738215933790669 (change=46.6623866911881 %)
[2024-05-15 14:04:04] 2024-05-15 18:03:40,526 | INFO     | model: linear, x: [1715786690.0, 1715786751.0, 1715786812.0, 1715786873.0, 1715786934.0, 1715786995.0, 1715787056.0, 1715787117.0, 1715787178.0, 1715787239.0, 1715
[2024-05-15 14:04:04] 2024-05-15 18:03:40,526 | INFO     | sum of square deviations: 1177158848.942304
[2024-05-15 14:04:04] 2024-05-15 18:03:40,527 | INFO     | sum of deviations: 34125678096.846184
[2024-05-15 14:04:04] 2024-05-15 18:03:40,527 | INFO     | mean x: 1715791417.5192308
[2024-05-15 14:04:04] 2024-05-15 18:03:40,527 | INFO     | mean y: 2469892.3846153845
[2024-05-15 14:04:04] 2024-05-15 18:03:40,527 | INFO     | -- intersect: -49738094559.22112
[2024-05-15 14:04:04] 2024-05-15 18:03:40,527 | INFO     | intersect: -49738094559.22112
[2024-05-15 14:04:04] 2024-05-15 18:03:40,528 | INFO     | chi2: 2.866880151868907
[2024-05-15 14:04:04] 2024-05-15 18:03:40,528 | INFO     | current chi2=2.866880151868907 (change=39.49452300340089 %)
[2024-05-15 14:04:04] 2024-05-15 18:03:40,528 | INFO     | model: linear, x: [1715786995.0, 1715787056.0, 1715787117.0, 1715787178.0, 1715787239.0, 1715787300.0, 1715787361.0, 1715787422.0, 1715787483.0, 1715787544.0, 1715
[2024-05-15 14:04:04] 2024-05-15 18:03:40,528 | INFO     | sum of square deviations: 1067555878.9403945
[2024-05-15 14:04:04] 2024-05-15 18:03:40,529 | INFO     | sum of deviations: -528137511.36423683
[2024-05-15 14:04:04] 2024-05-15 18:03:40,529 | INFO     | mean x: 1715791570.0198677
[2024-05-15 14:04:04] 2024-05-15 18:03:40,529 | INFO     | mean y: 2518119.7880794704
[2024-05-15 14:04:04] 2024-05-15 18:03:40,529 | INFO     | -- intersect: 851348525.4708761
[2024-05-15 14:04:04] 2024-05-15 18:03:40,529 | INFO     | intersect: 851348525.4708761
[2024-05-15 14:04:04] 2024-05-15 18:03:40,529 | INFO     | chi2: 1.0796146686219383
[2024-05-15 14:04:04] 2024-05-15 18:03:40,529 | INFO     | current chi2=1.0796146686219383 (change=62.3418276512835 %)
[2024-05-15 14:04:04] 2024-05-15 18:03:40,530 | INFO     | model: linear, x: [1715787300.0, 1715787361.0, 1715787422.0, 1715787483.0, 1715787544.0, 1715787605.0, 1715787666.0, 1715787727.0, 1715787788.0, 1715787849.0, 1715
[2024-05-15 14:04:04] 2024-05-15 18:03:40,530 | INFO     | sum of square deviations: 964976296.4383593
[2024-05-15 14:04:04] 2024-05-15 18:03:40,530 | INFO     | sum of deviations: -12997583901.0411
[2024-05-15 14:04:04] 2024-05-15 18:03:40,530 | INFO     | mean x: 1715791722.5205479
[2024-05-15 14:04:04] 2024-05-15 18:03:40,530 | INFO     | mean y: 2536550.51369863
[2024-05-15 14:04:04] 2024-05-15 18:03:40,531 | INFO     | -- intersect: 23113100978.349052
[2024-05-15 14:04:04] 2024-05-15 18:03:40,531 | INFO     | intersect: 23113100978.349052
[2024-05-15 14:04:04] 2024-05-15 18:03:40,531 | INFO     | chi2: 0.8137345581394154
[2024-05-15 14:04:04] 2024-05-15 18:03:40,531 | INFO     | current chi2=0.8137345581394154 (change=24.627315486728474 %)
[2024-05-15 14:04:04] 2024-05-15 18:03:40,531 | INFO     | left removable region: 40
[2024-05-15 14:04:04] 2024-05-15 18:03:40,531 | INFO     | model: linear, x: [1715788520.0, 1715788581.0, 1715788643.0, 1715788703.0, 1715788764.0, 1715788825.0, 1715788886.0, 1715788947.0, 1715789008.0, 1715789069.0, 1715
[2024-05-15 14:04:04] 2024-05-15 18:03:40,531 | INFO     | sum of square deviations: 535784291.92500097
[2024-05-15 14:04:04] 2024-05-15 18:03:40,532 | INFO     | sum of deviations: -3016811037.5999994
[2024-05-15 14:04:04] 2024-05-15 18:03:40,532 | INFO     | mean x: 1715792149.525
[2024-05-15 14:04:04] 2024-05-15 18:03:40,532 | INFO     | mean y: 2551296.8666666667
[2024-05-15 14:04:04] 2024-05-15 18:03:40,532 | INFO     | -- intersect: 9663567442.593866
[2024-05-15 14:04:04] 2024-05-15 18:03:40,532 | INFO     | intersect: 9663567442.593866
[2024-05-15 14:04:04] 2024-05-15 18:03:40,532 | INFO     | chi2: 0.003314634449814957
