Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:43:06 (293809): wrapper (7.7.26015): starting
10:43:06 (293809): wrapper: running run_atlas (--nthreads 8)
[2024-05-15 10:43:06] Arguments: --nthreads 8
[2024-05-15 10:43:06] Threads: 8
[2024-05-15 10:43:06] Checking for CVMFS
[2024-05-15 10:43:07] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 10:43:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 10:43:07] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 10:43:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 10:43:09] 2.11.2.0 66440 1873 136084 132763 3 255 11972790 18432000 29019 130560 0 10393749 98.978 17520585 39619 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-15 10:43:09] CVMFS is ok
[2024-05-15 10:43:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 10:43:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 10:43:09] Further information can be found at the LHC@home message board.
[2024-05-15 10:43:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 10:43:09] Checking for apptainer binary...
[2024-05-15 10:43:09] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 10:43:09] Running /usr/bin/apptainer --version
[2024-05-15 10:43:09] apptainer version 1.3.0-1.el7
[2024-05-15 10:43:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 10:43:51] c6-12-29-2.aglt2.org
[2024-05-15 10:43:51] apptainer works
[2024-05-15 10:43:51] Set ATHENA_PROC_NUMBER=8
[2024-05-15 10:43:51] Set ATHENA_CORE_NUMBER=8
[2024-05-15 10:43:51] Starting ATLAS job with PandaID=6206688062
[2024-05-15 10:43:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 15:34:30]  *** The last 200 lines of the pilot log: ***
[2024-05-15 15:34:30] 2024-05-15 19:34:10,299 | INFO     | right removable region: 271
[2024-05-15 15:34:30] 2024-05-15 19:34:10,300 | INFO     | model: linear, x: [1715785039.0, 1715785100.0, 1715785161.0, 1715785222.0, 1715785283.0, 1715785344.0, 1715785405.0, 1715785466.0, 1715785527.0, 1715785588.0, 1715
[2024-05-15 15:34:30] 2024-05-15 19:34:10,300 | INFO     | sum of square deviations: 6240059544.4375
[2024-05-15 15:34:30] 2024-05-15 19:34:10,306 | INFO     | sum of deviations: 216737638957.24982
[2024-05-15 15:34:30] 2024-05-15 19:34:10,306 | INFO     | mean x: 1715793304.6875
[2024-05-15 15:34:30] 2024-05-15 19:34:10,306 | INFO     | mean y: 2405764.779411765
[2024-05-15 15:34:30] 2024-05-15 19:34:10,306 | INFO     | -- intersect: -59592696998.00171
[2024-05-15 15:34:30] 2024-05-15 19:34:10,306 | INFO     | intersect: -59592696998.00171
[2024-05-15 15:34:30] 2024-05-15 19:34:10,307 | INFO     | chi2: 8.87071606689336
[2024-05-15 15:34:30] 2024-05-15 19:34:10,307 | INFO     | current chi2=8.87071606689336 (change=36.629541549954695 %)
[2024-05-15 15:34:30] 2024-05-15 19:34:10,307 | INFO     | model: linear, x: [1715785344.0, 1715785405.0, 1715785466.0, 1715785527.0, 1715785588.0, 1715785649.0, 1715785710.0, 1715785771.0, 1715785832.0, 1715785893.0, 1715
[2024-05-15 15:34:30] 2024-05-15 19:34:10,308 | INFO     | sum of square deviations: 5902214399.258415
[2024-05-15 15:34:30] 2024-05-15 19:34:10,310 | INFO     | sum of deviations: 140125844760.51675
[2024-05-15 15:34:30] 2024-05-15 19:34:10,310 | INFO     | mean x: 1715793457.1910112
[2024-05-15 15:34:30] 2024-05-15 19:34:10,310 | INFO     | mean y: 2440316.382022472
[2024-05-15 15:34:30] 2024-05-15 19:34:10,310 | INFO     | -- intersect: -40732611201.51379
[2024-05-15 15:34:30] 2024-05-15 19:34:10,310 | INFO     | intersect: -40732611201.51379
[2024-05-15 15:34:30] 2024-05-15 19:34:10,311 | INFO     | chi2: 5.725877177887643
[2024-05-15 15:34:30] 2024-05-15 19:34:10,311 | INFO     | current chi2=5.725877177887643 (change=35.45191690603936 %)
[2024-05-15 15:34:30] 2024-05-15 19:34:10,312 | INFO     | model: linear, x: [1715785649.0, 1715785710.0, 1715785771.0, 1715785832.0, 1715785893.0, 1715785954.0, 1715786015.0, 1715786076.0, 1715786137.0, 1715786198.0, 1715