[2024-05-15 14:04:04] 2024-05-15 18:03:40,532 | INFO     | -- intersect: 9663567442.593866
[2024-05-15 14:04:04] 2024-05-15 18:03:40,533 | INFO     | current memory leak: -5.63 B/s (using 120 data points, chi2=0.00)
[2024-05-15 14:04:04] 2024-05-15 18:03:40,533 | INFO     | ..............................
[2024-05-15 14:04:04] 2024-05-15 18:03:40,533 | INFO     | . Timing measurements:
[2024-05-15 14:04:04] 2024-05-15 18:03:40,533 | INFO     | . get job = 0 s
[2024-05-15 14:04:04] 2024-05-15 18:03:40,533 | INFO     | . initial setup = 4 s
[2024-05-15 14:04:04] 2024-05-15 18:03:40,533 | INFO     | . payload setup = 78 s
[2024-05-15 14:04:04] 2024-05-15 18:03:40,533 | INFO     | . stage-in = 0 s
[2024-05-15 14:04:04] 2024-05-15 18:03:40,533 | INFO     | . payload execution = 10165 s
[2024-05-15 14:04:04] 2024-05-15 18:03:40,534 | INFO     | . stage-out = 2 s
[2024-05-15 14:04:04] 2024-05-15 18:03:40,534 | INFO     | . log creation = 0 s
[2024-05-15 14:04:04] 2024-05-15 18:03:40,534 | INFO     | ..............................
[2024-05-15 14:04:04] 2024-05-15 18:03:40,901 | INFO     | 
[2024-05-15 14:04:04] 2024-05-15 18:03:40,901 | INFO     | job summary report
[2024-05-15 14:04:04] 2024-05-15 18:03:40,901 | INFO     | --------------------------------------------------
[2024-05-15 14:04:04] 2024-05-15 18:03:40,901 | INFO     | PanDA job id: 6206688077
[2024-05-15 14:04:04] 2024-05-15 18:03:40,901 | INFO     | task id: 38776104
[2024-05-15 14:04:04] 2024-05-15 18:03:40,901 | INFO     | errors: (none)
[2024-05-15 14:04:04] 2024-05-15 18:03:40,901 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 14:04:04] 2024-05-15 18:03:40,901 | INFO     | pilot state: finished 
[2024-05-15 14:04:04] 2024-05-15 18:03:40,901 | INFO     | transexitcode: 0
[2024-05-15 14:04:04] 2024-05-15 18:03:40,901 | INFO     | exeerrorcode: 0
[2024-05-15 14:04:04] 2024-05-15 18:03:40,903 | INFO     | exeerrordiag: 
[2024-05-15 14:04:04] 2024-05-15 18:03:40,903 | INFO     | exitcode: 0
[2024-05-15 14:04:04] 2024-05-15 18:03:40,903 | INFO     | exitmsg: OK
[2024-05-15 14:04:04] 2024-05-15 18:03:40,903 | INFO     | cpuconsumptiontime: 36245 s
[2024-05-15 14:04:04] 2024-05-15 18:03:40,903 | INFO     | nevents: 400
[2024-05-15 14:04:04] 2024-05-15 18:03:40,903 | INFO     | neventsw: 0
[2024-05-15 14:04:04] 2024-05-15 18:03:40,903 | INFO     | pid: 65072
[2024-05-15 14:04:04] 2024-05-15 18:03:40,903 | INFO     | pgrp: 65072
[2024-05-15 14:04:04] 2024-05-15 18:03:40,903 | INFO     | corecount: 8
[2024-05-15 14:04:04] 2024-05-15 18:03:40,903 | INFO     | event service: False
[2024-05-15 14:04:04] 2024-05-15 18:03:40,904 | INFO     | sizes: {0: 2395142, 1: 2395743, 2: 2396706, 3: 2396706, 14: 2396734, 24: 2396762, 35: 2396918, 46: 2396946, 57: 2396974, 61: 2397208, 68: 2397236, 10248: 2425899, 
[2024-05-15 14:04:04] 2024-05-15 18:03:40,904 | INFO     | --------------------------------------------------
[2024-05-15 14:04:04] 2024-05-15 18:03:40,904 | INFO     | 
[2024-05-15 14:04:04] 2024-05-15 18:03:40,904 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2024-05-15 14:04:04] 2024-05-15 18:03:41,350 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,350 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,350 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,350 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,361 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,361 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,361 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,361 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,361 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,361 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,361 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,361 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,369 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 14:04:04] 2024-05-15 18:03:41,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,369 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 14:04:04] 2024-05-15 18:03:41,369 | INFO     | job 6206688077 has completed (purged errors)