[2024-05-15 15:34:30] 2024-05-15 19:34:10,312 | INFO     | sum of square deviations: 5576788091.572492
[2024-05-15 15:34:30] 2024-05-15 19:34:10,324 | INFO     | sum of deviations: 79845535521.88553
[2024-05-15 15:34:30] 2024-05-15 19:34:10,324 | INFO     | mean x: 1715793609.6946564
[2024-05-15 15:34:30] 2024-05-15 19:34:10,324 | INFO     | mean y: 2468552.5610687025
[2024-05-15 15:34:30] 2024-05-15 19:34:10,324 | INFO     | -- intersect: -24563367079.265728
[2024-05-15 15:34:30] 2024-05-15 19:34:10,325 | INFO     | intersect: -24563367079.265728
[2024-05-15 15:34:30] 2024-05-15 19:34:10,325 | INFO     | chi2: 3.8871898028989054
[2024-05-15 15:34:30] 2024-05-15 19:34:10,325 | INFO     | current chi2=3.8871898028989054 (change=32.111889896790544 %)
[2024-05-15 15:34:30] 2024-05-15 19:34:10,325 | INFO     | model: linear, x: [1715785954.0, 1715786015.0, 1715786076.0, 1715786137.0, 1715786198.0, 1715786259.0, 1715786320.0, 1715786381.0, 1715786442.0, 1715786504.0, 1715
[2024-05-15 15:34:30] 2024-05-15 19:34:10,326 | INFO     | sum of square deviations: 5263548058.879409
[2024-05-15 15:34:30] 2024-05-15 19:34:10,330 | INFO     | sum of deviations: 24352743094.57976
[2024-05-15 15:34:30] 2024-05-15 19:34:10,330 | INFO     | mean x: 1715793762.1984437
[2024-05-15 15:34:30] 2024-05-15 19:34:10,330 | INFO     | mean y: 2495570.949416342
[2024-05-15 15:34:30] 2024-05-15 19:34:10,330 | INFO     | -- intersect: -7935930036.015956
[2024-05-15 15:34:30] 2024-05-15 19:34:10,330 | INFO     | intersect: -7935930036.015956
[2024-05-15 15:34:30] 2024-05-15 19:34:10,331 | INFO     | chi2: 2.340850363448781
[2024-05-15 15:34:30] 2024-05-15 19:34:10,331 | INFO     | current chi2=2.340850363448781 (change=39.780394522977204 %)
[2024-05-15 15:34:30] 2024-05-15 19:34:10,331 | INFO     | model: linear, x: [1715786259.0, 1715786320.0, 1715786381.0, 1715786442.0, 1715786504.0, 1715786564.0, 1715786625.0, 1715786686.0, 1715786747.0, 1715786808.0, 1715
[2024-05-15 15:34:30] 2024-05-15 19:34:10,331 | INFO     | sum of square deviations: 4962261738.678591
[2024-05-15 15:34:30] 2024-05-15 19:34:10,342 | INFO     | sum of deviations: -5386064538.083324
[2024-05-15 15:34:30] 2024-05-15 19:34:10,342 | INFO     | mean x: 1715793914.702381
[2024-05-15 15:34:30] 2024-05-15 19:34:10,342 | INFO     | mean y: 2510566.3055555555
[2024-05-15 15:34:30] 2024-05-15 19:34:10,343 | INFO     | -- intersect: 1864842149.221728
[2024-05-15 15:34:30] 2024-05-15 19:34:10,343 | INFO     | intersect: 1864842149.221728
[2024-05-15 15:34:30] 2024-05-15 19:34:10,343 | INFO     | chi2: 1.8363011373164673
[2024-05-15 15:34:30] 2024-05-15 19:34:10,343 | INFO     | current chi2=1.8363011373164673 (change=21.554099912177215 %)
[2024-05-15 15:34:30] 2024-05-15 19:34:10,343 | INFO     | left removable region: 50
[2024-05-15 15:34:31] 2024-05-15 19:34:10,343 | INFO     | model: linear, x: [1715787784.0, 1715787846.0, 1715787906.0, 1715787967.0, 1715788028.0, 1715788090.0, 1715788150.0, 1715788211.0, 1715788273.0, 1715788333.0, 1715
[2024-05-15 15:34:31] 2024-05-15 19:34:10,344 | INFO     | sum of square deviations: 3346988445.5746655
[2024-05-15 15:34:31] 2024-05-15 19:34:10,345 | INFO     | sum of deviations: 9962688525.24887
[2024-05-15 15:34:31] 2024-05-15 19:34:10,345 | INFO     | mean x: 1715794494.2171946
[2024-05-15 15:34:31] 2024-05-15 19:34:10,345 | INFO     | mean y: 2540267.7239819006
[2024-05-15 15:34:31] 2024-05-15 19:34:10,345 | INFO     | -- intersect: -5104715522.723742
[2024-05-15 15:34:31] 2024-05-15 19:34:10,345 | INFO     | intersect: -5104715522.723742
[2024-05-15 15:34:31] 2024-05-15 19:34:10,346 | INFO     | chi2: 0.0009234252804993724
[2024-05-15 15:34:31] 2024-05-15 19:34:10,352 | INFO     | -- intersect: -5104715522.723742