[2024-05-15 14:04:04] 2024-05-15 18:03:41,429 | INFO     | overall cleanup function is called
[2024-05-15 14:04:04] 2024-05-15 18:03:42,449 | INFO     | --- collectZombieJob: --- 10, [65072]
[2024-05-15 14:04:04] 2024-05-15 18:03:42,449 | INFO     | zombie collector waiting for pid 65072
[2024-05-15 14:04:04] 2024-05-15 18:03:42,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 14:04:04] 2024-05-15 18:03:43,465 | INFO     | collected zombie processes
[2024-05-15 14:04:04] 2024-05-15 18:03:43,465 | INFO     | will now attempt to kill all subprocesses of pid=65072
[2024-05-15 14:04:04] 2024-05-15 18:03:43,948 | INFO     | process IDs to be killed: [65072] (in reverse order)
[2024-05-15 14:04:04] 2024-05-15 18:03:44,783 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 14:04:04] 2024-05-15 18:03:44,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 14:04:04] 2024-05-15 18:03:44,800 | INFO     | did not find any defunct processes belonging to 65072
[2024-05-15 14:04:04] 2024-05-15 18:03:44,815 | INFO     | did not find any defunct processes belonging to 65072
[2024-05-15 14:04:04] 2024-05-15 18:03:44,816 | INFO     | ready for new job
[2024-05-15 14:04:04] 2024-05-15 18:03:44,816 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 14:04:04] 2024-05-15 18:03:44,817 | INFO     | *************************************
[2024-05-15 14:04:04] 2024-05-15 18:03:44,818 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 14:04:04] 2024-05-15 18:03:44,818 | INFO     | *************************************
[2024-05-15 14:04:04] 2024-05-15 18:03:44,818 | INFO     | 
[2024-05-15 14:04:04] 2024-05-15 18:03:44,822 | INFO     | architecture information:
[2024-05-15 14:04:04] 2024-05-15 18:03:44,827 | INFO     | executing command: cat /etc/os-release
[2024-05-15 14:04:04] 2024-05-15 18:03:44,913 | INFO     | cat /etc/os-release:
[2024-05-15 14:04:04] NAME="CentOS Linux"
[2024-05-15 14:04:04] VERSION="7 (Core)"
[2024-05-15 14:04:04] ID="centos"
[2024-05-15 14:04:04] ID_LIKE="rhel fedora"
[2024-05-15 14:04:04] VERSION_ID="7"
[2024-05-15 14:04:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 14:04:04] ANSI_COLOR="0;31"
[2024-05-15 14:04:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 14:04:04] HOME_URL="https://www.centos.org/"
[2024-05-15 14:04:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 14:04:04] 
[2024-05-15 14:04:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 14:04:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 14:04:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 14:04:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 14:04:04] 
[2024-05-15 14:04:04] 2024-05-15 18:03:44,913 | INFO     | *************************************
[2024-05-15 14:04:04] 2024-05-15 18:03:45,416 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2024-05-15 14:04:04] 2024-05-15 18:03:45,532 | INFO     | sufficient remaining disk space (98741256192 B)
[2024-05-15 14:04:04] 2024-05-15 18:03:45,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 14:04:04] 2024-05-15 18:03:45,532 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 14:04:04] 2024-05-15 18:03:45,534 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 14:04:04] 2024-05-15 18:03:45,534 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 14:04:04] 2024-05-15 18:03:45,534 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 14:04:04] 2024-05-15 18:03:45,534 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 14:04:04] 2024-05-15 18:03:45,557 | INFO     | all data control threads have been joined
[2024-05-15 14:04:04] 2024-05-15 18:03:45,773 | INFO     | all payload control threads have been joined
[2024-05-15 14:04:04] 2024-05-15 18:03:45,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 14:04:04] 2024-05-15 18:03:46,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 14:04:04] 2024-05-15 18:03:46,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 14:04:04] 2024-05-15 18:03:46,476 | INFO     | aborting loop
[2024-05-15 14:04:04] 2024-05-15 18:03:46,538 | INFO     | [job] retrieve thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:46,562 | INFO     | [data] control thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:46,659 | INFO     | [payload] failed_post thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:46,731 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:46,764 | INFO     | [job] validate thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:46,764 | INFO     | [data] copytool_in thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:46,779 | INFO     | [payload] control thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:46,925 | INFO     | [job] queue monitor thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:47,151 | INFO     | all job control threads have been joined
[2024-05-15 14:04:04] 2024-05-15 18:03:47,254 | INFO     | [payload] validate_post thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:47,291 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 14:04:04] 2024-05-15 18:03:47,482 | INFO     | [job] job monitor thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:47,509 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:47,628 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:48,164 | INFO     | [job] control thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:48,316 | INFO     | [data] copytool_out thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:51,300 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:56,516 | INFO     | job.realtimelogging is not enabled
[2024-05-15 14:04:04] 2024-05-15 18:03:57,522 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 14:04:04] 2024-05-15 18:03:58,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789429147456)>', '<ExcThread(monitor, started 139789005207296)>']
[2024-05-15 14:04:04] 2024-05-15 18:03:58,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 14:04:04] 2024-05-15 18:03:58,610 | INFO     | [monitor] control thread has ended
[2024-05-15 14:04:04] 2024-05-15 18:04:03,261 | INFO     | all workflow threads have been joined
[2024-05-15 14:04:04] 2024-05-15 18:04:03,261 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 14:04:04] 2024-05-15 18:04:03,261 | INFO     | traces error code: 0
[2024-05-15 14:04:04] 2024-05-15 18:04:03,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 14:04:04] 2024-05-15 18:04:04,033 [wrapper] ==== pilot stdout END ====
[2024-05-15 14:04:04] 2024-05-15 18:04:04,045 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 14:04:04] 2024-05-15 18:04:04,053 [wrapper] pilotpid: 68953
[2024-05-15 14:04:04] 2024-05-15 18:04:04,117 [wrapper] Pilot exit status: 0
[2024-05-15 14:04:04] 2024-05-15 18:04:04,188 [wrapper] pandaids: 6206688077
[2024-05-15 14:04:04] 2024-05-15 18:04:04,480 [wrapper] cleanup: SIGTERM to supervisor_pilot  3553 68954
[2024-05-15 14:04:04] 2024-05-15 18:04:04,517 [wrapper] Test setup, not cleaning
[2024-05-15 14:04:04] 2024-05-15 18:04:04,540 [wrapper] ==== wrapper stdout END ====
[2024-05-15 14:04:04] 2024-05-15 18:04:04,581 [wrapper] ==== wrapper stderr END ====
[2024-05-15 14:04:04] 2024-05-15 18:04:04,620 [wrapper] apfmon messages muted
[2024-05-15 14:04:04]  *** Error codes and diagnostics ***
[2024-05-15 14:04:04]     "exeErrorCode": 0,
[2024-05-15 14:04:04]     "exeErrorDiag": "",
[2024-05-15 14:04:04]     "pilotErrorCode": 0,
[2024-05-15 14:04:04]     "pilotErrorDiag": "",
[2024-05-15 14:04:04]  *** Listing of results directory ***
[2024-05-15 14:04:05] total 812696
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas    467845 May 15 07:19 pilot3.tar.gz
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas      5633 May 15 07:26 queuedata.json
[2024-05-15 14:04:05] -rwx------ 1 boincer umatlas     32251 May 15 07:26 runpilot2-wrapper.sh