[2024-05-15 15:34:31] 2024-05-15 19:34:10,357 | INFO     | current memory leak: 2.98 B/s (using 221 data points, chi2=0.00)
[2024-05-15 15:34:31] 2024-05-15 19:34:10,357 | INFO     | ..............................
[2024-05-15 15:34:31] 2024-05-15 19:34:10,358 | INFO     | . Timing measurements:
[2024-05-15 15:34:31] 2024-05-15 19:34:10,358 | INFO     | . get job = 1 s
[2024-05-15 15:34:31] 2024-05-15 19:34:10,358 | INFO     | . initial setup = 8 s
[2024-05-15 15:34:31] 2024-05-15 19:34:10,358 | INFO     | . payload setup = 111 s
[2024-05-15 15:34:31] 2024-05-15 19:34:10,362 | INFO     | . stage-in = 0 s
[2024-05-15 15:34:31] 2024-05-15 19:34:10,362 | INFO     | . payload execution = 16952 s
[2024-05-15 15:34:31] 2024-05-15 19:34:10,362 | INFO     | . stage-out = 5 s
[2024-05-15 15:34:31] 2024-05-15 19:34:10,362 | INFO     | . log creation = 1 s
[2024-05-15 15:34:31] 2024-05-15 19:34:10,362 | INFO     | ..............................
[2024-05-15 15:34:31] 2024-05-15 19:34:11,012 | INFO     | 
[2024-05-15 15:34:31] 2024-05-15 19:34:11,013 | INFO     | job summary report
[2024-05-15 15:34:31] 2024-05-15 19:34:11,013 | INFO     | --------------------------------------------------
[2024-05-15 15:34:31] 2024-05-15 19:34:11,013 | INFO     | PanDA job id: 6206688062
[2024-05-15 15:34:31] 2024-05-15 19:34:11,013 | INFO     | task id: 38776104
[2024-05-15 15:34:31] 2024-05-15 19:34:11,013 | INFO     | errors: (none)
[2024-05-15 15:34:31] 2024-05-15 19:34:11,013 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 15:34:31] 2024-05-15 19:34:11,013 | INFO     | pilot state: finished 
[2024-05-15 15:34:31] 2024-05-15 19:34:11,013 | INFO     | transexitcode: 0
[2024-05-15 15:34:31] 2024-05-15 19:34:11,013 | INFO     | exeerrorcode: 0
[2024-05-15 15:34:31] 2024-05-15 19:34:11,013 | INFO     | exeerrordiag: 
[2024-05-15 15:34:31] 2024-05-15 19:34:11,014 | INFO     | exitcode: 0
[2024-05-15 15:34:31] 2024-05-15 19:34:11,014 | INFO     | exitmsg: OK
[2024-05-15 15:34:31] 2024-05-15 19:34:11,014 | INFO     | cpuconsumptiontime: 47046 s
[2024-05-15 15:34:31] 2024-05-15 19:34:11,014 | INFO     | nevents: 400
[2024-05-15 15:34:31] 2024-05-15 19:34:11,014 | INFO     | neventsw: 0
[2024-05-15 15:34:31] 2024-05-15 19:34:11,014 | INFO     | pid: 64253
[2024-05-15 15:34:31] 2024-05-15 19:34:11,014 | INFO     | pgrp: 64253
[2024-05-15 15:34:31] 2024-05-15 19:34:11,014 | INFO     | corecount: 8
[2024-05-15 15:34:31] 2024-05-15 19:34:11,014 | INFO     | event service: False
[2024-05-15 15:34:31] 2024-05-15 19:34:11,014 | INFO     | sizes: {0: 2395091, 1: 2396456, 2: 2396484, 3: 2396655, 4: 2396683, 14: 2396711, 26: 2396867, 37: 2396895, 48: 2396923, 59: 2396951, 66: 2397185, 69: 2397493, 1706
[2024-05-15 15:34:31] 2024-05-15 19:34:11,014 | INFO     | --------------------------------------------------
[2024-05-15 15:34:31] 2024-05-15 19:34:11,014 | INFO     | 
[2024-05-15 15:34:31] 2024-05-15 19:34:11,015 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-05-15 15:34:31] 2024-05-15 19:34:11,438 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,438 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,438 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,440 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 15:34:31] 2024-05-15 19:34:11,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,440 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 15:34:31] 2024-05-15 19:34:11,440 | INFO     | job 6206688062 has completed (purged errors)
[2024-05-15 15:34:31] 2024-05-15 19:34:11,441 | INFO     | overall cleanup function is called
[2024-05-15 15:34:31] 2024-05-15 19:34:12,465 | INFO     | --- collectZombieJob: --- 10, [64253]
[2024-05-15 15:34:31] 2024-05-15 19:34:12,465 | INFO     | zombie collector waiting for pid 64253
[2024-05-15 15:34:31] 2024-05-15 19:34:12,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 15:34:31] 2024-05-15 19:34:13,471 | INFO     | collected zombie processes
[2024-05-15 15:34:31] 2024-05-15 19:34:13,471 | INFO     | will now attempt to kill all subprocesses of pid=64253
[2024-05-15 15:34:31] 2024-05-15 19:34:13,978 | INFO     | process IDs to be killed: [64253] (in reverse order)
[2024-05-15 15:34:31] 2024-05-15 19:34:15,478 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 15:34:31] 2024-05-15 19:34:15,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 15:34:31] 2024-05-15 19:34:15,536 | INFO     | did not find any defunct processes belonging to 64253
[2024-05-15 15:34:31] 2024-05-15 19:34:15,618 | INFO     | did not find any defunct processes belonging to 64253
[2024-05-15 15:34:31] 2024-05-15 19:34:15,618 | INFO     | ready for new job
[2024-05-15 15:34:31] 2024-05-15 19:34:15,618 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 15:34:31] 2024-05-15 19:34:15,622 | INFO     | *************************************
[2024-05-15 15:34:31] 2024-05-15 19:34:15,622 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 15:34:31] 2024-05-15 19:34:15,622 | INFO     | *************************************
[2024-05-15 15:34:31] 2024-05-15 19:34:15,622 | INFO     | 
[2024-05-15 15:34:31] 2024-05-15 19:34:15,628 | INFO     | architecture information:
[2024-05-15 15:34:31] 2024-05-15 19:34:15,629 | INFO     | executing command: cat /etc/os-release
[2024-05-15 15:34:31] 2024-05-15 19:34:15,780 | INFO     | cat /etc/os-release:
[2024-05-15 15:34:31] NAME="CentOS Linux"
[2024-05-15 15:34:31] VERSION="7 (Core)"
[2024-05-15 15:34:31] ID="centos"
[2024-05-15 15:34:31] ID_LIKE="rhel fedora"
[2024-05-15 15:34:31] VERSION_ID="7"
[2024-05-15 15:34:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 15:34:31] ANSI_COLOR="0;31"
[2024-05-15 15:34:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 15:34:31] HOME_URL="https://www.centos.org/"
[2024-05-15 15:34:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 15:34:31] 
[2024-05-15 15:34:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 15:34:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 15:34:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 15:34:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 15:34:31] 
[2024-05-15 15:34:31] 2024-05-15 19:34:15,781 | INFO     | *************************************
[2024-05-15 15:34:31] 2024-05-15 19:34:15,993 | INFO     | 17269s have passed since pilot start
[2024-05-15 15:34:31] 2024-05-15 19:34:16,284 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-05-15 15:34:31] 2024-05-15 19:34:16,446 | INFO     | sufficient remaining disk space (98443460608 B)
[2024-05-15 15:34:31] 2024-05-15 19:34:16,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 15:34:31] 2024-05-15 19:34:16,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 15:34:31] 2024-05-15 19:34:16,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 15:34:31] 2024-05-15 19:34:16,591 | INFO     | all job control threads have been joined
[2024-05-15 15:34:31] 2024-05-15 19:34:16,669 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-15 15:34:31] 2024-05-15 19:34:16,669 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-15 15:34:31] 2024-05-15 19:34:16,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 15:34:31] 2024-05-15 19:34:16,669 | INFO     | will abort loop
[2024-05-15 15:34:31] 2024-05-15 19:34:16,925 | INFO     | all data control threads have been joined