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas       100 May 15 11:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 14:04:05] -rwxr-xr-x 1 boincer umatlas      7986 May 15 11:06 run_atlas
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas       105 May 15 11:06 job.xml
[2024-05-15 14:04:05] -rw-r--r-- 2 boincer umatlas 596458332 May 15 11:07 EVNT.38776100._000207.pool.root.1
[2024-05-15 14:04:05] -rw-r--r-- 2 boincer umatlas     17537 May 15 11:07 start_atlas.sh
[2024-05-15 14:04:05] drwxrwx--x 2 boincer umatlas      4096 May 15 11:07 shared
[2024-05-15 14:04:05] -rw-r--r-- 2 boincer umatlas    480005 May 15 11:07 input.tar.gz
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas         0 May 15 11:07 boinc_lockfile
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas      2641 May 15 11:07 pandaJob.out
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas       424 May 15 11:07 setup.sh.local
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas   1010542 May 15 11:09 agis_schedconf.cvmfs.json
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas         0 May 15 11:09 agis_ddmendpoints.agis.ALL.json
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas   1325758 May 15 11:09 cric_ddmendpoints.json
[2024-05-15 14:04:05] drwx------ 4 boincer umatlas      4096 May 15 11:09 pilot3
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas      6302 May 15 14:00 init_data.xml
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas 229533871 May 15 14:01 HITS.38776104._005159.pool.root.1
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas       532 May 15 14:01 boinc_task_state.xml
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas      1087 May 15 14:02 memory_monitor_summary.json
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas    363661 May 15 14:02 log.38776104._005159.job.log.tgz.1
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas        95 May 15 14:03 pilot_heartbeat.json
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas      7760 May 15 14:03 heartbeat.json
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas        28 May 15 14:04 wrapper_checkpoint.txt
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas      8192 May 15 14:04 boinc_mmap_file
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas      4406 May 15 14:04 pilotlog.txt
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas    977726 May 15 14:04 log.38776104._005159.job.log.1
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas       357 May 15 14:04 output.list
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas       620 May 15 14:04 runtime_log
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas   1361920 May 15 14:04 result.tar.gz
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas     10995 May 15 14:04 runtime_log.err
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas       650 May 15 14:04 jjZMDmGxRR5n7Olcko1bjSoqABFKDmABFKDmOtvXDm7hYKDm1vn3dm.diag
[2024-05-15 14:04:05] -rw-r--r-- 1 boincer umatlas     21664 May 15 14:04 stderr.txt
[2024-05-15 14:04:05] HITS file was successfully produced:
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas 229533871 May 15 14:01 shared/HITS.pool.root.1
[2024-05-15 14:04:05]  *** Contents of shared directory: ***
[2024-05-15 14:04:05] total 808468
[2024-05-15 14:04:05] -rw-r--r-- 2 boincer umatlas 596458332 May 15 11:07 ATLAS.root_0
[2024-05-15 14:04:05] -rw-r--r-- 2 boincer umatlas     17537 May 15 11:07 start_atlas.sh
[2024-05-15 14:04:05] -rw-r--r-- 2 boincer umatlas    480005 May 15 11:07 input.tar.gz
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas 229533871 May 15 14:01 HITS.pool.root.1
[2024-05-15 14:04:05] -rw------- 1 boincer umatlas   1361920 May 15 14:04 result.tar.gz
14:04:06 (25663): run_atlas exited; CPU time 35292.811448
14:04:06 (25663): called boinc_finish(0)

</stderr_txt>
]]>

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