[2024-05-15 15:34:31] 2024-05-15 19:34:17,000 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 15:34:31] 2024-05-15 19:34:17,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 15:34:31] 2024-05-15 19:34:17,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 15:34:31] 2024-05-15 19:34:17,452 | INFO     | [job] retrieve thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:17,456 | INFO     | [payload] validate_post thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:17,457 | INFO     | [job] queue monitor thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:17,525 | INFO     | [payload] failed_post thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:17,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 15:34:31] 2024-05-15 19:34:17,600 | INFO     | [job] control thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:17,675 | INFO     | [job] job monitor thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:17,690 | INFO     | all payload control threads have been joined
[2024-05-15 15:34:31] 2024-05-15 19:34:17,931 | INFO     | [data] control thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:17,944 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:17,950 | INFO     | [data] copytool_in thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:17,982 | INFO     | [job] validate thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:18,082 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:18,165 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:18,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 15:34:31] 2024-05-15 19:34:18,696 | INFO     | [payload] control thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:18,753 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:19,543 | INFO     | [data] copytool_out thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:22,187 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 15:34:31] 2024-05-15 19:34:23,352 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140614256195392)>', '<ExcThread(monitor, started 140613957687040)>']
[2024-05-15 15:34:31] 2024-05-15 19:34:24,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 15:34:31] 2024-05-15 19:34:24,050 | INFO     | [monitor] control thread has ended
[2024-05-15 15:34:31] 2024-05-15 19:34:28,378 | INFO     | all workflow threads have been joined
[2024-05-15 15:34:31] 2024-05-15 19:34:28,378 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 15:34:31] 2024-05-15 19:34:28,378 | INFO     | traces error code: 0
[2024-05-15 15:34:31] 2024-05-15 19:34:28,379 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 15:34:31] 2024-05-15 19:34:28,566 [wrapper] ==== pilot stdout END ====
[2024-05-15 15:34:31] 2024-05-15 19:34:28,607 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 15:34:31] 2024-05-15 19:34:28,654 [wrapper] pilotpid: 8541
[2024-05-15 15:34:31] 2024-05-15 19:34:28,709 [wrapper] Pilot exit status: 0
[2024-05-15 15:34:31] 2024-05-15 19:34:28,910 [wrapper] pandaids: 6206688062
[2024-05-15 15:34:31] 2024-05-15 19:34:29,756 [wrapper] cleanup: SIGTERM to supervisor_pilot 261384 8542
[2024-05-15 15:34:31] 2024-05-15 19:34:29,803 [wrapper] Test setup, not cleaning
[2024-05-15 15:34:31] 2024-05-15 19:34:29,846 [wrapper] ==== wrapper stdout END ====
[2024-05-15 15:34:31] 2024-05-15 19:34:29,885 [wrapper] ==== wrapper stderr END ====
[2024-05-15 15:34:31] 2024-05-15 19:34:29,965 [wrapper] apfmon messages muted
[2024-05-15 15:34:31]  *** Error codes and diagnostics ***
[2024-05-15 15:34:31]     "exeErrorCode": 0,
[2024-05-15 15:34:31]     "exeErrorDiag": "",
[2024-05-15 15:34:31]     "pilotErrorCode": 0,
[2024-05-15 15:34:31]     "pilotErrorDiag": "",
[2024-05-15 15:34:31]  *** Listing of results directory ***
[2024-05-15 15:34:31] total 820596
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas    467845 May 15 07:19 pilot3.tar.gz
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas      5633 May 15 07:21 queuedata.json
[2024-05-15 15:34:31] -rwx------ 1 boincer umatlas     32251 May 15 07:22 runpilot2-wrapper.sh
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas       100 May 15 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 15:34:31] -rwxr-xr-x 1 boincer umatlas      7986 May 15 10:42 run_atlas
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas       105 May 15 10:42 job.xml
[2024-05-15 15:34:31] -rw-r--r-- 2 boincer umatlas 601209372 May 15 10:43 EVNT.38776100._000206.pool.root.1
[2024-05-15 15:34:31] -rw-r--r-- 2 boincer umatlas     17537 May 15 10:43 start_atlas.sh
[2024-05-15 15:34:31] drwxrwx--x 2 boincer umatlas      4096 May 15 10:43 shared
[2024-05-15 15:34:31] -rw-r--r-- 2 boincer umatlas    480004 May 15 10:43 input.tar.gz
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas         0 May 15 10:43 boinc_lockfile
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas      2640 May 15 10:43 pandaJob.out
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas       424 May 15 10:44 setup.sh.local
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas   1010542 May 15 10:46 agis_schedconf.cvmfs.json
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas   1325758 May 15 10:46 cric_ddmendpoints.json
[2024-05-15 15:34:31] drwx------ 4 boincer umatlas      4096 May 15 10:46 pilot3
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas      6301 May 15 15:29 init_data.xml
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas 230970491 May 15 15:31 HITS.38776104._005144.pool.root.1
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas       532 May 15 15:31 boinc_task_state.xml
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas      1071 May 15 15:33 memory_monitor_summary.json
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas         0 May 15 15:33 agis_ddmendpoints.agis.ALL.json
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas    458248 May 15 15:33 log.38776104._005144.job.log.tgz.1
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas      8192 May 15 15:34 boinc_mmap_file
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas        28 May 15 15:34 wrapper_checkpoint.txt
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas        95 May 15 15:34 pilot_heartbeat.json
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas      7792 May 15 15:34 heartbeat.json
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas      4471 May 15 15:34 pilotlog.txt
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas   1833304 May 15 15:34 log.38776104._005144.job.log.1
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas       357 May 15 15:34 output.list
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas       620 May 15 15:34 runtime_log
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas   2314240 May 15 15:34 result.tar.gz
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas     11010 May 15 15:34 runtime_log.err
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas       651 May 15 15:34 AcuLDmItRR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmMNJKDmNwRknm.diag
[2024-05-15 15:34:31] -rw-r--r-- 1 boincer umatlas     21673 May 15 15:34 stderr.txt
[2024-05-15 15:34:31] HITS file was successfully produced:
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas 230970491 May 15 15:31 shared/HITS.pool.root.1
[2024-05-15 15:34:31]  *** Contents of shared directory: ***
[2024-05-15 15:34:31] total 815440
[2024-05-15 15:34:31] -rw-r--r-- 2 boincer umatlas 601209372 May 15 10:43 ATLAS.root_0
[2024-05-15 15:34:31] -rw-r--r-- 2 boincer umatlas     17537 May 15 10:43 start_atlas.sh
[2024-05-15 15:34:31] -rw-r--r-- 2 boincer umatlas    480004 May 15 10:43 input.tar.gz
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas 230970491 May 15 15:31 HITS.pool.root.1
[2024-05-15 15:34:31] -rw------- 1 boincer umatlas   2314240 May 15 15:34 result.tar.gz
15:34:32 (293809): run_atlas exited; CPU time 46675.321703
15:34:32 (293809): called boinc_finish(0)

</stderr_txt>
]]>

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